Query 011973
Match_columns 474
No_of_seqs 256 out of 1236
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 07:15:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011973.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011973hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 4E-153 9E-158 1217.5 35.1 451 3-473 167-619 (620)
2 PF12076 Wax2_C: WAX2 C-termin 100.0 3.8E-68 8.2E-73 486.1 11.7 164 301-469 1-164 (164)
3 COG5322 Predicted dehydrogenas 100.0 3.6E-49 7.8E-54 387.3 14.2 304 134-471 9-351 (351)
4 PRK14982 acyl-ACP reductase; P 100.0 4.1E-48 8.9E-53 395.4 14.3 300 136-471 1-338 (340)
5 COG3000 ERG3 Sterol desaturase 99.7 9.8E-18 2.1E-22 167.0 8.4 111 3-122 135-247 (271)
6 KOG0873 C-4 sterol methyl oxid 99.4 1.1E-13 2.4E-18 138.0 6.4 98 4-111 161-259 (283)
7 cd01078 NAD_bind_H4MPT_DH NADP 99.4 2.5E-12 5.5E-17 120.9 11.8 166 280-465 1-194 (194)
8 KOG0874 Sphingolipid hydroxyla 99.2 1.1E-12 2.4E-17 126.6 -1.8 102 4-114 164-268 (287)
9 KOG0872 Sterol C5 desaturase [ 99.1 2.4E-11 5.1E-16 120.6 2.1 101 6-120 171-271 (312)
10 PF04116 FA_hydroxylase: Fatty 98.2 2.7E-06 5.9E-11 72.4 5.1 78 3-89 37-114 (114)
11 PF01488 Shikimate_DH: Shikima 97.5 0.00028 6.1E-09 63.4 6.6 92 297-393 11-113 (135)
12 COG4221 Short-chain alcohol de 97.3 0.00033 7.2E-09 69.8 5.6 46 299-346 7-54 (246)
13 COG0300 DltE Short-chain dehyd 97.3 0.0003 6.4E-09 71.0 5.1 50 296-347 4-55 (265)
14 PRK00258 aroE shikimate 5-dehy 97.1 0.0014 3E-08 65.7 8.1 125 280-409 104-248 (278)
15 TIGR00507 aroE shikimate 5-deh 97.1 0.0018 4E-08 64.5 8.2 124 280-409 99-241 (270)
16 KOG1014 17 beta-hydroxysteroid 97.0 0.00055 1.2E-08 70.2 4.1 47 299-347 50-98 (312)
17 PRK00045 hemA glutamyl-tRNA re 96.9 0.0022 4.8E-08 68.1 7.0 151 296-463 180-360 (423)
18 PRK08618 ornithine cyclodeamin 96.8 0.01 2.2E-07 61.0 11.1 140 244-387 64-220 (325)
19 PLN00203 glutamyl-tRNA reducta 96.8 0.0049 1.1E-07 67.6 9.2 209 232-463 201-449 (519)
20 PF13460 NAD_binding_10: NADH( 96.7 0.0043 9.4E-08 56.6 6.6 35 301-337 1-37 (183)
21 PRK09186 flagellin modificatio 96.6 0.0046 9.9E-08 59.1 6.6 44 298-343 4-49 (256)
22 cd01065 NAD_bind_Shikimate_DH 96.5 0.011 2.3E-07 53.0 7.9 123 281-408 2-142 (155)
23 COG0169 AroE Shikimate 5-dehyd 96.5 0.0071 1.5E-07 61.6 7.3 171 236-426 72-267 (283)
24 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.0084 1.8E-07 56.5 6.8 85 284-393 28-120 (168)
25 PRK12549 shikimate 5-dehydroge 96.4 0.011 2.4E-07 59.9 7.8 127 280-409 109-254 (284)
26 TIGR02853 spore_dpaA dipicolin 96.3 0.025 5.3E-07 57.5 10.1 125 240-389 108-241 (287)
27 PLN03209 translocon at the inn 96.2 0.014 3.1E-07 64.7 8.4 59 282-342 59-124 (576)
28 PRK06407 ornithine cyclodeamin 96.2 0.036 7.7E-07 56.7 10.4 132 244-388 62-212 (301)
29 PF02423 OCD_Mu_crystall: Orni 96.2 0.031 6.7E-07 57.3 10.0 140 243-389 64-225 (313)
30 TIGR02371 ala_DH_arch alanine 96.2 0.059 1.3E-06 55.6 12.0 140 243-389 64-223 (325)
31 PRK13940 glutamyl-tRNA reducta 96.2 0.008 1.7E-07 64.1 5.8 210 230-464 116-354 (414)
32 PRK12548 shikimate 5-dehydroge 96.1 0.02 4.3E-07 58.0 7.9 62 280-344 108-175 (289)
33 CHL00194 ycf39 Ycf39; Provisio 96.1 0.018 3.8E-07 58.0 7.6 61 300-381 2-64 (317)
34 PRK07340 ornithine cyclodeamin 96.1 0.054 1.2E-06 55.3 11.0 138 244-389 62-218 (304)
35 PLN02434 fatty acid hydroxylas 96.0 0.011 2.4E-07 58.9 5.8 32 81-112 198-230 (237)
36 PRK08063 enoyl-(acyl carrier p 96.0 0.016 3.4E-07 55.2 6.3 42 299-342 5-49 (250)
37 PRK06196 oxidoreductase; Provi 95.9 0.015 3.3E-07 58.3 6.5 56 286-343 14-71 (315)
38 cd05213 NAD_bind_Glutamyl_tRNA 95.9 0.013 2.7E-07 59.9 5.7 148 230-393 113-277 (311)
39 PRK06949 short chain dehydroge 95.9 0.016 3.5E-07 55.4 5.9 47 294-342 5-53 (258)
40 PRK08339 short chain dehydroge 95.8 0.019 4.2E-07 56.1 6.4 45 298-344 8-54 (263)
41 PRK08306 dipicolinate synthase 95.8 0.034 7.3E-07 56.7 8.3 87 297-392 151-244 (296)
42 PLN02780 ketoreductase/ oxidor 95.8 0.012 2.7E-07 59.9 5.0 45 298-344 53-99 (320)
43 PRK12429 3-hydroxybutyrate deh 95.7 0.022 4.7E-07 54.3 6.3 43 299-343 5-49 (258)
44 PRK07454 short chain dehydroge 95.7 0.023 4.9E-07 54.1 6.4 44 298-343 6-51 (241)
45 PRK06141 ornithine cyclodeamin 95.7 0.09 1.9E-06 53.9 11.1 138 244-388 62-219 (314)
46 PRK06482 short chain dehydroge 95.7 0.019 4.1E-07 56.0 5.7 44 299-344 3-48 (276)
47 PRK07231 fabG 3-ketoacyl-(acyl 95.7 0.03 6.5E-07 53.1 7.0 44 298-343 5-50 (251)
48 PRK07478 short chain dehydroge 95.7 0.025 5.4E-07 54.4 6.3 44 298-343 6-51 (254)
49 PRK06046 alanine dehydrogenase 95.7 0.11 2.3E-06 53.6 11.3 141 243-389 65-224 (326)
50 PRK05867 short chain dehydroge 95.6 0.017 3.7E-07 55.6 5.0 45 297-343 8-54 (253)
51 PRK06101 short chain dehydroge 95.6 0.02 4.2E-07 54.9 5.3 41 299-341 2-44 (240)
52 PRK06823 ornithine cyclodeamin 95.6 0.14 3E-06 52.8 11.8 138 244-388 64-222 (315)
53 PRK08265 short chain dehydroge 95.6 0.02 4.3E-07 55.7 5.4 44 298-343 6-51 (261)
54 PRK06924 short chain dehydroge 95.6 0.031 6.7E-07 53.4 6.6 41 299-341 2-45 (251)
55 PRK14175 bifunctional 5,10-met 95.5 0.037 8.1E-07 56.6 7.3 90 286-400 141-244 (286)
56 PRK06194 hypothetical protein; 95.5 0.029 6.2E-07 54.9 6.3 43 299-343 7-51 (287)
57 COG1086 Predicted nucleoside-d 95.5 0.071 1.5E-06 59.0 9.8 123 237-381 169-323 (588)
58 PRK08643 acetoin reductase; Va 95.5 0.03 6.6E-07 53.7 6.3 43 299-343 3-47 (256)
59 TIGR01809 Shik-DH-AROM shikima 95.5 0.044 9.5E-07 55.4 7.6 127 280-409 105-258 (282)
60 PF00670 AdoHcyase_NAD: S-aden 95.5 0.041 8.8E-07 52.0 6.8 88 297-393 22-115 (162)
61 PRK08251 short chain dehydroge 95.5 0.04 8.6E-07 52.5 6.9 44 299-344 3-48 (248)
62 PRK07523 gluconate 5-dehydroge 95.4 0.023 4.9E-07 54.7 5.2 45 297-343 9-55 (255)
63 PRK07109 short chain dehydroge 95.4 0.031 6.7E-07 57.2 6.5 45 297-343 7-53 (334)
64 TIGR01035 hemA glutamyl-tRNA r 95.4 0.043 9.2E-07 58.5 7.7 151 297-463 179-357 (417)
65 PF03446 NAD_binding_2: NAD bi 95.4 0.012 2.6E-07 54.2 3.1 102 299-410 2-124 (163)
66 TIGR00518 alaDH alanine dehydr 95.4 0.079 1.7E-06 55.7 9.5 92 298-393 167-271 (370)
67 PRK09291 short chain dehydroge 95.4 0.048 1E-06 52.1 7.2 41 299-341 3-45 (257)
68 PRK07063 short chain dehydroge 95.4 0.022 4.7E-07 54.9 4.9 45 298-344 7-53 (260)
69 PRK07825 short chain dehydroge 95.4 0.026 5.5E-07 55.0 5.4 44 298-343 5-50 (273)
70 PRK07589 ornithine cyclodeamin 95.3 0.13 2.8E-06 53.9 10.8 139 243-388 65-225 (346)
71 PRK07024 short chain dehydroge 95.3 0.031 6.8E-07 54.0 5.7 44 299-344 3-48 (257)
72 PRK07890 short chain dehydroge 95.3 0.025 5.3E-07 54.2 5.0 44 298-343 5-50 (258)
73 PRK05854 short chain dehydroge 95.3 0.024 5.3E-07 57.2 5.1 44 298-343 14-59 (313)
74 PRK08267 short chain dehydroge 95.2 0.03 6.5E-07 54.0 5.4 43 299-343 2-46 (260)
75 TIGR01963 PHB_DH 3-hydroxybuty 95.2 0.025 5.4E-07 53.8 4.8 42 299-342 2-45 (255)
76 PLN02986 cinnamyl-alcohol dehy 95.2 0.04 8.6E-07 55.1 6.4 38 299-338 6-45 (322)
77 TIGR02415 23BDH acetoin reduct 95.2 0.042 9.1E-07 52.4 6.2 43 299-343 1-45 (254)
78 PRK06500 short chain dehydroge 95.2 0.035 7.5E-07 52.8 5.6 44 298-343 6-51 (249)
79 PRK07774 short chain dehydroge 95.2 0.045 9.7E-07 52.1 6.3 44 298-343 6-51 (250)
80 PRK07067 sorbitol dehydrogenas 95.2 0.034 7.3E-07 53.5 5.5 44 298-343 6-51 (257)
81 PRK07326 short chain dehydroge 95.2 0.03 6.6E-07 52.8 5.1 45 298-344 6-52 (237)
82 PRK08340 glucose-1-dehydrogena 95.1 0.029 6.4E-07 54.2 5.0 43 300-344 2-46 (259)
83 PRK12826 3-ketoacyl-(acyl-carr 95.1 0.045 9.7E-07 51.8 6.1 44 298-343 6-51 (251)
84 PRK14192 bifunctional 5,10-met 95.1 0.12 2.6E-06 52.7 9.5 122 231-392 107-234 (283)
85 PRK07097 gluconate 5-dehydroge 95.1 0.05 1.1E-06 52.8 6.6 49 293-343 5-55 (265)
86 PRK08085 gluconate 5-dehydroge 95.1 0.033 7.2E-07 53.5 5.3 45 297-343 8-54 (254)
87 COG0702 Predicted nucleoside-d 95.1 0.046 1E-06 52.4 6.2 38 300-339 2-41 (275)
88 PLN02968 Probable N-acetyl-gam 95.1 0.036 7.8E-07 58.6 5.9 138 297-442 37-196 (381)
89 PRK05993 short chain dehydroge 95.1 0.035 7.5E-07 54.6 5.4 41 299-341 5-47 (277)
90 PRK05653 fabG 3-ketoacyl-(acyl 95.1 0.051 1.1E-06 51.0 6.3 42 299-342 6-49 (246)
91 PF02719 Polysacc_synt_2: Poly 95.1 0.027 5.9E-07 57.8 4.7 78 301-388 1-86 (293)
92 PRK05884 short chain dehydroge 95.1 0.035 7.5E-07 53.1 5.2 41 300-342 2-44 (223)
93 PRK05872 short chain dehydroge 95.1 0.035 7.7E-07 55.3 5.4 46 297-344 8-55 (296)
94 PRK06199 ornithine cyclodeamin 95.1 0.18 3.9E-06 53.4 10.9 155 244-404 92-278 (379)
95 PRK06200 2,3-dihydroxy-2,3-dih 95.1 0.038 8.3E-07 53.5 5.5 45 298-344 6-52 (263)
96 TIGR03325 BphB_TodD cis-2,3-di 95.0 0.039 8.5E-07 53.5 5.6 43 298-342 5-49 (262)
97 PRK08017 oxidoreductase; Provi 95.0 0.037 8.1E-07 52.9 5.3 40 299-340 3-44 (256)
98 PRK07831 short chain dehydroge 95.0 0.057 1.2E-06 52.2 6.5 45 298-343 17-63 (262)
99 PLN02896 cinnamyl-alcohol dehy 95.0 0.078 1.7E-06 54.0 7.8 49 292-342 4-54 (353)
100 PRK06197 short chain dehydroge 95.0 0.053 1.1E-06 54.1 6.4 44 297-342 15-60 (306)
101 PRK07062 short chain dehydroge 95.0 0.034 7.5E-07 53.7 4.9 46 297-344 7-54 (265)
102 cd05212 NAD_bind_m-THF_DH_Cycl 95.0 0.095 2.1E-06 48.2 7.5 74 293-392 23-103 (140)
103 PRK12829 short chain dehydroge 94.9 0.041 9E-07 52.7 5.4 45 297-343 10-56 (264)
104 KOG1370 S-adenosylhomocysteine 94.9 0.072 1.6E-06 55.3 7.2 151 298-458 214-395 (434)
105 PRK06124 gluconate 5-dehydroge 94.9 0.041 8.8E-07 52.8 5.3 46 296-343 9-56 (256)
106 PRK05866 short chain dehydroge 94.9 0.035 7.6E-07 55.5 5.0 44 298-343 40-85 (293)
107 KOG1208 Dehydrogenases with di 94.9 0.034 7.4E-07 57.4 5.0 53 290-344 27-81 (314)
108 PRK06947 glucose-1-dehydrogena 94.9 0.058 1.2E-06 51.4 6.2 42 299-342 3-47 (248)
109 PRK07102 short chain dehydroge 94.9 0.059 1.3E-06 51.4 6.3 42 299-342 2-45 (243)
110 PRK08416 7-alpha-hydroxysteroi 94.9 0.061 1.3E-06 52.2 6.4 44 298-343 8-54 (260)
111 PRK06139 short chain dehydroge 94.9 0.037 8E-07 56.8 5.1 44 298-343 7-52 (330)
112 PRK06180 short chain dehydroge 94.9 0.046 9.9E-07 53.6 5.6 43 298-342 4-48 (277)
113 PLN02253 xanthoxin dehydrogena 94.8 0.065 1.4E-06 52.3 6.5 45 298-344 18-64 (280)
114 PRK05717 oxidoreductase; Valid 94.8 0.058 1.3E-06 51.9 6.1 45 297-343 9-55 (255)
115 PRK12746 short chain dehydroge 94.8 0.068 1.5E-06 51.1 6.4 43 298-342 6-51 (254)
116 COG0373 HemA Glutamyl-tRNA red 94.8 0.076 1.7E-06 56.9 7.3 89 297-393 177-278 (414)
117 PRK06057 short chain dehydroge 94.8 0.051 1.1E-06 52.3 5.5 44 298-343 7-52 (255)
118 PF00106 adh_short: short chai 94.8 0.04 8.6E-07 49.2 4.5 43 299-343 1-48 (167)
119 PRK05557 fabG 3-ketoacyl-(acyl 94.8 0.075 1.6E-06 50.0 6.5 43 298-342 5-50 (248)
120 PRK09135 pteridine reductase; 94.8 0.078 1.7E-06 50.1 6.6 43 298-342 6-51 (249)
121 PRK10538 malonic semialdehyde 94.7 0.052 1.1E-06 52.2 5.5 42 300-343 2-45 (248)
122 COG2910 Putative NADH-flavin r 94.7 0.066 1.4E-06 52.0 6.0 140 300-444 2-201 (211)
123 PRK09072 short chain dehydroge 94.7 0.067 1.5E-06 51.7 6.3 43 298-342 5-49 (263)
124 PRK08213 gluconate 5-dehydroge 94.7 0.046 9.9E-07 52.7 5.0 43 298-342 12-56 (259)
125 COG2423 Predicted ornithine cy 94.7 0.19 4E-06 52.5 9.7 158 242-406 65-251 (330)
126 PRK05875 short chain dehydroge 94.7 0.054 1.2E-06 52.7 5.5 44 297-342 6-51 (276)
127 PRK12828 short chain dehydroge 94.7 0.049 1.1E-06 51.0 5.0 42 298-341 7-50 (239)
128 PRK06182 short chain dehydroge 94.7 0.056 1.2E-06 52.7 5.6 41 298-340 3-45 (273)
129 PRK08862 short chain dehydroge 94.7 0.046 9.9E-07 52.8 4.9 43 298-342 5-49 (227)
130 TIGR01472 gmd GDP-mannose 4,6- 94.7 0.06 1.3E-06 54.6 5.9 29 299-329 1-29 (343)
131 PRK08703 short chain dehydroge 94.6 0.048 1E-06 51.9 5.0 44 298-343 6-51 (239)
132 PF05368 NmrA: NmrA-like famil 94.6 0.065 1.4E-06 51.2 5.8 39 301-341 1-43 (233)
133 PRK05876 short chain dehydroge 94.6 0.047 1E-06 53.9 5.0 44 298-343 6-51 (275)
134 PRK12742 oxidoreductase; Provi 94.6 0.06 1.3E-06 50.8 5.5 43 298-342 6-51 (237)
135 PRK07074 short chain dehydroge 94.6 0.06 1.3E-06 51.7 5.5 43 299-343 3-47 (257)
136 PTZ00075 Adenosylhomocysteinas 94.5 0.17 3.6E-06 55.3 9.3 143 295-447 251-419 (476)
137 PRK07453 protochlorophyllide o 94.5 0.055 1.2E-06 54.4 5.3 44 298-343 6-51 (322)
138 PRK12550 shikimate 5-dehydroge 94.5 0.11 2.5E-06 52.5 7.4 120 280-409 105-243 (272)
139 PRK07035 short chain dehydroge 94.5 0.057 1.2E-06 51.7 5.0 44 298-343 8-53 (252)
140 PRK12939 short chain dehydroge 94.5 0.062 1.3E-06 50.9 5.3 43 298-342 7-51 (250)
141 PRK06138 short chain dehydroge 94.4 0.079 1.7E-06 50.4 5.9 44 298-343 5-50 (252)
142 PRK08263 short chain dehydroge 94.4 0.07 1.5E-06 52.2 5.7 43 299-343 4-48 (275)
143 PRK06172 short chain dehydroge 94.4 0.058 1.3E-06 51.7 5.0 43 298-342 7-51 (253)
144 PRK12936 3-ketoacyl-(acyl-carr 94.4 0.074 1.6E-06 50.3 5.5 44 298-343 6-51 (245)
145 PLN02662 cinnamyl-alcohol dehy 94.4 0.072 1.6E-06 52.9 5.7 34 299-334 5-40 (322)
146 PRK12384 sorbitol-6-phosphate 94.4 0.063 1.4E-06 51.6 5.1 43 299-343 3-47 (259)
147 TIGR01500 sepiapter_red sepiap 94.4 0.097 2.1E-06 50.6 6.4 43 300-344 2-50 (256)
148 PRK12749 quinate/shikimate deh 94.4 0.15 3.2E-06 52.0 8.0 125 280-409 106-260 (288)
149 PRK08177 short chain dehydroge 94.4 0.061 1.3E-06 50.9 4.9 40 299-340 2-43 (225)
150 PRK07832 short chain dehydroge 94.4 0.061 1.3E-06 52.5 5.0 43 299-343 1-45 (272)
151 PRK07677 short chain dehydroge 94.3 0.062 1.3E-06 51.7 5.0 43 299-343 2-46 (252)
152 PRK13394 3-hydroxybutyrate deh 94.3 0.063 1.4E-06 51.4 4.9 43 298-342 7-51 (262)
153 PRK06125 short chain dehydroge 94.3 0.07 1.5E-06 51.5 5.3 45 298-344 7-53 (259)
154 PRK08945 putative oxoacyl-(acy 94.3 0.057 1.2E-06 51.6 4.6 45 297-343 11-57 (247)
155 PRK14027 quinate/shikimate deh 94.3 0.18 3.9E-06 51.3 8.4 62 280-344 109-173 (283)
156 PRK05786 fabG 3-ketoacyl-(acyl 94.3 0.075 1.6E-06 50.2 5.4 44 298-343 5-50 (238)
157 PRK06935 2-deoxy-D-gluconate 3 94.3 0.066 1.4E-06 51.7 5.1 44 296-342 13-58 (258)
158 PRK05599 hypothetical protein; 94.3 0.059 1.3E-06 52.1 4.7 42 300-344 2-45 (246)
159 PRK08277 D-mannonate oxidoredu 94.2 0.068 1.5E-06 52.2 5.0 44 298-343 10-55 (278)
160 PRK05693 short chain dehydroge 94.2 0.077 1.7E-06 51.7 5.4 41 299-341 2-44 (274)
161 PRK08589 short chain dehydroge 94.2 0.068 1.5E-06 52.4 5.0 43 298-343 6-50 (272)
162 PRK06914 short chain dehydroge 94.2 0.083 1.8E-06 51.5 5.5 42 299-342 4-47 (280)
163 PRK05650 short chain dehydroge 94.1 0.071 1.5E-06 51.9 5.0 41 300-342 2-44 (270)
164 PRK06953 short chain dehydroge 94.1 0.078 1.7E-06 50.1 5.1 40 299-340 2-43 (222)
165 PRK07814 short chain dehydroge 94.1 0.08 1.7E-06 51.4 5.3 45 297-343 9-55 (263)
166 TIGR00561 pntA NAD(P) transhyd 94.1 0.17 3.6E-06 55.8 8.2 181 241-443 104-337 (511)
167 PRK07806 short chain dehydroge 94.1 0.12 2.5E-06 49.3 6.3 43 298-342 6-51 (248)
168 PRK09242 tropinone reductase; 94.1 0.076 1.7E-06 51.1 5.0 44 298-343 9-54 (257)
169 PRK07060 short chain dehydroge 94.0 0.11 2.4E-06 49.2 5.9 45 296-342 7-53 (245)
170 PRK00066 ldh L-lactate dehydro 94.0 0.055 1.2E-06 55.7 4.1 68 296-366 4-79 (315)
171 TIGR02992 ectoine_eutC ectoine 94.0 0.16 3.5E-06 52.3 7.5 88 295-388 126-224 (326)
172 TIGR03589 PseB UDP-N-acetylglu 94.0 0.15 3.2E-06 51.8 7.1 42 299-342 5-50 (324)
173 KOG1205 Predicted dehydrogenas 94.0 0.055 1.2E-06 55.3 4.0 44 297-342 11-56 (282)
174 PRK07069 short chain dehydroge 94.0 0.12 2.6E-06 49.1 6.1 41 301-343 2-45 (251)
175 TIGR01289 LPOR light-dependent 94.0 0.089 1.9E-06 53.2 5.5 44 298-343 3-49 (314)
176 PRK14179 bifunctional 5,10-met 94.0 0.086 1.9E-06 53.9 5.3 91 285-401 140-245 (284)
177 PLN02583 cinnamoyl-CoA reducta 93.9 0.18 3.8E-06 50.4 7.5 31 297-329 5-35 (297)
178 PRK05476 S-adenosyl-L-homocyst 93.9 0.33 7.2E-06 52.3 9.9 138 295-444 209-373 (425)
179 TIGR03206 benzo_BadH 2-hydroxy 93.9 0.11 2.3E-06 49.4 5.6 43 298-342 3-47 (250)
180 PLN02650 dihydroflavonol-4-red 93.9 0.12 2.7E-06 52.4 6.4 42 297-340 4-47 (351)
181 PF01210 NAD_Gly3P_dh_N: NAD-d 93.9 0.17 3.8E-06 46.4 6.8 39 300-341 1-41 (157)
182 PRK07666 fabG 3-ketoacyl-(acyl 93.9 0.089 1.9E-06 49.9 5.0 43 298-342 7-51 (239)
183 PRK08690 enoyl-(acyl carrier p 93.9 0.098 2.1E-06 51.1 5.4 32 298-329 6-37 (261)
184 PRK07775 short chain dehydroge 93.8 0.11 2.3E-06 51.1 5.6 44 297-342 9-54 (274)
185 PRK12825 fabG 3-ketoacyl-(acyl 93.8 0.1 2.2E-06 48.9 5.3 42 298-341 6-50 (249)
186 PRK07904 short chain dehydroge 93.8 0.084 1.8E-06 51.4 4.8 45 298-344 8-56 (253)
187 PRK07533 enoyl-(acyl carrier p 93.7 0.12 2.7E-06 50.2 5.8 47 297-343 9-60 (258)
188 PLN00198 anthocyanidin reducta 93.7 0.17 3.6E-06 51.1 6.9 42 294-337 5-48 (338)
189 PRK08642 fabG 3-ketoacyl-(acyl 93.7 0.12 2.6E-06 49.2 5.6 44 298-343 5-51 (253)
190 PF01118 Semialdhyde_dh: Semia 93.7 0.12 2.6E-06 45.3 5.2 98 300-402 1-109 (121)
191 PRK08303 short chain dehydroge 93.7 0.13 2.8E-06 52.1 6.0 44 298-343 8-63 (305)
192 PRK06505 enoyl-(acyl carrier p 93.7 0.12 2.5E-06 51.1 5.6 35 298-332 7-43 (271)
193 PRK06113 7-alpha-hydroxysteroi 93.7 0.11 2.3E-06 50.1 5.2 44 297-342 10-55 (255)
194 PRK06997 enoyl-(acyl carrier p 93.6 0.11 2.4E-06 50.8 5.3 46 298-343 6-56 (260)
195 PRK06181 short chain dehydroge 93.6 0.096 2.1E-06 50.5 4.8 43 299-343 2-46 (263)
196 PRK08264 short chain dehydroge 93.6 0.094 2E-06 49.7 4.7 38 298-337 6-46 (238)
197 PLN00141 Tic62-NAD(P)-related 93.6 0.1 2.2E-06 50.6 5.0 39 298-338 17-57 (251)
198 PRK14190 bifunctional 5,10-met 93.6 0.14 3.1E-06 52.3 6.2 91 285-401 140-245 (284)
199 PRK06484 short chain dehydroge 93.6 0.12 2.5E-06 55.4 5.9 46 297-344 268-315 (520)
200 PRK09134 short chain dehydroge 93.5 0.19 4.1E-06 48.5 6.7 44 297-342 8-54 (258)
201 PRK08291 ectoine utilization p 93.5 0.25 5.3E-06 51.0 7.9 88 295-388 129-227 (330)
202 PRK07576 short chain dehydroge 93.5 0.11 2.4E-06 50.6 5.1 45 297-343 8-54 (264)
203 PRK08278 short chain dehydroge 93.5 0.14 3.1E-06 50.2 5.9 34 298-333 6-41 (273)
204 PRK14178 bifunctional 5,10-met 93.5 0.21 4.7E-06 51.0 7.2 84 285-392 134-227 (279)
205 PRK12827 short chain dehydroge 93.5 0.19 4E-06 47.5 6.5 43 298-342 6-54 (249)
206 PF02826 2-Hacid_dh_C: D-isome 93.5 0.23 4.9E-06 46.6 6.9 86 297-393 35-135 (178)
207 PRK06841 short chain dehydroge 93.5 0.14 3E-06 49.0 5.6 36 297-334 14-51 (255)
208 PRK08415 enoyl-(acyl carrier p 93.4 0.14 3E-06 50.9 5.7 46 298-343 5-55 (274)
209 PRK08219 short chain dehydroge 93.3 0.12 2.7E-06 48.1 4.9 41 299-342 4-46 (227)
210 PF10520 Kua-UEV1_localn: Kua- 93.3 0.057 1.2E-06 51.8 2.6 54 53-109 102-156 (178)
211 TIGR01832 kduD 2-deoxy-D-gluco 93.3 0.12 2.6E-06 49.2 4.9 31 297-329 4-34 (248)
212 PRK00676 hemA glutamyl-tRNA re 93.3 0.14 3.1E-06 53.5 5.7 91 230-332 110-208 (338)
213 TIGR02685 pter_reduc_Leis pter 93.3 0.14 3E-06 49.9 5.3 43 299-343 2-47 (267)
214 PRK12743 oxidoreductase; Provi 93.3 0.13 2.9E-06 49.6 5.1 43 299-343 3-48 (256)
215 PLN02427 UDP-apiose/xylose syn 93.2 0.24 5.2E-06 51.2 7.3 44 294-339 10-56 (386)
216 PRK08594 enoyl-(acyl carrier p 93.2 0.15 3.2E-06 49.9 5.4 46 298-343 7-57 (257)
217 PLN02730 enoyl-[acyl-carrier-p 93.2 0.14 3E-06 52.4 5.4 47 297-343 8-55 (303)
218 PLN02989 cinnamyl-alcohol dehy 93.2 0.19 4.1E-06 50.2 6.3 39 298-338 5-45 (325)
219 PRK08628 short chain dehydroge 93.2 0.14 3E-06 49.2 5.1 43 296-341 5-49 (258)
220 PRK06128 oxidoreductase; Provi 93.1 0.19 4E-06 50.2 6.0 43 298-342 55-101 (300)
221 PF02737 3HCDH_N: 3-hydroxyacy 93.1 0.19 4.1E-06 47.5 5.7 39 300-341 1-41 (180)
222 PRK07819 3-hydroxybutyryl-CoA 93.0 0.1 2.2E-06 52.7 4.1 88 299-389 6-122 (286)
223 PRK06179 short chain dehydroge 93.0 0.12 2.6E-06 50.1 4.5 35 299-335 5-41 (270)
224 PRK06463 fabG 3-ketoacyl-(acyl 93.0 0.16 3.5E-06 48.9 5.3 41 298-340 7-50 (255)
225 PRK06603 enoyl-(acyl carrier p 93.0 0.16 3.6E-06 49.5 5.4 44 299-342 9-57 (260)
226 PRK14194 bifunctional 5,10-met 93.0 0.24 5.1E-06 51.2 6.7 80 286-392 142-234 (301)
227 PRK12937 short chain dehydroge 92.9 0.16 3.4E-06 48.1 5.0 43 298-342 5-50 (245)
228 PRK08217 fabG 3-ketoacyl-(acyl 92.9 0.16 3.4E-06 48.1 5.0 44 298-343 5-50 (253)
229 PRK14189 bifunctional 5,10-met 92.9 0.21 4.6E-06 51.1 6.2 89 286-400 141-244 (285)
230 PLN02214 cinnamoyl-CoA reducta 92.9 0.23 5E-06 50.8 6.6 35 298-334 10-46 (342)
231 COG0451 WcaG Nucleoside-diphos 92.9 0.094 2E-06 51.3 3.5 101 300-436 2-108 (314)
232 COG1748 LYS9 Saccharopine dehy 92.9 0.19 4E-06 53.6 5.9 88 299-389 2-100 (389)
233 PRK12747 short chain dehydroge 92.8 0.16 3.4E-06 48.7 5.0 43 298-342 4-49 (252)
234 PRK07041 short chain dehydroge 92.8 0.14 3E-06 48.2 4.5 40 302-343 1-42 (230)
235 PRK14185 bifunctional 5,10-met 92.8 0.66 1.4E-05 47.8 9.6 140 227-392 42-236 (293)
236 PRK07370 enoyl-(acyl carrier p 92.8 0.14 3.1E-06 49.9 4.7 32 298-329 6-37 (258)
237 PRK06123 short chain dehydroge 92.7 0.18 3.8E-06 48.0 5.1 42 299-342 3-47 (248)
238 KOG1502 Flavonol reductase/cin 92.7 0.14 3E-06 53.4 4.6 39 297-337 5-45 (327)
239 PRK08936 glucose-1-dehydrogena 92.7 0.17 3.8E-06 48.8 5.0 44 297-342 6-52 (261)
240 PRK07984 enoyl-(acyl carrier p 92.6 0.21 4.6E-06 49.2 5.5 32 298-329 6-37 (262)
241 PRK07985 oxidoreductase; Provi 92.5 0.19 4.1E-06 50.2 5.2 43 298-342 49-95 (294)
242 PRK12935 acetoacetyl-CoA reduc 92.5 0.18 4E-06 47.9 4.9 44 298-343 6-52 (247)
243 PRK06484 short chain dehydroge 92.5 0.22 4.7E-06 53.4 5.9 47 297-345 4-52 (520)
244 PRK09260 3-hydroxybutyryl-CoA 92.5 0.24 5.2E-06 49.7 5.9 92 299-393 2-123 (288)
245 PRK05565 fabG 3-ketoacyl-(acyl 92.4 0.23 5E-06 46.8 5.4 43 298-342 5-50 (247)
246 PRK07889 enoyl-(acyl carrier p 92.4 0.22 4.8E-06 48.5 5.4 47 298-344 7-57 (256)
247 PRK12823 benD 1,6-dihydroxycyc 92.4 0.19 4.2E-06 48.3 4.9 42 298-342 8-51 (260)
248 cd01076 NAD_bind_1_Glu_DH NAD( 92.4 0.93 2E-05 44.7 9.7 29 297-328 30-58 (227)
249 PRK09496 trkA potassium transp 92.3 0.82 1.8E-05 48.2 9.9 44 296-342 229-274 (453)
250 PRK09730 putative NAD(P)-bindi 92.3 0.21 4.5E-06 47.3 5.0 42 299-342 2-46 (247)
251 PRK06483 dihydromonapterin red 92.3 0.23 5.1E-06 47.1 5.3 35 298-334 2-38 (236)
252 PRK14193 bifunctional 5,10-met 92.3 0.24 5.1E-06 50.8 5.6 103 286-414 141-264 (284)
253 PLN02494 adenosylhomocysteinas 92.2 1.4 3E-05 48.3 11.6 156 277-445 232-418 (477)
254 PF03435 Saccharop_dh: Sacchar 92.2 0.22 4.8E-06 51.8 5.4 85 301-388 1-98 (386)
255 PRK12481 2-deoxy-D-gluconate 3 92.1 0.2 4.3E-06 48.5 4.7 31 297-329 7-37 (251)
256 PRK08159 enoyl-(acyl carrier p 92.1 0.26 5.7E-06 48.6 5.6 46 298-343 10-60 (272)
257 TIGR03649 ergot_EASG ergot alk 92.1 0.13 2.8E-06 50.6 3.4 33 300-334 1-35 (285)
258 PRK15181 Vi polysaccharide bio 92.0 0.35 7.5E-06 49.5 6.5 31 297-329 14-44 (348)
259 PRK06720 hypothetical protein; 92.0 0.27 5.8E-06 46.0 5.2 44 297-342 15-60 (169)
260 PF01262 AlaDh_PNT_C: Alanine 92.0 0.26 5.5E-06 45.8 5.0 92 298-393 20-143 (168)
261 PRK06114 short chain dehydroge 92.0 0.28 6.1E-06 47.3 5.5 44 297-342 7-53 (254)
262 PRK06079 enoyl-(acyl carrier p 92.0 0.26 5.6E-06 47.8 5.2 44 298-342 7-52 (252)
263 PRK06198 short chain dehydroge 91.9 0.23 5E-06 47.7 4.8 43 298-342 6-51 (260)
264 PRK14191 bifunctional 5,10-met 91.9 0.33 7.2E-06 49.7 6.1 92 285-400 139-243 (285)
265 cd01075 NAD_bind_Leu_Phe_Val_D 91.9 1 2.2E-05 43.4 9.1 84 297-388 27-115 (200)
266 PRK14170 bifunctional 5,10-met 91.9 0.31 6.6E-06 50.0 5.9 81 286-392 140-232 (284)
267 PRK14187 bifunctional 5,10-met 91.9 0.27 5.9E-06 50.6 5.5 81 286-392 143-235 (294)
268 PRK15461 NADH-dependent gamma- 91.9 0.2 4.4E-06 50.6 4.6 102 300-411 3-126 (296)
269 PRK07577 short chain dehydroge 91.9 0.19 4.2E-06 47.3 4.1 33 299-333 4-38 (234)
270 PRK07856 short chain dehydroge 91.9 0.21 4.5E-06 48.1 4.4 36 297-334 5-42 (252)
271 PLN02686 cinnamoyl-CoA reducta 91.8 0.27 5.8E-06 51.0 5.5 42 296-339 51-94 (367)
272 PRK12745 3-ketoacyl-(acyl-carr 91.8 0.29 6.2E-06 46.8 5.3 41 299-341 3-46 (256)
273 TIGR02632 RhaD_aldol-ADH rhamn 91.8 0.33 7.2E-06 54.9 6.6 44 298-343 414-459 (676)
274 PRK05855 short chain dehydroge 91.7 0.25 5.4E-06 52.8 5.3 45 297-343 314-360 (582)
275 TIGR01831 fabG_rel 3-oxoacyl-( 91.7 0.21 4.6E-06 47.3 4.2 40 301-342 1-43 (239)
276 PRK08226 short chain dehydroge 91.7 0.33 7.2E-06 46.7 5.6 34 298-333 6-41 (263)
277 KOG0725 Reductases with broad 91.7 0.29 6.2E-06 49.4 5.3 45 297-343 7-53 (270)
278 PRK07792 fabG 3-ketoacyl-(acyl 91.6 0.31 6.6E-06 49.0 5.5 45 297-343 11-58 (306)
279 PRK08993 2-deoxy-D-gluconate 3 91.6 0.25 5.5E-06 47.6 4.8 33 295-329 7-39 (253)
280 cd08270 MDR4 Medium chain dehy 91.6 1.7 3.6E-05 42.5 10.5 87 298-389 133-223 (305)
281 PRK14184 bifunctional 5,10-met 91.6 0.37 8E-06 49.4 6.0 90 285-400 139-246 (286)
282 PRK14182 bifunctional 5,10-met 91.5 0.35 7.5E-06 49.5 5.8 103 286-414 140-262 (282)
283 PRK07023 short chain dehydroge 91.5 0.21 4.7E-06 47.6 4.1 33 299-333 2-36 (243)
284 PRK07201 short chain dehydroge 91.5 0.24 5.3E-06 54.5 5.0 43 298-342 371-415 (657)
285 PRK14180 bifunctional 5,10-met 91.4 0.41 8.9E-06 49.0 6.2 90 285-400 140-243 (282)
286 TIGR00936 ahcY adenosylhomocys 91.4 1 2.3E-05 48.3 9.4 157 276-445 172-357 (406)
287 PLN02778 3,5-epimerase/4-reduc 91.4 0.37 7.9E-06 48.6 5.7 36 292-329 2-38 (298)
288 PF03807 F420_oxidored: NADP o 91.3 0.42 9.2E-06 39.5 5.1 59 300-366 1-67 (96)
289 TIGR01505 tartro_sem_red 2-hyd 91.2 0.28 6E-06 49.1 4.7 83 301-393 2-98 (291)
290 PRK12938 acetyacetyl-CoA reduc 91.2 0.4 8.7E-06 45.6 5.6 30 298-329 3-32 (246)
291 TIGR00658 orni_carb_tr ornithi 91.2 2.5 5.4E-05 43.5 11.7 158 241-407 61-267 (304)
292 PRK14173 bifunctional 5,10-met 91.2 0.37 8E-06 49.4 5.6 81 286-392 138-230 (287)
293 PRK14166 bifunctional 5,10-met 91.2 0.43 9.3E-06 48.9 6.0 91 285-401 139-244 (282)
294 PRK06523 short chain dehydroge 91.2 0.26 5.6E-06 47.4 4.3 35 297-333 8-44 (260)
295 PRK14169 bifunctional 5,10-met 91.1 0.39 8.4E-06 49.2 5.7 89 286-400 139-242 (282)
296 PLN02520 bifunctional 3-dehydr 91.1 0.71 1.5E-05 50.9 8.1 44 297-343 378-423 (529)
297 cd00401 AdoHcyase S-adenosyl-L 91.1 1.1 2.3E-05 48.3 9.1 101 277-389 180-290 (413)
298 TIGR01829 AcAcCoA_reduct aceto 91.0 0.4 8.8E-06 45.1 5.4 41 299-341 1-44 (242)
299 PRK08268 3-hydroxy-acyl-CoA de 91.0 0.51 1.1E-05 51.7 6.8 94 297-393 6-128 (507)
300 PRK07791 short chain dehydroge 90.9 0.36 7.8E-06 48.0 5.2 44 298-343 6-60 (286)
301 COG2085 Predicted dinucleotide 90.9 0.87 1.9E-05 44.9 7.6 150 302-470 4-176 (211)
302 PRK06077 fabG 3-ketoacyl-(acyl 90.8 0.34 7.4E-06 46.0 4.7 30 298-329 6-35 (252)
303 PRK14176 bifunctional 5,10-met 90.8 0.58 1.3E-05 48.0 6.6 81 286-392 147-239 (287)
304 PRK12744 short chain dehydroge 90.8 0.34 7.5E-06 46.7 4.7 30 298-329 8-37 (257)
305 PRK06398 aldose dehydrogenase; 90.7 0.29 6.3E-06 47.6 4.1 34 298-333 6-41 (258)
306 PLN02545 3-hydroxybutyryl-CoA 90.6 0.53 1.1E-05 47.3 6.0 92 299-393 5-125 (295)
307 PRK12748 3-ketoacyl-(acyl-carr 90.5 0.61 1.3E-05 44.9 6.1 32 298-329 5-36 (256)
308 PRK07424 bifunctional sterol d 90.4 0.42 9E-06 51.1 5.4 38 298-337 178-217 (406)
309 PLN03154 putative allyl alcoho 90.3 1.2 2.6E-05 45.7 8.5 141 243-388 97-258 (348)
310 PRK06171 sorbitol-6-phosphate 90.3 0.31 6.8E-06 47.1 4.0 34 298-333 9-44 (266)
311 PF02882 THF_DHG_CYH_C: Tetrah 90.2 0.5 1.1E-05 44.5 5.1 79 286-388 19-108 (160)
312 PRK15057 UDP-glucose 6-dehydro 90.2 0.78 1.7E-05 48.7 7.2 125 300-432 2-163 (388)
313 PRK06940 short chain dehydroge 90.2 0.45 9.8E-06 46.9 5.1 41 299-343 3-45 (275)
314 PRK14618 NAD(P)H-dependent gly 90.1 0.92 2E-05 46.3 7.4 92 299-393 5-110 (328)
315 PRK14171 bifunctional 5,10-met 90.1 0.55 1.2E-05 48.3 5.7 90 285-400 141-245 (288)
316 PRK06701 short chain dehydroge 90.0 0.44 9.6E-06 47.5 4.9 43 298-342 46-91 (290)
317 PRK14186 bifunctional 5,10-met 90.0 0.53 1.2E-05 48.5 5.5 81 286-392 141-233 (297)
318 PRK10792 bifunctional 5,10-met 90.0 0.85 1.8E-05 46.8 6.9 82 285-392 141-234 (285)
319 PRK08309 short chain dehydroge 89.9 0.6 1.3E-05 44.2 5.5 41 300-343 2-44 (177)
320 PF00056 Ldh_1_N: lactate/mala 89.8 1 2.2E-05 41.0 6.7 65 300-366 2-75 (141)
321 PRK14172 bifunctional 5,10-met 89.8 0.6 1.3E-05 47.7 5.7 90 286-401 141-244 (278)
322 PRK11559 garR tartronate semia 89.8 0.56 1.2E-05 47.0 5.4 85 299-393 3-101 (296)
323 smart00859 Semialdhyde_dh Semi 89.8 1.1 2.3E-05 39.1 6.5 86 300-388 1-99 (122)
324 PRK01713 ornithine carbamoyltr 89.7 2 4.4E-05 44.8 9.6 164 241-406 68-277 (334)
325 PLN02695 GDP-D-mannose-3',5'-e 89.6 0.4 8.7E-06 49.8 4.4 31 297-329 20-50 (370)
326 PRK12859 3-ketoacyl-(acyl-carr 89.6 0.52 1.1E-05 45.7 4.9 32 298-329 6-37 (256)
327 PF10727 Rossmann-like: Rossma 89.5 0.46 9.9E-06 43.0 4.1 67 297-372 9-83 (127)
328 PLN02616 tetrahydrofolate dehy 89.3 0.57 1.2E-05 49.6 5.2 140 227-392 114-306 (364)
329 TIGR01830 3oxo_ACP_reduc 3-oxo 89.1 0.48 1E-05 44.5 4.2 40 301-342 1-43 (239)
330 PRK14177 bifunctional 5,10-met 89.0 0.67 1.5E-05 47.5 5.4 81 286-392 142-234 (284)
331 PRK08655 prephenate dehydrogen 89.0 1.1 2.4E-05 48.2 7.2 83 300-390 2-94 (437)
332 PLN02516 methylenetetrahydrofo 88.9 0.71 1.5E-05 47.7 5.5 82 285-392 149-242 (299)
333 TIGR01915 npdG NADPH-dependent 88.9 0.73 1.6E-05 44.5 5.3 40 300-341 2-43 (219)
334 PRK14168 bifunctional 5,10-met 88.9 0.68 1.5E-05 47.8 5.3 82 285-392 143-240 (297)
335 PRK02102 ornithine carbamoyltr 88.9 5.8 0.00013 41.5 12.3 163 241-406 68-275 (331)
336 PRK08324 short chain dehydroge 88.8 0.58 1.3E-05 52.8 5.3 45 298-344 422-468 (681)
337 PLN00015 protochlorophyllide r 88.8 0.49 1.1E-05 47.5 4.3 40 302-343 1-43 (308)
338 TIGR02622 CDP_4_6_dhtase CDP-g 88.8 0.54 1.2E-05 47.9 4.5 37 299-337 5-43 (349)
339 PRK14183 bifunctional 5,10-met 88.6 0.87 1.9E-05 46.7 5.8 105 286-414 140-262 (281)
340 PRK12824 acetoacetyl-CoA reduc 88.5 0.85 1.8E-05 43.0 5.4 29 299-329 3-31 (245)
341 PRK08261 fabG 3-ketoacyl-(acyl 88.5 0.85 1.8E-05 48.3 6.0 45 297-343 209-257 (450)
342 PF13561 adh_short_C2: Enoyl-( 88.4 0.6 1.3E-05 44.7 4.4 39 305-343 1-45 (241)
343 PLN02897 tetrahydrofolate dehy 88.4 0.73 1.6E-05 48.5 5.3 82 285-392 196-289 (345)
344 PRK09310 aroDE bifunctional 3- 88.4 0.91 2E-05 49.4 6.2 61 280-343 314-376 (477)
345 cd05293 LDH_1 A subgroup of L- 88.4 0.39 8.5E-06 49.5 3.3 66 298-366 3-77 (312)
346 PRK14181 bifunctional 5,10-met 88.4 1.2 2.7E-05 45.7 6.8 81 286-392 136-232 (287)
347 PRK07417 arogenate dehydrogena 88.4 1.2 2.5E-05 44.7 6.5 85 300-393 2-96 (279)
348 COG1090 Predicted nucleoside-d 88.2 0.52 1.1E-05 48.4 4.0 64 301-373 1-71 (297)
349 PRK08293 3-hydroxybutyryl-CoA 88.2 0.79 1.7E-05 46.0 5.2 40 299-341 4-45 (287)
350 PRK14174 bifunctional 5,10-met 88.2 0.91 2E-05 46.8 5.7 83 285-392 141-238 (295)
351 PRK13243 glyoxylate reductase; 88.2 0.94 2E-05 47.0 5.9 97 297-405 149-272 (333)
352 PRK12562 ornithine carbamoyltr 88.0 2.7 5.8E-05 44.1 9.1 165 241-407 67-278 (334)
353 PLN02657 3,8-divinyl protochlo 88.0 0.61 1.3E-05 49.0 4.4 43 291-335 53-97 (390)
354 PRK00779 ornithine carbamoyltr 88.0 3.6 7.9E-05 42.4 10.0 162 240-407 64-268 (304)
355 cd05191 NAD_bind_amino_acid_DH 87.9 1.5 3.2E-05 36.3 5.9 30 297-329 22-52 (86)
356 PRK08220 2,3-dihydroxybenzoate 87.8 0.72 1.6E-05 43.9 4.5 31 297-329 7-37 (252)
357 PRK07530 3-hydroxybutyryl-CoA 87.8 0.73 1.6E-05 46.2 4.7 39 299-340 5-45 (292)
358 PLN02928 oxidoreductase family 87.7 1.3 2.8E-05 46.3 6.7 94 297-393 158-270 (347)
359 cd05291 HicDH_like L-2-hydroxy 87.7 1.1 2.3E-05 45.7 5.9 64 300-366 2-74 (306)
360 PLN03139 formate dehydrogenase 87.7 0.86 1.9E-05 48.5 5.4 99 296-404 197-322 (386)
361 PRK06550 fabG 3-ketoacyl-(acyl 87.7 0.62 1.3E-05 44.0 3.9 30 298-329 5-34 (235)
362 TIGR01181 dTDP_gluc_dehyt dTDP 87.7 0.78 1.7E-05 44.8 4.7 28 300-329 1-30 (317)
363 PRK12367 short chain dehydroge 87.6 0.78 1.7E-05 45.0 4.7 33 298-332 14-48 (245)
364 COG1028 FabG Dehydrogenases wi 87.5 1 2.2E-05 42.9 5.3 45 297-343 4-52 (251)
365 TIGR01777 yfcH conserved hypot 87.5 0.47 1E-05 46.0 3.0 32 301-334 1-34 (292)
366 PF01370 Epimerase: NAD depend 87.4 0.96 2.1E-05 42.3 5.0 27 301-329 1-27 (236)
367 COG3967 DltE Short-chain dehyd 87.2 1.1 2.3E-05 44.7 5.2 44 299-344 6-51 (245)
368 PRK07066 3-hydroxybutyryl-CoA 86.9 1.5 3.2E-05 45.6 6.4 41 297-340 6-48 (321)
369 TIGR03466 HpnA hopanoid-associ 86.8 0.55 1.2E-05 46.3 3.1 33 300-334 2-36 (328)
370 cd01079 NAD_bind_m-THF_DH NAD 86.6 1.6 3.6E-05 42.6 6.2 33 295-329 59-91 (197)
371 cd08289 MDR_yhfp_like Yhfp put 86.6 1.7 3.7E-05 42.9 6.5 98 285-388 129-243 (326)
372 cd08294 leukotriene_B4_DH_like 86.5 3.1 6.7E-05 41.1 8.3 99 284-388 128-241 (329)
373 TIGR01746 Thioester-redct thio 86.5 0.87 1.9E-05 45.3 4.4 32 300-333 1-36 (367)
374 PRK14167 bifunctional 5,10-met 86.3 1.2 2.6E-05 46.0 5.4 82 285-392 139-236 (297)
375 TIGR03026 NDP-sugDHase nucleot 86.3 2.9 6.3E-05 44.3 8.4 110 300-412 2-160 (411)
376 COG0111 SerA Phosphoglycerate 86.3 1.4 3.1E-05 45.7 6.0 83 298-389 142-234 (324)
377 TIGR02279 PaaC-3OHAcCoADH 3-hy 86.2 1.1 2.4E-05 49.2 5.3 37 299-338 6-44 (503)
378 PRK02255 putrescine carbamoylt 86.2 9.1 0.0002 40.2 11.8 162 241-407 64-275 (338)
379 COG3268 Uncharacterized conser 85.9 0.86 1.9E-05 48.0 4.0 89 298-388 6-104 (382)
380 PRK06300 enoyl-(acyl carrier p 85.8 1.4 3.1E-05 44.9 5.6 33 297-329 7-39 (299)
381 COG0686 Ald Alanine dehydrogen 85.6 1.6 3.5E-05 45.7 5.8 103 298-406 168-293 (371)
382 TIGR01759 MalateDH-SF1 malate 85.6 0.97 2.1E-05 46.9 4.3 25 299-325 4-28 (323)
383 PRK06130 3-hydroxybutyryl-CoA 85.4 1.4 3E-05 44.5 5.3 40 299-341 5-46 (311)
384 KOG0539 Sphingolipid fatty aci 85.3 1.2 2.6E-05 44.0 4.5 61 41-112 172-233 (240)
385 cd05311 NAD_bind_2_malic_enz N 85.2 1.7 3.7E-05 42.7 5.6 114 297-416 24-161 (226)
386 cd00704 MDH Malate dehydrogena 85.1 0.99 2.1E-05 46.8 4.1 24 300-325 2-25 (323)
387 PRK14188 bifunctional 5,10-met 85.0 2.4 5.3E-05 43.7 6.9 100 228-329 44-187 (296)
388 cd08253 zeta_crystallin Zeta-c 85.0 3.9 8.5E-05 39.5 8.0 41 298-340 145-187 (325)
389 cd05276 p53_inducible_oxidored 85.0 3.1 6.8E-05 40.0 7.3 42 297-340 139-182 (323)
390 cd08295 double_bond_reductase_ 84.8 2.6 5.6E-05 42.5 6.9 99 285-388 137-251 (338)
391 PLN02653 GDP-mannose 4,6-dehyd 84.8 1 2.2E-05 45.5 4.0 30 298-329 6-35 (340)
392 PRK09496 trkA potassium transp 84.8 2.7 5.8E-05 44.4 7.2 39 300-341 2-42 (453)
393 smart00822 PKS_KR This enzymat 84.7 1.1 2.4E-05 39.1 3.7 33 299-333 1-36 (180)
394 TIGR00872 gnd_rel 6-phosphoglu 84.7 1.6 3.5E-05 44.2 5.4 102 300-408 2-121 (298)
395 PRK07574 formate dehydrogenase 84.7 1.6 3.6E-05 46.4 5.6 98 297-404 191-315 (385)
396 PRK11199 tyrA bifunctional cho 84.6 1.2 2.5E-05 47.0 4.5 38 292-331 92-129 (374)
397 PLN02527 aspartate carbamoyltr 84.6 9.5 0.00021 39.4 11.0 159 241-405 61-267 (306)
398 PLN00016 RNA-binding protein; 84.5 0.98 2.1E-05 46.8 3.8 38 295-334 49-92 (378)
399 COG0569 TrkA K+ transport syst 84.4 2.7 5.9E-05 41.2 6.6 37 299-338 1-39 (225)
400 PRK10675 UDP-galactose-4-epime 84.4 1.1 2.4E-05 44.9 4.0 28 300-329 2-29 (338)
401 PRK12490 6-phosphogluconate de 84.3 2.8 6.1E-05 42.4 6.9 102 300-411 2-125 (299)
402 PLN00112 malate dehydrogenase 84.1 1.8 3.8E-05 47.1 5.6 66 298-365 100-181 (444)
403 PRK15438 erythronate-4-phospha 84.1 3.6 7.8E-05 43.8 7.8 84 297-393 115-215 (378)
404 KOG4169 15-hydroxyprostaglandi 84.0 2 4.3E-05 43.3 5.5 75 298-374 5-97 (261)
405 KOG0409 Predicted dehydrogenas 83.9 1.8 4E-05 45.0 5.4 147 275-433 15-184 (327)
406 PTZ00354 alcohol dehydrogenase 83.9 4.3 9.3E-05 40.0 7.9 86 297-388 140-240 (334)
407 PRK14619 NAD(P)H-dependent gly 83.6 8.9 0.00019 39.0 10.2 28 299-329 5-32 (308)
408 TIGR02437 FadB fatty oxidation 83.5 1.8 3.9E-05 49.5 5.7 42 295-339 310-353 (714)
409 COG2084 MmsB 3-hydroxyisobutyr 83.4 1.7 3.7E-05 44.7 4.9 101 300-410 2-125 (286)
410 TIGR01179 galE UDP-glucose-4-e 83.3 1.2 2.5E-05 43.8 3.6 28 300-329 1-28 (328)
411 PRK05442 malate dehydrogenase; 83.3 1.1 2.5E-05 46.5 3.6 26 298-325 4-29 (326)
412 cd05292 LDH_2 A subgroup of L- 83.1 2.7 5.9E-05 43.0 6.3 63 300-366 2-73 (308)
413 PRK15469 ghrA bifunctional gly 83.1 1.9 4E-05 44.5 5.1 95 298-404 136-257 (312)
414 cd05280 MDR_yhdh_yhfp Yhdh and 83.1 5.7 0.00012 39.0 8.4 85 298-388 147-243 (325)
415 COG0499 SAM1 S-adenosylhomocys 83.1 3.6 7.8E-05 43.9 7.2 169 278-457 188-388 (420)
416 COG0604 Qor NADPH:quinone redu 83.0 2.6 5.6E-05 43.5 6.1 136 243-388 80-241 (326)
417 PRK12480 D-lactate dehydrogena 82.8 3.8 8.3E-05 42.6 7.3 94 297-404 145-265 (330)
418 PLN02858 fructose-bisphosphate 82.7 2.2 4.7E-05 52.4 6.3 178 224-411 237-451 (1378)
419 cd08259 Zn_ADH5 Alcohol dehydr 82.5 3.7 8.1E-05 40.4 6.8 42 297-340 162-205 (332)
420 cd05294 LDH-like_MDH_nadp A la 82.4 1.7 3.6E-05 44.6 4.5 28 300-329 2-31 (309)
421 PRK14106 murD UDP-N-acetylmura 82.3 3.5 7.6E-05 43.6 6.9 29 298-329 5-33 (450)
422 PLN02206 UDP-glucuronate decar 82.3 1.6 3.4E-05 47.0 4.3 31 297-329 118-148 (442)
423 PRK04284 ornithine carbamoyltr 82.3 17 0.00038 38.0 11.9 164 241-407 67-277 (332)
424 PRK10217 dTDP-glucose 4,6-dehy 82.2 1.3 2.9E-05 44.8 3.6 29 299-329 2-30 (355)
425 cd01338 MDH_choloroplast_like 82.0 1.2 2.6E-05 46.1 3.3 25 299-325 3-27 (322)
426 PRK11908 NAD-dependent epimera 82.0 2 4.2E-05 43.7 4.8 36 299-336 2-40 (347)
427 cd08293 PTGR2 Prostaglandin re 82.0 4.2 9.1E-05 40.7 7.1 85 299-388 156-254 (345)
428 cd08243 quinone_oxidoreductase 82.0 4.1 8.8E-05 39.7 6.8 98 285-388 128-238 (320)
429 cd08241 QOR1 Quinone oxidoredu 82.0 5.6 0.00012 38.4 7.7 42 297-340 139-182 (323)
430 PRK06223 malate dehydrogenase; 81.9 3.4 7.3E-05 41.8 6.4 65 299-366 3-76 (307)
431 PF02254 TrkA_N: TrkA-N domain 81.8 3 6.5E-05 35.4 5.2 39 301-342 1-41 (116)
432 PLN02240 UDP-glucose 4-epimera 81.7 1.7 3.7E-05 43.8 4.1 29 299-329 6-34 (352)
433 PRK11891 aspartate carbamoyltr 81.6 7.7 0.00017 42.1 9.2 162 241-406 148-357 (429)
434 PRK09424 pntA NAD(P) transhydr 81.5 5.5 0.00012 44.1 8.3 137 241-391 105-287 (509)
435 PLN02996 fatty acyl-CoA reduct 81.3 2 4.2E-05 46.9 4.7 25 297-323 10-34 (491)
436 PLN02572 UDP-sulfoquinovose sy 81.2 1.6 3.5E-05 46.7 4.0 30 298-329 47-76 (442)
437 KOG1200 Mitochondrial/plastidi 81.2 2.7 5.9E-05 41.6 5.1 45 298-344 14-60 (256)
438 PLN02166 dTDP-glucose 4,6-dehy 81.1 1.9 4.2E-05 46.2 4.5 31 297-329 119-149 (436)
439 cd05288 PGDH Prostaglandin deh 81.1 4.4 9.6E-05 40.1 6.8 88 298-390 146-246 (329)
440 PRK12491 pyrroline-5-carboxyla 80.9 5.5 0.00012 40.1 7.5 84 299-393 3-103 (272)
441 PRK06035 3-hydroxyacyl-CoA deh 80.8 2.3 4.9E-05 42.7 4.7 39 299-340 4-44 (291)
442 PRK11150 rfaD ADP-L-glycero-D- 80.8 1.5 3.3E-05 43.4 3.4 27 301-329 2-28 (308)
443 PRK09009 C factor cell-cell si 80.7 2 4.3E-05 40.6 4.0 28 300-329 2-31 (235)
444 PRK11064 wecC UDP-N-acetyl-D-m 80.7 8.9 0.00019 41.0 9.3 90 299-393 4-124 (415)
445 PRK08410 2-hydroxyacid dehydro 80.6 4.2 9.1E-05 41.8 6.6 84 297-393 144-240 (311)
446 TIGR01214 rmlD dTDP-4-dehydror 80.5 1.7 3.8E-05 42.3 3.6 28 300-329 1-28 (287)
447 PLN02602 lactate dehydrogenase 80.4 1.6 3.4E-05 46.0 3.4 64 299-366 38-111 (350)
448 KOG1203 Predicted dehydrogenas 80.4 2.3 5.1E-05 45.8 4.8 62 277-340 57-121 (411)
449 KOG1371 UDP-glucose 4-epimeras 80.1 4.5 9.9E-05 42.5 6.6 30 298-329 2-31 (343)
450 cd08268 MDR2 Medium chain dehy 80.1 8.6 0.00019 37.3 8.3 86 298-389 145-244 (328)
451 COG0039 Mdh Malate/lactate deh 80.0 2.1 4.6E-05 44.5 4.3 35 299-336 1-39 (313)
452 TIGR01327 PGDH D-3-phosphoglyc 79.9 4 8.6E-05 45.1 6.5 100 297-405 137-261 (525)
453 PRK06436 glycerate dehydrogena 79.9 3.9 8.5E-05 42.1 6.1 80 297-389 121-210 (303)
454 cd05290 LDH_3 A subgroup of L- 79.9 3.1 6.8E-05 42.8 5.4 64 300-366 1-74 (307)
455 cd00650 LDH_MDH_like NAD-depen 79.9 2.5 5.4E-05 41.9 4.6 63 301-366 1-76 (263)
456 PF01073 3Beta_HSD: 3-beta hyd 79.8 2.2 4.9E-05 42.9 4.3 26 302-329 1-28 (280)
457 PLN02306 hydroxypyruvate reduc 79.5 4.5 9.7E-05 43.1 6.6 94 297-393 164-280 (386)
458 PRK11730 fadB multifunctional 79.3 3.4 7.4E-05 47.3 6.0 38 297-337 312-351 (715)
459 PRK06129 3-hydroxyacyl-CoA deh 79.3 3.1 6.6E-05 42.3 5.1 37 300-339 4-42 (308)
460 TIGR01692 HIBADH 3-hydroxyisob 79.3 2.6 5.6E-05 42.3 4.5 92 311-409 6-119 (288)
461 PRK11880 pyrroline-5-carboxyla 78.6 4.2 9.1E-05 40.0 5.7 40 300-342 4-48 (267)
462 PRK08192 aspartate carbamoyltr 78.6 8 0.00017 40.6 8.0 162 241-406 66-276 (338)
463 COG1484 DnaC DNA replication p 78.6 4.9 0.00011 40.2 6.2 77 287-369 95-176 (254)
464 PRK08605 D-lactate dehydrogena 78.6 4.9 0.00011 41.7 6.4 82 297-389 145-237 (332)
465 KOG1210 Predicted 3-ketosphing 78.4 3.1 6.7E-05 43.5 4.8 59 287-347 22-82 (331)
466 PTZ00117 malate dehydrogenase; 78.4 4 8.7E-05 42.1 5.7 37 297-336 4-43 (319)
467 PTZ00082 L-lactate dehydrogena 78.4 5.3 0.00012 41.3 6.6 64 299-366 7-80 (321)
468 PRK11154 fadJ multifunctional 78.4 3.8 8.3E-05 46.8 6.0 38 297-337 308-348 (708)
469 TIGR02441 fa_ox_alpha_mit fatt 78.2 3.2 7E-05 47.7 5.4 39 297-338 334-374 (737)
470 COG0287 TyrA Prephenate dehydr 78.1 3.6 7.9E-05 42.0 5.2 29 298-329 3-31 (279)
471 PRK00257 erythronate-4-phospha 78.0 7.9 0.00017 41.3 7.8 80 297-389 115-208 (381)
472 TIGR02825 B4_12hDH leukotriene 77.9 5.6 0.00012 39.8 6.4 87 297-389 138-238 (325)
473 cd01339 LDH-like_MDH L-lactate 77.9 4.2 9.1E-05 41.2 5.6 62 301-366 1-72 (300)
474 TIGR02823 oxido_YhdH putative 77.9 6 0.00013 39.1 6.6 88 295-388 143-241 (323)
475 cd05211 NAD_bind_Glu_Leu_Phe_V 77.8 5.1 0.00011 39.3 5.9 30 297-329 22-51 (217)
476 KOG2380 Prephenate dehydrogena 77.7 3.7 8E-05 43.7 5.1 143 268-416 19-182 (480)
477 PF02558 ApbA: Ketopantoate re 77.6 4 8.6E-05 36.4 4.8 37 301-341 1-39 (151)
478 PRK15409 bifunctional glyoxyla 77.5 4.8 0.00011 41.7 6.0 99 296-404 143-267 (323)
479 cd05286 QOR2 Quinone oxidoredu 77.4 10 0.00023 36.3 8.0 86 298-389 137-236 (320)
480 TIGR00670 asp_carb_tr aspartat 77.3 20 0.00043 37.0 10.3 161 241-405 61-264 (301)
481 PLN02477 glutamate dehydrogena 77.2 10 0.00023 40.8 8.6 29 297-328 205-233 (410)
482 PRK08664 aspartate-semialdehyd 77.2 4.2 9.2E-05 42.3 5.5 29 299-329 4-33 (349)
483 PRK07578 short chain dehydroge 77.2 2.8 6E-05 38.8 3.8 27 300-329 2-28 (199)
484 PLN02342 ornithine carbamoyltr 77.1 28 0.0006 36.8 11.5 162 241-407 107-310 (348)
485 PRK13771 putative alcohol dehy 76.8 9.4 0.0002 38.0 7.7 54 285-340 149-205 (334)
486 PRK06522 2-dehydropantoate 2-r 76.8 4.2 9E-05 40.3 5.1 39 300-341 2-42 (304)
487 TIGR01751 crot-CoA-red crotony 76.8 5.8 0.00013 41.2 6.4 43 298-343 190-234 (398)
488 COG2130 Putative NADP-dependen 76.7 6.2 0.00013 41.3 6.3 104 277-383 128-244 (340)
489 PRK09987 dTDP-4-dehydrorhamnos 76.6 2.6 5.6E-05 42.3 3.6 27 300-329 2-28 (299)
490 PRK10669 putative cation:proto 76.5 3.5 7.7E-05 45.4 4.9 41 298-341 417-459 (558)
491 TIGR02197 heptose_epim ADP-L-g 76.5 2.6 5.7E-05 41.5 3.6 27 301-329 1-28 (314)
492 TIGR02440 FadJ fatty oxidation 76.4 4.4 9.6E-05 46.3 5.8 39 297-338 303-344 (699)
493 PF01113 DapB_N: Dihydrodipico 76.2 4.3 9.4E-05 36.0 4.5 28 300-329 2-30 (124)
494 PRK06487 glycerate dehydrogena 76.2 5.4 0.00012 41.1 5.9 93 297-404 147-264 (317)
495 PRK00436 argC N-acetyl-gamma-g 76.0 4.5 9.7E-05 42.1 5.3 88 299-388 3-99 (343)
496 smart00829 PKS_ER Enoylreducta 76.0 8.5 0.00018 36.4 6.8 88 298-389 105-206 (288)
497 TIGR01724 hmd_rel H2-forming N 75.9 3.8 8.2E-05 43.1 4.6 73 313-393 32-121 (341)
498 PLN02350 phosphogluconate dehy 75.7 3.4 7.3E-05 45.5 4.4 110 297-411 5-138 (493)
499 cd08249 enoyl_reductase_like e 75.6 10 0.00022 38.2 7.7 86 297-388 154-254 (339)
500 PRK11790 D-3-phosphoglycerate 75.5 6 0.00013 42.4 6.2 96 297-404 150-270 (409)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=4e-153 Score=1217.52 Aligned_cols=451 Identities=69% Similarity=1.201 Sum_probs=435.6
Q ss_pred cceeeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcc
Q 011973 3 NIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPS 82 (474)
Q Consensus 3 ~~~~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~ 82 (474)
++.++|+..||+.|++.+.+++++|+++.++.+..|+.++++|+++.+++++++|||+|++|+++++.+|+++|+++||+
T Consensus 167 ~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPs 246 (620)
T PLN02869 167 VTEPITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPS 246 (620)
T ss_pred CCCchhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchheecCch
Confidence 46678888888889999999999999988778788999999999999999999999999999999998999999999999
Q ss_pred hhhhhhhCCCCCcccchhHHHHhcCCCCCCChhHHHHHhhcCCcccccccCCccEEEeeccCCccchhccccccccccCC
Q 011973 83 YHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASK 162 (474)
Q Consensus 83 ~H~lHHs~~~~NYg~~f~lWDrLFGT~~~~~~~~~e~~~~r~~~~~~~~~~~pd~v~l~H~t~~~s~~h~~~g~~~~as~ 162 (474)
||++||+++++|||++|++|||+|||+++++|++|++..+ +.++ +||||||||+||++|+||+|+||+|+||.
T Consensus 247 fHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~--~~~~-----~pd~V~l~H~t~~~s~~h~~~~~~s~as~ 319 (620)
T PLN02869 247 YHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLK--RPEE-----IPDVVHLTHLTTPDSIYHLRLGFASLASK 319 (620)
T ss_pred HHhHHhccCCcCcccchHHHHhccCCCCCCchhHHHHhhc--Cccc-----CCCEEEEeccCCHHHhhccchHHHHhccC
Confidence 9999999999999999999999999999999999999988 4343 89999999999999999999999999999
Q ss_pred CCcccccccccccccchhhHHHHHHHHHHhhcceEEeeccccCceeeeEEEecccCcccccchhHHHHHHHHHHHHHHHH
Q 011973 163 PHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEAD 242 (474)
Q Consensus 163 p~~~~~~~~~w~~~p~~P~~~~~~~~~~w~~g~~f~~~~~~~~~~~~~tw~iPr~~~~y~~~~~~~~in~~Ie~Ai~~A~ 242 (474)
||+ ++||+|||||+++.+|+++ |++||+|++|+|+|+|+++|||+||||||||++|+++++||++||+||++||
T Consensus 320 p~~-----~~~~l~~~wp~~~~~m~~~-w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad 393 (620)
T PLN02869 320 PYI-----SKWYLRLMWPVTSWSMMLT-WIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEAD 393 (620)
T ss_pred Ccc-----chhHHHHHHHHHHHHHHHH-HHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHH
Confidence 999 8999999999999999999 6999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhc
Q 011973 243 AKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ 322 (474)
Q Consensus 243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~ 322 (474)
|+|+||+|||+|||+|+|||+|++||+|||+ ||||||||||||||||+|+||++++|||++|||+ |||||||.+|||
T Consensus 394 ~~Gvkv~sLg~LNk~~~LN~~G~l~v~k~p~-L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~s--K~~raia~~lc~ 470 (620)
T PLN02869 394 KRGVKVLSLGLLNQGEELNRYGELYIHRNPK-LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYFIASALCQ 470 (620)
T ss_pred hcCCEEEechhcchhhhhcCCceEeeecCCC-cceEEEeCCchHHHHHHHhcCCCCceEEEecCcc--HHHHHHHHHHHh
Confidence 9999999999999999999999999999999 9999999999999999999999999999999997 999999999999
Q ss_pred cCcEEEecchhhHHHHHhhCcc-ccccceeeecccccCceeEEEEcCcCChhhhhcCCCCceeecccccCccCCCCCeee
Q 011973 323 MGIKVATICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFY 401 (474)
Q Consensus 323 ~~v~v~l~~~~~~~~l~~~~~~-~~~~~l~~~t~~~~~~~~vwivg~~i~~~eq~~a~~G~~f~~~~~v~p~~~R~dc~y 401 (474)
||||++..++|||++||+|++. ++|++|+++|+| +||+|||||+++++||+||||||+||||||+|+++.||||+|
T Consensus 471 r~i~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~R~dC~Y 547 (620)
T PLN02869 471 RGIQVATFREDEYEKLNKKLPNTECGSKLLLSKNY---SEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFY 547 (620)
T ss_pred cCCeEeecCHHHHHHHHHhccchhhhhhEEEeecc---CceeEEecCCCCHHHHhhCCCCCeecccccCCchhhhccccc
Confidence 9999655899999999999999 899999999999 999999999999999999999999999999999999999999
Q ss_pred ecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchh-hhhHHHHHHHHHhCCCccCCCC
Q 011973 402 HSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQT-MCDIHQVWHASLRHGFRPLFPV 473 (474)
Q Consensus 402 ~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~~e~G~i-v~~id~iw~aa~kHGF~p~~~~ 473 (474)
.++|||++|+++||++|||||||||+|+||||||||||||||++|||| | |++||++|+||+||||+|+...
T Consensus 548 ~~~pam~~p~~~~~~~sce~~l~r~v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~ 619 (620)
T PLN02869 548 HTTPAMMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP 619 (620)
T ss_pred cCCccccCChhhcccchhhccccchhhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence 999999999999999999999999999999999999999999999999 8 9999999999999999998754
No 2
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=100.00 E-value=3.8e-68 Score=486.15 Aligned_cols=164 Identities=61% Similarity=1.106 Sum_probs=160.1
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccccCceeEEEEcCcCChhhhhcCCC
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPK 380 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwivg~~i~~~eq~~a~~ 380 (474)
|||+|+++ |||||||.+||||||||+|.++|+|++||++++.+++.||+++|+| ++|+|||||+|+++||+||||
T Consensus 1 V~L~G~~s--KvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~---~~K~WlVGd~l~~~EQ~~Ap~ 75 (164)
T PF12076_consen 1 VFLTGNTS--KVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSY---QAKTWLVGDGLTEEEQKWAPK 75 (164)
T ss_pred Ceeccccc--HHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCC---CceeEEeCCCCCHHHHhcCCC
Confidence 79999996 9999999999999999999999999999999999999999999999 779999999999999999999
Q ss_pred CceeecccccCccCCCCCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchhhhhHHHHHH
Q 011973 381 GTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWH 460 (474)
Q Consensus 381 G~~f~~~~~v~p~~~R~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~~e~G~iv~~id~iw~ 460 (474)
||+|||||||||+++||||+|+++|||++|++++|+||||||||||+|+||||||||||||||++||||.-|++||++|+
T Consensus 76 Gt~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~ 155 (164)
T PF12076_consen 76 GTHFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWE 155 (164)
T ss_pred CCEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999933999999999
Q ss_pred HHHhCCCcc
Q 011973 461 ASLRHGFRP 469 (474)
Q Consensus 461 aa~kHGF~p 469 (474)
||++|||+|
T Consensus 156 AAl~HGF~P 164 (164)
T PF12076_consen 156 AALKHGFRP 164 (164)
T ss_pred HHHHcCCCC
Confidence 999999998
No 3
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=100.00 E-value=3.6e-49 Score=387.27 Aligned_cols=304 Identities=19% Similarity=0.216 Sum_probs=254.5
Q ss_pred CccEEEeeccCC---ccc--hhccccccccccCCCCccccccccccc-ccchhhHHHHHHHHHHhhcceEEeeccccCce
Q 011973 134 DVDVVHLTHLTT---PES--IYHLRIGFASLASKPHRYTYTLSQWYL-QLLWPFTASCSVLVSWIYGRTFVSESNTLDKL 207 (474)
Q Consensus 134 ~pd~v~l~H~t~---~~s--~~h~~~g~~~~as~p~~~~~~~~~w~~-~p~~P~~~~~~~~~~w~~g~~f~~~~~~~~~~ 207 (474)
.-+|++|+|+|+ .|+ +...++||..+|.+.|.. .+||. .| |+.++.|-+.| +.|+.+ ++.
T Consensus 9 ~~~fG~I~h~Ts~~l~ehv~~v~~~~~~~~~ad~g~~~----DfW~~~~~--~~~aD~~rI~s-aqG~vi-------eg~ 74 (351)
T COG5322 9 KEMFGLIGHLTSARLLEHVQAVAKRLGYPEYADQGLPM----DFWCSPAP--PQMADEMRIRS-AQGKVI-------EGY 74 (351)
T ss_pred hhhcceecccchHhHhhhhhhhhhhcCChHHHhcCCCc----cccccCCc--cccccceEEEe-ecccEE-------EEE
Confidence 558999999999 887 899999999999999942 38997 57 99999999999 999999 999
Q ss_pred eeeEEEecccCcccccchhHHHHHHHHHHHHHHHHHcCCcEEEeccccccccccccCce-eeecCCCCcc-eeeecCChh
Q 011973 208 KLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI-YLERQPNKLK-IKVVDGSSL 285 (474)
Q Consensus 208 ~~~tw~iPr~~~~y~~~~~~~~in~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l-~v~k~p~~L~-irvv~Gnsl 285 (474)
+++++++|+ ++..+ .+++.|.+.+|++.|+|.|++|++||+|+| +.++-+. .+.|+|. |. +|+|||||+
T Consensus 75 l~~~pllpe----~~~s~-pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e-~t~~~~ttgns~ 145 (351)
T COG5322 75 LVESPLLPE----MLRSR-PKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVE-LTFTRFTTGNSH 145 (351)
T ss_pred EEccccCHH----HHhhC-HHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceE-EEEEecccCCcc
Confidence 999999999 88866 888888899999999999999999999999 6664333 4568999 88 999999999
Q ss_pred HHHHHHhcCcC---------CCcEEEEeccCCCchhHHHHHHHHh-ccCcEEEe------cchhhHHHHHhhCccccccc
Q 011973 286 AAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT------ICKDDYEKLKLRIPVEAQHN 349 (474)
Q Consensus 286 taAvvl~~ip~---------~~~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l------~~~~~~~~l~~~~~~~~~~~ 349 (474)
||+++|.++.+ ..++|.+||||| +||++||+||+ +-++++++ +++++++.||+++..+.
T Consensus 146 Tayaa~r~Vl~~~~~lGidlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~--- 220 (351)
T COG5322 146 TAYAACRQVLKHFAQLGIDLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGK--- 220 (351)
T ss_pred chHHHHHHHHHHHHHhCcCHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCe---
Confidence 99999999977 488999999999 99999999999 78888887 67778888888877776
Q ss_pred eeeeccccc--CceeEEEE----cCcCChhhhhcCCCCceeecccc---cCcc-CCCCCeeeecCCccccCCC--Ccccc
Q 011973 350 LVLSTSYAA--HKTKIWLV----GDDLTGKEQARAPKGTIFIPYTQ---IPPR-KLRKDCFYHSTPAMIIPPS--LSNMH 417 (474)
Q Consensus 350 l~~~t~~~~--~~~~vwiv----g~~i~~~eq~~a~~G~~f~~~~~---v~p~-~~R~dc~y~~~~am~vP~~--~~~~~ 417 (474)
++ +++|+. ++..+|++ |-.|.|+.+ +||...+|=.. +++. +-|.|+..+.++.+.-|.+ |..+.
T Consensus 221 i~-s~d~~~~~e~i~v~vAs~~~g~~I~pq~l---kpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~ 296 (351)
T COG5322 221 IM-SLDYALPQEDILVWVASMPKGVEIFPQHL---KPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMK 296 (351)
T ss_pred ee-eccccccccceEEEEeecCCCceechhhc---cCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHH
Confidence 33 555653 56677994 445666655 67777766652 3333 4446677777777777775 66665
Q ss_pred ccccccCcchhHHHHHhhhhhhhcCCCCC-ccch-h-hhhHHHHHHHHHhCCCccCC
Q 011973 418 SCENWLGRRVMSAWRIAGIIHALEGWDLN-ECGQ-T-MCDIHQVWHASLRHGFRPLF 471 (474)
Q Consensus 418 ~~e~~~prr~~~Ac~a~~~v~alEgw~~~-e~G~-i-v~~id~iw~aa~kHGF~p~~ 471 (474)
..+| |.|+++||.||+||+++|||++| +||| | +|||++|.++|.||||+|+.
T Consensus 297 ~~~~--p~~~l~aClAEtlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~ 351 (351)
T COG5322 297 IVGM--PVRQLFACLAETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD 351 (351)
T ss_pred Hccc--chhhHHHHHHHHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence 5555 99999999999999999999999 5999 8 99999999999999999964
No 4
>PRK14982 acyl-ACP reductase; Provisional
Probab=100.00 E-value=4.1e-48 Score=395.38 Aligned_cols=300 Identities=18% Similarity=0.244 Sum_probs=250.8
Q ss_pred cEEEeeccCCccc--hhccccccccccCCCCcccccccccccccchhhHHHHHHHHHHhhcceEEeeccccCceeeeEEE
Q 011973 136 DVVHLTHLTTPES--IYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWV 213 (474)
Q Consensus 136 d~v~l~H~t~~~s--~~h~~~g~~~~as~p~~~~~~~~~w~~~p~~P~~~~~~~~~~w~~g~~f~~~~~~~~~~~~~tw~ 213 (474)
||+||.|+|++++ ..+..+||+.++...+. .||+.| |+.+..+.++| .+|+++ +|.++.+++
T Consensus 1 ~f~fi~H~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~--p~~~~~~~v~S-~~g~~~-------eg~~i~~~~ 64 (340)
T PRK14982 1 MFGLIGHLTSLEHAQRVARELGYDEYADQDLD------FWCSAP--PQLVDHIEVTS-ATGQTI-------EGKYIESCF 64 (340)
T ss_pred CEEEEeccCCHHHhHHHHhcCCccccChHhHH------HHhhCC--CeEeeeEEEEe-CCCCEE-------EEEEEeCCC
Confidence 7999999999998 45999999999999998 799999 99999999999 999999 999999999
Q ss_pred ecccCcccccchhHHHHHHHHHHHHHHHHHcCCcEEEeccccccccccccCceeeecCCC--Ccce---eeecCChhHHH
Q 011973 214 VPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPN--KLKI---KVVDGSSLAAA 288 (474)
Q Consensus 214 iPr~~~~y~~~~~~~~in~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~--~L~i---rvv~GnsltaA 288 (474)
.|+ ++...+.+.+.++|++|+..|+|.|++|++||+|++ +.+++. .+.++.+ .++| +|||||||||+
T Consensus 65 ~pe----~l~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~~-~~~~~~~~r~i~ie~~~~TtGNs~T~~ 136 (340)
T PRK14982 65 LPE----MLSNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFENF-NLLQHKQVRNTTLEWERFTTGNTHTAY 136 (340)
T ss_pred CHH----HHhccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCCc-ccccccccccceeccccccCCchhHHH
Confidence 998 887767777767799999999999999999999999 765552 3332211 1445 89999999999
Q ss_pred HHHhcCcC---------CCcEEEEeccCCCchhHHHHHHHHhc-cCc-EEEe--cchhhHHHHHhhCccccccceeeecc
Q 011973 289 VVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQ-MGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS 355 (474)
Q Consensus 289 vvl~~ip~---------~~~~V~l~Gatg~~kig~ava~~L~~-~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~ 355 (474)
+.+++++. ..++|+|+||+| +||+.+|+.|++ .|+ ++++ |++++++.+++++..+. +. +
T Consensus 137 ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~---i~---~ 208 (340)
T PRK14982 137 VICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK---IL---S 208 (340)
T ss_pred HHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc---HH---h
Confidence 99998865 368999999999 999999999984 454 6666 88899999998865332 22 2
Q ss_pred cc-c-CceeE--EEEcC----cCChhhhhcCCCCceeecccccCcc----CCCCCeeeecCCccccCCCCc-cc-ccccc
Q 011973 356 YA-A-HKTKI--WLVGD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLS-NM-HSCEN 421 (474)
Q Consensus 356 ~~-~-~~~~v--wivg~----~i~~~eq~~a~~G~~f~~~~~v~p~----~~R~dc~y~~~~am~vP~~~~-~~-~~~e~ 421 (474)
+. . +.+++ ++.+. .+++++. +++.++||.+ +|+. .-|+|+++.+++.+++|.+++ ++ ...|+
T Consensus 209 l~~~l~~aDiVv~~ts~~~~~~I~~~~l---~~~~~viDiA-vPRDVd~~v~~~~V~v~~gG~V~~p~~vd~~l~~~v~~ 284 (340)
T PRK14982 209 LEEALPEADIVVWVASMPKGVEIDPETL---KKPCLMIDGG-YPKNLDTKVQGPGIHVLKGGIVEHSLDIDWKIMEIAEM 284 (340)
T ss_pred HHHHHccCCEEEECCcCCcCCcCCHHHh---CCCeEEEEec-CCCCCCcccCCCCEEEEeCCccccCCCcCccHHHHHhc
Confidence 32 2 34444 44443 4888877 7999999999 5554 445999999999999999977 33 34679
Q ss_pred ccCcchhHHHHHhhhhhhhcCCCCC-ccch--h-hhhHHHHHHHHHhCCCccCC
Q 011973 422 WLGRRVMSAWRIAGIIHALEGWDLN-ECGQ--T-MCDIHQVWHASLRHGFRPLF 471 (474)
Q Consensus 422 ~~prr~~~Ac~a~~~v~alEgw~~~-e~G~--i-v~~id~iw~aa~kHGF~p~~ 471 (474)
++|+|+++||+||+||++||||++| +||| | ++||++|.++|+||||+|+-
T Consensus 285 ~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~~ 338 (340)
T PRK14982 285 DNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPLL 338 (340)
T ss_pred cchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCcccc
Confidence 9999999999999999999999999 5997 8 99999999999999999964
No 5
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.72 E-value=9.8e-18 Score=167.03 Aligned_cols=111 Identities=23% Similarity=0.324 Sum_probs=97.8
Q ss_pred cceeeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcc
Q 011973 3 NIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPS 82 (474)
Q Consensus 3 ~~~~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~ 82 (474)
+.+++||.+.||+|.++......+|++ +.|.++.++.++.++..+.+.++|||++. | + .++++++++.||+
T Consensus 135 ~~~~~t~~~~hp~e~ll~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~H~~~~~-~-~---~~~~~~~v~~~p~ 205 (271)
T COG3000 135 VPDPLTALRFHPLEILLLAFLGLLPLL----LLGLSPVAVALLFIFLLFWAVLIHSNLDL-P-L---PLGWLRYVFNTPR 205 (271)
T ss_pred cCCchhhhhcChHHHHHHHHHHHHHHH----HhcCCHHHHHHHHHHHHHHHHHHhcCccc-c-C---CcccceeeecCch
Confidence 678899999999999999988888877 66799999999999999999999999997 4 1 3346677789999
Q ss_pred hhhhhhhCC--CCCcccchhHHHHhcCCCCCCChhHHHHHhh
Q 011973 83 YHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEKSLK 122 (474)
Q Consensus 83 ~H~lHHs~~--~~NYg~~f~lWDrLFGT~~~~~~~~~e~~~~ 122 (474)
+|++||+++ |+|||.+|++|||+|||+.++.++.+++...
T Consensus 206 ~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~~~~ 247 (271)
T COG3000 206 HHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDKIGV 247 (271)
T ss_pred HHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCcccccc
Confidence 999999997 4999999999999999999998887777554
No 6
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=99.44 E-value=1.1e-13 Score=138.03 Aligned_cols=98 Identities=21% Similarity=0.221 Sum_probs=85.4
Q ss_pred ceeeccccCChHHHHHHHHH-HHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcc
Q 011973 4 IYYFPAVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPS 82 (474)
Q Consensus 4 ~~~~Ts~~hhplE~li~~~l-~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~ 82 (474)
+++++|.++||+|+++.++. +..|+ ++++ |+.+.++++++..+..+..||||++ |+.+.+.+|+ .++..
T Consensus 161 Pf~~sa~YaHp~E~~~lg~~~~~~p~----~~~~-H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pf----y~ga~ 230 (283)
T KOG0873|consen 161 PFGLSAEYAHPLEHLFLGLGTVMGPA----LLCG-HVITLWIWIALRILETVESHSGYDF-PWSLSKLIPF----YGGAE 230 (283)
T ss_pred chhHhhhhcCHHHHHHcCChhhhhhH----Hhhh-HHHHHHHHHHHHHHHHhhccCCCCC-CccccccCcc----cCCCc
Confidence 67899999999999998654 33343 3544 9999999999999999999999998 9988887764 36899
Q ss_pred hhhhhhhCCCCCcccchhHHHHhcCCCCC
Q 011973 83 YHSLHHTQFRTNYSLFMPIYDYIYGTIDR 111 (474)
Q Consensus 83 ~H~lHHs~~~~NYg~~f~lWDrLFGT~~~ 111 (474)
+||+||..+.+||+..|.+|||++||...
T Consensus 231 ~HD~HH~~f~~n~~~~f~~~D~i~GTd~~ 259 (283)
T KOG0873|consen 231 HHDYHHLVFIGNFASVFGYLDRIHGTDST 259 (283)
T ss_pred ccchhhhhccccccchhHHHHHHhccCcc
Confidence 99999999999999999999999999864
No 7
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.39 E-value=2.5e-12 Score=120.87 Aligned_cols=166 Identities=14% Similarity=0.081 Sum_probs=117.4
Q ss_pred ecCChhHHHHHHhcCcC---------CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccc
Q 011973 280 VDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH 348 (474)
Q Consensus 280 v~GnsltaAvvl~~ip~---------~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~ 348 (474)
|+||++|||++++.+.+ ..++|+++|++| .+|+++++.|+++|.+|.+ |+.++.+.+.+++....+.
T Consensus 1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~ 78 (194)
T cd01078 1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE 78 (194)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 68999999999988875 246999999999 9999999999999999988 8889999888876533222
Q ss_pred ceeee--ccc---cc--CceeEEE----EcCcCChhhhhcCC-CCceeecccccCcc-----CCCCCeeeecCCccccCC
Q 011973 349 NLVLS--TSY---AA--HKTKIWL----VGDDLTGKEQARAP-KGTIFIPYTQIPPR-----KLRKDCFYHSTPAMIIPP 411 (474)
Q Consensus 349 ~l~~~--t~~---~~--~~~~vwi----vg~~i~~~eq~~a~-~G~~f~~~~~v~p~-----~~R~dc~y~~~~am~vP~ 411 (474)
.+... .+. .+ +.++++| .|.. .+.+..+.+ +|.+++|+...|+. +.|+|.++.+++...-|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~-~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~- 156 (194)
T cd01078 79 GVGAVETSDDAARAAAIKGADVVFAAGAAGVE-LLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA- 156 (194)
T ss_pred cEEEeeCCCHHHHHHHHhcCCEEEECCCCCce-echhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe-
Confidence 22211 122 12 6677776 3332 122222333 48999999954443 56899999998733212
Q ss_pred CCccccccccccCcchhHHHHHhhhhhhhcCCCCCccchhhhhHHHHHHHHHhC
Q 011973 412 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRH 465 (474)
Q Consensus 412 ~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~~e~G~iv~~id~iw~aa~kH 465 (474)
...+++|+.+.+||++|.|. +|++..+ .++|-+.|+||
T Consensus 157 ------~~~~g~~~~~~~~~~ae~~~--~~~~~~~--------~~~~~~~~~~~ 194 (194)
T cd01078 157 ------IGVGGLKMKTHRACIAKLFE--SNPLVLD--------AEEIYDLAKEM 194 (194)
T ss_pred ------eccchhHHHHHHHHHHHHhh--cCCeeec--------hHHHHHHHhcC
Confidence 13478999999999999998 4765543 55666666665
No 8
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.21 E-value=1.1e-12 Score=126.58 Aligned_cols=102 Identities=22% Similarity=0.325 Sum_probs=84.1
Q ss_pred ceeeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcch
Q 011973 4 IYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSY 83 (474)
Q Consensus 4 ~~~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~~ 83 (474)
+|++.|.+.||+|-++...+.+. .++++.|.|+-...++..+.++-.+..|||+-+ |...++.+ +-+...|
T Consensus 164 PYayGALyNhP~EGllLDT~G~g---la~l~sglspr~aiifFtfaTiKTVDDHCGy~l-P~dpfqm~-----F~NNa~Y 234 (287)
T KOG0874|consen 164 PYAYGALYNHPVEGLLLDTIGGG---LAFLLSGLSPRTAIIFFTFATIKTVDDHCGYWL-PGDPFQMF-----FPNNAAY 234 (287)
T ss_pred chhhhhhhcCcchhhhhhhhchH---HHHHHcCCCccceEEEEEeeeeeeecccccccc-CCCceeEe-----ccCCchh
Confidence 68999999999999999876332 223477899988888889999999999999987 76444432 3388999
Q ss_pred hhhhhhC--CCCCcc-cchhHHHHhcCCCCCCCh
Q 011973 84 HSLHHTQ--FRTNYS-LFMPIYDYIYGTIDRSSD 114 (474)
Q Consensus 84 H~lHHs~--~~~NYg-~~f~lWDrLFGT~~~~~~ 114 (474)
||+||+. +++||+ .||++||+++||+.+.+-
T Consensus 235 HDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~ 268 (287)
T KOG0874|consen 235 HDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSL 268 (287)
T ss_pred hhhhhhhhccccccCCcHHHHHHHHHhhcCCchh
Confidence 9999998 899999 689999999999987643
No 9
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.10 E-value=2.4e-11 Score=120.58 Aligned_cols=101 Identities=14% Similarity=0.237 Sum_probs=82.6
Q ss_pred eeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcchhh
Q 011973 6 YFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHS 85 (474)
Q Consensus 6 ~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~~H~ 85 (474)
.++|...||++-+...+--.|- .++.+.|..+.++...+..+++++.|.+.-. . +.+.+++|.+|.
T Consensus 171 pfAslafhpidg~lqaip~~I~----~Fi~Plh~~t~L~l~~f~~iwt~~IHd~~~~-------~---l~~~ingaahHt 236 (312)
T KOG0872|consen 171 PFASLAFHPIDGFLQAIPYHIY----PFIFPLHKVTYLSLFTFVNIWTISIHDGIYG-------S---LNPPINGAAHHT 236 (312)
T ss_pred chhhhhcCcchhHhhhchhHhe----eeeecchHHHHHHHHHHHHhHheeeeccccc-------c---ccCccccccccc
Confidence 4678888888887776543332 3367889999999999999999999998654 2 334578999999
Q ss_pred hhhhCCCCCcccchhHHHHhcCCCCCCChhHHHHH
Q 011973 86 LHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKS 120 (474)
Q Consensus 86 lHHs~~~~NYg~~f~lWDrLFGT~~~~~~~~~e~~ 120 (474)
.||..+|.|||.+++||||+|||++.+..++++..
T Consensus 237 vHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d~~ 271 (312)
T KOG0872|consen 237 VHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFDIY 271 (312)
T ss_pred eeeeeEecCCCcEEEeHHhccCcccCccccccchh
Confidence 99999999999999999999999999888766643
No 10
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.16 E-value=2.7e-06 Score=72.45 Aligned_cols=78 Identities=23% Similarity=0.262 Sum_probs=62.1
Q ss_pred cceeeccccCChHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcc
Q 011973 3 NIYYFPAVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPS 82 (474)
Q Consensus 3 ~~~~~Ts~~hhplE~li~~~l~~iPLl~~~~l~g~s~~~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~ 82 (474)
|+.++++.+.+|+|.++..++.. +.+.++++.++.++.++.++..+.+.++|||+.. ...++++++..+|+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~------~~~~~~~~~~~~~~ 107 (114)
T PF04116_consen 37 NPTPLSAFRFHPLEALLLALLPL---LLPLLLLPFHALAFLLGIALFYLWYIFIHSGYHH------RFPPRLRYLFVTPR 107 (114)
T ss_pred ccCchHHHHcChHHHHHHHHHHH---HHHHHHHhHhHHHHHHHHHHHHHHHHHhhcCccC------CCCCcchhHhcCHH
Confidence 46677889999999999876644 2223467899999999999999999999999922 12245677889999
Q ss_pred hhhhhhh
Q 011973 83 YHSLHHT 89 (474)
Q Consensus 83 ~H~lHHs 89 (474)
+|++||+
T Consensus 108 ~H~~HH~ 114 (114)
T PF04116_consen 108 HHDLHHS 114 (114)
T ss_pred HHHhhCc
Confidence 9999996
No 11
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.46 E-value=0.00028 Score=63.42 Aligned_cols=92 Identities=21% Similarity=0.241 Sum_probs=63.6
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE----Ec
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VG 367 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi----vg 367 (474)
..++|+++||. ..|++++.+|.+.|.+ +++ |+.+|.++|.++++... ...+..++..+ ..++++| +|
T Consensus 11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~-~~~~~~~~~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVN-IEAIPLEDLEEALQEADIVINATPSG 86 (135)
T ss_dssp TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCS-EEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccc-cceeeHHHHHHHHhhCCeEEEecCCC
Confidence 57899999995 7999999999988988 777 99999999999983322 11121222222 6678877 44
Q ss_pred -CcCChhhhhcCCCCc-eeecccccCcc
Q 011973 368 -DDLTGKEQARAPKGT-IFIPYTQIPPR 393 (474)
Q Consensus 368 -~~i~~~eq~~a~~G~-~f~~~~~v~p~ 393 (474)
..++++....+++.. +++|.+ +|+.
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla-~Pr~ 113 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLA-VPRD 113 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES--SS-S
T ss_pred CcccCHHHHHHHHhhhhceeccc-cCCC
Confidence 356677775444444 899998 6665
No 12
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.31 E-value=0.00033 Score=69.78 Aligned_cols=46 Identities=26% Similarity=0.321 Sum_probs=42.6
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA 346 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~ 346 (474)
+-|+++||++ -||.|+|+.|++.|.+|++ |+.|||++|+.+++.+.
T Consensus 7 kv~lITGASS--GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~ 54 (246)
T COG4221 7 KVALITGASS--GIGEATARALAEAGAKVVLAARREERLEALADEIGAGA 54 (246)
T ss_pred cEEEEecCcc--hHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCc
Confidence 6789999996 9999999999999999999 99999999999998733
No 13
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.29 E-value=0.0003 Score=70.95 Aligned_cols=50 Identities=16% Similarity=0.240 Sum_probs=45.7
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ 347 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~ 347 (474)
...+.++++||++ -||+++|+.|+++|..|+| |++|||++|++++....+
T Consensus 4 ~~~~~~lITGASs--GIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~ 55 (265)
T COG0300 4 MKGKTALITGASS--GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG 55 (265)
T ss_pred CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC
Confidence 3567899999997 9999999999999999999 999999999999887663
No 14
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.14 E-value=0.0014 Score=65.70 Aligned_cols=125 Identities=16% Similarity=0.149 Sum_probs=77.9
Q ss_pred ecCChhHHHHHH-hcCcCCCcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecc
Q 011973 280 VDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS 355 (474)
Q Consensus 280 v~GnsltaAvvl-~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~ 355 (474)
|||-...++..- .......++|+|+|+ | -+|++++.+|.+.| .+|++ |+.++.+++++++.......+ . .+
T Consensus 104 TD~~G~~~~l~~~~~~~~~~k~vlVlGa-G--g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~-~~ 178 (278)
T PRK00258 104 TDGIGFVRALEERLGVDLKGKRILILGA-G--GAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D-LE 178 (278)
T ss_pred ccHHHHHHHHHhccCCCCCCCEEEEEcC-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c-cc
Confidence 677776666642 123345678999998 6 89999999999999 67888 999999999888653211111 0 11
Q ss_pred c-cc-CceeEEE----EcC----cCChhhhhcCCCCceeecccccCcc-CC----C-CCeeeecCCcccc
Q 011973 356 Y-AA-HKTKIWL----VGD----DLTGKEQARAPKGTIFIPYTQIPPR-KL----R-KDCFYHSTPAMII 409 (474)
Q Consensus 356 ~-~~-~~~~vwi----vg~----~i~~~eq~~a~~G~~f~~~~~v~p~-~~----R-~dc~y~~~~am~v 409 (474)
. +. ..++++| +|- ..+|-+..+.++++.++|++--|.. .+ | +-|.+..+..|-+
T Consensus 179 ~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~ 248 (278)
T PRK00258 179 LQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAKAQGARTIDGLGMLV 248 (278)
T ss_pred chhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCcCeecCCHHHHH
Confidence 1 22 4567777 332 1223334456778888888733322 11 2 5666666666643
No 15
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.08 E-value=0.0018 Score=64.46 Aligned_cols=124 Identities=17% Similarity=0.194 Sum_probs=79.1
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 011973 280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA 357 (474)
Q Consensus 280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~ 357 (474)
|||-....+.--.......+.|+++|+ | -+|+++|..|++.|.+|.+ |+.++.+++.+++.... ... ..+..
T Consensus 99 TD~~G~~~~l~~~~~~~~~k~vliiGa-G--g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~--~~~-~~~~~ 172 (270)
T TIGR00507 99 TDGIGLVSDLERLIPLRPNQRVLIIGA-G--GAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG--EIQ-AFSMD 172 (270)
T ss_pred CCHHHHHHHHHhcCCCccCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC--ceE-Eechh
Confidence 677777666322122334578999999 5 7999999999999999888 88889999888864321 111 11221
Q ss_pred --c-CceeEEE----Ec--CcCC--hhhhhcCCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973 358 --A-HKTKIWL----VG--DDLT--GKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 409 (474)
Q Consensus 358 --~-~~~~vwi----vg--~~i~--~~eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v 409 (474)
. ..++++| +| ..++ +-+....++|.+++|.+=.|++ +.| +.|.+..+..|-+
T Consensus 173 ~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~ 241 (270)
T TIGR00507 173 ELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAKSLGTKTIDGLGMLV 241 (270)
T ss_pred hhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeeeCCHHHHH
Confidence 2 4567777 22 1111 1112345888899999865554 223 6788888777754
No 16
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.04 E-value=0.00055 Score=70.23 Aligned_cols=47 Identities=17% Similarity=0.283 Sum_probs=42.6
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ 347 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~ 347 (474)
.=.+|+|||. .||++.|+-|||||.+|.| |+++||+.+++|+.+...
T Consensus 50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~ 98 (312)
T KOG1014|consen 50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK 98 (312)
T ss_pred CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC
Confidence 5567889998 9999999999999999999 999999999999877654
No 17
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.86 E-value=0.0022 Score=68.13 Aligned_cols=151 Identities=17% Similarity=0.258 Sum_probs=95.7
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec-
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG- 367 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg- 367 (474)
...++|+++|+ | .+|+.++++|...|. +|++ |+.++.+.++++++.. .+...+.. . +.++++| .|
T Consensus 180 ~~~~~vlViGa-G--~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~----~~~~~~~~~~l~~aDvVI~aT~s 252 (423)
T PRK00045 180 LSGKKVLVIGA-G--EMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE----AIPLDELPEALAEADIVISSTGA 252 (423)
T ss_pred ccCCEEEEECc-h--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc----EeeHHHHHHHhccCCEEEECCCC
Confidence 35679999998 6 999999999998897 6776 8888988898886532 12122222 2 5566766 22
Q ss_pred --CcCChhhhhcC-----CCCceeecccccCcc---CCC--CCeeeecCCccccCCCCccccc-cccccCcchhHHHHHh
Q 011973 368 --DDLTGKEQARA-----PKGTIFIPYTQIPPR---KLR--KDCFYHSTPAMIIPPSLSNMHS-CENWLGRRVMSAWRIA 434 (474)
Q Consensus 368 --~~i~~~eq~~a-----~~G~~f~~~~~v~p~---~~R--~dc~y~~~~am~vP~~~~~~~~-~e~~~prr~~~Ac~a~ 434 (474)
-.+++++...+ .++.+++|.+ +|+. ++. +++.+. +++.+.. ++.....|.-.+-.|+
T Consensus 253 ~~~~i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~---------~vDdl~~~~~~n~~~r~~~~~~a~ 322 (423)
T PRK00045 253 PHPIIGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLY---------DVDDLQEIVEENLAQRQEAAEKAE 322 (423)
T ss_pred CCcEEcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEE---------EHHHHHHHHHhhHHHHHHHHHHHH
Confidence 24556655443 3567899998 6654 121 233211 1222222 4456667888889999
Q ss_pred hhhh----hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 011973 435 GIIH----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 463 (474)
Q Consensus 435 ~~v~----alEgw~~~-e~G~-i--v-~~id~iw~aa~ 463 (474)
.||- .|+.|... .... | + +++++|-+.-+
T Consensus 323 ~ii~~~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el 360 (423)
T PRK00045 323 AIVEEEVAEFMEWLRSLEVVPTIRALREQAEEIREEEL 360 (423)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 9986 67788655 6666 5 4 66666655443
No 18
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.80 E-value=0.01 Score=60.97 Aligned_cols=140 Identities=15% Similarity=0.120 Sum_probs=87.8
Q ss_pred cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973 244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 314 (474)
Q Consensus 244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~ 314 (474)
.|+|+++-=-=|....+-.--++.+.-.|+ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- .+|+
T Consensus 64 ~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a~ 140 (325)
T PRK08618 64 LGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQAK 140 (325)
T ss_pred EEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHHH
Confidence 588887753223211222111234444444 45589999999985 3334555 5678899999998 6999
Q ss_pred HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcCcCC-hh-hhhcCCCCceeec
Q 011973 315 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLT-GK-EQARAPKGTIFIP 386 (474)
Q Consensus 315 ava~~L~-~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~~i~-~~-eq~~a~~G~~f~~ 386 (474)
+.+.+|+ .+++ +|.+ |++++.+++.+++..+.+..+....+++ . ++++++|....-. |. + .+.++|++++.
T Consensus 141 ~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~ 219 (325)
T PRK08618 141 GQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKKGVHINA 219 (325)
T ss_pred HHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCCCcEEEe
Confidence 9999887 4454 4444 9999999998876544333322233444 3 7788877433222 21 2 57799999987
Q ss_pred c
Q 011973 387 Y 387 (474)
Q Consensus 387 ~ 387 (474)
+
T Consensus 220 i 220 (325)
T PRK08618 220 V 220 (325)
T ss_pred c
Confidence 7
No 19
>PLN00203 glutamyl-tRNA reductase
Probab=96.79 E-value=0.0049 Score=67.63 Aligned_cols=209 Identities=14% Similarity=0.200 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHcCCcEEEec-cccc-cccccccCceeeecCCCCcceeeecCChhHHHHHHhc----CcC---CCcEEE
Q 011973 232 SLIEEAILEADAKGVKVISLG-LLNQ-GEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNS----LPK---TTAHVL 302 (474)
Q Consensus 232 ~~Ie~Ai~~A~k~G~kV~~LG-~ln~-~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~----ip~---~~~~V~ 302 (474)
.+|-+|...|++.|.- | .||. ++. .+.+.|.-. =+..+-.|..=.+.++++- .+. ..++|+
T Consensus 201 gQVK~A~~~A~~~g~~----g~~L~~LF~~-----Ai~~~KrVR-teT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkVl 270 (519)
T PLN00203 201 AQVKQVVKVGQGVDGF----GRNLSGLFKH-----AITAGKRVR-TETNIASGAVSVSSAAVELALMKLPESSHASARVL 270 (519)
T ss_pred HHHHHHHHHHHHcCCc----cHHHHHHHHH-----HHHHHHHHh-hccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEEE
Confidence 4578888899888752 3 2222 111 223333322 1234444443333333332 232 368999
Q ss_pred EeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE----cC-cCCh
Q 011973 303 LRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GD-DLTG 372 (474)
Q Consensus 303 l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----g~-~i~~ 372 (474)
|+|+ | .+|+++++.|..+|. +|++ |+.++.+.|+++++. .........+.. . ..++++|. ++ .+++
T Consensus 271 VIGA-G--~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~ 346 (519)
T PLN00203 271 VIGA-G--KMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKPLDEMLACAAEADVVFTSTSSETPLFLK 346 (519)
T ss_pred EEeC-H--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeecHhhHHHHHhcCCEEEEccCCCCCeeCH
Confidence 9999 6 999999999998886 5777 999999999988752 111111111222 2 66777662 22 5777
Q ss_pred hhhhcCCC-------CceeecccccCcc-C--CC--CCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhhh--
Q 011973 373 KEQARAPK-------GTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-- 438 (474)
Q Consensus 373 ~eq~~a~~-------G~~f~~~~~v~p~-~--~R--~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~-- 438 (474)
+..+.+++ ..+|+|.+ +|+. + +. +++.+.. -+|++. .++-.+..|.-.+=.|+.||-
T Consensus 347 e~l~~~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lyd------iDdL~~--i~~~n~~~R~~~~~~Ae~II~ee 417 (519)
T PLN00203 347 EHVEALPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYN------VDDLKE--VVAANKEDRLRKAMEAQTIIREE 417 (519)
T ss_pred HHHHHhhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEE------eccHHH--HHHHhHHHHHHHHHHHHHHHHHH
Confidence 77777654 25899999 8875 2 21 2222111 112332 245566777767777888775
Q ss_pred --hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 011973 439 --ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 463 (474)
Q Consensus 439 --alEgw~~~-e~G~-i--v-~~id~iw~aa~ 463 (474)
.|+.|... +... | + ++.+.|-+.-+
T Consensus 418 ~~~F~~w~~~~~~~p~I~~lr~~~~~i~~~El 449 (519)
T PLN00203 418 SKNFEAWRDSLETVPTIKKLRSYAERIRAAEL 449 (519)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 78888766 6777 5 4 67766655443
No 20
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.67 E-value=0.0043 Score=56.61 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.2
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 337 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~ 337 (474)
|+|.|||| .+|+.+++.|.++|.+|.. |++++.++
T Consensus 1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~~~~~ 37 (183)
T PF13460_consen 1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPSKAED 37 (183)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence 78999999 9999999999999999999 88887766
No 21
>PRK09186 flagellin modification protein A; Provisional
Probab=96.62 E-value=0.0046 Score=59.12 Aligned_cols=44 Identities=18% Similarity=0.249 Sum_probs=38.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 4 ~k~vlItGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~ 49 (256)
T PRK09186 4 GKTILITGAGG--LIGSALVKAILEAGGIVIAADIDKEALNELLESLG 49 (256)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 88888888777654
No 22
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.50 E-value=0.011 Score=52.99 Aligned_cols=123 Identities=15% Similarity=0.137 Sum_probs=72.4
Q ss_pred cCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 011973 281 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA 357 (474)
Q Consensus 281 ~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~ 357 (474)
||-.+..|.--..+....++|.++|+ | .+|+++++.|++.| .+|.+ |+.++.+++.+++.... .. ...++.+
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~-G--~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~ 76 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGA-G--GAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IA-IAYLDLE 76 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cc-eeecchh
Confidence 44444444443344455688999998 7 89999999999885 67777 88888888887754321 00 1122222
Q ss_pred -c-CceeEEEE--cCcC---Chh--hhhcCCCCceeecccccCcc-----CCC-CCeeeecCCccc
Q 011973 358 -A-HKTKIWLV--GDDL---TGK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMI 408 (474)
Q Consensus 358 -~-~~~~vwiv--g~~i---~~~--eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~ 408 (474)
. .+++++|. .... ++. ....+++|++++|.+-+|+. ..| ..+.+..+..|-
T Consensus 77 ~~~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~ 142 (155)
T cd01065 77 ELLAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEML 142 (155)
T ss_pred hccccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHH
Confidence 2 56667662 1111 110 11235788888888766552 223 456565555553
No 23
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.48 E-value=0.0071 Score=61.63 Aligned_cols=171 Identities=21% Similarity=0.246 Sum_probs=104.3
Q ss_pred HHHHHHHHcCCcEEEecccccccccccc--CceeeecCCCCcceeeecCChhHHHHHHhcCcCC--CcEEEEeccCCCch
Q 011973 236 EAILEADAKGVKVISLGLLNQGEELNRN--GEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT--TAHVLLRGTVTANK 311 (474)
Q Consensus 236 ~Ai~~A~k~G~kV~~LG~ln~~e~ln~~--g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~~--~~~V~l~Gatg~~k 311 (474)
+|+..+|+.--.--..|+-|- +... |. .+-=| |||-.+.-+-.-..++.. .++|++.||-|
T Consensus 72 ~~~~~lD~l~~~A~~iGAVNT---l~~~~~g~-l~G~N--------TD~~G~~~~L~~~~~~~~~~~~~vlilGAGG--- 136 (283)
T COG0169 72 AALPLLDELSPRARLIGAVNT---LVREDDGK-LRGYN--------TDGIGFLRALKEFGLPVDVTGKRVLILGAGG--- 136 (283)
T ss_pred HHHHHHhcCCHHHHHhCCceE---EEEccCCE-EEEEc--------CCHHHHHHHHHhcCCCcccCCCEEEEECCcH---
Confidence 444445554444445566676 4333 33 23333 677777766665565554 48999999998
Q ss_pred hHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecc---cccC-ceeEEE----EcCcCCh----hhhh
Q 011973 312 VANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS---YAAH-KTKIWL----VGDDLTG----KEQA 376 (474)
Q Consensus 312 ig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~---~~~~-~~~vwi----vg~~i~~----~eq~ 376 (474)
-++||+..|.+.|+ ++++ |+.+|.++|++..++... . ++... .+.. +.+++| +|-.-.+ -+-.
T Consensus 137 AarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~-~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~ 214 (283)
T COG0169 137 AARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-A-VEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAE 214 (283)
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-c-cccccccccccccccCEEEECCCCCCCCCCCCCCCcHH
Confidence 68999999999995 5777 999999999998765432 1 11112 2222 467777 2221111 0012
Q ss_pred cCCCCceeecccccCcc-----CCC-CCeeeecCCccccCCCCccccccccccCcc
Q 011973 377 RAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNMHSCENWLGRR 426 (474)
Q Consensus 377 ~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~vP~~~~~~~~~e~~~prr 426 (474)
-.++++++.|+.=.|.+ ..| +=|.+.++..|-+- |+..+++.|.+.+
T Consensus 215 ~l~~~~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~---Qaa~aF~lwtg~~ 267 (283)
T COG0169 215 LLPKGAIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVH---QAAEAFELWTGVE 267 (283)
T ss_pred hcCcCCEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHH---HHHHHHHHHhCCC
Confidence 34888889888855544 223 56778888777664 4455555665443
No 24
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.40 E-value=0.0084 Score=56.53 Aligned_cols=85 Identities=15% Similarity=0.142 Sum_probs=56.5
Q ss_pred hhHHHHHHhcCcC--CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccC
Q 011973 284 SLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH 359 (474)
Q Consensus 284 sltaAvvl~~ip~--~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~ 359 (474)
.+++.-.++++.. ..++|+|+|+.. -+|..+|.+|.++|.+|++ |+.+ ++++.+ +
T Consensus 28 ~~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~~---~l~~~l----------------~ 86 (168)
T cd01080 28 PAGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKTK---NLKEHT----------------K 86 (168)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCch---hHHHHH----------------h
Confidence 4455555555643 689999999963 3699999999999999888 4432 222221 1
Q ss_pred ceeEEE----EcCcCChhhhhcCCCCceeecccccCcc
Q 011973 360 KTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR 393 (474)
Q Consensus 360 ~~~vwi----vg~~i~~~eq~~a~~G~~f~~~~~v~p~ 393 (474)
.++++| ..+.+++++. ++|++++|++ +|+.
T Consensus 87 ~aDiVIsat~~~~ii~~~~~---~~~~viIDla-~prd 120 (168)
T cd01080 87 QADIVIVAVGKPGLVKGDMV---KPGAVVIDVG-INRV 120 (168)
T ss_pred hCCEEEEcCCCCceecHHHc---cCCeEEEEcc-CCCc
Confidence 334444 1124666654 7899999999 7774
No 25
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.36 E-value=0.011 Score=59.88 Aligned_cols=127 Identities=15% Similarity=0.102 Sum_probs=74.3
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcccccc-ceeeecc
Q 011973 280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQH-NLVLSTS 355 (474)
Q Consensus 280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~-~l~~~t~ 355 (474)
|||-....+.--.......++|++.|+-| .|+|+|..|++.|+ ++++ |+.++.+.|.+++...... .+....+
T Consensus 109 TD~~G~~~~l~~~~~~~~~k~vlIlGaGG---aaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~ 185 (284)
T PRK12549 109 TDWSGFAESFRRGLPDASLERVVQLGAGG---AGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD 185 (284)
T ss_pred CCHHHHHHHHHhhccCccCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc
Confidence 56665555543211223457899999985 99999999999998 6777 8999999998876443211 1111112
Q ss_pred cc-c-CceeEEE----EcCcC---ChhhhhcCCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973 356 YA-A-HKTKIWL----VGDDL---TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 409 (474)
Q Consensus 356 ~~-~-~~~~vwi----vg~~i---~~~eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v 409 (474)
.. . ++++++| +|-.- .|-+..+.+++..+.|++--|+. .-| +-|....+..|-+
T Consensus 186 ~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~ML~ 254 (284)
T PRK12549 186 LAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETELLRAARALGCRTLDGGGMAV 254 (284)
T ss_pred hHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCHHHHHHHHCCCeEecCHHHHH
Confidence 22 2 5677777 33110 11122345677777777733322 112 4566666666644
No 26
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.32 E-value=0.025 Score=57.50 Aligned_cols=125 Identities=16% Similarity=0.167 Sum_probs=77.4
Q ss_pred HHHHcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHH
Q 011973 240 EADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVA 317 (474)
Q Consensus 240 ~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava 317 (474)
.|+++|++|+.+-..+. +. ..|. +.+ -..+.+.+++..+ -..++|.++|. | .+|+++|
T Consensus 108 ~a~~~gi~v~~~~~~~~---va-------~~n~----~~~---Ae~ai~~al~~~~~~l~gk~v~IiG~-G--~iG~avA 167 (287)
T TIGR02853 108 LAADAGVKLIELFERDD---VA-------IYNS----IPT---AEGAIMMAIEHTDFTIHGSNVMVLGF-G--RTGMTIA 167 (287)
T ss_pred HHHHCCCeEEEEEeccc---eE-------EEcc----HhH---HHHHHHHHHHhcCCCCCCCEEEEEcC-h--HHHHHHH
Confidence 67888999887766332 21 1110 111 1223344454433 24679999999 4 8999999
Q ss_pred HHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc---CcCChhhhhcCCCCceeecccc
Q 011973 318 SSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---DDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 318 ~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg---~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
+.|...|.+|++ |+.++.+.+++. .. ..+...++++ ++++++|.- ..++.+...++++|++++|.+-
T Consensus 168 ~~L~~~G~~V~v~~R~~~~~~~~~~~-g~----~~~~~~~l~~~l~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas 241 (287)
T TIGR02853 168 RTFSALGARVFVGARSSADLARITEM-GL----IPFPLNKLEEKVAEIDIVINTIPALVLTADVLSKLPKHAVIIDLAS 241 (287)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHC-CC----eeecHHHHHHHhccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCc
Confidence 999999999998 777766655432 11 1111112222 566776632 2356777888999999999993
No 27
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.24 E-value=0.014 Score=64.71 Aligned_cols=59 Identities=19% Similarity=0.363 Sum_probs=49.1
Q ss_pred CChhHHHHHHhcCcC-----CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 282 GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 282 GnsltaAvvl~~ip~-----~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
|.+.....+.+.+|+ +.+.|+|+||+| .||+++++.|+++|.+|.+ |+.++.+.+.+++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l 124 (576)
T PLN03209 59 GATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV 124 (576)
T ss_pred cchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 566666777788875 356899999999 9999999999999999987 8989888776654
No 28
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.17 E-value=0.036 Score=56.71 Aligned_cols=132 Identities=13% Similarity=0.045 Sum_probs=88.8
Q ss_pred cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcCcCCCcEEEEeccCCCchhHHH
Q 011973 244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVANA 315 (474)
Q Consensus 244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~ip~~~~~V~l~Gatg~~kig~a 315 (474)
.|+|+++-+ . |+-.++.+.-+|+ +.-..+.||+.+|+ |+..+-..++.+.+.++|+- ..|+.
T Consensus 62 ~g~K~~~~~---~----~~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~~ 131 (301)
T PRK06407 62 AGLKTYIAG---R----NGARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAET 131 (301)
T ss_pred eEEEEEecC---C----CCccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHHH
Confidence 577876642 1 1222334444444 34489999999986 45556567788999999987 89999
Q ss_pred HHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE----EcCc-CChhhhhcCCCCcee
Q 011973 316 VASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL----VGDD-LTGKEQARAPKGTIF 384 (474)
Q Consensus 316 va~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi----vg~~-i~~~eq~~a~~G~~f 384 (474)
-++++| +.-.+|.+ |++++.+.+.+++....+..+.-+.+.+ + ++++|++ ..+. ++.+ |.+||+|+
T Consensus 132 ~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~---~l~pg~hV 208 (301)
T PRK06407 132 QLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRK---YLGDEYHV 208 (301)
T ss_pred HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHH---HcCCCceE
Confidence 999999 55556666 9999999999887754443423334554 3 7888877 2222 3344 44789998
Q ss_pred eccc
Q 011973 385 IPYT 388 (474)
Q Consensus 385 ~~~~ 388 (474)
..+-
T Consensus 209 ~aiG 212 (301)
T PRK06407 209 NLAG 212 (301)
T ss_pred EecC
Confidence 8873
No 29
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.16 E-value=0.031 Score=57.31 Aligned_cols=140 Identities=19% Similarity=0.107 Sum_probs=85.0
Q ss_pred HcCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973 243 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 313 (474)
Q Consensus 243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig 313 (474)
-.|+|+++.--=|....+..--++.+.-+|. +.-+-+.||+.+|+ |++.+-+ |++...+.++|+- ..|
T Consensus 64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~QA 140 (313)
T PF02423_consen 64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQA 140 (313)
T ss_dssp EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HHH
T ss_pred EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HHH
Confidence 4688888854444433343333444444443 34488999999984 3333333 6678899999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE----cC---cCChhhhhcCCC
Q 011973 314 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GD---DLTGKEQARAPK 380 (474)
Q Consensus 314 ~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----g~---~i~~~eq~~a~~ 380 (474)
+.-+++|+ +.-.+|.+ |++++.+++.+++.. .+..+..+.+.+ + ++++|++. .+ .++.+ |.++
T Consensus 141 ~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~---~l~~ 216 (313)
T PF02423_consen 141 RWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAE---WLKP 216 (313)
T ss_dssp HHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GG---GS-T
T ss_pred HHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHH---HcCC
Confidence 99999998 55445555 999999999999777 455544455554 4 88888772 22 34444 5599
Q ss_pred Cceeecccc
Q 011973 381 GTIFIPYTQ 389 (474)
Q Consensus 381 G~~f~~~~~ 389 (474)
|+|+..+.-
T Consensus 217 g~hi~~iGs 225 (313)
T PF02423_consen 217 GTHINAIGS 225 (313)
T ss_dssp T-EEEE-S-
T ss_pred CcEEEEecC
Confidence 999988875
No 30
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.16 E-value=0.059 Score=55.55 Aligned_cols=140 Identities=18% Similarity=0.159 Sum_probs=90.6
Q ss_pred HcCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973 243 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 313 (474)
Q Consensus 243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig 313 (474)
-.|+|+++.--=|....|-.-.++.+.-+|. +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- ..|
T Consensus 64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~qA 140 (325)
T TIGR02371 64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQA 140 (325)
T ss_pred eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHH
Confidence 4788988863333323333334445555555 45589999999985 2333545 5678899999986 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE-c---Cc-CChhhhhcCCCCc
Q 011973 314 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV-G---DD-LTGKEQARAPKGT 382 (474)
Q Consensus 314 ~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv-g---~~-i~~~eq~~a~~G~ 382 (474)
++-+++|+ +...+|.+ |++++.+.+.+++.+ .+.....+++.+ + ++++|++. - +. ++++ |.+||+
T Consensus 141 ~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~-~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~---~l~~g~ 216 (325)
T TIGR02371 141 WTQLEALSRVFDLEEVSVYCRTPSTREKFALRASD-YEVPVRAATDPREAVEGCDILVTTTPSRKPVVKAD---WVSEGT 216 (325)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh-hCCcEEEeCCHHHHhccCCEEEEecCCCCcEecHH---HcCCCC
Confidence 99888877 66667777 999999999887652 222222233454 3 77877662 1 22 2333 459999
Q ss_pred eeecccc
Q 011973 383 IFIPYTQ 389 (474)
Q Consensus 383 ~f~~~~~ 389 (474)
+++.+..
T Consensus 217 ~v~~vGs 223 (325)
T TIGR02371 217 HINAIGA 223 (325)
T ss_pred EEEecCC
Confidence 9998863
No 31
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.15 E-value=0.008 Score=64.15 Aligned_cols=210 Identities=12% Similarity=0.103 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 011973 230 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 304 (474)
Q Consensus 230 in~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~-----~~~~V~l~ 304 (474)
|=.+|-+|...|.+.|.-=--|..+=+ . .+.+.|.-. =+.++-.|..=.+.++++-..+ ..++|+|+
T Consensus 116 IlgQVK~A~~~A~~~g~~g~~L~~lf~-~------A~~~aKrVr-teT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi 187 (414)
T PRK13940 116 ILGQVKDSYTLSKKNHAIGKELDRVFQ-K------VFATAKRVR-SETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII 187 (414)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHH-H------HHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence 445588999999998863222211111 1 223334422 2355555655455555554433 45789999
Q ss_pred ccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcC-----cCChhh
Q 011973 305 GTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGD-----DLTGKE 374 (474)
Q Consensus 305 Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~-----~i~~~e 374 (474)
|+ | .+|+++|.+|+..|+ ++++ |+.++-++|.++++... ......+. . ..++++|... .|+.++
T Consensus 188 Ga-G--~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~---~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~ 261 (414)
T PRK13940 188 GA-G--QTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS---AHYLSELPQLIKKADIIIAAVNVLEYIVTCKY 261 (414)
T ss_pred cC-c--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe---EecHHHHHHHhccCCEEEECcCCCCeeECHHH
Confidence 99 5 899999999999986 4666 88899999998875321 12111222 2 6677777222 245544
Q ss_pred hhcCCCCceeecccccCcc-C--CC--CCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhhh----hhcCCCC
Q 011973 375 QARAPKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDL 445 (474)
Q Consensus 375 q~~a~~G~~f~~~~~v~p~-~--~R--~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~----alEgw~~ 445 (474)
.. .+..+++|.+ +|+. + +. +++.+..-- +++. .++-.+..|...+=.|+.||- .|+.|..
T Consensus 262 ~~--~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iD------dl~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~ 330 (414)
T PRK13940 262 VG--DKPRVFIDIS-IPQALDPKLGELEQNVYYCVD------DINA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEK 330 (414)
T ss_pred hC--CCCeEEEEeC-CCCCCCccccCcCCeEEEeHH------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 3457999999 7766 2 21 233222111 1111 133345566666667777765 6777865
Q ss_pred C-ccch-h--h-hhHHHHHHHHHh
Q 011973 446 N-ECGQ-T--M-CDIHQVWHASLR 464 (474)
Q Consensus 446 ~-e~G~-i--v-~~id~iw~aa~k 464 (474)
. .+.. | + ++.++|-+..++
T Consensus 331 ~~~~~p~I~~lr~~~~~i~~~el~ 354 (414)
T PRK13940 331 AIISNSAIKELFQKADGLVDLSLE 354 (414)
T ss_pred hccchHHHHHHHHHHHHHHHHHHH
Confidence 5 5666 5 4 777777554443
No 32
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.07 E-value=0.02 Score=58.00 Aligned_cols=62 Identities=16% Similarity=0.190 Sum_probs=44.2
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhCcc
Q 011973 280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRIPV 344 (474)
Q Consensus 280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~---~~~~~l~~~~~~ 344 (474)
|||.-...+.--.......+.|+++|| | -+|+|+|..|.+.|.+ |.+ |+. ++.+++.+++..
T Consensus 108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-G--GagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~ 175 (289)
T PRK12548 108 TDGLGFVRNLREHGVDVKGKKLTVIGA-G--GAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ 175 (289)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh
Confidence 556555554432233334578999999 4 6999999999999987 877 775 678887777643
No 33
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.07 E-value=0.018 Score=58.03 Aligned_cols=61 Identities=16% Similarity=0.102 Sum_probs=43.3
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCceeEEEEcCcCChhhhhc
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR 377 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwivg~~i~~~eq~~ 377 (474)
+|+|+|||| -||+.+++.|.++|.+|.. |+.++...++.. . ..|+.||..+++++..
T Consensus 2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~------------------~-v~~v~~Dl~d~~~l~~ 60 (317)
T CHL00194 2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW------------------G-AELVYGDLSLPETLPP 60 (317)
T ss_pred EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc------------------C-CEEEECCCCCHHHHHH
Confidence 699999999 9999999999999999887 765544333210 1 1245667777766666
Q ss_pred CCCC
Q 011973 378 APKG 381 (474)
Q Consensus 378 a~~G 381 (474)
|-+|
T Consensus 61 al~g 64 (317)
T CHL00194 61 SFKG 64 (317)
T ss_pred HHCC
Confidence 5555
No 34
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.05 E-value=0.054 Score=55.34 Aligned_cols=138 Identities=12% Similarity=0.087 Sum_probs=89.7
Q ss_pred cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973 244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 314 (474)
Q Consensus 244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~ 314 (474)
.|+|+++.--=|..+.|..-.++.+.-+|+ +.-.-+.||+.+|+ |++.+-+ +++.++|.++|+- ..|+
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa~ 138 (304)
T PRK07340 62 AITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQAR 138 (304)
T ss_pred cEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHHH
Confidence 588887743333333333333445555554 45599999999985 3444555 5678899999994 8999
Q ss_pred HHHHHHhc-cC-cEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE----EcCcCChhhhhcCCCCcee
Q 011973 315 AVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL----VGDDLTGKEQARAPKGTIF 384 (474)
Q Consensus 315 ava~~L~~-~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi----vg~~i~~~eq~~a~~G~~f 384 (474)
+.+++||. ++ .++.+ |++++.+++.+++... ... +...+.+ + ++++|+| ..+.+=.. |.+||+|+
T Consensus 139 ~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~-~~~-~~~~~~~~av~~aDiVitaT~s~~Pl~~~---~~~~g~hi 213 (304)
T PRK07340 139 AHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL-GPT-AEPLDGEAIPEAVDLVVTATTSRTPVYPE---AARAGRLV 213 (304)
T ss_pred HHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-CCe-eEECCHHHHhhcCCEEEEccCCCCceeCc---cCCCCCEE
Confidence 99999983 55 45666 9999999999887532 112 1233444 3 7778777 22222222 34899999
Q ss_pred ecccc
Q 011973 385 IPYTQ 389 (474)
Q Consensus 385 ~~~~~ 389 (474)
..+.-
T Consensus 214 ~~iGs 218 (304)
T PRK07340 214 VAVGA 218 (304)
T ss_pred EecCC
Confidence 98863
No 35
>PLN02434 fatty acid hydroxylase
Probab=96.05 E-value=0.011 Score=58.90 Aligned_cols=32 Identities=25% Similarity=0.550 Sum_probs=28.2
Q ss_pred cchhhhhhhC-CCCCcccchhHHHHhcCCCCCC
Q 011973 81 PSYHSLHHTQ-FRTNYSLFMPIYDYIYGTIDRS 112 (474)
Q Consensus 81 P~~H~lHHs~-~~~NYg~~f~lWDrLFGT~~~~ 112 (474)
=++|..||-+ .+.|||...++|||+|||+.++
T Consensus 198 kr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~~~ 230 (237)
T PLN02434 198 KKYHLNHHFRDQDKGFGITSSLWDRVFGTLPPS 230 (237)
T ss_pred HHHHHHHcCCCCCCCCCcCchHHHHhcCCCCCc
Confidence 5799999966 7999999999999999999543
No 36
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.95 E-value=0.016 Score=55.23 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=36.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
+.|+++|++| .||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 49 (250)
T PRK08063 5 KVALVTGSSR--GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI 49 (250)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 5899999998 9999999999999999765 7777777776664
No 37
>PRK06196 oxidoreductase; Provisional
Probab=95.94 E-value=0.015 Score=58.31 Aligned_cols=56 Identities=16% Similarity=0.126 Sum_probs=45.9
Q ss_pred HHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 286 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 286 taAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
++..+++.++...+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~ 71 (315)
T PRK06196 14 TAEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPARRPDVAREALAGID 71 (315)
T ss_pred cHHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh
Confidence 35555666665567899999998 9999999999999999998 88888887776653
No 38
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.90 E-value=0.013 Score=59.91 Aligned_cols=148 Identities=16% Similarity=0.186 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 011973 230 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 304 (474)
Q Consensus 230 in~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~-----~~~~V~l~ 304 (474)
|=.++.+|...|++.|.-=- .||. |= ..-+.+.|.-. -+..+-.|..=++..+++...+ ..++|+++
T Consensus 113 IlgQvk~A~~~a~~~g~~~~---~L~~---lf-~~a~~~~k~vr-~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~Vi 184 (311)
T cd05213 113 ILGQVKNAYKLAKEAGTSGK---LLNR---LF-QKAIKVGKRVR-TETGISRGAVSISSAAVELAEKIFGNLKGKKVLVI 184 (311)
T ss_pred HHHHHHHHHHHHHHcCCchH---HHHH---HH-HHHHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEE
Confidence 44458899999999886311 1222 00 00112222211 1234444432233333444433 47889999
Q ss_pred ccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcCcCC-h----hh
Q 011973 305 GTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLT-G----KE 374 (474)
Q Consensus 305 Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~~i~-~----~e 374 (474)
|+ | .+|+.++++|++.| .+|++ |+.++.++++++++.. .+...+.. . ..++++|.-..-. + ++
T Consensus 185 Ga-G--~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~----~~~~~~~~~~l~~aDvVi~at~~~~~~~~~~~ 257 (311)
T cd05213 185 GA-G--EMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN----AVPLDELLELLNEADVVISATGAPHYAKIVER 257 (311)
T ss_pred Cc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe----EEeHHHHHHHHhcCCEEEECCCCCchHHHHHH
Confidence 98 6 99999999999766 56666 8889999999887642 12122232 2 5667766322211 1 11
Q ss_pred hh-cC-CCCceeecccccCcc
Q 011973 375 QA-RA-PKGTIFIPYTQIPPR 393 (474)
Q Consensus 375 q~-~a-~~G~~f~~~~~v~p~ 393 (474)
.. .. .+|.+++|.+ +|+.
T Consensus 258 ~~~~~~~~~~~viDla-vPrd 277 (311)
T cd05213 258 AMKKRSGKPRLIVDLA-VPRD 277 (311)
T ss_pred HHhhCCCCCeEEEEeC-CCCC
Confidence 11 11 2578899998 6655
No 39
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.016 Score=55.40 Aligned_cols=47 Identities=21% Similarity=0.269 Sum_probs=40.9
Q ss_pred CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
++...+.|+++|++| -||+++|+.|+++|.+|++ |++++++++++++
T Consensus 5 ~~~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 53 (258)
T PRK06949 5 INLEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRAEI 53 (258)
T ss_pred cCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 334568999999998 9999999999999999988 8889988887765
No 40
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.019 Score=56.12 Aligned_cols=45 Identities=16% Similarity=0.193 Sum_probs=39.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+.++++|+++ -||+++|+.|+++|.+|.+ |++++++++++++..
T Consensus 8 ~k~~lItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (263)
T PRK08339 8 GKLAFTTASSK--GIGFGVARVLARAGADVILLSRNEENLKKAREKIKS 54 (263)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46789999997 9999999999999999998 888898888877543
No 41
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.81 E-value=0.034 Score=56.66 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=59.9
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--c-Cc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G-DD 369 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv--g-~~ 369 (474)
..++|+|+|+ | .+|++++..|.+.|.+|++ |+.++.+..++ ++... +...+..+ +.++++|. . ..
T Consensus 151 ~g~kvlViG~-G--~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~----~~~~~l~~~l~~aDiVI~t~p~~~ 222 (296)
T PRK08306 151 HGSNVLVLGF-G--RTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSP----FHLSELAEEVGKIDIIFNTIPALV 222 (296)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCee----ecHHHHHHHhCCCCEEEECCChhh
Confidence 4689999997 5 8999999999999999998 66666554433 22111 21112222 56677662 2 23
Q ss_pred CChhhhhcCCCCceeecccccCc
Q 011973 370 LTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 370 i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
++.+...++++|++++|++ ..|
T Consensus 223 i~~~~l~~~~~g~vIIDla-~~p 244 (296)
T PRK08306 223 LTKEVLSKMPPEALIIDLA-SKP 244 (296)
T ss_pred hhHHHHHcCCCCcEEEEEc-cCC
Confidence 6677778899999999999 444
No 42
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.76 E-value=0.012 Score=59.87 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=40.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+.|+++||+| -||+++|+.|+++|.+|.+ |++++++++++++..
T Consensus 53 g~~~lITGAs~--GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~ 99 (320)
T PLN02780 53 GSWALVTGPTD--GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS 99 (320)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
Confidence 46799999997 9999999999999999998 999999998887643
No 43
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.74 E-value=0.022 Score=54.29 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=38.2
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.|+++|++| .||+++|+.|.++|.+|.+ |++++.+++++++.
T Consensus 5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 49 (258)
T PRK12429 5 KVALVTGAAS--GIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQ 49 (258)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence 6899999998 9999999999999999988 88888888777653
No 44
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.023 Score=54.08 Aligned_cols=44 Identities=20% Similarity=0.341 Sum_probs=37.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (241)
T PRK07454 6 MPRALITGASS--GIGKATALAFAKAGWDLALVARSQDALEALAAELR 51 (241)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 88888777766643
No 45
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.72 E-value=0.09 Score=53.86 Aligned_cols=138 Identities=21% Similarity=0.197 Sum_probs=85.5
Q ss_pred cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973 244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 314 (474)
Q Consensus 244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~ 314 (474)
.|+|+++.--=|....+-.--++.+.-+++ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+ | ..|+
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G--~~a~ 138 (314)
T PRK06141 62 IGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-G--RLAS 138 (314)
T ss_pred eEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-c--HHHH
Confidence 588988843323222222222345555554 35589999999974 2333333 567889999996 5 8999
Q ss_pred HHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE----cCc-CChhhhhcCCCCce
Q 011973 315 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GDD-LTGKEQARAPKGTI 383 (474)
Q Consensus 315 ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----g~~-i~~~eq~~a~~G~~ 383 (474)
.++++|+ +...+|.+ |++++.+++.+++... +....-..+.+ + ++++|++. .+. ++. .+.++|++
T Consensus 139 ~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~-g~~~~~~~~~~~av~~aDIVi~aT~s~~pvl~~---~~l~~g~~ 214 (314)
T PRK06141 139 LLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ-GFDAEVVTDLEAAVRQADIISCATLSTEPLVRG---EWLKPGTH 214 (314)
T ss_pred HHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEeCCHHHHHhcCCEEEEeeCCCCCEecH---HHcCCCCE
Confidence 9999888 44466777 9999999999886542 11212123433 3 67777662 111 222 35689997
Q ss_pred eeccc
Q 011973 384 FIPYT 388 (474)
Q Consensus 384 f~~~~ 388 (474)
+..+.
T Consensus 215 i~~ig 219 (314)
T PRK06141 215 LDLVG 219 (314)
T ss_pred EEeeC
Confidence 66554
No 46
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.019 Score=55.99 Aligned_cols=44 Identities=20% Similarity=0.243 Sum_probs=38.9
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
++|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+.++++.+.
T Consensus 3 k~vlVtGasg--~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~ 48 (276)
T PRK06482 3 KTWFITGASS--GFGRGMTERLLARGDRVAATVRRPDALDDLKARYGD 48 (276)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccC
Confidence 5799999998 9999999999999999988 888888888776543
No 47
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.69 E-value=0.03 Score=53.11 Aligned_cols=44 Identities=14% Similarity=0.273 Sum_probs=38.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|.++|.+|++ |+.++.+.+.+++.
T Consensus 5 ~~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (251)
T PRK07231 5 GKVAIVTGASS--GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL 50 (251)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 35899999998 9999999999999999988 88888887777654
No 48
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.025 Score=54.36 Aligned_cols=44 Identities=18% Similarity=0.289 Sum_probs=38.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 6 ~k~~lItGas~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (254)
T PRK07478 6 GKVAIITGASS--GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR 51 (254)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 88888888877753
No 49
>PRK06046 alanine dehydrogenase; Validated
Probab=95.65 E-value=0.11 Score=53.59 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=88.4
Q ss_pred HcCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973 243 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 313 (474)
Q Consensus 243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig 313 (474)
..|+|+++.--=|..+.+..-.++.+.-.++ +.-..+.||+.+|+ |++.+-+ +++.+.|.++|+- ..|
T Consensus 65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~qa 141 (326)
T PRK06046 65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQA 141 (326)
T ss_pred eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 4688888864434333333323345555544 35589999999985 2333555 6688899999987 799
Q ss_pred HHHHHHHh-ccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc-CceeEEEEcC-----cCChhhhhcCCCCce
Q 011973 314 NAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGD-----DLTGKEQARAPKGTI 383 (474)
Q Consensus 314 ~ava~~L~-~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~~-~~~~vwivg~-----~i~~~eq~~a~~G~~ 383 (474)
++.++.|+ .++++... |++++.+++++++.+..+..+....+.++ ..+++++.-. .++.+ |.++|+|
T Consensus 142 ~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~aDiVv~aTps~~P~~~~~---~l~~g~h 218 (326)
T PRK06046 142 RTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAE---WIKEGTH 218 (326)
T ss_pred HHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhhCCEEEEecCCCCcEecHH---HcCCCCE
Confidence 99999998 44555544 89999999988875443333222334443 2277755211 12233 4589999
Q ss_pred eecccc
Q 011973 384 FIPYTQ 389 (474)
Q Consensus 384 f~~~~~ 389 (474)
+..+.-
T Consensus 219 V~~iGs 224 (326)
T PRK06046 219 INAIGA 224 (326)
T ss_pred EEecCC
Confidence 988763
No 50
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.017 Score=55.56 Aligned_cols=45 Identities=29% Similarity=0.320 Sum_probs=39.8
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++.
T Consensus 8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 54 (253)
T PRK05867 8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIG 54 (253)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence 457899999998 9999999999999999998 88888888877754
No 51
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.02 Score=54.92 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=37.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+.|+++|++| -||+++|+.|+++|.+|.+ |+++++++++++
T Consensus 2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATS--GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 5689999998 9999999999999999988 888888888765
No 52
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.58 E-value=0.14 Score=52.84 Aligned_cols=138 Identities=17% Similarity=0.085 Sum_probs=88.6
Q ss_pred cCCcEEEeccccccccccccCceeeecCCC-Ccceeee-cCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973 244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 313 (474)
Q Consensus 244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv-~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig 313 (474)
.|+|+++.--=|....+-.--++.+.-+|. +.-+.+. ||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G---~qA 140 (315)
T PRK06823 64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG---IQA 140 (315)
T ss_pred EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---HHH
Confidence 678887643333322232223344555555 3346675 9999975 3334444 6788999999987 899
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE----cCc-CChhhhhcCCCCc
Q 011973 314 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GDD-LTGKEQARAPKGT 382 (474)
Q Consensus 314 ~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----g~~-i~~~eq~~a~~G~ 382 (474)
+.-++++| +.-.+|.+ |++++.+.+++++.+. +..+.-+.+.+ + ++++|++- .+. ++.+ |.+||+
T Consensus 141 ~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~---~l~~G~ 216 (315)
T PRK06823 141 RMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL-GFAVNTTLDAAEVAHAANLIVTTTPSREPLLQAE---DIQPGT 216 (315)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc-CCcEEEECCHHHHhcCCCEEEEecCCCCceeCHH---HcCCCc
Confidence 99999999 66667777 9999999988776432 33322233444 3 78888771 122 3333 458999
Q ss_pred eeeccc
Q 011973 383 IFIPYT 388 (474)
Q Consensus 383 ~f~~~~ 388 (474)
++..+.
T Consensus 217 hi~~iG 222 (315)
T PRK06823 217 HITAVG 222 (315)
T ss_pred EEEecC
Confidence 999886
No 53
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.02 Score=55.70 Aligned_cols=44 Identities=25% Similarity=0.307 Sum_probs=39.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (261)
T PRK08265 6 GKVAIVTGGAT--LIGAAVARALVAAGARVAIVDIDADNGAAVAASLG 51 (261)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999998 88888888887764
No 54
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.031 Score=53.39 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=34.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR 341 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~ 341 (474)
+.|+++|++| -||+++|+.|+++|.+|++ |++ ++++++.++
T Consensus 2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~ 45 (251)
T PRK06924 2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISISRTENKELTKLAEQ 45 (251)
T ss_pred cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc
Confidence 4799999998 9999999999999999988 655 556655544
No 55
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.52 E-value=0.037 Score=56.58 Aligned_cols=90 Identities=18% Similarity=0.227 Sum_probs=61.6
Q ss_pred HHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 011973 286 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 286 taAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
|++.|++-+. -.-++|+|+|+.+ -+|+.+|..|.++|..|++ ++.. +|++. +
T Consensus 141 Tp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~~s~t~---~l~~~---------~------- 199 (286)
T PRK14175 141 TPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTILHSRSK---DMASY---------L------- 199 (286)
T ss_pred cHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCch---hHHHH---------H-------
Confidence 6666665543 3578999999996 7999999999999999999 2211 11110 0
Q ss_pred CceeEEE--EcCc--CChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973 359 HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 400 (474)
Q Consensus 359 ~~~~vwi--vg~~--i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~ 400 (474)
++++++| +|+- ++++. .++|++++|+. +++. ++--||-
T Consensus 200 ~~ADIVIsAvg~p~~i~~~~---vk~gavVIDvG-i~~~~~gkl~GDvd 244 (286)
T PRK14175 200 KDADVIVSAVGKPGLVTKDV---VKEGAVIIDVG-NTPDENGKLKGDVD 244 (286)
T ss_pred hhCCEEEECCCCCcccCHHH---cCCCcEEEEcC-CCcCCCCCeecCcc
Confidence 3555655 4443 77754 48999999999 7763 3445555
No 56
>PRK06194 hypothetical protein; Provisional
Probab=95.51 E-value=0.029 Score=54.92 Aligned_cols=43 Identities=14% Similarity=0.251 Sum_probs=37.4
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.|+|+|++| -||+++|+.|+++|.+|++ |+.++++++.+++.
T Consensus 7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (287)
T PRK06194 7 KVAVITGAAS--GFGLAFARIGAALGMKLVLADVQQDALDRAVAELR 51 (287)
T ss_pred CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 77777777776654
No 57
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.51 E-value=0.071 Score=58.99 Aligned_cols=123 Identities=17% Similarity=0.188 Sum_probs=81.7
Q ss_pred HHHHHHHcCCc--EEEeccccc------cccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcC------------
Q 011973 237 AILEADAKGVK--VISLGLLNQ------GEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK------------ 296 (474)
Q Consensus 237 Ai~~A~k~G~k--V~~LG~ln~------~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~------------ 296 (474)
-...+++.+++ +++...+++ .+.+|..| +.+..-|+ +.. +++ . +.-++.|.-
T Consensus 169 i~~~v~~~~~~~iiiAips~~~~~~~~i~~~l~~~~-~~v~~lP~-~~~-l~~----~-~~~lreI~ieDLLgR~pV~~d 240 (588)
T COG1086 169 IERVVEELGIQLILIAIPSASQEERRRILLRLARTG-IAVRILPQ-LTD-LKD----L-NGQLREIEIEDLLGRPPVALD 240 (588)
T ss_pred HHHHHHHcCCceEEEecCCCCHHHHHHHHHHHHhcC-CcEEecCc-HHH-HHH----h-ccccccCCHHHHhCCCCCCCC
Confidence 44467788888 777777777 45677777 57777777 441 111 1 111444421
Q ss_pred --------CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeecccccCcee-EE
Q 011973 297 --------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IW 364 (474)
Q Consensus 297 --------~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~-vw 364 (474)
..++|+|+||+| +||+.+|+-+++.+.+.++ +++-.+..+++++.+..+ + .+ .-
T Consensus 241 ~~~i~~~~~gK~vLVTGagG--SiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~-----------~~~~~ 306 (588)
T COG1086 241 TELIGAMLTGKTVLVTGGGG--SIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-E-----------LKLRF 306 (588)
T ss_pred HHHHHhHcCCCEEEEeCCCC--cHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-C-----------cceEE
Confidence 378999999999 9999999999987877766 777777777777655442 1 12 24
Q ss_pred EEcCcCChhhhhcCCCC
Q 011973 365 LVGDDLTGKEQARAPKG 381 (474)
Q Consensus 365 ivg~~i~~~eq~~a~~G 381 (474)
+.||.-|.+-...+-.|
T Consensus 307 ~igdVrD~~~~~~~~~~ 323 (588)
T COG1086 307 YIGDVRDRDRVERAMEG 323 (588)
T ss_pred EecccccHHHHHHHHhc
Confidence 56777777666555444
No 58
>PRK08643 acetoin reductase; Validated
Probab=95.50 E-value=0.03 Score=53.71 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=37.8
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.++++|++| -||+++|++|+++|.+|.+ |+.++.+++++++.
T Consensus 3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 47 (256)
T PRK08643 3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS 47 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888877754
No 59
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.48 E-value=0.044 Score=55.38 Aligned_cols=127 Identities=13% Similarity=0.054 Sum_probs=77.5
Q ss_pred ecCChhHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeee-
Q 011973 280 VDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLS- 353 (474)
Q Consensus 280 v~GnsltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~- 353 (474)
|||.-...+.--..+ +...++|+|+||- -.|+|++.+|.+.|+ ++++ |+.+|.++|.+++........+..
T Consensus 105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~ 181 (282)
T TIGR01809 105 TDWDGIAGALANIGKFEPLAGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGD 181 (282)
T ss_pred CCHHHHHHHHHhhCCccccCCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccch
Confidence 667766666543332 2245689999996 589999999999997 5777 999999999888643321110111
Q ss_pred ccc-cc-CceeEEE----EcCcCChhhhhc---------CCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973 354 TSY-AA-HKTKIWL----VGDDLTGKEQAR---------APKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 409 (474)
Q Consensus 354 t~~-~~-~~~~vwi----vg~~i~~~eq~~---------a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v 409 (474)
... +. ..++++| +|..++++++.. .+++..+.|..=-|.+ ..| +-|....+..|-+
T Consensus 182 ~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv 258 (282)
T TIGR01809 182 SGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPTPLVAIVSAAGWRVISGLQMLL 258 (282)
T ss_pred hhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCCHHHHHHHHCCCEEECcHHHHH
Confidence 111 12 4567777 676666655421 2456677777732222 112 4466666666654
No 60
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.46 E-value=0.041 Score=51.99 Aligned_cols=88 Identities=20% Similarity=0.296 Sum_probs=60.9
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec--CcC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG--DDL 370 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg--~~i 370 (474)
.-++|+|+|-- ++|+.||+.|...|.+|++...|....||.-. .+.+ +.+.+ + .+++++| -| +.|
T Consensus 22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~-----v~~~~~a~~~adi~vtaTG~~~vi 92 (162)
T PF00670_consen 22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFE-----VMTLEEALRDADIFVTATGNKDVI 92 (162)
T ss_dssp TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-E-----EE-HHHHTTT-SEEEE-SSSSSSB
T ss_pred CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcE-----ecCHHHHHhhCCEEEECCCCcccc
Confidence 56789999987 99999999999999999996667777776653 3331 22343 3 6667766 44 568
Q ss_pred ChhhhhcCCCCceeecccccCcc
Q 011973 371 TGKEQARAPKGTIFIPYTQIPPR 393 (474)
Q Consensus 371 ~~~eq~~a~~G~~f~~~~~v~p~ 393 (474)
+.++...+|.|++++....++-+
T Consensus 93 ~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 93 TGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp -HHHHHHS-TTEEEEESSSSTTS
T ss_pred CHHHHHHhcCCeEEeccCcCcee
Confidence 99999999999999998876655
No 61
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.04 Score=52.54 Aligned_cols=44 Identities=20% Similarity=0.330 Sum_probs=38.5
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++..
T Consensus 3 k~vlItGas~--giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 48 (248)
T PRK08251 3 QKILITGASS--GLGAGMAREFAAKGRDLALCARRTDRLEELKAELLA 48 (248)
T ss_pred CEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 5799999998 9999999999999999988 888888888776543
No 62
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.45 E-value=0.023 Score=54.68 Aligned_cols=45 Identities=20% Similarity=0.213 Sum_probs=38.9
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..++|+++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 9 ~~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~ 55 (255)
T PRK07523 9 TGRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK 55 (255)
T ss_pred CCCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 457899999998 9999999999999999998 88888877766654
No 63
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.031 Score=57.20 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=39.7
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 7 ~~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~ 53 (334)
T PRK07109 7 GRQVVVITGASA--GVGRATARAFARRGAKVVLLARGEEGLEALAAEIR 53 (334)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 356899999998 9999999999999999988 88999988887754
No 64
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.43 E-value=0.043 Score=58.47 Aligned_cols=151 Identities=19% Similarity=0.203 Sum_probs=91.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE-----
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----- 366 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv----- 366 (474)
..++|+++|+ | .+|+.++++|.+.| .+|++ |+.++.+.+.++++... +...+.. . ..++++|.
T Consensus 179 ~~~~VlViGa-G--~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~----i~~~~l~~~l~~aDvVi~aT~s~ 251 (417)
T TIGR01035 179 KGKKALLIGA-G--EMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA----VKFEDLEEYLAEADIVISSTGAP 251 (417)
T ss_pred cCCEEEEECC-h--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE----eeHHHHHHHHhhCCEEEECCCCC
Confidence 4578999998 7 99999999999989 56777 88888888888765421 2112232 2 56677662
Q ss_pred cCcCChhhhhcCC----CCceeecccccCcc---CC--CCCeeeecCCccccCCCCccccccccccCcchhHHHHHhhhh
Q 011973 367 GDDLTGKEQARAP----KGTIFIPYTQIPPR---KL--RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGII 437 (474)
Q Consensus 367 g~~i~~~eq~~a~----~G~~f~~~~~v~p~---~~--R~dc~y~~~~am~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v 437 (474)
.-.+++++...+. .+.+++|.+ +|+. +. -+++.+.. -++++.+ ++-.+..|.-.+=.|+.||
T Consensus 252 ~~ii~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~~------vDdl~~~--~~~n~~~r~~~~~~a~~ii 322 (417)
T TIGR01035 252 HPIVSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLYD------VDDLQPV--VEENLAERREEAEKAEEIV 322 (417)
T ss_pred CceEcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEEE------HHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence 2235666665542 356889998 6554 11 12222111 1122211 2334555665666788887
Q ss_pred h----hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 011973 438 H----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL 463 (474)
Q Consensus 438 ~----alEgw~~~-e~G~-i--v-~~id~iw~aa~ 463 (474)
- +|+.|... ..-. | + +++++|-+.-+
T Consensus 323 ~~~~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el 357 (417)
T TIGR01035 323 EEETAEFKQWLRSLEVEPTIKALRSLAEIVREKEL 357 (417)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 6 77777655 5555 4 3 66666654443
No 65
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.41 E-value=0.012 Score=54.24 Aligned_cols=102 Identities=24% Similarity=0.289 Sum_probs=66.1
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--E------
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V------ 366 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--v------ 366 (474)
++|-++|- | ..|+++|+.|.+.|..|.. |++++.++++++- .....+.++ +.+++++ +
T Consensus 2 ~~Ig~IGl-G--~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-------~~~~~s~~e~~~~~dvvi~~v~~~~~v 71 (163)
T PF03446_consen 2 MKIGFIGL-G--NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-------AEVADSPAEAAEQADVVILCVPDDDAV 71 (163)
T ss_dssp BEEEEE---S--HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-------EEEESSHHHHHHHBSEEEE-SSSHHHH
T ss_pred CEEEEEch-H--HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-------hhhhhhhhhHhhcccceEeecccchhh
Confidence 47889998 5 9999999999999999999 8899999998772 111224432 5555544 2
Q ss_pred cCcCChhh-hhcCCCCceeecccccCcc-------CCC-CCeeeecCCccccC
Q 011973 367 GDDLTGKE-QARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIP 410 (474)
Q Consensus 367 g~~i~~~e-q~~a~~G~~f~~~~~v~p~-------~~R-~dc~y~~~~am~vP 410 (474)
.+.+..++ ...+++|++|++.+-.+|+ .++ +.+.|.+.|.+--|
T Consensus 72 ~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~ 124 (163)
T PF03446_consen 72 EAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGP 124 (163)
T ss_dssp HHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHH
T ss_pred hhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeeccc
Confidence 22222211 2346899999999998887 222 67889988876543
No 66
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.40 E-value=0.079 Score=55.68 Aligned_cols=92 Identities=15% Similarity=0.179 Sum_probs=65.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE-----cC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV-----GD 368 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv-----g~ 368 (474)
.++|+|+|+ | .+|+.+|+.|.+.|.+|.+ ++.++.+.++++..........+...+. . +.++++|- |+
T Consensus 167 ~~~VlViGa-G--~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 167 PGDVTIIGG-G--VVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CceEEEEcC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 456999999 6 8999999999999999888 7888888887765432100000011222 2 56677663 32
Q ss_pred ----cCChhhhhcCCCCceeecccccCcc
Q 011973 369 ----DLTGKEQARAPKGTIFIPYTQIPPR 393 (474)
Q Consensus 369 ----~i~~~eq~~a~~G~~f~~~~~v~p~ 393 (474)
.++.+..+.+++|.+++|++ +++-
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva-~d~G 271 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVA-IDQG 271 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEe-cCCC
Confidence 26888999999999999999 7776
No 67
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.048 Score=52.13 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=35.3
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+.|+|+|++| -||+++++.|+++|.+|.. |+.++.+++++.
T Consensus 3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 45 (257)
T PRK09291 3 KTILITGAGS--GFGREVALRLARKGHNVIAGVQIAPQVTALRAE 45 (257)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4799999999 9999999999999999988 777777666654
No 68
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.022 Score=54.94 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=39.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++..
T Consensus 7 ~k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~ 53 (260)
T PRK07063 7 GKVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAAIAR 53 (260)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46799999998 9999999999999999988 888889888877643
No 69
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.026 Score=54.97 Aligned_cols=44 Identities=18% Similarity=0.215 Sum_probs=38.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 5 ~~~ilVtGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (273)
T PRK07825 5 GKVVAITGGAR--GIGLATARALAALGARVAIGDLDEALAKETAAELG 50 (273)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 35799999998 9999999999999999988 88888888877654
No 70
>PRK07589 ornithine cyclodeaminase; Validated
Probab=95.34 E-value=0.13 Score=53.90 Aligned_cols=139 Identities=15% Similarity=0.011 Sum_probs=90.6
Q ss_pred HcCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhH
Q 011973 243 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 313 (474)
Q Consensus 243 k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig 313 (474)
-.|+|+++.=-=|....+-.--++.+.-+|+ +.-+-+.||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 65 ~~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGaG---~QA 141 (346)
T PRK07589 65 LYSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGNG---AQS 141 (346)
T ss_pred ceEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HHH
Confidence 3678887643334333333333334444544 34589999999984 3344555 6788899999987 799
Q ss_pred HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcC-------cCChhhhhcCCC
Q 011973 314 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGD-------DLTGKEQARAPK 380 (474)
Q Consensus 314 ~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~-------~i~~~eq~~a~~ 380 (474)
+.-++++| +.-.+|.+ |++++.+.+.+++... +..+.-+.+.+ + ++++|++-=. .++. +|.++
T Consensus 142 ~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~---~~lkp 217 (346)
T PRK07589 142 EFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP-GLRIVACRSVAEAVEGADIITTVTADKTNATILTD---DMVEP 217 (346)
T ss_pred HHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhcCCEEEEecCCCCCCceecH---HHcCC
Confidence 99988888 66666666 9999999999887642 23322233444 3 7888877311 1333 35699
Q ss_pred Cceeeccc
Q 011973 381 GTIFIPYT 388 (474)
Q Consensus 381 G~~f~~~~ 388 (474)
|+|+.-+-
T Consensus 218 G~hV~aIG 225 (346)
T PRK07589 218 GMHINAVG 225 (346)
T ss_pred CcEEEecC
Confidence 99988764
No 71
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.031 Score=53.96 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=39.2
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.+++++++++++.
T Consensus 3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 48 (257)
T PRK07024 3 LKVFITGASS--GIGQALAREYARQGATLGLVARRTDALQAFAARLPK 48 (257)
T ss_pred CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc
Confidence 5799999998 9999999999999999998 888888888887654
No 72
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.025 Score=54.16 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 5 ~k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (258)
T PRK07890 5 GKVVVVSGVGP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEID 50 (258)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 36799999998 9999999999999999998 88888888877754
No 73
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.024 Score=57.19 Aligned_cols=44 Identities=16% Similarity=0.150 Sum_probs=38.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.++|+|+++ -||+++|+.|+++|.+|.+ |+.++.++..+++.
T Consensus 14 gk~~lITGas~--GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~ 59 (313)
T PRK05854 14 GKRAVVTGASD--GLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIR 59 (313)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999998 89888887776654
No 74
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.03 Score=54.00 Aligned_cols=43 Identities=16% Similarity=0.299 Sum_probs=39.1
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.+++++++++++
T Consensus 2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 46 (260)
T PRK08267 2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYDINEAGLAALAAELG 46 (260)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999998 88999998888765
No 75
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.25 E-value=0.025 Score=53.77 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=37.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 45 (255)
T TIGR01963 2 KTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA 45 (255)
T ss_pred CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4699999998 9999999999999999988 8888888777664
No 76
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.22 E-value=0.04 Score=55.15 Aligned_cols=38 Identities=21% Similarity=0.136 Sum_probs=32.1
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 338 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l 338 (474)
+.|+|+|++| -||+++++.|.++|.+|.. |+.++.+.+
T Consensus 6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (322)
T PLN02986 6 KLVCVTGASG--YIASWIVKLLLLRGYTVKATVRDLTDRKKT 45 (322)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence 6899999999 9999999999999999975 766554443
No 77
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.20 E-value=0.042 Score=52.43 Aligned_cols=43 Identities=19% Similarity=0.304 Sum_probs=36.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
++|+++|++| -||+++++.|+++|.+|++ |+.++.+++.+++.
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~ 45 (254)
T TIGR02415 1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVADLNEETAKETAKEIN 45 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 4689999998 9999999999999999988 77777777766643
No 78
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.035 Score=52.75 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=38.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++++
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK06500 6 GKTALITGGTS--GIGLETARQFLAEGARVAITGRDPASLEAARAELG 51 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence 35799999998 9999999999999999988 88888888877764
No 79
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.045 Score=52.13 Aligned_cols=44 Identities=20% Similarity=0.317 Sum_probs=37.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+++..+++++++.
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~ 51 (250)
T PRK07774 6 DKVAIVTGAAG--GIGQAYAEALAREGASVVVADINAEGAERVAKQIV 51 (250)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 77777777766643
No 80
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.16 E-value=0.034 Score=53.54 Aligned_cols=44 Identities=25% Similarity=0.258 Sum_probs=39.1
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (257)
T PRK07067 6 GKVALLTGAAS--GIGEAVAERYLAEGARVVIADIKPARARLAALEIG 51 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence 46799999998 9999999999999999988 88888888877764
No 81
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.03 Score=52.83 Aligned_cols=45 Identities=22% Similarity=0.240 Sum_probs=39.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+.|+++|++| .||+++|+.|.++|.+|.+ |+.++.+++.+++..
T Consensus 6 ~~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~ 52 (237)
T PRK07326 6 GKVALITGGSK--GIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN 52 (237)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc
Confidence 36799999998 9999999999999999988 888888888777543
No 82
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.14 E-value=0.029 Score=54.22 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=38.1
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
+|+++|+++ -||+++|+.|+++|.+|.+ |++++++++.+++..
T Consensus 2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 46 (259)
T PRK08340 2 NVLVTASSR--GIGFNVARELLKKGARVVISSRNEENLEKALKELKE 46 (259)
T ss_pred eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 689999998 9999999999999999998 888888888777643
No 83
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.14 E-value=0.045 Score=51.80 Aligned_cols=44 Identities=25% Similarity=0.354 Sum_probs=37.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 6 ~~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~ 51 (251)
T PRK12826 6 GRVALVTGAAR--GIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE 51 (251)
T ss_pred CCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999998 9999999999999999988 88777776666543
No 84
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.13 E-value=0.12 Score=52.70 Aligned_cols=122 Identities=11% Similarity=0.115 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEeccccccccccccCceeeecCCCCcceeeecCChhHHHHHHh--cCcCCCcEEEEeccCC
Q 011973 231 NSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN--SLPKTTAHVLLRGTVT 308 (474)
Q Consensus 231 n~~Ie~Ai~~A~k~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~--~ip~~~~~V~l~Gatg 308 (474)
.+.+.+++..|.. .|++|. +| +|.++..+. +-..=|+ ....-.++ .++-.-++|+|+|+.|
T Consensus 107 ~~~~ld~I~~aKD-------Vdg~n~---~n-~G~l~~~~~---~~~p~T~---~gii~~L~~~~i~l~Gk~vvViG~gg 169 (283)
T PRK14192 107 ERACFDAISLAKD-------VDGVTC---LG-FGRMAMGEA---AYGSATP---AGIMRLLKAYNIELAGKHAVVVGRSA 169 (283)
T ss_pred HHHHHhccCHHHh-------cCCCCc---cc-cCccccCCC---cccCCcH---HHHHHHHHHcCCCCCCCEEEEECCcH
Confidence 3446666744444 356777 55 566554332 2222233 22222222 3455677999999997
Q ss_pred CchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccccCceeEEEEc----CcCChhhhhcCCCCcee
Q 011973 309 ANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVG----DDLTGKEQARAPKGTIF 384 (474)
Q Consensus 309 ~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwivg----~~i~~~eq~~a~~G~~f 384 (474)
-+|+++|..|.++|..|++-+. +-++|++.+ ++++++|.. +.++++. .++|+++
T Consensus 170 --~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~----------------~~aDIvI~AtG~~~~v~~~~---lk~gavV 227 (283)
T PRK14192 170 --ILGKPMAMMLLNANATVTICHS-RTQNLPELV----------------KQADIIVGAVGKPELIKKDW---IKQGAVV 227 (283)
T ss_pred --HHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh----------------ccCCEEEEccCCCCcCCHHH---cCCCCEE
Confidence 8999999999999999998111 222333322 244555522 2455544 4999999
Q ss_pred ecccccCc
Q 011973 385 IPYTQIPP 392 (474)
Q Consensus 385 ~~~~~v~p 392 (474)
+|+. +.|
T Consensus 228 iDvg-~n~ 234 (283)
T PRK14192 228 VDAG-FHP 234 (283)
T ss_pred EEEE-Eee
Confidence 9998 555
No 85
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.12 E-value=0.05 Score=52.80 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=41.1
Q ss_pred cCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 293 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 293 ~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+...+.++++|+++ -||+++|+.|+++|.+|.+ |+.++++++.+++.
T Consensus 5 ~~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~ 55 (265)
T PRK07097 5 LFSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR 55 (265)
T ss_pred ccCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence 3445567899999998 9999999999999999988 88888887776653
No 86
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.11 E-value=0.033 Score=53.48 Aligned_cols=45 Identities=16% Similarity=0.316 Sum_probs=39.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+.++|+|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~ 54 (254)
T PRK08085 8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIINDITAERAELAVAKLR 54 (254)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999999 88888887776654
No 87
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.10 E-value=0.046 Score=52.44 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=35.8
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 339 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~ 339 (474)
.|+|+|||| .||+++|+.|.++|.+|.. |+.++...+.
T Consensus 2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATG--FVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEeccc--chHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 689999999 9999999999999999999 9999998887
No 88
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.09 E-value=0.036 Score=58.62 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=75.0
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCccccccceeeecccc-c--CceeEEE--EcC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A--HKTKIWL--VGD 368 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~--~~~~vwi--vg~ 368 (474)
...+|+++|||| -+|+.+.+.|.++ +.+++. ++++.-+.+...-+.-.+..+....+.+ + +++|+++ ++.
T Consensus 37 ~~~kVaIvGATG--~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 37 EKKRIFVLGASG--YTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred cccEEEEECCCC--hHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 456999999999 9999999999955 888777 3322222222211111111111122222 2 5677766 455
Q ss_pred cCChhhhhcCCCCceeecccccCcc-CCCCCeeeecC--CccccCCCCccccccccccC---------cc-hhHH-HHHh
Q 011973 369 DLTGKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHST--PAMIIPPSLSNMHSCENWLG---------RR-VMSA-WRIA 434 (474)
Q Consensus 369 ~i~~~eq~~a~~G~~f~~~~~v~p~-~~R~dc~y~~~--~am~vP~~~~~~~~~e~~~p---------rr-~~~A-c~a~ 434 (474)
..+.+--..+.+|..+||.|- . .+++|..|.+- -....|+-.+. +-+++| ++ +.-+ |.+-
T Consensus 115 ~~s~~i~~~~~~g~~VIDlSs---~fRl~~~~~y~~~y~~p~~~pe~~~~---~~yglpE~~r~~i~~~~iIAnPgC~~t 188 (381)
T PLN02968 115 GTTQEIIKALPKDLKIVDLSA---DFRLRDIAEYEEWYGHPHRAPELQKE---AVYGLTELQREEIKSARLVANPGCYPT 188 (381)
T ss_pred HHHHHHHHHHhCCCEEEEcCc---hhccCCcccchhccCCCCCCcccchh---hhcccchhCHHHhcCCCEEECCCCHHH
Confidence 444444444567988888872 2 34455665554 22233432221 124443 12 2222 9999
Q ss_pred hhhhhhcC
Q 011973 435 GIIHALEG 442 (474)
Q Consensus 435 ~~v~alEg 442 (474)
+++++|--
T Consensus 189 ~~~laL~P 196 (381)
T PLN02968 189 GIQLPLVP 196 (381)
T ss_pred HHHHHHHH
Confidence 99987743
No 89
>PRK05993 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.035 Score=54.58 Aligned_cols=41 Identities=20% Similarity=0.271 Sum_probs=36.9
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++.+++.
T Consensus 5 k~vlItGasg--giG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~ 47 (277)
T PRK05993 5 RSILITGCSS--GIGAYCARALQSDGWRVFATCRKEEDVAALEAE 47 (277)
T ss_pred CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence 5799999998 9999999999999999998 888888888754
No 90
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.07 E-value=0.051 Score=51.00 Aligned_cols=42 Identities=24% Similarity=0.313 Sum_probs=36.3
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
+.|+++|++| .||+.+|+.|.++|.+|.+ |++++.+.+..++
T Consensus 6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 49 (246)
T PRK05653 6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDSNEEAAEALAAEL 49 (246)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Confidence 5799999998 9999999999999999888 8888777666553
No 91
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=95.06 E-value=0.027 Score=57.76 Aligned_cols=78 Identities=15% Similarity=0.189 Sum_probs=49.1
Q ss_pred EEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccccCce-eEEEEcCcCChhhhh
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKT-KIWLVGDDLTGKEQA 376 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~-~vwivg~~i~~~eq~ 376 (474)
|+|+||+| +||+.+|+.|++.+. ++.+ +++..+..+++++.......-+ .. .+-++||.-+.+...
T Consensus 1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v--------~~~~~~vigDvrd~~~l~ 70 (293)
T PF02719_consen 1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKV--------RFEIVPVIGDVRDKERLN 70 (293)
T ss_dssp EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTC--------EEEEE--CTSCCHHHHHH
T ss_pred CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCc--------ccccCceeecccCHHHHH
Confidence 78999999 999999999998886 4555 8888999999997543321101 11 235678887777654
Q ss_pred cC----CCCceeeccc
Q 011973 377 RA----PKGTIFIPYT 388 (474)
Q Consensus 377 ~a----~~G~~f~~~~ 388 (474)
.+ .+-.+||--+
T Consensus 71 ~~~~~~~pdiVfHaAA 86 (293)
T PF02719_consen 71 RIFEEYKPDIVFHAAA 86 (293)
T ss_dssp HHTT--T-SEEEE---
T ss_pred HHHhhcCCCEEEEChh
Confidence 44 4555555444
No 92
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.035 Score=53.08 Aligned_cols=41 Identities=27% Similarity=0.348 Sum_probs=37.0
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
+|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL 44 (223)
T ss_pred eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 589999998 9999999999999999988 8888888887765
No 93
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.035 Score=55.31 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=41.3
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.++++.
T Consensus 8 ~gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~ 55 (296)
T PRK05872 8 AGKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAELGG 55 (296)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC
Confidence 356899999998 9999999999999999988 899999999888764
No 94
>PRK06199 ornithine cyclodeaminase; Validated
Probab=95.05 E-value=0.18 Score=53.40 Aligned_cols=155 Identities=13% Similarity=0.108 Sum_probs=100.7
Q ss_pred cCCcEEEeccccccccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCchhHH
Q 011973 244 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 314 (474)
Q Consensus 244 ~G~kV~~LG~ln~~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~kig~ 314 (474)
.|+|+++.=-=|....+..-.++.+.-+|+ +.-.-+.||+.+|+ |+..+-+ +++.+.+.++|+- -.|+
T Consensus 92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~QA~ 168 (379)
T PRK06199 92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VMGK 168 (379)
T ss_pred eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HHHH
Confidence 678888754334433444455556655655 34589999999985 4445656 6788999999987 7999
Q ss_pred HHHHHHhc--c-CcEEEe--cchhhHHHHHhhCccccc-c-ceeeecccc-c-CceeEEEEcC-----------cCChhh
Q 011973 315 AVASSLCQ--M-GIKVAT--ICKDDYEKLKLRIPVEAQ-H-NLVLSTSYA-A-HKTKIWLVGD-----------DLTGKE 374 (474)
Q Consensus 315 ava~~L~~--~-~v~v~l--~~~~~~~~l~~~~~~~~~-~-~l~~~t~~~-~-~~~~vwivg~-----------~i~~~e 374 (474)
.-+++++. . -.+|.+ |++++.+.+.+++..... . .+.-+.+.+ + ++++|++.=. .++.+
T Consensus 169 ~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~~~- 247 (379)
T PRK06199 169 TILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVKRE- 247 (379)
T ss_pred HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEecHH-
Confidence 99999983 3 346666 999999999988765432 1 222233554 4 8888877322 23333
Q ss_pred hhcCCCCceeecccc--cCccCCCCC-eeeecC
Q 011973 375 QARAPKGTIFIPYTQ--IPPRKLRKD-CFYHST 404 (474)
Q Consensus 375 q~~a~~G~~f~~~~~--v~p~~~R~d-c~y~~~ 404 (474)
|.++|+|+.-... +|+.-++.| ..|-+.
T Consensus 248 --~lkpG~hv~~ig~~eld~~~l~~~a~vvvD~ 278 (379)
T PRK06199 248 --WVKPGAFLLMPAACRIDEGMEQGDVRKVVDN 278 (379)
T ss_pred --HcCCCcEEecCCcccCCHHHHhCCCcEEEcC
Confidence 5589999875432 555555553 444444
No 95
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.05 E-value=0.038 Score=53.46 Aligned_cols=45 Identities=18% Similarity=0.251 Sum_probs=39.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |++++++++.++++.
T Consensus 6 ~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 52 (263)
T PRK06200 6 GQVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQRFGD 52 (263)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 35799999997 9999999999999999988 888999988877643
No 96
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.04 E-value=0.039 Score=53.45 Aligned_cols=43 Identities=19% Similarity=0.281 Sum_probs=38.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+++++++++++.
T Consensus 5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~ 49 (262)
T TIGR03325 5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH 49 (262)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc
Confidence 47899999998 9999999999999999998 8888888887654
No 97
>PRK08017 oxidoreductase; Provisional
Probab=95.02 E-value=0.037 Score=52.86 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=35.2
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++++.+++
T Consensus 3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 44 (256)
T PRK08017 3 KSVLITGCSS--GIGLEAALELKRRGYRVLAACRKPDDVARMNS 44 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence 5799999998 9999999999999999988 88888777654
No 98
>PRK07831 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.057 Score=52.21 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=37.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| +-||+++|+.|+++|.+|.+ |+.++++...+++.
T Consensus 17 ~k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~ 63 (262)
T PRK07831 17 GKVVLVTAAAG-TGIGSATARRALEEGARVVISDIHERRLGETADELA 63 (262)
T ss_pred CCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999986 35999999999999999998 77777777666543
No 99
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.98 E-value=0.078 Score=54.03 Aligned_cols=49 Identities=14% Similarity=0.064 Sum_probs=38.2
Q ss_pred hcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 292 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 292 ~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
++......+|+|+|++| -||+.+++.|.++|.+|.. |+.++.+.+.+++
T Consensus 4 ~~~~~~~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~ 54 (353)
T PLN02896 4 EGRESATGTYCVTGATG--YIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKW 54 (353)
T ss_pred cccccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhh
Confidence 34444567899999999 9999999999999999987 6666555554443
No 100
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.053 Score=54.07 Aligned_cols=44 Identities=20% Similarity=0.201 Sum_probs=36.7
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
..+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.++..+++
T Consensus 15 ~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l 60 (306)
T PRK06197 15 SGRVAVVTGANT--GLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI 60 (306)
T ss_pred CCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 457899999998 9999999999999999877 8877766655443
No 101
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.034 Score=53.72 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=39.7
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
..+.++++|+++ -||+++|+.|.++|.+|.+ |+.++++++.+++..
T Consensus 7 ~~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (265)
T PRK07062 7 EGRVAVVTGGSS--GIGLATVELLLEAGASVAICGRDEERLASAEARLRE 54 (265)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh
Confidence 356899999998 9999999999999999988 888888887776543
No 102
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.96 E-value=0.095 Score=48.16 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=52.0
Q ss_pred cCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec
Q 011973 293 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG 367 (474)
Q Consensus 293 ~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg 367 (474)
+++-..++|.++|.+. .+|+.+|..|.++|..|++ .++. .+.+ . +.+||+| +|
T Consensus 23 ~~~~~gk~v~VvGrs~--~vG~pla~lL~~~gatV~~~~~~t--------------------~~l~~~v~~ADIVvsAtg 80 (140)
T cd05212 23 GVRLDGKKVLVVGRSG--IVGAPLQCLLQRDGATVYSCDWKT--------------------IQLQSKVHDADVVVVGSP 80 (140)
T ss_pred CCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeCCCC--------------------cCHHHHHhhCCEEEEecC
Confidence 4455788999999998 9999999999999999998 2111 0112 1 4556655 33
Q ss_pred --CcCChhhhhcCCCCceeecccccCc
Q 011973 368 --DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 368 --~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
..++++. .++|++++|+. .+.
T Consensus 81 ~~~~i~~~~---ikpGa~Vidvg-~~~ 103 (140)
T cd05212 81 KPEKVPTEW---IKPGATVINCS-PTK 103 (140)
T ss_pred CCCccCHHH---cCCCCEEEEcC-CCc
Confidence 3355554 49999999987 443
No 103
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.041 Score=52.68 Aligned_cols=45 Identities=20% Similarity=0.420 Sum_probs=39.0
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..++|+++|++| .||+++|+.|+++|.+|++ |++++.+.++++.+
T Consensus 10 ~~~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~ 56 (264)
T PRK12829 10 DGLRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP 56 (264)
T ss_pred CCCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 347899999998 9999999999999999988 88888888777654
No 104
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=94.93 E-value=0.072 Score=55.29 Aligned_cols=151 Identities=18% Similarity=0.197 Sum_probs=106.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-CceeEEE----EcCcCC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL----VGDDLT 371 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi----vg~~i~ 371 (474)
-+.++|+|-- ++|.-||.+|--.|-+|.+..-|..-.||... ++. ++++.+ + +..+|.| --|+|.
T Consensus 214 GKv~Vv~GYG---dVGKgCaqaLkg~g~~VivTEiDPI~ALQAaM-eG~-----~V~tm~ea~~e~difVTtTGc~dii~ 284 (434)
T KOG1370|consen 214 GKVAVVCGYG---DVGKGCAQALKGFGARVIVTEIDPICALQAAM-EGY-----EVTTLEEAIREVDIFVTTTGCKDIIT 284 (434)
T ss_pred ccEEEEeccC---ccchhHHHHHhhcCcEEEEeccCchHHHHHHh-hcc-----EeeeHHHhhhcCCEEEEccCCcchhh
Confidence 4456666654 99999999999999999997777888887763 222 345564 3 6777777 347889
Q ss_pred hhhhhcCCCCceeecccccCcc----CCCCC-------------eeeecCCcccc--CCCCccccccccccCcchhHHHH
Q 011973 372 GKEQARAPKGTIFIPYTQIPPR----KLRKD-------------CFYHSTPAMII--PPSLSNMHSCENWLGRRVMSAWR 432 (474)
Q Consensus 372 ~~eq~~a~~G~~f~~~~~v~p~----~~R~d-------------c~y~~~~am~v--P~~~~~~~~~e~~~prr~~~Ac~ 432 (474)
.+...+||.++++|-.-.|+-+ -+|.+ ...+++-.+.+ -+-+-|+. |-.+.|.=+||-.+
T Consensus 285 ~~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~-CatghpSFvmS~sf 363 (434)
T KOG1370|consen 285 GEHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLG-CATGHPSFVMSNSF 363 (434)
T ss_pred HHHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecc-cccCCCceEEecch
Confidence 9999999999999988775544 22211 11222222221 12366787 99999999999999
Q ss_pred HhhhhhhhcCCCCCc----cch-h-hhhHHHH
Q 011973 433 IAGIIHALEGWDLNE----CGQ-T-MCDIHQV 458 (474)
Q Consensus 433 a~~~v~alEgw~~~e----~G~-i-v~~id~i 458 (474)
.--++.-+|=|++.+ .|- + ..++|+-
T Consensus 364 tnQvlAqIeLwt~p~~kY~~~V~~LPKklDE~ 395 (434)
T KOG1370|consen 364 TNQVLAQIELWTAPEGKYKVGVYVLPKKLDEY 395 (434)
T ss_pred HHHHHHHHHHhcCCCCccccceEecchhhHHH
Confidence 999999999999885 343 3 4788764
No 105
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.93 E-value=0.041 Score=52.82 Aligned_cols=46 Identities=15% Similarity=0.149 Sum_probs=39.5
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
...+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++.+.+++.
T Consensus 9 ~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 56 (256)
T PRK06124 9 LAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR 56 (256)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 3567899999998 9999999999999999999 88888887776653
No 106
>PRK05866 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.035 Score=55.51 Aligned_cols=44 Identities=23% Similarity=0.339 Sum_probs=39.1
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++.
T Consensus 40 ~k~vlItGasg--gIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~ 85 (293)
T PRK05866 40 GKRILLTGASS--GIGEAAAEQFARRGATVVAVARREDLLDAVADRIT 85 (293)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 88898888877753
No 107
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.92 E-value=0.034 Score=57.40 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=45.0
Q ss_pred HHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 290 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 290 vl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
+.+.++-....++|+|+|+ -||+++|+.|+++|.+|.| |+.++-++.++++..
T Consensus 27 ~~~~~~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~ 81 (314)
T KOG1208|consen 27 VTHGIDLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQK 81 (314)
T ss_pred eeccccCCCcEEEEECCCC--chHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3444554557899999996 9999999999999999999 999999988888665
No 108
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=94.91 E-value=0.058 Score=51.42 Aligned_cols=42 Identities=19% Similarity=0.133 Sum_probs=35.2
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 3 k~ilItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 47 (248)
T PRK06947 3 KVVLITGASR--GIGRATAVLAAARGWSVGINYARDAAAAEETADAV 47 (248)
T ss_pred cEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 5799999998 9999999999999999876 5667777666554
No 109
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.059 Score=51.43 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=36.3
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
++|+++|++| -||+++|+.|+++|.+|++ |++++.+.+.+++
T Consensus 2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (243)
T PRK07102 2 KKILIIGATS--DIARACARRYAAAGARLYLAARDVERLERLADDL 45 (243)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 4799999998 9999999999999999988 8888777666553
No 110
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.88 E-value=0.061 Score=52.17 Aligned_cols=44 Identities=14% Similarity=0.290 Sum_probs=36.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~ 343 (474)
.+.|+++|+++ -||+++|+.|+++|.+|.+ +++++.+.+.+++.
T Consensus 8 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 54 (260)
T PRK08416 8 GKTLVISGGTR--GIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLE 54 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999987 46677777766543
No 111
>PRK06139 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.037 Score=56.81 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=39.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 7 ~k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~ 52 (330)
T PRK06139 7 GAVVVITGASS--GIGQATAEAFARRGARLVLAARDEEALQAVAEECR 52 (330)
T ss_pred CCEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 99999998887754
No 112
>PRK06180 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.046 Score=53.62 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=38.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+.+++..
T Consensus 4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~ 48 (277)
T PRK06180 4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTVRSEAARADFEALH 48 (277)
T ss_pred CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc
Confidence 35799999998 9999999999999999998 8888888887653
No 113
>PLN02253 xanthoxin dehydrogenase
Probab=94.83 E-value=0.065 Score=52.34 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=38.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++..
T Consensus 18 ~k~~lItGas~--gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 64 (280)
T PLN02253 18 GKVALVTGGAT--GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG 64 (280)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Confidence 46899999998 9999999999999999988 777777777777644
No 114
>PRK05717 oxidoreductase; Validated
Probab=94.81 E-value=0.058 Score=51.93 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=38.0
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 9 ~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 55 (255)
T PRK05717 9 NGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG 55 (255)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC
Confidence 457899999998 9999999999999999988 77777777666553
No 115
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.068 Score=51.14 Aligned_cols=43 Identities=23% Similarity=0.223 Sum_probs=36.1
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 6 ~~~ilItGasg--~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~ 51 (254)
T PRK12746 6 GKVALVTGASR--GIGRAIAMRLANDGALVAIHYGRNKQAADETIREI 51 (254)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 36899999998 9999999999999999865 7777777666554
No 116
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.78 E-value=0.076 Score=56.92 Aligned_cols=89 Identities=21% Similarity=0.272 Sum_probs=66.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc----
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---- 367 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg---- 367 (474)
..++|+++||. ++|.-+|.+|+++|++.++ |+.+|-++|.++++.+. +..+...+ .++||+|.+
T Consensus 177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~----~~l~el~~~l~~~DvVissTsa~ 249 (414)
T COG0373 177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA----VALEELLEALAEADVVISSTSAP 249 (414)
T ss_pred ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee----ecHHHHHHhhhhCCEEEEecCCC
Confidence 68899999998 9999999999999966555 99999999999988222 21222222 677888844
Q ss_pred -CcCChhhhhcC---CCCceeecccccCcc
Q 011973 368 -DDLTGKEQARA---PKGTIFIPYTQIPPR 393 (474)
Q Consensus 368 -~~i~~~eq~~a---~~G~~f~~~~~v~p~ 393 (474)
-+|+.++...+ ++..+++|++ +|+.
T Consensus 250 ~~ii~~~~ve~a~~~r~~~livDia-vPRd 278 (414)
T COG0373 250 HPIITREMVERALKIRKRLLIVDIA-VPRD 278 (414)
T ss_pred ccccCHHHHHHHHhcccCeEEEEec-CCCC
Confidence 34666655544 4447899999 8887
No 117
>PRK06057 short chain dehydrogenase; Provisional
Probab=94.78 E-value=0.051 Score=52.34 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=38.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 7 ~~~vlItGasg--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 52 (255)
T PRK06057 7 GRVAVITGGGS--GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG 52 (255)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Confidence 36899999998 9999999999999999988 88888888777654
No 118
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.77 E-value=0.04 Score=49.18 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=35.3
Q ss_pred cEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cc--hhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--IC--KDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~--~~~~~~l~~~~~ 343 (474)
+.|+++|+++ -||+++|+.|+++ +.+|.+ |+ .++.+++.++++
T Consensus 1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~ 48 (167)
T PF00106_consen 1 KTVLITGASS--GIGRALARALARRGARVVILTSRSEDSEGAQELIQELK 48 (167)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCC--HHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence 5789999997 9999999999988 556566 77 778888877765
No 119
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.77 E-value=0.075 Score=49.96 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=33.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~ 342 (474)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+. ++.+.+.+++
T Consensus 5 ~~~vlItG~sg--~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 50 (248)
T PRK05557 5 GKVALVTGASR--GIGRAIAERLAAQGANVVINYASSEAGAEALVAEI 50 (248)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 46899999998 9999999999999999966 433 3455555443
No 120
>PRK09135 pteridine reductase; Provisional
Probab=94.75 E-value=0.078 Score=50.11 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=35.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+.+|+.|+++|.+|.+ | ++++.+.+++++
T Consensus 6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK09135 6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL 51 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 4 455566665544
No 121
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.74 E-value=0.052 Score=52.16 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=37.5
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.++++++
T Consensus 2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 45 (248)
T PRK10538 2 IVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG 45 (248)
T ss_pred EEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 589999998 9999999999999999998 88888888877654
No 122
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.73 E-value=0.066 Score=52.02 Aligned_cols=140 Identities=16% Similarity=0.151 Sum_probs=87.8
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Cccccccceeeeccccc--CceeEEE--EcCcCCh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLTG 372 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~-~~~~~~~~l~~~t~~~~--~~~~vwi--vg~~i~~ 372 (474)
+|+++||+| ++|+.++.-..+||.+|+- ||..+...+|.. +.+.. +...++..+ ...+++| .|.+...
T Consensus 2 KIaiIgAsG--~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~D---ifd~~~~a~~l~g~DaVIsA~~~~~~~ 76 (211)
T COG2910 2 KIAIIGASG--KAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKD---IFDLTSLASDLAGHDAVISAFGAGASD 76 (211)
T ss_pred eEEEEecCc--hhHHHHHHHHHhCCCeeEEEEeChHhccccccceeeccc---ccChhhhHhhhcCCceEEEeccCCCCC
Confidence 689999999 9999999999999999998 999877654322 11111 222222211 2333333 4444222
Q ss_pred hhh-----------------------------hcCCCCceeecccccCcc-------------CCC----CCeeeecCCc
Q 011973 373 KEQ-----------------------------ARAPKGTIFIPYTQIPPR-------------KLR----KDCFYHSTPA 406 (474)
Q Consensus 373 ~eq-----------------------------~~a~~G~~f~~~~~v~p~-------------~~R----~dc~y~~~~a 406 (474)
.+. .-+-+|+..+|.-+||.+ .+| -|-+|.+-++
T Consensus 77 ~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa 156 (211)
T COG2910 77 NDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAA 156 (211)
T ss_pred hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHH
Confidence 222 123456777777777753 122 5778999999
Q ss_pred cccCCCCccc-c------ccccccCcchhHHHHHhhhhhhhcCCC
Q 011973 407 MIIPPSLSNM-H------SCENWLGRRVMSAWRIAGIIHALEGWD 444 (474)
Q Consensus 407 m~vP~~~~~~-~------~~e~~~prr~~~Ac~a~~~v~alEgw~ 444 (474)
+-.|+.=.|- . -.|-.=..|..+|=-|.+||-++|.=.
T Consensus 157 ~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 157 FFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred hcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence 9999742110 0 022223467888899999999999743
No 123
>PRK09072 short chain dehydrogenase; Provisional
Probab=94.72 E-value=0.067 Score=51.74 Aligned_cols=43 Identities=26% Similarity=0.394 Sum_probs=38.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++++++
T Consensus 5 ~~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (263)
T PRK09072 5 DKRVLLTGASG--GIGQALAEALAAAGARLLLVGRNAEKLEALAARL 49 (263)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 8888898888776
No 124
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.71 E-value=0.046 Score=52.67 Aligned_cols=43 Identities=16% Similarity=0.249 Sum_probs=37.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++.+.+++
T Consensus 12 ~k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i 56 (259)
T PRK08213 12 GKTALVTGGSR--GLGLQIAEALGEAGARVVLSARKAEELEEAAAHL 56 (259)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 47899999998 9999999999999999988 8888888777664
No 125
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=94.68 E-value=0.19 Score=52.53 Aligned_cols=158 Identities=16% Similarity=0.138 Sum_probs=102.6
Q ss_pred HHcCCcEEEeccccc-cccccccCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEeccCCCch
Q 011973 242 DAKGVKVISLGLLNQ-GEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANK 311 (474)
Q Consensus 242 ~k~G~kV~~LG~ln~-~e~ln~~g~l~v~k~p~-~L~irvv~Gnslta-------Avvl~~i-p~~~~~V~l~Gatg~~k 311 (474)
+-.|+|+++ |-... ...|..-.++.+--.|+ +..+-+.||+.+|+ |++.+-+ +++.+.+.++|+- .
T Consensus 65 ~~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGaG---~ 140 (330)
T COG2423 65 DVAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGAG---A 140 (330)
T ss_pred CeEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---H
Confidence 345677766 22222 23344444445554544 35589999999985 3445544 6689999999987 8
Q ss_pred hHHHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE-----EcCcCChhhhhcCCC
Q 011973 312 VANAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL-----VGDDLTGKEQARAPK 380 (474)
Q Consensus 312 ig~ava~~L~--~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi-----vg~~i~~~eq~~a~~ 380 (474)
.++.-+++++ +.-.++.+ |+++.-+++.+.+.......+....+.+ + ..++|++ -.-.++.+.+ +|
T Consensus 141 qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l---~~ 217 (330)
T COG2423 141 QARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWL---KP 217 (330)
T ss_pred HHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhc---CC
Confidence 9999999999 55555666 9999999888886666544433344544 3 6677766 2233444444 79
Q ss_pred Cceeecccc-------cCcc-CCCCCeeeecCCc
Q 011973 381 GTIFIPYTQ-------IPPR-KLRKDCFYHSTPA 406 (474)
Q Consensus 381 G~~f~~~~~-------v~p~-~~R~dc~y~~~~a 406 (474)
|+|+.-+.. ++|+ -.|-||.+-+.+.
T Consensus 218 G~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~ 251 (330)
T COG2423 218 GTHINAIGADAPGKRELDPEVLARADRVVVDSLE 251 (330)
T ss_pred CcEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence 999998874 5555 3445577665554
No 126
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.054 Score=52.66 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=37.8
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 6 ~~k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (276)
T PRK05875 6 QDRTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI 51 (276)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 357899999998 9999999999999999998 7777777776664
No 127
>PRK12828 short chain dehydrogenase; Provisional
Probab=94.67 E-value=0.049 Score=51.01 Aligned_cols=42 Identities=19% Similarity=0.119 Sum_probs=34.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
.+.|+++|++| .||+++|+.|+++|.+|++ |+.++.++..++
T Consensus 7 ~k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~ 50 (239)
T PRK12828 7 GKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQTLPG 50 (239)
T ss_pred CCEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH
Confidence 46799999998 9999999999999999888 766665544433
No 128
>PRK06182 short chain dehydrogenase; Validated
Probab=94.67 E-value=0.056 Score=52.71 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=35.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++.+
T Consensus 3 ~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~l~~~~~ 45 (273)
T PRK06182 3 KKVALVTGASS--GIGKATARRLAAQGYTVYGAARRVDKMEDLAS 45 (273)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 36899999998 9999999999999999998 88888777654
No 129
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.67 E-value=0.046 Score=52.76 Aligned_cols=43 Identities=5% Similarity=0.156 Sum_probs=38.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.++++|+++ -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 5 ~k~~lVtGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i 49 (227)
T PRK08862 5 SSIILITSAGS--VLGRTISCHFARLGATLILCDQDQSALKDTYEQC 49 (227)
T ss_pred CeEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 8999988887664
No 130
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.66 E-value=0.06 Score=54.58 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=27.3
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
++|+|+||+| =||+++++.|.++|.+|..
T Consensus 1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~ 29 (343)
T TIGR01472 1 KIALITGITG--QDGSYLAEFLLEKGYEVHG 29 (343)
T ss_pred CeEEEEcCCC--cHHHHHHHHHHHCCCEEEE
Confidence 4799999999 9999999999999999987
No 131
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.048 Score=51.89 Aligned_cols=44 Identities=20% Similarity=0.250 Sum_probs=38.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++.
T Consensus 6 ~k~vlItG~sg--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~ 51 (239)
T PRK08703 6 DKTILVTGASQ--GLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIV 51 (239)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHH
Confidence 36899999998 9999999999999999998 88888888877653
No 132
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.62 E-value=0.065 Score=51.21 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=32.2
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe--cch--hhHHHHHhh
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLR 341 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~--~~~~~l~~~ 341 (474)
|+|+|||| ++|+.|+++|.+.+.+|.. |+. ++.++|+..
T Consensus 1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~ 43 (233)
T PF05368_consen 1 ILVTGATG--NQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL 43 (233)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT
T ss_pred CEEECCcc--HHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc
Confidence 78999999 9999999999999998888 653 456666654
No 133
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.047 Score=53.94 Aligned_cols=44 Identities=11% Similarity=0.203 Sum_probs=38.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 6 ~k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~ 51 (275)
T PRK05876 6 GRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR 51 (275)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 88888887776653
No 134
>PRK12742 oxidoreductase; Provisional
Probab=94.60 E-value=0.06 Score=50.83 Aligned_cols=43 Identities=23% Similarity=0.258 Sum_probs=36.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|.++|.+|.+ +++++.+++.+++
T Consensus 6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~ 51 (237)
T PRK12742 6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET 51 (237)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh
Confidence 46899999998 9999999999999999876 4667777776654
No 135
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.59 E-value=0.06 Score=51.69 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=38.1
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (257)
T PRK07074 3 RTALVTGAAG--GIGQALARRFLAAGDRVLALDIDAAALAAFADALG 47 (257)
T ss_pred CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999988 88888888877763
No 136
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=94.54 E-value=0.17 Score=55.27 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=91.8
Q ss_pred cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec--C
Q 011973 295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG--D 368 (474)
Q Consensus 295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg--~ 368 (474)
.-..++|.|+|.- .||+++|+.|...|.+|+..+.+....++... .+. +..+.+ . +.+|++| .| .
T Consensus 251 ~LaGKtVgVIG~G---~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~-----~~~~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 251 MIAGKTVVVCGYG---DVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGY-----QVVTLEDVVETADIFVTATGNKD 321 (476)
T ss_pred CcCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCc-----eeccHHHHHhcCCEEEECCCccc
Confidence 3457799999966 89999999999999999883222222222111 111 112343 2 5666765 33 4
Q ss_pred cCChhhhhcCCCCceeecccccCcc----CCC----CCeeee--cCCccccCC----------CCccccccccccCcchh
Q 011973 369 DLTGKEQARAPKGTIFIPYTQIPPR----KLR----KDCFYH--STPAMIIPP----------SLSNMHSCENWLGRRVM 428 (474)
Q Consensus 369 ~i~~~eq~~a~~G~~f~~~~~v~p~----~~R----~dc~y~--~~~am~vP~----------~~~~~~~~e~~~prr~~ 428 (474)
.|+.+....|++|++++.+++++.+ .++ -|..-. ......+|. .+-|+. |-.+.|..+|
T Consensus 322 iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~-~~~GhP~~vM 400 (476)
T PTZ00075 322 IITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLG-CATGHPSFVM 400 (476)
T ss_pred ccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccC-CCCCCCeeEe
Confidence 6888999999999999999997633 122 111211 111122442 356677 8889999999
Q ss_pred HHHHHhhhhhhhcCCCCCc
Q 011973 429 SAWRIAGIIHALEGWDLNE 447 (474)
Q Consensus 429 ~Ac~a~~~v~alEgw~~~e 447 (474)
+--++-=.+-.++=|..++
T Consensus 401 d~sfa~Q~la~~~l~~~~~ 419 (476)
T PTZ00075 401 SNSFTNQVLAQIELWENRD 419 (476)
T ss_pred eHHHHHHHHHHHHHHhccC
Confidence 9988877777777765544
No 137
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.53 E-value=0.055 Score=54.43 Aligned_cols=44 Identities=18% Similarity=0.183 Sum_probs=39.1
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 6 ~k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~ 51 (322)
T PRK07453 6 KGTVIITGASS--GVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG 51 (322)
T ss_pred CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence 46799999998 9999999999999999988 88888888877763
No 138
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.48 E-value=0.11 Score=52.46 Aligned_cols=120 Identities=18% Similarity=0.175 Sum_probs=70.3
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccc
Q 011973 280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY 356 (474)
Q Consensus 280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~ 356 (474)
|||-....+.--..++. .++|+|.||-| .|||++.+|.+.|++ +.+ |+.++-++|.+++....... .
T Consensus 105 TD~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~~~------~ 174 (272)
T PRK12550 105 TDYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEWRPD------L 174 (272)
T ss_pred cCHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcchhh------c
Confidence 66766665553334433 35899999976 789999999998975 777 99999999988753221100 0
Q ss_pred ccCceeEEE----EcCc--C----ChhhhhcCCCCceeecccccCcc-----CCC-CCeeeecCCcccc
Q 011973 357 AAHKTKIWL----VGDD--L----TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII 409 (474)
Q Consensus 357 ~~~~~~vwi----vg~~--i----~~~eq~~a~~G~~f~~~~~v~p~-----~~R-~dc~y~~~~am~v 409 (474)
....++++| +|-. . .|-+....+++..++|+.--|++ +.| +-|.+..+..|-+
T Consensus 175 ~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~i~Gl~MLi 243 (272)
T PRK12550 175 GGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAETPLIRYARARGKTVITGAEVIA 243 (272)
T ss_pred ccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccCHHHHHHHHCcCeEeCCHHHHH
Confidence 001345555 2211 0 01122234677777777733332 122 5566666666644
No 139
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.057 Score=51.69 Aligned_cols=44 Identities=23% Similarity=0.228 Sum_probs=38.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+.+.+++.
T Consensus 8 ~k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~ 53 (252)
T PRK07035 8 GKIALVTGASR--GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIV 53 (252)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888888877754
No 140
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.062 Score=50.92 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=37.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (250)
T PRK12939 7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFNDGLAAEARELAAAL 51 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 47899999998 9999999999999999888 7888777776664
No 141
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.079 Score=50.37 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=38.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.++++|++| .||+++|+.|.++|.+|.+ |+.++.+.+.+++.
T Consensus 5 ~k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (252)
T PRK06138 5 GRVAIVTGAGS--GIGRATAKLFAREGARVVVADRDAEAAERVAAAIA 50 (252)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh
Confidence 46899999998 9999999999999999988 88888777776653
No 142
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.43 E-value=0.07 Score=52.19 Aligned_cols=43 Identities=12% Similarity=0.079 Sum_probs=38.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.|+++|++| -||+++|+.|.++|.+|.+ |+.++++++++++.
T Consensus 4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~ 48 (275)
T PRK08263 4 KVWFITGASR--GFGRAWTEAALERGDRVVATARDTATLADLAEKYG 48 (275)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc
Confidence 5799999998 9999999999999999888 88888888877653
No 143
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.42 E-value=0.058 Score=51.67 Aligned_cols=43 Identities=21% Similarity=0.170 Sum_probs=37.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++
T Consensus 7 ~k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (253)
T PRK06172 7 GKVALVTGGAA--GIGRATALAFAREGAKVVVADRDAAGGEETVALI 51 (253)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8888877776664
No 144
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.38 E-value=0.074 Score=50.26 Aligned_cols=44 Identities=18% Similarity=0.229 Sum_probs=37.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| -||+++|+.|+++|..|.+ |+.++++.+.++++
T Consensus 6 ~~~vlItGa~g--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 51 (245)
T PRK12936 6 GRKALVTGASG--GIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG 51 (245)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999887 77778877766553
No 145
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=94.38 E-value=0.072 Score=52.89 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=30.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 334 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~ 334 (474)
++|+|+|++| -||+.+++.|.++|.+|.. |+.++
T Consensus 5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 5 KVVCVTGASG--YIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CEEEEECChH--HHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 6899999999 9999999999999999876 66554
No 146
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.38 E-value=0.063 Score=51.62 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=36.9
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~ 47 (259)
T PRK12384 3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVADINSEKAANVAQEIN 47 (259)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 78777777766643
No 147
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=94.37 E-value=0.097 Score=50.64 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=37.4
Q ss_pred EEEEeccCCCchhHHHHHHHHhc----cCcEEEe--cchhhHHHHHhhCcc
Q 011973 300 HVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~----~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.|+++|+++ -||+++|+.|++ .|.+|.+ |++++++.+++++..
T Consensus 2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~ 50 (256)
T TIGR01500 2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGA 50 (256)
T ss_pred EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHh
Confidence 588999997 999999999996 7999888 899999988877643
No 148
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.36 E-value=0.15 Score=51.95 Aligned_cols=125 Identities=16% Similarity=0.182 Sum_probs=71.9
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cch---hhHHHHHhhCccccccceeee
Q 011973 280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICK---DDYEKLKLRIPVEAQHNLVLS 353 (474)
Q Consensus 280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~---~~~~~l~~~~~~~~~~~l~~~ 353 (474)
|||--...+.--..+....++|+|.||-| . ||||+..|++.|+ ++++ |+. ++.++|.+++....... +..
T Consensus 106 TD~~Gf~~~l~~~~~~~~~k~vlvlGaGG--a-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~-~~~ 181 (288)
T PRK12749 106 TDGTGHIRAIKESGFDIKGKTMVLLGAGG--A-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTV 181 (288)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEECCcH--H-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCce-EEE
Confidence 66666655554334444456899999987 3 8999999998887 5666 773 58888888765433221 111
Q ss_pred ccc------c-c-CceeEEE----EcCcC--C---hhhhhcCCCCceeecccccCcc------CCC-CCeeeecCCcccc
Q 011973 354 TSY------A-A-HKTKIWL----VGDDL--T---GKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII 409 (474)
Q Consensus 354 t~~------~-~-~~~~vwi----vg~~i--~---~~eq~~a~~G~~f~~~~~v~p~------~~R-~dc~y~~~~am~v 409 (474)
.++ + + .+++++| +|-.= + +.+....+++.++.|+. ..|. ..| +-|....+..|-+
T Consensus 182 ~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v-Y~P~~T~ll~~A~~~G~~~~~Gl~ML~ 260 (288)
T PRK12749 182 TDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGMLL 260 (288)
T ss_pred echhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEec-CCCccCHHHHHHHHCCCeEECCHHHHH
Confidence 122 1 2 3567777 33210 0 01222346677777776 4433 112 4566666666543
No 149
>PRK08177 short chain dehydrogenase; Provisional
Probab=94.36 E-value=0.061 Score=50.93 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=34.4
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
+.|+++|++| .||+++|+.|+++|.+|++ |+.++.+.+++
T Consensus 2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (225)
T PRK08177 2 RTALIIGASR--GLGLGLVDRLLERGWQVTATVRGPQQDTALQA 43 (225)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh
Confidence 5799999998 9999999999999999998 77776666543
No 150
>PRK07832 short chain dehydrogenase; Provisional
Probab=94.35 E-value=0.061 Score=52.50 Aligned_cols=43 Identities=14% Similarity=0.161 Sum_probs=36.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.++++|++| -||+++|+.|+++|.+|.+ |+.+.++++.+++.
T Consensus 1 k~vlItGas~--giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~ 45 (272)
T PRK07832 1 KRCFVTGAAS--GIGRATALRLAAQGAELFLTDRDADGLAQTVADAR 45 (272)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 3689999998 9999999999999999888 78888777766643
No 151
>PRK07677 short chain dehydrogenase; Provisional
Probab=94.34 E-value=0.062 Score=51.66 Aligned_cols=43 Identities=26% Similarity=0.392 Sum_probs=37.9
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~ 46 (252)
T PRK07677 2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE 46 (252)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888877654
No 152
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.31 E-value=0.063 Score=51.38 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=37.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (262)
T PRK13394 7 GKTAVVTGAAS--GIGKEIALELARAGAAVAIADLNQDGANAVADEI 51 (262)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8887787777664
No 153
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.07 Score=51.52 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=39.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++..
T Consensus 7 ~k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 53 (259)
T PRK06125 7 GKRVLITGASK--GIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA 53 (259)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 47899999998 9999999999999999988 888888887776543
No 154
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.30 E-value=0.057 Score=51.62 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=38.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~ 57 (247)
T PRK08945 11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGRTEEKLEAVYDEIE 57 (247)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 88887777766654
No 155
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.30 E-value=0.18 Score=51.27 Aligned_cols=62 Identities=21% Similarity=0.162 Sum_probs=46.1
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCcc
Q 011973 280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~~~~~ 344 (474)
|||--...+.--+..+...++|+|.||-| .|||++-.|++.|++ +.+ |+.+|-++|.+++..
T Consensus 109 TD~~Gf~~~L~~~~~~~~~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~ 173 (283)
T PRK14027 109 TDVSGFGRGMEEGLPNAKLDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN 173 (283)
T ss_pred CCHHHHHHHHHhcCcCcCCCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 66766666653222233457899999986 789999999999974 555 899999999887643
No 156
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.29 E-value=0.075 Score=50.22 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=37.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 5 ~~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (238)
T PRK05786 5 GKKVAIIGVSE--GLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLS 50 (238)
T ss_pred CcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35899999998 9999999999999999998 88888887765543
No 157
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.29 E-value=0.066 Score=51.66 Aligned_cols=44 Identities=14% Similarity=0.220 Sum_probs=36.1
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
...+.|+++|++| -||+++|+.|+++|.+|.+ |+ ++.+++++++
T Consensus 13 l~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~ 58 (258)
T PRK06935 13 LDGKVAIVTGGNT--GLGQGYAVALAKAGADIIITTHG-TNWDETRRLI 58 (258)
T ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence 3457899999998 9999999999999999988 55 5566665554
No 158
>PRK05599 hypothetical protein; Provisional
Probab=94.28 E-value=0.059 Score=52.11 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=37.0
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.|+++|+++ -||+++|+.|++ |.+|.+ |++++++++.+++.+
T Consensus 2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l~~ 45 (246)
T PRK05599 2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASDLRQ 45 (246)
T ss_pred eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHh
Confidence 589999997 999999999995 999999 999999998887643
No 159
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.20 E-value=0.068 Score=52.16 Aligned_cols=44 Identities=23% Similarity=0.256 Sum_probs=38.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 10 ~k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 55 (278)
T PRK08277 10 GKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK 55 (278)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888888877754
No 160
>PRK05693 short chain dehydrogenase; Provisional
Probab=94.19 E-value=0.077 Score=51.74 Aligned_cols=41 Identities=24% Similarity=0.306 Sum_probs=35.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+.++.+
T Consensus 2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 44 (274)
T PRK05693 2 PVVLITGCSS--GIGRALADAFKAAGYEVWATARKAEDVEALAAA 44 (274)
T ss_pred CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC
Confidence 4789999998 9999999999999999988 888887777543
No 161
>PRK08589 short chain dehydrogenase; Validated
Probab=94.18 E-value=0.068 Score=52.36 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=36.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+ ++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~ 50 (272)
T PRK08589 6 NKVAVITGAST--GIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIK 50 (272)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHH
Confidence 46899999998 9999999999999999998 77 77777766653
No 162
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.16 E-value=0.083 Score=51.51 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=36.8
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+.+++++
T Consensus 4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 47 (280)
T PRK06914 4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA 47 (280)
T ss_pred CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 5689999998 9999999999999999988 8888887776653
No 163
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.13 E-value=0.071 Score=51.91 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=36.1
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
+|+++|++| -||+++|+.|+++|.+|++ |+.++++.+.+++
T Consensus 2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 44 (270)
T PRK05650 2 RVMITGAAS--GLGRAIALRWAREGWRLALADVNEEGGEETLKLL 44 (270)
T ss_pred EEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 689999998 9999999999999999988 8888877766654
No 164
>PRK06953 short chain dehydrogenase; Provisional
Probab=94.13 E-value=0.078 Score=50.07 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=35.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.++++.
T Consensus 2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~ 43 (222)
T PRK06953 2 KTVLIVGASR--GIGREFVRQYRADGWRVIATARDAAALAALQA 43 (222)
T ss_pred ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence 4689999998 9999999999999999988 77777777664
No 165
>PRK07814 short chain dehydrogenase; Provisional
Probab=94.11 E-value=0.08 Score=51.42 Aligned_cols=45 Identities=13% Similarity=0.231 Sum_probs=38.7
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+.|+++|++| -||+++|++|.++|.+|.+ |+.++++++.+++.
T Consensus 9 ~~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~ 55 (263)
T PRK07814 9 DDQVAVVTGAGR--GLGAAIALAFAEAGADVLIAARTESQLDEVAEQIR 55 (263)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 88888887776653
No 166
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=94.11 E-value=0.17 Score=55.77 Aligned_cols=181 Identities=15% Similarity=0.149 Sum_probs=106.9
Q ss_pred HHHcCCcEEEecccc------------ccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEeccCC
Q 011973 241 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308 (474)
Q Consensus 241 A~k~G~kV~~LG~ln------------~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~~~~~V~l~Gatg 308 (474)
..++|+.++++=.+. ++-++.|+..+..+-| .|.-++ +|.+-++. .+| .++|+|.|+-
T Consensus 104 l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~--~lgr~~-~g~~taag----~vp--~akVlViGaG- 173 (511)
T TIGR00561 104 LAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAH--EFGRFF-TGQITAAG----KVP--PAKVLVIGAG- 173 (511)
T ss_pred HHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHH--Hhhhhc-CCceecCC----CCC--CCEEEEECCC-
Confidence 356778888876443 3445666655444433 033333 56554332 444 4899999985
Q ss_pred CchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc------------ccceeeec-c--------cc-c-CceeE
Q 011973 309 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA------------QHNLVLST-S--------YA-A-HKTKI 363 (474)
Q Consensus 309 ~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~------------~~~l~~~t-~--------~~-~-~~~~v 363 (474)
-+|.+.+..+...|.+|.. ++.++++..++ ++.+. ..+-...+ . +. . +.+||
T Consensus 174 --~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DI 250 (511)
T TIGR00561 174 --VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDI 250 (511)
T ss_pred --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCE
Confidence 8999999999999998887 77778777665 33322 01100011 1 11 1 45677
Q ss_pred EE--E---cC----cCChhhhhcCCCCceeecccccCcc----CCCCCeeeecCCccccCCCCccccccccccCcc---h
Q 011973 364 WL--V---GD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR---V 427 (474)
Q Consensus 364 wi--v---g~----~i~~~eq~~a~~G~~f~~~~~v~p~----~~R~dc~y~~~~am~vP~~~~~~~~~e~~~prr---~ 427 (474)
+| + |+ .++.++++.+++|.+++|++ .++- -.|.+-+|.+. +.+. +.|--.+|.+ +
T Consensus 251 VI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA-~d~GGn~E~t~p~~~~~~~------~GV~--~~gv~nlPs~~p~~ 321 (511)
T TIGR00561 251 IITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA-AEQGGNCEYTKPGEVYTTE------NQVK--VIGYTDLPSRLPTQ 321 (511)
T ss_pred EEECcccCCCCCCeeehHHHHhhCCCCCEEEEee-eCCCCCEEEecCceEEEec------CCEE--EEeeCCccccCHHH
Confidence 66 3 43 38999999999999999999 6654 22333333221 1122 3355566665 3
Q ss_pred hHHHHHhhhhhhhcCC
Q 011973 428 MSAWRIAGIIHALEGW 443 (474)
Q Consensus 428 ~~Ac~a~~~v~alEgw 443 (474)
.+--.+..++.-|+.-
T Consensus 322 AS~l~s~nl~~~l~~l 337 (511)
T TIGR00561 322 SSQLYGTNLVNLLKLL 337 (511)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3335566666555553
No 167
>PRK07806 short chain dehydrogenase; Provisional
Probab=94.09 E-value=0.12 Score=49.30 Aligned_cols=43 Identities=21% Similarity=0.224 Sum_probs=34.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+. ++.+.+.+++
T Consensus 6 ~k~vlItGasg--giG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l 51 (248)
T PRK07806 6 GKTALVTGSSR--GIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI 51 (248)
T ss_pred CcEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence 36799999998 9999999999999999877 654 4566665554
No 168
>PRK09242 tropinone reductase; Provisional
Probab=94.07 E-value=0.076 Score=51.08 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=38.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.++++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 9 ~k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~ 54 (257)
T PRK09242 9 GQTALITGASK--GIGLAIAREFLGLGADVLIVARDADALAQARDELA 54 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 88888888877643
No 169
>PRK07060 short chain dehydrogenase; Provisional
Probab=94.03 E-value=0.11 Score=49.21 Aligned_cols=45 Identities=22% Similarity=0.285 Sum_probs=38.7
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
...+.++++|++| -||+++|+.|.++|.+|.+ |+.++.+++.++.
T Consensus 7 ~~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 53 (245)
T PRK07060 7 FSGKSVLVTGASS--GIGRACAVALAQRGARVVAAARNAAALDRLAGET 53 (245)
T ss_pred cCCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 3456899999998 9999999999999999988 8888888777664
No 170
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=94.03 E-value=0.055 Score=55.66 Aligned_cols=68 Identities=19% Similarity=0.315 Sum_probs=46.5
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc---ccceeeeccccc-CceeEEEE
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHNLVLSTSYAA-HKTKIWLV 366 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~---~~~l~~~t~~~~-~~~~vwiv 366 (474)
|...+|.++|| | .||+++|..|+.+++ ++.| +++++++-...++..-. ....+..++|++ ++++|+|+
T Consensus 4 ~~~~ki~iiGa-G--~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIi 79 (315)
T PRK00066 4 KQHNKVVLVGD-G--AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVI 79 (315)
T ss_pred CCCCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEE
Confidence 34469999999 8 999999999998888 5666 67777765555533221 111233345666 88888775
No 171
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.02 E-value=0.16 Score=52.33 Aligned_cols=88 Identities=15% Similarity=0.052 Sum_probs=61.2
Q ss_pred cCCCcEEEEeccCCCchhHHHHHHHHh-ccCc-EEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcC
Q 011973 295 PKTTAHVLLRGTVTANKVANAVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGD 368 (474)
Q Consensus 295 p~~~~~V~l~Gatg~~kig~ava~~L~-~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~ 368 (474)
+++.++|.++|+- ..|++.+++|+ .+++ +|.+ |+.++.+++.+++..+.+.......+.+ + ++++|++.-.
T Consensus 126 ~~~~~~v~iiGaG---~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 126 REDSSVVAIFGAG---MQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTT 202 (326)
T ss_pred CCCCcEEEEECCC---HHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEec
Confidence 5677899999996 69999999998 4664 4666 9999999999887554333322223444 3 7788877222
Q ss_pred -----cCChhhhhcCCCCceeeccc
Q 011973 369 -----DLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 369 -----~i~~~eq~~a~~G~~f~~~~ 388 (474)
.++++. .++|+++..+.
T Consensus 203 ~s~~p~i~~~~---l~~g~~i~~vg 224 (326)
T TIGR02992 203 PSETPILHAEW---LEPGQHVTAMG 224 (326)
T ss_pred CCCCcEecHHH---cCCCcEEEeeC
Confidence 234444 48999988775
No 172
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=93.98 E-value=0.15 Score=51.79 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=33.4
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~--v~v~l--~~~~~~~~l~~~~ 342 (474)
+.|+|+|++| -||+++++.|+++| .+|.+ |+..+.+.+++++
T Consensus 5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~ 50 (324)
T TIGR03589 5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF 50 (324)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh
Confidence 5799999999 99999999999876 67776 6655555665554
No 173
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.98 E-value=0.055 Score=55.25 Aligned_cols=44 Identities=20% Similarity=0.301 Sum_probs=37.6
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
..+-|+++||++ =||.++|..|+++|.++.+ |..+|++.+++++
T Consensus 11 ~~kvVvITGASs--GIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l 56 (282)
T KOG1205|consen 11 AGKVVLITGASS--GIGEALAYELAKRGAKLVLVARRARRLERVAEEL 56 (282)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHH
Confidence 356789999995 9999999999999999777 8888888886663
No 174
>PRK07069 short chain dehydrogenase; Validated
Probab=93.97 E-value=0.12 Score=49.11 Aligned_cols=41 Identities=20% Similarity=0.331 Sum_probs=35.4
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCc
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIP 343 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~-~~~~~~l~~~~~ 343 (474)
|+++|++| -||+++|+.|+++|.+|.+ |+ .++++.+++++.
T Consensus 2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 45 (251)
T PRK07069 2 AFITGAAG--GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEIN 45 (251)
T ss_pred EEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH
Confidence 79999998 9999999999999999988 66 677777776654
No 175
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.97 E-value=0.089 Score=53.16 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=38.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+++|+++ -||+++|+.|+++| .+|.+ |+.++.+++++++.
T Consensus 3 ~k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~ 49 (314)
T TIGR01289 3 KPTVIITGASS--GLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG 49 (314)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 45889999997 99999999999999 99988 88888888887764
No 176
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.96 E-value=0.086 Score=53.92 Aligned_cols=91 Identities=19% Similarity=0.240 Sum_probs=62.1
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++ .++.+ +.++
T Consensus 140 cTp~avi~lL~~~~i~l~Gk~v~vIG~S~--ivG~Pla~lL~~~gatVtv~~s~t~--------------------~l~~ 197 (284)
T PRK14179 140 CTPAGIMEMFREYNVELEGKHAVVIGRSN--IVGKPMAQLLLDKNATVTLTHSRTR--------------------NLAE 197 (284)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHHCCCEEEEECCCCC--------------------CHHH
Confidence 3666666544 44678999999998 9999999999999999999 22111 1111
Q ss_pred --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCeee
Q 011973 359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 401 (474)
Q Consensus 359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y 401 (474)
++++|+| +| +.++++ +.++|+++||++ +.+. ++.-|+-+
T Consensus 198 ~~~~ADIVI~avg~~~~v~~~---~ik~GavVIDvg-in~~~~gkl~GDVdf 245 (284)
T PRK14179 198 VARKADILVVAIGRGHFVTKE---FVKEGAVVIDVG-MNRDENGKLIGDVDF 245 (284)
T ss_pred HHhhCCEEEEecCccccCCHH---HccCCcEEEEec-ceecCCCCeecCccH
Confidence 3555655 33 335544 369999999999 6662 44455553
No 177
>PLN02583 cinnamoyl-CoA reductase
Probab=93.92 E-value=0.18 Score=50.44 Aligned_cols=31 Identities=16% Similarity=0.111 Sum_probs=28.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
..+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 5 ~~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~ 35 (297)
T PLN02583 5 SSKSVCVMDASG--YVGFWLVKRLLSRGYTVHA 35 (297)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 356899999999 9999999999999999987
No 178
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=93.91 E-value=0.33 Score=52.28 Aligned_cols=138 Identities=15% Similarity=0.159 Sum_probs=85.7
Q ss_pred cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--Ec-
Q 011973 295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG- 367 (474)
Q Consensus 295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg- 367 (474)
....++|+|+|. | .||+.+|+.|...|.+|++ +++.+....... +. . +.+.+ . ..++++| .|
T Consensus 209 ~l~Gk~VlViG~-G--~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~---G~--~---v~~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 209 LIAGKVVVVAGY-G--DVGKGCAQRLRGLGARVIVTEVDPICALQAAMD---GF--R---VMTMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc---CC--E---ecCHHHHHhCCCEEEECCCC
Confidence 335679999997 5 9999999999999999999 454443222111 11 1 11332 2 5566766 33
Q ss_pred -CcCChhhhhcCCCCceeecccccCcc--------------CCCCCeeeecCCc---ccc--CCCCccccccccccCcch
Q 011973 368 -DDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MII--PPSLSNMHSCENWLGRRV 427 (474)
Q Consensus 368 -~~i~~~eq~~a~~G~~f~~~~~v~p~--------------~~R~dc~y~~~~a---m~v--P~~~~~~~~~e~~~prr~ 427 (474)
+.++.+....+++|++++-+..++.+ +.|+.+.-...|. +.+ -+..-|+- |..+.|..+
T Consensus 278 ~~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~-~~~ghp~~v 356 (425)
T PRK05476 278 KDVITAEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLG-AATGHPSEV 356 (425)
T ss_pred HHHHHHHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccC-CCCCCccee
Confidence 35777888899999999998876642 2233332111111 111 12355566 888999999
Q ss_pred hHHHHHhhhhhhhcCCC
Q 011973 428 MSAWRIAGIIHALEGWD 444 (474)
Q Consensus 428 ~~Ac~a~~~v~alEgw~ 444 (474)
|.--+|.=.+-+++=|.
T Consensus 357 md~sfa~q~l~~~~l~~ 373 (425)
T PRK05476 357 MDMSFANQALAQIELFT 373 (425)
T ss_pred eCHHHHHHHHHHHHHHh
Confidence 97766655555555554
No 179
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=93.91 E-value=0.11 Score=49.40 Aligned_cols=43 Identities=21% Similarity=0.326 Sum_probs=37.1
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.++++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 3 ~~~ilItGas~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 47 (250)
T TIGR03206 3 DKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI 47 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence 46799999998 9999999999999999988 7887777776654
No 180
>PLN02650 dihydroflavonol-4-reductase
Probab=93.91 E-value=0.12 Score=52.42 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=34.6
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
..++|+|+|++| -||+++++.|.++|.+|.. |+.++.+.++.
T Consensus 4 ~~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~ 47 (351)
T PLN02650 4 QKETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPANVKKVKH 47 (351)
T ss_pred CCCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH
Confidence 356899999999 9999999999999999976 76665555543
No 181
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.89 E-value=0.17 Score=46.41 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=35.8
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+|.++|+- ..|.|+|..|+++|.+|+| |+++..+.|++.
T Consensus 1 KI~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~ 41 (157)
T PF01210_consen 1 KIAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINET 41 (157)
T ss_dssp EEEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHH
T ss_pred CEEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 58899987 8999999999999999999 888999999876
No 182
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.88 E-value=0.089 Score=49.94 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=37.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 7 ~~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~ 51 (239)
T PRK07666 7 GKNALITGAGR--GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV 51 (239)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36799999998 9999999999999999988 8888877776664
No 183
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.88 E-value=0.098 Score=51.12 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=27.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~ 37 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAF 37 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 35799999853347999999999999999988
No 184
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.85 E-value=0.11 Score=51.07 Aligned_cols=44 Identities=25% Similarity=0.288 Sum_probs=37.2
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
+.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 ~~~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 54 (274)
T PRK07775 9 DRRPALVAGASS--GIGAATAIELAAAGFPVALGARRVEKCEELVDKI 54 (274)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999877 7777777766554
No 185
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.81 E-value=0.1 Score=48.91 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=33.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 341 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~ 341 (474)
.++|+|+|++| .||+++|+.|+++|.+|++ ++.++.+.+.++
T Consensus 6 ~~~vlItGasg--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (249)
T PRK12825 6 GRVALVTGAAR--GLGRAIALRLARAGADVVVHYRSDEEAAEELVEA 50 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 35899999999 9999999999999999876 445555555554
No 186
>PRK07904 short chain dehydrogenase; Provisional
Probab=93.80 E-value=0.084 Score=51.43 Aligned_cols=45 Identities=13% Similarity=0.222 Sum_probs=36.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhh-HHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDD-YEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~-~~~l~~~~~~ 344 (474)
.+.|+++|++| -||+++|+.|+++| .+|.+ |+.++ ++++.+++..
T Consensus 8 ~~~vlItGas~--giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~ 56 (253)
T PRK07904 8 PQTILLLGGTS--EIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKA 56 (253)
T ss_pred CcEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHh
Confidence 45799999998 99999999999885 89888 87775 7777766543
No 187
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.72 E-value=0.12 Score=50.24 Aligned_cols=47 Identities=17% Similarity=0.224 Sum_probs=35.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~---~~~~l~~~~~ 343 (474)
..+.|+++|+++|+-||+++|+.|+++|.+|.+ |+.+ +.++++++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~ 60 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD 60 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc
Confidence 457899999983236999999999999999988 6543 3455555543
No 188
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.72 E-value=0.17 Score=51.15 Aligned_cols=42 Identities=21% Similarity=0.184 Sum_probs=34.2
Q ss_pred CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973 294 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 337 (474)
Q Consensus 294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~ 337 (474)
.|...++|+++|++| -||+.+++.|.++|.+|.. |+.+....
T Consensus 5 ~~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~~~r~~~~~~~ 48 (338)
T PLN00198 5 TPTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNTTVRDPENQKK 48 (338)
T ss_pred cCCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEEEECCCCCHHH
Confidence 366678899999999 9999999999999999854 66554443
No 189
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.71 E-value=0.12 Score=49.17 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=36.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~ 343 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ +++++.+.+.++++
T Consensus 5 ~k~ilItGas~--gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~ 51 (253)
T PRK08642 5 EQTVLVTGGSR--GLGAAIARAFAREGARVVVNYHQSEDAAEALADELG 51 (253)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 36799999998 9999999999999999976 45666777766553
No 190
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=93.71 E-value=0.12 Score=45.34 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=53.9
Q ss_pred EEEEeccCCCchhHHHHHHHHh-ccCcEEEe---cchhhHHHHHhhCccccccceeeeccc--cc-CceeEEE--EcCcC
Q 011973 300 HVLLRGTVTANKVANAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSY--AA-HKTKIWL--VGDDL 370 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~-~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~--~~-~~~~vwi--vg~~i 370 (474)
+|+++|||| -+|+.+++.|. .....++. ++++.-+.+....+.-.+..-+.+.+. ++ .++++++ .++..
T Consensus 1 rV~IvGAtG--~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~ 78 (121)
T PF01118_consen 1 RVAIVGATG--YVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA 78 (121)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH
T ss_pred CEEEECCCC--HHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH
Confidence 589999999 99999999999 55565554 333122333333321111111222222 23 7788876 33332
Q ss_pred Chh-hhhcCCCCceeecccccCcc-CCCCCeeee
Q 011973 371 TGK-EQARAPKGTIFIPYTQIPPR-KLRKDCFYH 402 (474)
Q Consensus 371 ~~~-eq~~a~~G~~f~~~~~v~p~-~~R~dc~y~ 402 (474)
..+ ...-+++|..++|.| .. .+.+||.|.
T Consensus 79 ~~~~~~~~~~~g~~ViD~s---~~~R~~~~~~~~ 109 (121)
T PF01118_consen 79 SKELAPKLLKAGIKVIDLS---GDFRLDDDVPYG 109 (121)
T ss_dssp HHHHHHHHHHTTSEEEESS---STTTTSTTSEEE
T ss_pred HHHHHHHHhhCCcEEEeCC---HHHhCCCCCCEE
Confidence 222 222248999888887 22 333566664
No 191
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.69 E-value=0.13 Score=52.10 Aligned_cols=44 Identities=16% Similarity=0.172 Sum_probs=35.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~----------~~~~~~l~~~~~ 343 (474)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+ +++.+++.+++.
T Consensus 8 ~k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~ 63 (305)
T PRK08303 8 GKVALVAGATR--GAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVT 63 (305)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHH
Confidence 46899999997 8999999999999999988 65 356666666553
No 192
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.67 E-value=0.12 Score=51.12 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 332 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~ 332 (474)
.+.++|+|+++++-||+++|+.|+++|.+|.+ |++
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 46799999994235999999999999999998 554
No 193
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=93.66 E-value=0.11 Score=50.07 Aligned_cols=44 Identities=16% Similarity=0.251 Sum_probs=38.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
..+.|+|+|++| -||+++|+.|+++|.++.+ |+.++.+.+.+++
T Consensus 10 ~~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l 55 (255)
T PRK06113 10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEI 55 (255)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 457899999998 9999999999999999988 7778777776664
No 194
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.64 E-value=0.11 Score=50.83 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=35.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-----~~~~~~~~l~~~~~ 343 (474)
.+.|+++|+++++-||+|+|+.|+++|.+|.+ |++++++++.++++
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~ 56 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG 56 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC
Confidence 46899999753247999999999999999987 33566666666553
No 195
>PRK06181 short chain dehydrogenase; Provisional
Probab=93.64 E-value=0.096 Score=50.45 Aligned_cols=43 Identities=16% Similarity=0.282 Sum_probs=36.4
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.|+|+|++| .||+++|+.|+++|.+|++ |+.++.+.+.+++.
T Consensus 2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~ 46 (263)
T PRK06181 2 KVVIITGASE--GIGRALAVRLARAGAQLVLAARNETRLASLAQELA 46 (263)
T ss_pred CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 4689999998 9999999999999999998 77777776665543
No 196
>PRK08264 short chain dehydrogenase; Validated
Probab=93.64 E-value=0.094 Score=49.66 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=32.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHH
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEK 337 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~ 337 (474)
.+.|+++|++| .||+++|+.|+++|. +|++ |+.++.++
T Consensus 6 ~~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~ 46 (238)
T PRK08264 6 GKVVLVTGANR--GIGRAFVEQLLARGAAKVYAAARDPESVTD 46 (238)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCcccEEEEecChhhhhh
Confidence 46799999998 999999999999998 8888 76665543
No 197
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=93.63 E-value=0.1 Score=50.62 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=33.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 338 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l 338 (474)
.++|+++||+| .||+++++.|.++|.+|+. |+.++.+.+
T Consensus 17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 57 (251)
T PLN00141 17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAGVRDVDKAKTS 57 (251)
T ss_pred CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence 56899999999 9999999999999999876 777766544
No 198
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.62 E-value=0.14 Score=52.35 Aligned_cols=91 Identities=21% Similarity=0.257 Sum_probs=62.9
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|+..|++=+ +-.-++|+|+|.+. -||+-+|..|.++|-.|++ .++. . ++++
T Consensus 140 cTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~atVt~chs~t--~------------------~l~~ 197 (284)
T PRK14190 140 CTPHGILELLKEYNIDISGKHVVVVGRSN--IVGKPVGQLLLNENATVTYCHSKT--K------------------NLAE 197 (284)
T ss_pred CCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEEeCCc--h------------------hHHH
Confidence 3666666533 44688999999998 9999999999999999998 2111 0 1111
Q ss_pred --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCeee
Q 011973 359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 401 (474)
Q Consensus 359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y 401 (474)
+.+||+| +| ..++++.. ++|+++||+. +++. ++--|+-+
T Consensus 198 ~~~~ADIvI~AvG~p~~i~~~~i---k~gavVIDvG-i~~~~~gkl~GDvd~ 245 (284)
T PRK14190 198 LTKQADILIVAVGKPKLITADMV---KEGAVVIDVG-VNRLENGKLCGDVDF 245 (284)
T ss_pred HHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-ccccCCCCeeccCcH
Confidence 3555655 33 35777777 9999999998 6652 44455543
No 199
>PRK06484 short chain dehydrogenase; Validated
Probab=93.60 E-value=0.12 Score=55.40 Aligned_cols=46 Identities=17% Similarity=0.184 Sum_probs=40.6
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
..+.++++|+++ -||+++|+.|+++|.+|.+ |+++++++++++++.
T Consensus 268 ~~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 315 (520)
T PRK06484 268 SPRVVAITGGAR--GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGD 315 (520)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 356899999998 9999999999999999998 888999999887643
No 200
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.55 E-value=0.19 Score=48.51 Aligned_cols=44 Identities=27% Similarity=0.437 Sum_probs=35.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ ++.++.+.+.+++
T Consensus 8 ~~k~vlItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 54 (258)
T PRK09134 8 APRAALVTGAAR--RIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI 54 (258)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999976 4556666666554
No 201
>PRK08291 ectoine utilization protein EutC; Validated
Probab=93.54 E-value=0.25 Score=50.98 Aligned_cols=88 Identities=11% Similarity=0.033 Sum_probs=58.3
Q ss_pred cCCCcEEEEeccCCCchhHHHHHHHHhc-cC-cEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE--
Q 011973 295 PKTTAHVLLRGTVTANKVANAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV-- 366 (474)
Q Consensus 295 p~~~~~V~l~Gatg~~kig~ava~~L~~-~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv-- 366 (474)
+++.++|.++|+- ..|++.+.+|+. ++ .+|.+ |++++.+.+.+++..+.+..+....+.+ + ++++++|.
T Consensus 129 ~~~~~~v~IiGaG---~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT 205 (330)
T PRK08291 129 REDASRAAVIGAG---EQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEee
Confidence 4567899999997 689999999983 55 45666 9999999999887554433322223444 3 67777662
Q ss_pred --cC-cCChhhhhcCCCCceeeccc
Q 011973 367 --GD-DLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 367 --g~-~i~~~eq~~a~~G~~f~~~~ 388 (474)
.+ .++.+ +.++|+++..+.
T Consensus 206 ~s~~p~i~~~---~l~~g~~v~~vg 227 (330)
T PRK08291 206 PSEEPILKAE---WLHPGLHVTAMG 227 (330)
T ss_pred CCCCcEecHH---HcCCCceEEeeC
Confidence 22 23332 347888877653
No 202
>PRK07576 short chain dehydrogenase; Provisional
Probab=93.54 E-value=0.11 Score=50.63 Aligned_cols=45 Identities=13% Similarity=0.280 Sum_probs=38.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 8 ~~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 54 (264)
T PRK07576 8 AGKNVVVVGGTS--GINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQ 54 (264)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 88887777665543
No 203
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.53 E-value=0.14 Score=50.25 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=29.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 333 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~ 333 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.+
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 6 GKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecccc
Confidence 36899999998 9999999999999999988 5543
No 204
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.51 E-value=0.21 Score=50.96 Aligned_cols=84 Identities=19% Similarity=0.225 Sum_probs=57.8
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|++.|++=+ +-.-++|.|+|... -+|+.+|..|.++|-.|++ .++. ++|++.+
T Consensus 134 cTp~av~~ll~~~~i~l~Gk~V~ViGrs~--~vGrpla~lL~~~~atVtv~hs~t--~~L~~~~---------------- 193 (279)
T PRK14178 134 CTPNGIMTLLHEYKISIAGKRAVVVGRSI--DVGRPMAALLLNADATVTICHSKT--ENLKAEL---------------- 193 (279)
T ss_pred CCHHHHHHHHHHcCCCCCCCEEEEECCCc--cccHHHHHHHHhCCCeeEEEecCh--hHHHHHH----------------
Confidence 3566665544 33578999999997 9999999999999999988 2111 1111110
Q ss_pred CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 359 HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 ~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+++|++| +| +.++++.. ++|++++|++ ++.
T Consensus 194 ~~ADIvI~Avgk~~lv~~~~v---k~GavVIDVg-i~~ 227 (279)
T PRK14178 194 RQADILVSAAGKAGFITPDMV---KPGATVIDVG-INQ 227 (279)
T ss_pred hhCCEEEECCCcccccCHHHc---CCCcEEEEee-ccc
Confidence 3556655 44 44666665 9999999999 665
No 205
>PRK12827 short chain dehydrogenase; Provisional
Probab=93.51 E-value=0.19 Score=47.52 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=34.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe------cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT------ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l------~~~~~~~~l~~~~ 342 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+.+.+++
T Consensus 6 ~~~ilItGasg--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 54 (249)
T PRK12827 6 SRRVLITGGSG--GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGI 54 (249)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHH
Confidence 36799999998 9999999999999999877 3455566665554
No 206
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=93.48 E-value=0.23 Score=46.60 Aligned_cols=86 Identities=16% Similarity=0.130 Sum_probs=58.0
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 366 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------ 366 (474)
..++|.++|.- .||+++|+.|..-|.+|.. |+.+.-+..... -+...++++ +.++++++
T Consensus 35 ~g~tvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~--------~~~~~~l~ell~~aDiv~~~~plt~ 103 (178)
T PF02826_consen 35 RGKTVGIIGYG---RIGRAVARRLKAFGMRVIGYDRSPKPEEGADEF--------GVEYVSLDELLAQADIVSLHLPLTP 103 (178)
T ss_dssp TTSEEEEESTS---HHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHT--------TEEESSHHHHHHH-SEEEE-SSSST
T ss_pred CCCEEEEEEEc---CCcCeEeeeeecCCceeEEecccCChhhhcccc--------cceeeehhhhcchhhhhhhhhcccc
Confidence 57899999985 9999999999999999999 444322211111 011224433 55655441
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973 367 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR 393 (474)
Q Consensus 367 --g~~i~~~eq~~a~~G~~f~~~~~---v~p~ 393 (474)
-..|+.++..++|+|++|+-++| |+.+
T Consensus 104 ~T~~li~~~~l~~mk~ga~lvN~aRG~~vde~ 135 (178)
T PF02826_consen 104 ETRGLINAEFLAKMKPGAVLVNVARGELVDED 135 (178)
T ss_dssp TTTTSBSHHHHHTSTTTEEEEESSSGGGB-HH
T ss_pred ccceeeeeeeeeccccceEEEeccchhhhhhh
Confidence 35688899999999999999999 5554
No 207
>PRK06841 short chain dehydrogenase; Provisional
Probab=93.45 E-value=0.14 Score=48.98 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=31.3
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 334 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~ 334 (474)
..+.|+++|++| .||+++|+.|+++|.+|.+ |+.+.
T Consensus 14 ~~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~~~~ 51 (255)
T PRK06841 14 SGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSEDV 51 (255)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 356899999998 9999999999999999998 66553
No 208
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.44 E-value=0.14 Score=50.89 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=35.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~---~~~~~l~~~~~ 343 (474)
.+.|+++|+++++-||+|+|+.|+++|.+|.+ |++ ++++++.++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~ 55 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG 55 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 36889999972236999999999999999998 663 45666655554
No 209
>PRK08219 short chain dehydrogenase; Provisional
Probab=93.33 E-value=0.12 Score=48.13 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=35.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
+.|+|+|++| .||+++|+.|+++ .+|.. |+.++.+.++++.
T Consensus 4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~ 46 (227)
T PRK08219 4 PTALITGASR--GIGAAIARELAPT-HTLLLGGRPAERLDELAAEL 46 (227)
T ss_pred CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh
Confidence 5799999999 9999999999988 88877 8888877776554
No 210
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=93.33 E-value=0.057 Score=51.77 Aligned_cols=54 Identities=19% Similarity=0.357 Sum_probs=38.6
Q ss_pred HhhhccccceecccccccCCCceeeccCcchhhhhhhC-CCCCcccchhHHHHhcCCC
Q 011973 53 NNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTI 109 (474)
Q Consensus 53 ~~~gHsNve~~P~~l~~~~p~Lkyli~TP~~H~lHHs~-~~~NYg~~f~lWDrLFGT~ 109 (474)
-.+.|.... .|.+.. .+.-.. ++.+|.+|..||.. +++|||....||+.+....
T Consensus 102 HkWsH~~~~-~P~~V~-~LQ~~g-illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~~ 156 (178)
T PF10520_consen 102 HKWSHTYKS-LPPWVR-FLQDAG-ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDKI 156 (178)
T ss_pred HHHHcCCCC-CCHHHH-HHHHCC-cccCchhhhccccCcccCCeEeecccchHHHHHh
Confidence 346688666 365422 111112 34699999999999 9999999999999987765
No 211
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=93.32 E-value=0.12 Score=49.19 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=28.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 4 ~~k~vlItGas~--gIG~~ia~~l~~~G~~vi~ 34 (248)
T TIGR01832 4 EGKVALVTGANT--GLGQGIAVGLAEAGADIVG 34 (248)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 347899999998 9999999999999999998
No 212
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=93.29 E-value=0.14 Score=53.52 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHcCCcEEEec-cccccccccccCceeeecCCCCcceeeecCChhHHHHHH---hcCc-CCCcEEEEe
Q 011973 230 INSLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVV---NSLP-KTTAHVLLR 304 (474)
Q Consensus 230 in~~Ie~Ai~~A~k~G~kV~~LG-~ln~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl---~~ip-~~~~~V~l~ 304 (474)
|=-+|-+|...|.+.|.-=--|. +|++ .+.+.|.-. -+.++-.|..=.++++. +..+ -..++|+|+
T Consensus 110 IlGQVK~Ay~~A~~~g~~g~~L~~lf~~--------A~~~aKrVR-teT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvI 180 (338)
T PRK00676 110 IQGQVKRAYLKAARERKLPFALHFLFQK--------ALKEGKVFR-SKGGAPYAEVTIESVVQQELRRRQKSKKASLLFI 180 (338)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEE
Confidence 44558899999999885311111 1122 223333322 22344334322222222 3332 257899999
Q ss_pred ccCCCchhHHHHHHHHhccCcE-EEe--cch
Q 011973 305 GTVTANKVANAVASSLCQMGIK-VAT--ICK 332 (474)
Q Consensus 305 Gatg~~kig~ava~~L~~~~v~-v~l--~~~ 332 (474)
|+ | ++|+-+|++|.++|++ +++ |+.
T Consensus 181 Ga-G--em~~l~a~~L~~~g~~~i~v~nRt~ 208 (338)
T PRK00676 181 GY-S--EINRKVAYYLQRQGYSRITFCSRQQ 208 (338)
T ss_pred cc-c--HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 99 5 9999999999999854 666 554
No 213
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=93.28 E-value=0.14 Score=49.88 Aligned_cols=43 Identities=16% Similarity=0.296 Sum_probs=36.3
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~ 343 (474)
..|+++|+++ -||+++|+.|+++|.+|.+ +++++++.+.+++.
T Consensus 2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~ 47 (267)
T TIGR02685 2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELN 47 (267)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHH
Confidence 4689999998 8999999999999999988 45677877776664
No 214
>PRK12743 oxidoreductase; Provisional
Probab=93.25 E-value=0.13 Score=49.58 Aligned_cols=43 Identities=12% Similarity=0.168 Sum_probs=35.8
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~ 343 (474)
+.|+++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++.
T Consensus 3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~ 48 (256)
T PRK12743 3 QVAIVTASDS--GIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVR 48 (256)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH
Confidence 5799999998 9999999999999999977 46666777666643
No 215
>PLN02427 UDP-apiose/xylose synthase
Probab=93.23 E-value=0.24 Score=51.21 Aligned_cols=44 Identities=16% Similarity=0.190 Sum_probs=34.1
Q ss_pred CcCCCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 011973 294 LPKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK 339 (474)
Q Consensus 294 ip~~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~~l~ 339 (474)
-|-+..+|+|+|+|| =||+.+++.|.++ |.+|.. |+.++.+.+.
T Consensus 10 ~~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~ 56 (386)
T PLN02427 10 KPIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALDVYNDKIKHLL 56 (386)
T ss_pred CcccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEecCchhhhhhh
Confidence 344566899999999 9999999999987 588876 5555555443
No 216
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.22 E-value=0.15 Score=49.88 Aligned_cols=46 Identities=17% Similarity=0.232 Sum_probs=36.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c---chhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---CKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~---~~~~~~~l~~~~~ 343 (474)
.+.++++|+++++-||+++|+.|+++|.+|.+ | ++++++++++++.
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~ 57 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE 57 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC
Confidence 46889999971127999999999999999998 3 3467888877764
No 217
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=93.21 E-value=0.14 Score=52.41 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=38.9
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~ 343 (474)
..+.++++|+.+++-||+|+|+.|++.|-+|.+ |+.++++.++.++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~ 55 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLR 55 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhh
Confidence 467899999931137999999999999999999 88899988876654
No 218
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=93.17 E-value=0.19 Score=50.25 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=32.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 338 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l 338 (474)
.+.|+|+|++| -||+++++.|.++|.+|.+ |+.++.+.+
T Consensus 5 ~k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (325)
T PLN02989 5 GKVVCVTGASG--YIASWIVKLLLFRGYTINATVRDPKDRKKT 45 (325)
T ss_pred CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCCcchhhH
Confidence 36899999999 9999999999999999876 666554443
No 219
>PRK08628 short chain dehydrogenase; Provisional
Probab=93.16 E-value=0.14 Score=49.23 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=34.7
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
...+.++++||+| -||+++|+.|+++|.+|.+ |++++. ++.++
T Consensus 5 l~~~~ilItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~ 49 (258)
T PRK08628 5 LKDKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE 49 (258)
T ss_pred cCCCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH
Confidence 3456899999998 9999999999999999988 666655 44444
No 220
>PRK06128 oxidoreductase; Provisional
Probab=93.11 E-value=0.19 Score=50.21 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=33.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~--~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+ ++ .++.+++.+++
T Consensus 55 ~k~vlITGas~--gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~ 101 (300)
T PRK06128 55 GRKALITGADS--GIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLI 101 (300)
T ss_pred CCEEEEecCCC--cHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHH
Confidence 46899999998 9999999999999999988 32 23445554443
No 221
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=93.06 E-value=0.19 Score=47.50 Aligned_cols=39 Identities=18% Similarity=0.333 Sum_probs=32.0
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+|.|+|+ | .+|+.||..+++.|.+|.+ ++++.+++.+++
T Consensus 1 ~V~ViGa-G--~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~ 41 (180)
T PF02737_consen 1 KVAVIGA-G--TMGRGIAALFARAGYEVTLYDRSPEALERARKR 41 (180)
T ss_dssp EEEEES--S--HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred CEEEEcC-C--HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence 5899999 5 9999999999999999999 777766655544
No 222
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.04 E-value=0.1 Score=52.75 Aligned_cols=88 Identities=15% Similarity=0.141 Sum_probs=55.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-------------cc---ccceeeec-cccc-
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-------------EA---QHNLVLST-SYAA- 358 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~-------------~~---~~~l~~~t-~~~~- 358 (474)
++|.|+|+- .+|+.+|..|++.|.+|++ ++++.++..++++.. +. ....+..+ ++++
T Consensus 6 ~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 82 (286)
T PRK07819 6 QRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF 82 (286)
T ss_pred cEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence 589999995 8999999999999999999 788877763322111 10 01112233 4544
Q ss_pred CceeEEE--EcCcCChh-----hhhcC--CCCceeecccc
Q 011973 359 HKTKIWL--VGDDLTGK-----EQARA--PKGTIFIPYTQ 389 (474)
Q Consensus 359 ~~~~vwi--vg~~i~~~-----eq~~a--~~G~~f~~~~~ 389 (474)
++++++| |-+.++-+ +..++ ++|++++.-+-
T Consensus 83 ~~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS 122 (286)
T PRK07819 83 ADRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS 122 (286)
T ss_pred CCCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 7787766 32322222 12233 88999887665
No 223
>PRK06179 short chain dehydrogenase; Provisional
Probab=93.03 E-value=0.12 Score=50.05 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=30.6
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 335 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~ 335 (474)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.
T Consensus 5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~ 41 (270)
T PRK06179 5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSRNPARA 41 (270)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 5799999998 9999999999999999998 665543
No 224
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.02 E-value=0.16 Score=48.87 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=33.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL 340 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~ 340 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++++
T Consensus 7 ~k~~lItGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~ 50 (255)
T PRK06463 7 GKVALITGGTR--GIGRAIAEAFLREGAKVAVLYNSAENEAKELRE 50 (255)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh
Confidence 46899999998 9999999999999999987 34455555654
No 225
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.01 E-value=0.16 Score=49.52 Aligned_cols=44 Identities=16% Similarity=0.137 Sum_probs=32.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~---~~~~~l~~~~ 342 (474)
+.++++|+++++-||+|+|+.|+++|.+|.+ |+. +..++++++.
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~ 57 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI 57 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc
Confidence 5789999995345999999999999999988 552 2344454443
No 226
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.00 E-value=0.24 Score=51.15 Aligned_cols=80 Identities=20% Similarity=0.202 Sum_probs=55.8
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
|++.|++=+ +-.-++|.++|..+ -+|+.+|..|.++|..|++ +... +.++
T Consensus 142 Tp~aii~lL~~~~i~l~Gk~V~vIG~s~--ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l~e 198 (301)
T PRK14194 142 TPSGCLRLLEDTCGDLTGKHAVVIGRSN--IVGKPMAALLLQAHCSVTVVHSRST---------------------DAKA 198 (301)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEECCCCC---------------------CHHH
Confidence 566666544 34688999999998 9999999999999999999 2111 1111
Q ss_pred --CceeEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 011973 359 --HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 --~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+.++|+| +|+ .++++ ++++|+++||++ +++
T Consensus 199 ~~~~ADIVIsavg~~~~v~~~---~ik~GaiVIDvg-in~ 234 (301)
T PRK14194 199 LCRQADIVVAAVGRPRLIDAD---WLKPGAVVIDVG-INR 234 (301)
T ss_pred HHhcCCEEEEecCChhcccHh---hccCCcEEEEec-ccc
Confidence 3444544 444 34433 469999999999 554
No 227
>PRK12937 short chain dehydrogenase; Provisional
Probab=92.93 E-value=0.16 Score=48.11 Aligned_cols=43 Identities=21% Similarity=0.297 Sum_probs=34.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|+++|.++++ + +.++.+++.+++
T Consensus 5 ~~~vlItG~~~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12937 5 NKVAIVTGASR--GIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI 50 (245)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999877 3 344455555543
No 228
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.92 E-value=0.16 Score=48.12 Aligned_cols=44 Identities=20% Similarity=0.295 Sum_probs=37.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++++.+.+++.
T Consensus 5 ~~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~ 50 (253)
T PRK08217 5 DKVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECG 50 (253)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 45799999998 9999999999999999888 88888777766643
No 229
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.92 E-value=0.21 Score=51.13 Aligned_cols=89 Identities=28% Similarity=0.301 Sum_probs=59.8
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|+..|++=+ +-.-++|+|+|.++ -||+-+|..|.++|..|++ .++. . ++++
T Consensus 141 Tp~aii~lL~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVt~~hs~t--~------------------~l~~~ 198 (285)
T PRK14189 141 TPYGVMKMLESIGIPLRGAHAVVIGRSN--IVGKPMAMLLLQAGATVTICHSKT--R------------------DLAAH 198 (285)
T ss_pred CHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEecCCC--C------------------CHHHH
Confidence 566665543 44688999999997 8899999999999999998 1110 0 1111
Q ss_pred -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973 359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 400 (474)
Q Consensus 359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~ 400 (474)
+.+|++| +| ..++++. .++|+++||+. +++. ++--|+-
T Consensus 199 ~~~ADIVV~avG~~~~i~~~~---ik~gavVIDVG-in~~~~gkl~GDVd 244 (285)
T PRK14189 199 TRQADIVVAAVGKRNVLTADM---VKPGATVIDVG-MNRDDAGKLCGDVD 244 (285)
T ss_pred hhhCCEEEEcCCCcCccCHHH---cCCCCEEEEcc-ccccCCCCeeCCcc
Confidence 3455555 33 2456544 49999999998 6652 3445554
No 230
>PLN02214 cinnamoyl-CoA reductase
Probab=92.91 E-value=0.23 Score=50.76 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=30.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 334 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~ 334 (474)
.++|+|+|++| -||+++++.|.++|.+|.. |+.++
T Consensus 10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 46799999999 9999999999999999987 66554
No 231
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=92.88 E-value=0.094 Score=51.33 Aligned_cols=101 Identities=19% Similarity=0.195 Sum_probs=64.3
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCceeEEEEcCcCChhhhhc
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR 377 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwivg~~i~~~eq~~ 377 (474)
.|+|+|+|| -||++++++|.++|.+|.. |+.+....+. .-..|+.++..+.+....
T Consensus 2 ~ILVtG~tG--fiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------------~~~~~~~~d~~~~~~~~~ 59 (314)
T COG0451 2 RILVTGGAG--FIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------------------SGVEFVVLDLTDRDLVDE 59 (314)
T ss_pred eEEEEcCcc--cHHHHHHHHHHhCCCeEEEEeCCCccccccc--------------------cccceeeecccchHHHHH
Confidence 399999999 9999999999999999998 3232111110 001355555555533322
Q ss_pred CCCCceeecccccCccCCCCCeeeecCCccccCCCCcc----ccccccccCcchhHHHHHhhh
Q 011973 378 APKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSN----MHSCENWLGRRVMSAWRIAGI 436 (474)
Q Consensus 378 a~~G~~f~~~~~v~p~~~R~dc~y~~~~am~vP~~~~~----~~~~e~~~prr~~~Ac~a~~~ 436 (474)
+..+ .+ |+.++-......+....+ +..-|....++++.||.++++
T Consensus 60 ~~~~-------------~~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~ 108 (314)
T COG0451 60 LAKG-------------VP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV 108 (314)
T ss_pred HHhc-------------CC-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2222 11 777777777766665432 445677788888888888544
No 232
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=92.85 E-value=0.19 Score=53.62 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=59.4
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc---c--CceeEEE--EcC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA---A--HKTKIWL--VGD 368 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~---~--~~~~vwi--vg~ 368 (474)
..|++.|+ | .||+++|..|++++ .+|++ |+.+...+++.....+.+-..+.....+ + ++.+++| +.-
T Consensus 2 ~~ilviGa-G--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 2 MKILVIGA-G--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CcEEEECC-c--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 47899999 7 89999999999888 88888 9999999998875443322222333222 2 5556666 222
Q ss_pred cCChhh-hhcCCCCceeecccc
Q 011973 369 DLTGKE-QARAPKGTIFIPYTQ 389 (474)
Q Consensus 369 ~i~~~e-q~~a~~G~~f~~~~~ 389 (474)
.++..= +.=++.|++++|.|-
T Consensus 79 ~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 79 FVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred hhhHHHHHHHHHhCCCEEEccc
Confidence 222221 124578999999995
No 233
>PRK12747 short chain dehydrogenase; Provisional
Probab=92.85 E-value=0.16 Score=48.74 Aligned_cols=43 Identities=26% Similarity=0.292 Sum_probs=35.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
.+.++++|++| -||+++|+.|++.|.+|.+ +++++.+++..++
T Consensus 4 ~k~~lItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 49 (252)
T PRK12747 4 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI 49 (252)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence 36899999998 9999999999999999987 4556666665554
No 234
>PRK07041 short chain dehydrogenase; Provisional
Probab=92.84 E-value=0.14 Score=48.21 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=34.7
Q ss_pred EEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 302 LLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 302 ~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+++|++| -||+++|+.|+++|.+|++ |+.++.+.+.+++.
T Consensus 1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 42 (230)
T PRK07041 1 LVVGGSS--GIGLALARAFAAEGARVTIASRSRDRLAAAARALG 42 (230)
T ss_pred CeecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 4789998 9999999999999999988 88888887776654
No 235
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.84 E-value=0.66 Score=47.77 Aligned_cols=140 Identities=15% Similarity=0.211 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCcE--EEecccccc-------ccccccC---ceeeec-CCCCcce----------eeecCC
Q 011973 227 REAINSLIEEAILEADAKGVKV--ISLGLLNQG-------EELNRNG---EIYLER-QPNKLKI----------KVVDGS 283 (474)
Q Consensus 227 ~~~in~~Ie~Ai~~A~k~G~kV--~~LG~ln~~-------e~ln~~g---~l~v~k-~p~~L~i----------rvv~Gn 283 (474)
..+-+.-+....+.|++.|++. +-|-.-.+. +++|.|- ++.++. -|.+++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 121 (293)
T PRK14185 42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121 (293)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence 3445555677788999999998 556554432 3677764 333332 1333432 123333
Q ss_pred h----------------hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 011973 284 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK 337 (474)
Q Consensus 284 s----------------ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~----~v~v~l-~~~~~~~~ 337 (474)
+ -|++.|++=+ +-.-++|+|+|... -||+-+|..|.++ +..|++ .++-
T Consensus 122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T---- 195 (293)
T PRK14185 122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSN--IVGKPMAQLMMQKAYPGDCTVTVCHSRS---- 195 (293)
T ss_pred CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHcCCCCCCCEEEEecCCC----
Confidence 2 1677766644 44578999999998 9999999999987 678887 2111
Q ss_pred HHhhCccccccceeeeccccc--CceeEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 011973 338 LKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 338 l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
.++++ +.++|+| +|+ .++++.. ++|+++||+. +.+
T Consensus 196 ----------------~nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~ 236 (293)
T PRK14185 196 ----------------KNLKKECLEADIIIAALGQPEFVKADMV---KEGAVVIDVG-TTR 236 (293)
T ss_pred ----------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 01121 4566666 443 4666555 9999999998 655
No 236
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=92.80 E-value=0.14 Score=49.87 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=27.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~ 37 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGI 37 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence 46789999973247999999999999999987
No 237
>PRK06123 short chain dehydrogenase; Provisional
Probab=92.75 E-value=0.18 Score=47.97 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=33.8
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
+.++|+|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++
T Consensus 3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l 47 (248)
T PRK06123 3 KVMIITGASR--GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI 47 (248)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH
Confidence 4789999998 9999999999999988877 4555666655554
No 238
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=92.69 E-value=0.14 Score=53.37 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=34.6
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 337 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~ 337 (474)
+.+.|+|+||+| =||+.|+..|-++|..|.- |++++-++
T Consensus 5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~gtVR~~~~~k~ 45 (327)
T KOG1502|consen 5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRGTVRDPEDEKK 45 (327)
T ss_pred CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEEEEcCcchhhh
Confidence 578999999999 9999999999999999987 88887443
No 239
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=92.69 E-value=0.17 Score=48.82 Aligned_cols=44 Identities=18% Similarity=0.190 Sum_probs=35.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 342 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~ 342 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ | +++..+.+.+++
T Consensus 6 ~~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l 52 (261)
T PRK08936 6 EGKVVVITGGST--GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI 52 (261)
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999987 4 445555555554
No 240
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.55 E-value=0.21 Score=49.20 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=27.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.++++|+++|.-||+|+|+.|+++|.+|.+
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil 37 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHREGAELAF 37 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEE
Confidence 35789999984346999999999999999988
No 241
>PRK07985 oxidoreductase; Provisional
Probab=92.51 E-value=0.19 Score=50.21 Aligned_cols=43 Identities=23% Similarity=0.320 Sum_probs=34.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~--~~~~~~l~~~~ 342 (474)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |+ .++.+++++.+
T Consensus 49 ~k~vlITGas~--gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~ 95 (294)
T PRK07985 49 DRKALVTGGDS--GIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKII 95 (294)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHH
Confidence 36899999998 9999999999999999988 32 34556665443
No 242
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=92.50 E-value=0.18 Score=47.93 Aligned_cols=44 Identities=23% Similarity=0.307 Sum_probs=36.1
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~ 343 (474)
.+.++++|++| -||+++|+.|.++|.+|++ |++++.+++.+++.
T Consensus 6 ~~~~lItG~s~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~ 52 (247)
T PRK12935 6 GKVAIVTGGAK--GIGKAITVALAQEGAKVVINYNSSKEAAENLVNELG 52 (247)
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHH
Confidence 46899999998 9999999999999999987 45667766655543
No 243
>PRK06484 short chain dehydrogenase; Validated
Probab=92.49 E-value=0.22 Score=53.41 Aligned_cols=47 Identities=13% Similarity=0.159 Sum_probs=41.0
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE 345 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~ 345 (474)
..+.|+|+|+++ -||+++|+.|.++|.+|.+ |+.++++++.+++..+
T Consensus 4 ~~k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~ 52 (520)
T PRK06484 4 QSRVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSLGPD 52 (520)
T ss_pred CCeEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCc
Confidence 346899999997 9999999999999999988 8999999988887543
No 244
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.47 E-value=0.24 Score=49.66 Aligned_cols=92 Identities=17% Similarity=0.233 Sum_probs=59.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-----------------ccceeeecccc-c
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-----------------QHNLVLSTSYA-A 358 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~-----------------~~~l~~~t~~~-~ 358 (474)
++|.++|+- .+|+++|..|++.|.+|++ +++++++++++++.... ..++...++++ +
T Consensus 2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 479999995 9999999999999999999 88888888765421100 01111122554 3
Q ss_pred -CceeEEE--EcCcCChh-----h-hhcCCCCcee-ecccccCcc
Q 011973 359 -HKTKIWL--VGDDLTGK-----E-QARAPKGTIF-IPYTQIPPR 393 (474)
Q Consensus 359 -~~~~vwi--vg~~i~~~-----e-q~~a~~G~~f-~~~~~v~p~ 393 (474)
++++++| +.+..+-+ + ...+++|+++ ++-|-++|.
T Consensus 79 ~~~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~~~~ 123 (288)
T PRK09260 79 VADADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMSPT 123 (288)
T ss_pred hcCCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCCHH
Confidence 7777765 33322211 1 1246889866 677778877
No 245
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.44 E-value=0.23 Score=46.81 Aligned_cols=43 Identities=23% Similarity=0.318 Sum_probs=35.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
.+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 5 ~~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 50 (247)
T PRK05565 5 GKVAIVTGASG--GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI 50 (247)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 35799999998 9999999999999999877 5566666665553
No 246
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.42 E-value=0.22 Score=48.51 Aligned_cols=47 Identities=23% Similarity=0.345 Sum_probs=36.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~--~~~~~l~~~~~~ 344 (474)
.+.|+++|+++++-||+++|+.|+++|.+|.+ |++ +..++++++++.
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~ 57 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE 57 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC
Confidence 35799999931148999999999999999998 443 556777777654
No 247
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=92.38 E-value=0.19 Score=48.25 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=33.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |++ ..+++.+++
T Consensus 8 ~k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~ 51 (260)
T PRK12823 8 GKVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDRSE-LVHEVAAEL 51 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHH
Confidence 46899999998 9999999999999999988 553 344555544
No 248
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=92.36 E-value=0.93 Score=44.68 Aligned_cols=29 Identities=31% Similarity=0.405 Sum_probs=26.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEE
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA 328 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~ 328 (474)
..++|++.| .| +||+.+|+.|.+.|.+|+
T Consensus 30 ~~~~v~I~G-~G--~VG~~~a~~L~~~g~~vv 58 (227)
T cd01076 30 AGARVAIQG-FG--NVGSHAARFLHEAGAKVV 58 (227)
T ss_pred cCCEEEEEC-CC--HHHHHHHHHHHHCCCEEE
Confidence 468999999 46 999999999999999999
No 249
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.34 E-value=0.82 Score=48.16 Aligned_cols=44 Identities=20% Similarity=0.221 Sum_probs=38.9
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
...++|+++|. | ++|+.+++.|.+.|.++++ +++++.+.++++.
T Consensus 229 ~~~~~iiIiG~-G--~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~ 274 (453)
T PRK09496 229 KPVKRVMIVGG-G--NIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL 274 (453)
T ss_pred CCCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence 35789999999 5 9999999999999999988 8888899888864
No 250
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=92.33 E-value=0.21 Score=47.27 Aligned_cols=42 Identities=26% Similarity=0.196 Sum_probs=34.5
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
+.|+++|++| -||+++++.|.++|.+|.+ |+.++.+++.+++
T Consensus 2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 46 (247)
T PRK09730 2 AIALVTGGSR--GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLI 46 (247)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence 4689999998 9999999999999999865 6666666665553
No 251
>PRK06483 dihydromonapterin reductase; Provisional
Probab=92.32 E-value=0.23 Score=47.10 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=30.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 334 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~ 334 (474)
.+.|+++|++| -||+++|+.|+++|.+|++ |++++
T Consensus 2 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQ--RIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 35799999998 9999999999999999988 65543
No 252
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.29 E-value=0.24 Score=50.77 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=67.6
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhc--cCcEEEe-cchhhHHHHHhhCccccccceeeecccc
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYA 357 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~--~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~ 357 (474)
|+..|++=+ +-.-++|+|+|.+. -||+-+|..|.+ ++..|++ .++- .+++
T Consensus 141 Tp~av~~ll~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~~~atVtvchs~T--------------------~~l~ 198 (284)
T PRK14193 141 TPRGIVHLLRRYDVELAGAHVVVIGRGV--TVGRPIGLLLTRRSENATVTLCHTGT--------------------RDLA 198 (284)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHhhccCCCEEEEeCCCC--------------------CCHH
Confidence 666666544 44678999999998 999999999997 7888888 2211 0112
Q ss_pred c--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCee----eecCCccccCCCCc
Q 011973 358 A--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF----YHSTPAMIIPPSLS 414 (474)
Q Consensus 358 ~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~----y~~~~am~vP~~~~ 414 (474)
+ +.+||+| +| +.++++.. ++|+++||+. +++. ++--|+- ..-...+.||+.+-
T Consensus 199 ~~~k~ADIvV~AvGkp~~i~~~~i---k~GavVIDvG-in~~~~gkl~GDvd~~v~~~a~~iTPVPGGVG 264 (284)
T PRK14193 199 AHTRRADIIVAAAGVAHLVTADMV---KPGAAVLDVG-VSRAGDGKLVGDVHPDVWEVAGAVSPNPGGVG 264 (284)
T ss_pred HHHHhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-ccccCCCcEEeecCHhHHhhCCEEeCCCCChh
Confidence 1 3556655 34 35777777 9999999998 6662 3334444 22223355777654
No 253
>PLN02494 adenosylhomocysteinase
Probab=92.24 E-value=1.4 Score=48.29 Aligned_cols=156 Identities=15% Similarity=0.143 Sum_probs=96.5
Q ss_pred eeeecCChhHHHHHHhcCcC--CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 011973 277 IKVVDGSSLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 352 (474)
Q Consensus 277 irvv~GnsltaAvvl~~ip~--~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~ 352 (474)
-|.=||.|. .-.+++.... .-++|.|+|.- .||+.+|+.|...|.+|+. ++..+...-... +.+. +
T Consensus 232 n~yGtgqS~-~d~i~r~t~i~LaGKtVvViGyG---~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~-G~~v----v- 301 (477)
T PLN02494 232 NLYGCRHSL-PDGLMRATDVMIAGKVAVICGYG---DVGKGCAAAMKAAGARVIVTEIDPICALQALME-GYQV----L- 301 (477)
T ss_pred ccccccccH-HHHHHHhcCCccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhc-CCee----c-
Confidence 466667775 3334444332 56789999987 8999999999999999998 444432221111 1110 1
Q ss_pred ecccc-c-CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---------------CCCCCeeeecCC----cc
Q 011973 353 STSYA-A-HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---------------KLRKDCFYHSTP----AM 407 (474)
Q Consensus 353 ~t~~~-~-~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---------------~~R~dc~y~~~~----am 407 (474)
+.+ . +.++++| .| ..+..+....+++|++++-+.++.+. +.|..+..-+.+ .+
T Consensus 302 --~leEal~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i 379 (477)
T PLN02494 302 --TLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGI 379 (477)
T ss_pred --cHHHHHhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEE
Confidence 222 2 4566666 33 23578899999999999999985422 222222211111 12
Q ss_pred c--cCCCCccccccccccCcchhHHHHHhhhhhhhcCCCC
Q 011973 408 I--IPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 445 (474)
Q Consensus 408 ~--vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~ 445 (474)
. --+.+-|+- |-.+.|..+|.--++--.+-..|-|..
T Consensus 380 ~ll~eGrlvNl~-~~~GhP~evmd~sFa~Q~la~~~l~~~ 418 (477)
T PLN02494 380 IVLAEGRLMNLG-CATGHPSFVMSCSFTNQVIAQLELWNE 418 (477)
T ss_pred EEEeCCcccccc-CCCCCCcceeeHHHHHHHHHHHHHHhc
Confidence 1 222466677 889999999999887766666666654
No 254
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=92.22 E-value=0.22 Score=51.79 Aligned_cols=85 Identities=15% Similarity=0.200 Sum_probs=50.4
Q ss_pred EEEeccCCCchhHHHHHHHHhccC-c-EEEe--cchhhHHHHHhhCcccc-ccceeeecccc---c--CceeEEE--EcC
Q 011973 301 VLLRGTVTANKVANAVASSLCQMG-I-KVAT--ICKDDYEKLKLRIPVEA-QHNLVLSTSYA---A--HKTKIWL--VGD 368 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~-v-~v~l--~~~~~~~~l~~~~~~~~-~~~l~~~t~~~---~--~~~~vwi--vg~ 368 (474)
|++.|+ | .+|+++|+.|.++. . ++++ ||.++++++.+++.... +...+.+++.+ + +.++++| +|.
T Consensus 1 IlvlG~-G--~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-G--RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---S--HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-c--HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 689999 9 99999999999776 4 7888 99999999988752222 11112333322 2 7778877 444
Q ss_pred cCChhhhh-cCCCCceeeccc
Q 011973 369 DLTGKEQA-RAPKGTIFIPYT 388 (474)
Q Consensus 369 ~i~~~eq~-~a~~G~~f~~~~ 388 (474)
...+.=.+ =+..|++++|.+
T Consensus 78 ~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 78 FFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp GGHHHHHHHHHHHT-EEEESS
T ss_pred chhHHHHHHHHHhCCCeeccc
Confidence 42221111 124588888855
No 255
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=92.14 E-value=0.2 Score=48.49 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=28.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
..+.|+++|+++ -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~~lItGas~--gIG~aia~~l~~~G~~vv~ 37 (251)
T PRK12481 7 NGKVAIITGCNT--GLGQGMAIGLAKAGADIVG 37 (251)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 347899999997 9999999999999999998
No 256
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.13 E-value=0.26 Score=48.65 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=35.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~---~~~~~~l~~~~~ 343 (474)
.+.|+++|+++++-||+++|+.|+++|.+|.+ |+ .++++++++++.
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~ 60 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG 60 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence 36799999972137999999999999999988 54 356666766653
No 257
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=92.08 E-value=0.13 Score=50.55 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=29.2
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 334 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~ 334 (474)
.|+|+|||| .||+.+++.|.++|.+|.. |+.++
T Consensus 1 ~ilVtGatG--~iG~~vv~~L~~~g~~V~~~~R~~~~ 35 (285)
T TIGR03649 1 TILLTGGTG--KTASRIARLLQAASVPFLVASRSSSS 35 (285)
T ss_pred CEEEEcCCC--hHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 389999999 9999999999999998888 77654
No 258
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=92.05 E-value=0.35 Score=49.46 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=28.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
..++|+|+|+|| =||+.+++.|.++|.+|+.
T Consensus 14 ~~~~vlVtGatG--fiG~~lv~~L~~~g~~V~~ 44 (348)
T PRK15181 14 APKRWLITGVAG--FIGSGLLEELLFLNQTVIG 44 (348)
T ss_pred cCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 457899999999 9999999999999999876
No 259
>PRK06720 hypothetical protein; Provisional
Probab=92.03 E-value=0.27 Score=46.03 Aligned_cols=44 Identities=18% Similarity=0.168 Sum_probs=36.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
..+.++++|+++ -||+++|+.|+++|.+|.+ |+.+..+...+++
T Consensus 15 ~gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l 60 (169)
T PRK06720 15 AGKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60 (169)
T ss_pred CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 456889999997 8999999999999999988 6676666665554
No 260
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=91.97 E-value=0.26 Score=45.82 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=59.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccc----ee-----------eeccccc--
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN----LV-----------LSTSYAA-- 358 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~----l~-----------~~t~~~~-- 358 (474)
.++|+|+|+- .+|...++.|.+.|.+|+. .+.++.++++.......... .. +..+|++
T Consensus 20 p~~vvv~G~G---~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 20 PAKVVVTGAG---RVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp T-EEEEESTS---HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CeEEEEECCC---HHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 4788999965 9999999999999999999 55556666554422211110 00 0122321
Q ss_pred ----CceeEEE---------EcCcCChhhhhcCCCCceeecccccCcc
Q 011973 359 ----HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR 393 (474)
Q Consensus 359 ----~~~~vwi---------vg~~i~~~eq~~a~~G~~f~~~~~v~p~ 393 (474)
+.++++| .-..++.++.++++||.+++|+| .+.-
T Consensus 97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis-~D~g 143 (168)
T PF01262_consen 97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS-CDQG 143 (168)
T ss_dssp HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT-GGGT
T ss_pred HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE-ecCC
Confidence 5556766 33578999999999999999999 6554
No 261
>PRK06114 short chain dehydrogenase; Provisional
Probab=91.96 E-value=0.28 Score=47.27 Aligned_cols=44 Identities=20% Similarity=0.279 Sum_probs=34.9
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 342 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~ 342 (474)
..+.++++|++| -||+++|+.|+++|.+|.+ |+. +.++++.+++
T Consensus 7 ~~k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l 53 (254)
T PRK06114 7 DGQVAFVTGAGS--GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI 53 (254)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 356899999998 9999999999999999998 543 3455555544
No 262
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.95 E-value=0.26 Score=47.84 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=32.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+++|+++++-||+++|+.|+++|.+|.+ |+ ++.++..+++
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~ 52 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKL 52 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhh
Confidence 46799999982127999999999999999998 65 3444433343
No 263
>PRK06198 short chain dehydrogenase; Provisional
Probab=91.94 E-value=0.23 Score=47.66 Aligned_cols=43 Identities=14% Similarity=0.191 Sum_probs=35.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l--~~~~~~~~l~~~~ 342 (474)
.+.|+++|++| -||+++|+.|+++|.+ |.+ |+.++.+.+.+++
T Consensus 6 ~k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l 51 (260)
T PRK06198 6 GKVALVTGGTQ--GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL 51 (260)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence 46799999998 8999999999999999 777 7777666555544
No 264
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.92 E-value=0.33 Score=49.74 Aligned_cols=92 Identities=20% Similarity=0.214 Sum_probs=61.0
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|++.|++=+ +-.-++|+|+|... -||+-+|..|.++|-.|++ .++. ++|++. +
T Consensus 139 cTp~avi~lL~~~~i~l~Gk~vvVvGrs~--~VG~Pla~lL~~~gAtVtv~hs~t--~~l~~~---------~------- 198 (285)
T PRK14191 139 ATPMGVMRLLKHYHIEIKGKDVVIIGASN--IVGKPLAMLMLNAGASVSVCHILT--KDLSFY---------T------- 198 (285)
T ss_pred CcHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCEEEEEeCCc--HHHHHH---------H-------
Confidence 3666666544 44678999999997 9999999999999999998 2111 011100 0
Q ss_pred CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973 359 HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 400 (474)
Q Consensus 359 ~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~ 400 (474)
+.++|+| +| +.++++.. ++|+++||+. +++. ++--|+-
T Consensus 199 ~~ADIvV~AvG~p~~i~~~~v---k~GavVIDvG-i~~~~~gklvGDvd 243 (285)
T PRK14191 199 QNADIVCVGVGKPDLIKASMV---KKGAVVVDIG-INRLNDGRLVGDVD 243 (285)
T ss_pred HhCCEEEEecCCCCcCCHHHc---CCCcEEEEee-cccccCCceecccc
Confidence 2455555 33 34666655 9999999998 6552 3445554
No 265
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=91.92 E-value=1 Score=43.41 Aligned_cols=84 Identities=13% Similarity=0.151 Sum_probs=58.2
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCceeEEE---EcCcCC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT 371 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwi---vg~~i~ 371 (474)
..++|.+.|.- ++|+++|+.|.+.|.+|+. ++.++.+.+++++... .+.....-..+++|.+ .+..|+
T Consensus 27 ~gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~----~v~~~~l~~~~~Dv~vp~A~~~~I~ 99 (200)
T cd01075 27 EGKTVAVQGLG---KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT----VVAPEEIYSVDADVFAPCALGGVIN 99 (200)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE----EEcchhhccccCCEEEecccccccC
Confidence 45789999994 8999999999999999999 7778888887765211 1211111114677766 567889
Q ss_pred hhhhhcCCCCceeeccc
Q 011973 372 GKEQARAPKGTIFIPYT 388 (474)
Q Consensus 372 ~~eq~~a~~G~~f~~~~ 388 (474)
.+...+++.. .++.-+
T Consensus 100 ~~~~~~l~~~-~v~~~A 115 (200)
T cd01075 100 DDTIPQLKAK-AIAGAA 115 (200)
T ss_pred HHHHHHcCCC-EEEECC
Confidence 8888777644 344443
No 266
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.90 E-value=0.31 Score=49.98 Aligned_cols=81 Identities=15% Similarity=0.179 Sum_probs=58.4
Q ss_pred HHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|++.|++=+. -.-++|+++|.+. -||+-+|..|.++|..|++ .++- .++++
T Consensus 140 Tp~avi~lL~~~~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVtichs~T--------------------~~l~~~ 197 (284)
T PRK14170 140 TPAGIIELIKSTGTQIEGKRAVVIGRSN--IVGKPVAQLLLNENATVTIAHSRT--------------------KDLPQV 197 (284)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------------------CCHHHH
Confidence 6666665443 3688999999998 9999999999999999998 2111 01121
Q ss_pred -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+++||+| +| ..++++.. ++|+++||+. ++.
T Consensus 198 ~~~ADIvI~AvG~~~~i~~~~v---k~GavVIDvG-in~ 232 (284)
T PRK14170 198 AKEADILVVATGLAKFVKKDYI---KPGAIVIDVG-MDR 232 (284)
T ss_pred HhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence 3566656 33 35777766 8999999998 665
No 267
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.89 E-value=0.27 Score=50.60 Aligned_cols=81 Identities=20% Similarity=0.165 Sum_probs=58.9
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|++.|++=+ +-.-++|+|+|.+. -||+-+|..|.++|-.|++ .++- .++++
T Consensus 143 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVt~chs~T--------------------~~l~~~ 200 (294)
T PRK14187 143 TPKGCLYLIKTITRNLSGSDAVVIGRSN--IVGKPMACLLLGENCTVTTVHSAT--------------------RDLADY 200 (294)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhhCCCEEEEeCCCC--------------------CCHHHH
Confidence 777766544 44688999999998 9999999999999999998 2111 01121
Q ss_pred -CceeEEE--EcCc--CChhhhhcCCCCceeecccccCc
Q 011973 359 -HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 -~~~~vwi--vg~~--i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+.+||+| +|+- ++++.. ++|+++||+- +++
T Consensus 201 ~~~ADIvVsAvGkp~~i~~~~i---k~gaiVIDVG-in~ 235 (294)
T PRK14187 201 CSKADILVAAVGIPNFVKYSWI---KKGAIVIDVG-INS 235 (294)
T ss_pred HhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 3556655 5544 777777 8999999996 554
No 268
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=91.87 E-value=0.2 Score=50.61 Aligned_cols=102 Identities=16% Similarity=0.176 Sum_probs=68.6
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcCc----
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD---- 369 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~~---- 369 (474)
+|.++|.- .+|.++|+.|.+.|.+|.+ |++++.++++++- . ...++.+ . ++++++| +-+.
T Consensus 3 ~Ig~IGlG---~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-----~--~~~~s~~~~~~~aDvVi~~vp~~~~~~ 72 (296)
T PRK15461 3 AIAFIGLG---QMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-----A--TPAASPAQAAAGAEFVITMLPNGDLVR 72 (296)
T ss_pred eEEEEeeC---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-----C--cccCCHHHHHhcCCEEEEecCCHHHHH
Confidence 68889866 9999999999999999988 8888888887651 0 1122332 2 5555544 2111
Q ss_pred --CChh-h-hhcCCCCceeecccccCccCC--------CCCeeeecCCccccCC
Q 011973 370 --LTGK-E-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMIIPP 411 (474)
Q Consensus 370 --i~~~-e-q~~a~~G~~f~~~~~v~p~~~--------R~dc~y~~~~am~vP~ 411 (474)
+... . ...+++|+++++.|.++|... .+.+.|.+.|.+..|.
T Consensus 73 ~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~ 126 (296)
T PRK15461 73 SVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSD 126 (296)
T ss_pred HHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHH
Confidence 1111 1 123589999999999988722 1567788888877665
No 269
>PRK07577 short chain dehydrogenase; Provisional
Probab=91.86 E-value=0.19 Score=47.29 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=29.5
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 333 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~ 333 (474)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.+
T Consensus 4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999998 9999999999999999988 5544
No 270
>PRK07856 short chain dehydrogenase; Provisional
Probab=91.85 E-value=0.21 Score=48.06 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=31.3
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 334 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~ 334 (474)
..+.++++|++| -||+++|+.|+++|.+|++ |+.++
T Consensus 5 ~~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 357899999998 9999999999999999998 65543
No 271
>PLN02686 cinnamoyl-CoA reductase
Probab=91.85 E-value=0.27 Score=51.01 Aligned_cols=42 Identities=26% Similarity=0.321 Sum_probs=35.1
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 339 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~ 339 (474)
...+.|+|+|++| -||+++++.|.++|.+|.+ |+.++.+.++
T Consensus 51 ~~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVS--FLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4567899999999 9999999999999999875 7766665553
No 272
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.80 E-value=0.29 Score=46.76 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=32.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLR 341 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~-~~~~~~l~~~ 341 (474)
+.|+++|++| -||+++|+.|+++|.+|.+ |+ .+..+++.++
T Consensus 3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~ 46 (256)
T PRK12745 3 PVALVTGGRR--GIGLGIARALAAAGFDLAINDRPDDEELAATQQE 46 (256)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Confidence 5799999998 9999999999999999888 43 3444444333
No 273
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=91.80 E-value=0.33 Score=54.86 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=38.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 414 gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~ 459 (676)
T TIGR02632 414 RRVAFVTGGAG--GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN 459 (676)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence 57899999998 9999999999999999988 88888887776654
No 274
>PRK05855 short chain dehydrogenase; Validated
Probab=91.72 E-value=0.25 Score=52.77 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=39.3
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+...++|+|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 314 ~~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 360 (582)
T PRK05855 314 SGKLVVVTGAGS--GIGRETALAFAREGAEVVASDIDEAAAERTAELIR 360 (582)
T ss_pred CCCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 356899999998 9999999999999999988 88888888877653
No 275
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=91.69 E-value=0.21 Score=47.29 Aligned_cols=40 Identities=25% Similarity=0.394 Sum_probs=32.1
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 342 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~ 342 (474)
|+++|++| -||+++|+.|+++|.+|.+ ++.++.+.+.+++
T Consensus 1 vlItGas~--giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l 43 (239)
T TIGR01831 1 VLVTGASR--GIGRAIANRLAADGFEICVHYHSGRSDAESVVSAI 43 (239)
T ss_pred CEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 58999998 9999999999999999877 3445566665554
No 276
>PRK08226 short chain dehydrogenase; Provisional
Probab=91.65 E-value=0.33 Score=46.74 Aligned_cols=34 Identities=15% Similarity=0.367 Sum_probs=30.1
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 333 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~ 333 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 6 ~~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~~~ 41 (263)
T PRK08226 6 GKTALITGALQ--GIGEGIARVFARHGANLILLDISPE 41 (263)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHH
Confidence 46899999998 9999999999999999998 5543
No 277
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=91.65 E-value=0.29 Score=49.35 Aligned_cols=45 Identities=20% Similarity=0.279 Sum_probs=39.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+.++++|++. -||+|+|+.|++.|-+|.+ |+++++++.++++.
T Consensus 7 ~gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~ 53 (270)
T KOG0725|consen 7 AGKVALVTGGSS--GIGKAIALLLAKAGAKVVITGRSEERLEETAQELG 53 (270)
T ss_pred CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 356788999996 8999999999999999999 99999888877733
No 278
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.65 E-value=0.31 Score=49.03 Aligned_cols=45 Identities=18% Similarity=0.235 Sum_probs=36.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~~~ 343 (474)
+.+.++|+|++| -||+++|+.|+++|.+|.+ + +.++.+++.+++.
T Consensus 11 ~~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~ 58 (306)
T PRK07792 11 SGKVAVVTGAAA--GLGRAEALGLARLGATVVVNDVASALDASDVLDEIR 58 (306)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHH
Confidence 456899999998 9999999999999999998 3 3455666666543
No 279
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=91.63 E-value=0.25 Score=47.64 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=29.2
Q ss_pred cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
....+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 7 ~l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~ 39 (253)
T PRK08993 7 SLEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVG 39 (253)
T ss_pred CCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 33456899999998 9999999999999999987
No 280
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=91.58 E-value=1.7 Score=42.48 Aligned_cols=87 Identities=14% Similarity=0.132 Sum_probs=58.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCceeEEE--EcCcCChh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VGDDLTGK 373 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~~~~vwi--vg~~i~~~ 373 (474)
...|++.|++| .+|.++++.+...|.++.. +++++.+.+++ ++... .+...........++++ +|.....+
T Consensus 133 ~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~--~~~~~~~~~~~~~d~vl~~~g~~~~~~ 207 (305)
T cd08270 133 GRRVLVTGASG--GVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAE--VVVGGSELSGAPVDLVVDSVGGPQLAR 207 (305)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE--EEeccccccCCCceEEEECCCcHHHHH
Confidence 67999999998 9999999999999999877 77888888876 44321 11100011113456666 44434455
Q ss_pred hhhcCCCCceeecccc
Q 011973 374 EQARAPKGTIFIPYTQ 389 (474)
Q Consensus 374 eq~~a~~G~~f~~~~~ 389 (474)
-.+.++++-+++.+..
T Consensus 208 ~~~~l~~~G~~v~~g~ 223 (305)
T cd08270 208 ALELLAPGGTVVSVGS 223 (305)
T ss_pred HHHHhcCCCEEEEEec
Confidence 5567778888888763
No 281
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.55 E-value=0.37 Score=49.43 Aligned_cols=90 Identities=18% Similarity=0.223 Sum_probs=61.5
Q ss_pred hHHHHHHhc-----CcCCCcEEEEeccCCCchhHHHHHHHHhc----cCcEEEe-cchhhHHHHHhhCccccccceeeec
Q 011973 285 LAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLST 354 (474)
Q Consensus 285 ltaAvvl~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~----~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t 354 (474)
-|++.|++= |+-.-++|+|+|... -||+-+|..|.+ ++-.|++ .++. .
T Consensus 139 cTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~AtVt~~hs~t--------------------~ 196 (286)
T PRK14184 139 CTPAGVMTLLERYGLSPAGKKAVVVGRSN--IVGKPLALMLGAPGKFANATVTVCHSRT--------------------P 196 (286)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhCCcccCCCEEEEEeCCc--------------------h
Confidence 366666653 344678999999998 999999999998 7888888 1111 0
Q ss_pred cccc--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCee
Q 011973 355 SYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF 400 (474)
Q Consensus 355 ~~~~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~--~~R~dc~ 400 (474)
++++ +.+||+| +| +.++++.. ++|++++|+. +++. ++--|+-
T Consensus 197 ~l~~~~~~ADIVI~AvG~p~li~~~~v---k~GavVIDVG-i~~~~~~l~GDVd 246 (286)
T PRK14184 197 DLAEECREADFLFVAIGRPRFVTADMV---KPGAVVVDVG-INRTDDGLVGDCD 246 (286)
T ss_pred hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-eeccCCCccCCcc
Confidence 1121 4556655 33 34677666 9999999999 7763 4445554
No 282
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.51 E-value=0.35 Score=49.54 Aligned_cols=103 Identities=18% Similarity=0.241 Sum_probs=67.4
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|++.|++=+ +-.-++|+++|... -||+-+|..|.+++-.|++ .++- . ++++
T Consensus 140 Tp~avi~ll~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~AtVtichs~T--~------------------nl~~~ 197 (282)
T PRK14182 140 TPAGVMRMLDEARVDPKGKRALVVGRSN--IVGKPMAMMLLERHATVTIAHSRT--A------------------DLAGE 197 (282)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--C------------------CHHHH
Confidence 666666543 44688999999998 9999999999999999998 2111 0 1111
Q ss_pred -CceeEEE--EcC--cCChhhhhcCCCCceeecccccCcc---CCCCCeeeec-----CCccccCCCCc
Q 011973 359 -HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIPPSLS 414 (474)
Q Consensus 359 -~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y~~-----~~am~vP~~~~ 414 (474)
+.+||+| +|+ .++++.. ++|+++||+. +.+. ++.-|+-+.+ ...+.||+.+-
T Consensus 198 ~~~ADIvI~AvGk~~~i~~~~i---k~gaiVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTPVPGGVG 262 (282)
T PRK14182 198 VGRADILVAAIGKAELVKGAWV---KEGAVVIDVG-MNRLADGKLVGDVEFAAAAARASAITPVPGGVG 262 (282)
T ss_pred HhhCCEEEEecCCcCccCHHHc---CCCCEEEEee-ceecCCCCeeCCCCHHHHHhhccEecCCCCCCh
Confidence 3566666 342 4666655 9999999998 6662 4445654322 22244666543
No 283
>PRK07023 short chain dehydrogenase; Provisional
Probab=91.50 E-value=0.21 Score=47.56 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=29.1
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 333 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~ 333 (474)
..|+++|++| -||+++|+.|+++|.+|++ |+.+
T Consensus 2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCc--chHHHHHHHHHhCCCEEEEEecCcc
Confidence 3689999998 9999999999999999988 6544
No 284
>PRK07201 short chain dehydrogenase; Provisional
Probab=91.50 E-value=0.24 Score=54.54 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=38.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++++++.+++
T Consensus 371 ~k~vlItGas~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 415 (657)
T PRK07201 371 GKVVLITGASS--GIGRATAIKVAEAGATVFLVARNGEALDELVAEI 415 (657)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888887775
No 285
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.42 E-value=0.41 Score=49.00 Aligned_cols=90 Identities=20% Similarity=0.197 Sum_probs=62.3
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++- . ++++
T Consensus 140 cTp~aii~lL~~y~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~ATVt~chs~T--~------------------dl~~ 197 (282)
T PRK14180 140 CTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFT--T------------------DLKS 197 (282)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEEcCCC--C------------------CHHH
Confidence 3566655543 44688999999998 9999999999999999999 2111 0 1111
Q ss_pred --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCee
Q 011973 359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF 400 (474)
Q Consensus 359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~--~~R~dc~ 400 (474)
+.+||+| +| +.++++.. ++|+++||+. ++.. ++.-|+-
T Consensus 198 ~~k~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~~~gkl~GDvd 243 (282)
T PRK14180 198 HTTKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHVDGKIVGDVD 243 (282)
T ss_pred HhhhcCEEEEccCCcCcCCHHHc---CCCcEEEEec-ccccCCceeCCcC
Confidence 3556655 34 34777666 9999999998 6652 5556665
No 286
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=91.38 E-value=1 Score=48.29 Aligned_cols=157 Identities=13% Similarity=0.104 Sum_probs=92.5
Q ss_pred ceeeecCChhHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee
Q 011973 276 KIKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV 351 (474)
Q Consensus 276 ~irvv~GnsltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~ 351 (474)
+-|.=+|.|.. -.+++.. ....++|+|+|.- .||+.+|+.|...|.+|+. +++.+...... .+. .
T Consensus 172 Dn~yg~g~s~~-~~i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~---~G~--~-- 240 (406)
T TIGR00936 172 DNRYGTGQSTI-DGILRATNLLIAGKTVVVAGYG---WCGKGIAMRARGMGARVIVTEVDPIRALEAAM---DGF--R-- 240 (406)
T ss_pred hcccccchhHH-HHHHHhcCCCCCcCEEEEECCC---HHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh---cCC--E--
Confidence 34666777744 3344443 3456799999976 8999999999999999988 45544322211 111 1
Q ss_pred eecccc-c-CceeEEEE----cCcCChhhhhcCCCCceeecccccCcc--------------CCCCCee---eecCCcc-
Q 011973 352 LSTSYA-A-HKTKIWLV----GDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCF---YHSTPAM- 407 (474)
Q Consensus 352 ~~t~~~-~-~~~~vwiv----g~~i~~~eq~~a~~G~~f~~~~~v~p~--------------~~R~dc~---y~~~~am- 407 (474)
+.+.+ + +.++++|. -..++.+....+++|++++-+.+++.+ +.|.-.. .+++-.+
T Consensus 241 -v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~ 319 (406)
T TIGR00936 241 -VMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIY 319 (406)
T ss_pred -eCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEE
Confidence 11222 2 56677662 234566677889999999998886541 2332111 1111111
Q ss_pred cc-CCCCccccccccccCcchhHHHHHhhhhhhhcCCCC
Q 011973 408 II-PPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 445 (474)
Q Consensus 408 ~v-P~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~ 445 (474)
.+ -+..-|+- |..+.|..+|.--+|-=.+-+++=|.+
T Consensus 320 ll~~GrlvNl~-~~~ghp~~vmd~sfa~q~la~~~l~~~ 357 (406)
T TIGR00936 320 LLAEGRLVNLA-AAEGHPSEVMDMSFANQALAAEYLWKN 357 (406)
T ss_pred EEeCCceeccc-CCCCCcceeeCHHHHHHHHHHHHHHhc
Confidence 11 11355566 788899999976665544444444443
No 287
>PLN02778 3,5-epimerase/4-reductase
Probab=91.35 E-value=0.37 Score=48.59 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=31.2
Q ss_pred hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
++.|+ .+.+|+|+|++| =||+.+++.|.++|.+|+.
T Consensus 2 ~~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~ 38 (298)
T PLN02778 2 NGTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHY 38 (298)
T ss_pred CCCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 45666 356899999999 9999999999999999975
No 288
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=91.27 E-value=0.42 Score=39.49 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=43.8
Q ss_pred EEEEeccCCCchhHHHHHHHHhccC---cEEEe---cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEE
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV 366 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~---v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwiv 366 (474)
+|.++|+- ++|.|+++.|.+.| .++.+ |++++.++++++.+.+. . ..+++ . +.++++|+
T Consensus 1 kI~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~----~-~~~~~~~~~~advvil 67 (96)
T PF03807_consen 1 KIGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQA----T-ADDNEEAAQEADVVIL 67 (96)
T ss_dssp EEEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEE----E-SEEHHHHHHHTSEEEE
T ss_pred CEEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccc----c-cCChHHhhccCCEEEE
Confidence 46778665 99999999999999 88885 99999999999977332 1 11343 3 66777663
No 289
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=91.24 E-value=0.28 Score=49.13 Aligned_cols=83 Identities=17% Similarity=0.260 Sum_probs=55.9
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcCc--CC-
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD--LT- 371 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~~--i~- 371 (474)
|.++|. | .+|+++|+.|++.|.+|++ |++++.+.+++. +. ...++.+ . ++++++| +-+. +.
T Consensus 2 IgvIG~-G--~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~------~~~~~~~~~~~~aDivi~~vp~~~~~~~ 71 (291)
T TIGR01505 2 VGFIGL-G--IMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GA------VTAETARQVTEQADVIFTMVPDSPQVEE 71 (291)
T ss_pred EEEEEe-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------cccCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 778886 4 9999999999999999998 888888887754 11 1122332 2 5666644 2221 11
Q ss_pred ---h-hh-hhcCCCCceeecccccCcc
Q 011973 372 ---G-KE-QARAPKGTIFIPYTQIPPR 393 (474)
Q Consensus 372 ---~-~e-q~~a~~G~~f~~~~~v~p~ 393 (474)
. +. ...+++|+++++.|.++|.
T Consensus 72 v~~~~~~~~~~~~~g~iivd~st~~~~ 98 (291)
T TIGR01505 72 VAFGENGIIEGAKPGKTLVDMSSISPI 98 (291)
T ss_pred HHcCcchHhhcCCCCCEEEECCCCCHH
Confidence 1 11 2346899999999998885
No 290
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=91.23 E-value=0.4 Score=45.59 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=27.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.|+|+|++| -||+++|+.|+++|.+|.+
T Consensus 3 ~k~~lVtG~s~--giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 3 QRIAYVTGGMG--GIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence 36789999998 9999999999999999887
No 291
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=91.20 E-value=2.5 Score=43.51 Aligned_cols=158 Identities=19% Similarity=0.256 Sum_probs=95.3
Q ss_pred HHHcCCcEEEeccc----cccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973 241 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 291 (474)
Q Consensus 241 A~k~G~kV~~LG~l----n~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl 291 (474)
|.++|++++.|+.= +++|.+ ....-+.+.|+|+ ..++.|+.+.+ +=..++.
T Consensus 61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 140 (304)
T TIGR00658 61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII 140 (304)
T ss_pred HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 45699999999643 335543 5566678888887 35677777543 1134555
Q ss_pred hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH---HHHhhC---ccccccceeeec-ccc-c-Cce
Q 011973 292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRI---PVEAQHNLVLST-SYA-A-HKT 361 (474)
Q Consensus 292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~---~l~~~~---~~~~~~~l~~~t-~~~-~-~~~ 361 (474)
+.... +..+|.++|..+ .+.+..+.+|.+-|++|.+-.++.|+ .+.+++ ..+.+.. +..+ +.+ + +++
T Consensus 141 e~~g~l~g~~v~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~a 217 (304)
T TIGR00658 141 EHFGKLKGVKVVYVGDGN--NVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEIAKENGGS-VELTHDPVEAVKGA 217 (304)
T ss_pred HHhCCCCCcEEEEEeCCC--chHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence 54432 456899999986 89999999999999999993333332 111111 1112223 2233 334 4 888
Q ss_pred eEEEEcCcCChh------hhhcCCCCceeecccccCcc---CCCCCee-eecCCcc
Q 011973 362 KIWLVGDDLTGK------EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 407 (474)
Q Consensus 362 ~vwivg~~i~~~------eq~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~am 407 (474)
+|+.+..|.... +.... +-+| +++.+ ..|+|+. .|.+|+.
T Consensus 218 Dvvy~~~w~~~~~~~~~~~~~~~-----~~~y-~l~~~~l~~~~~~~ivmHplP~~ 267 (304)
T TIGR00658 218 DVIYTDVWVSMGEEDKKEERLKL-----FRPY-QVNEELMELAKPEVIFMHCLPAH 267 (304)
T ss_pred CEEEEcCcccCccccccHHHHHH-----hcCC-cCCHHHHhhcCCCCEEECCCCCC
Confidence 887775554211 11111 2234 37777 5678886 5888874
No 292
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.20 E-value=0.37 Score=49.45 Aligned_cols=81 Identities=22% Similarity=0.281 Sum_probs=57.1
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|+..|++=+ +-.-++|+|+|.+. -||+-+|..|.++|-.|++ .++-+ ++++
T Consensus 138 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVtichs~T~--------------------~l~~~ 195 (287)
T PRK14173 138 TPAGVVRLLKHYGIPLAGKEVVVVGRSN--IVGKPLAALLLREDATVTLAHSKTQ--------------------DLPAV 195 (287)
T ss_pred CHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEeCCCCC--------------------CHHHH
Confidence 566666544 33578999999998 9999999999999999998 11110 1111
Q ss_pred -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+.+||+| +| .-++++.. ++|+++||+. +++
T Consensus 196 ~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDVG-in~ 230 (287)
T PRK14173 196 TRRADVLVVAVGRPHLITPEMV---RPGAVVVDVG-INR 230 (287)
T ss_pred HhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence 3555655 44 34666666 9999999998 554
No 293
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.16 E-value=0.43 Score=48.86 Aligned_cols=91 Identities=18% Similarity=0.222 Sum_probs=62.8
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .++- .++++
T Consensus 139 cTp~avi~lL~~y~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVt~chs~T--------------------~nl~~ 196 (282)
T PRK14166 139 CTPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKT--------------------KDLSL 196 (282)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------------------CCHHH
Confidence 3566665544 34678999999998 9999999999999999998 2111 01121
Q ss_pred --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCeee
Q 011973 359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY 401 (474)
Q Consensus 359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y 401 (474)
+.+||+| +| +.++++.. ++|+++||+. +++. ++--||-+
T Consensus 197 ~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd~ 244 (282)
T PRK14166 197 YTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRLESGKIVGDVDF 244 (282)
T ss_pred HHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEec-ccccCCCCeeCCCCH
Confidence 3566666 33 34777766 9999999998 6662 44466553
No 294
>PRK06523 short chain dehydrogenase; Provisional
Probab=91.16 E-value=0.26 Score=47.40 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 333 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~ 333 (474)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 8 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTK--GIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeCChh
Confidence 357899999998 9999999999999999988 5543
No 295
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.14 E-value=0.39 Score=49.18 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=61.9
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|+..|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .++- . ++++
T Consensus 139 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVtichs~T--------------~------~l~~~ 196 (282)
T PRK14169 139 TPYGIMALLDAYDIDVAGKRVVIVGRSN--IVGRPLAGLMVNHDATVTIAHSKT--------------R------NLKQL 196 (282)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEECCCC--------------C------CHHHH
Confidence 566665544 44678999999998 9999999999999999998 1111 0 1111
Q ss_pred -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973 359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 400 (474)
Q Consensus 359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~ 400 (474)
+.+||+| +| ..++++.. ++|+++||+. +.+. ++.-||-
T Consensus 197 ~~~ADIvI~AvG~p~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 242 (282)
T PRK14169 197 TKEADILVVAVGVPHFIGADAV---KPGAVVIDVG-ISRGADGKLLGDVD 242 (282)
T ss_pred HhhCCEEEEccCCcCccCHHHc---CCCcEEEEee-ccccCCCCeeecCc
Confidence 3556655 33 35777766 9999999998 6652 4445555
No 296
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=91.08 E-value=0.71 Score=50.93 Aligned_cols=44 Identities=14% Similarity=0.105 Sum_probs=38.3
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
..+.|+++|+. -+|+|+|..|.+.|.+|.+ |+.++.++|.+++.
T Consensus 378 ~~k~vlIlGaG---GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~ 423 (529)
T PLN02520 378 AGKLFVVIGAG---GAGKALAYGAKEKGARVVIANRTYERAKELADAVG 423 (529)
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence 45789999994 6999999999999999888 88899999988763
No 297
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=91.07 E-value=1.1 Score=48.35 Aligned_cols=101 Identities=18% Similarity=0.141 Sum_probs=67.7
Q ss_pred eeeecCChhHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 011973 277 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 352 (474)
Q Consensus 277 irvv~GnsltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~ 352 (474)
-|.=+|.|.. -.+++.+. ...++|+|+|+- .||+.+|+.|...|.+|++ +++.|.+..++ .+... +
T Consensus 180 n~~g~g~s~~-~~i~r~t~~~l~GktVvViG~G---~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~~----~- 249 (413)
T cd00401 180 NLYGCRESLI-DGIKRATDVMIAGKVAVVAGYG---DVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYEV----M- 249 (413)
T ss_pred ccchhchhhH-HHHHHhcCCCCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCEE----c-
Confidence 4555777753 44455443 357799999987 8999999999999999988 66667654433 22111 1
Q ss_pred ecccc-c-CceeEEE--Ec--CcCChhhhhcCCCCceeecccc
Q 011973 353 STSYA-A-HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 353 ~t~~~-~-~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
+.+ + +.++++| .| ..++.+....+++|.+++-+..
T Consensus 250 --~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~ 290 (413)
T cd00401 250 --TMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGH 290 (413)
T ss_pred --cHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCC
Confidence 222 2 4567766 33 3455566888999999987775
No 298
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=91.02 E-value=0.4 Score=45.14 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=33.3
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 341 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~-~~~~~~~l~~~ 341 (474)
+.++++|++| -||+++|+.|+++|.+|++ | ++++.+++..+
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 44 (242)
T TIGR01829 1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE 44 (242)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 4689999998 9999999999999999877 4 56666655444
No 299
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=91.00 E-value=0.51 Score=51.74 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=60.2
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------ccccc---ceeeec-ccc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQH---NLVLST-SYA 357 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~-------------~~~~~---~l~~~t-~~~ 357 (474)
.-++|.|+|+ | .+|+.||..|++.|++|++ ++++.+++..+.+. .+... ..+..+ +++
T Consensus 6 ~i~~V~VIGa-G--~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~ 82 (507)
T PRK08268 6 SIATVAVIGA-G--AMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA 82 (507)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH
Confidence 4578999999 5 9999999999999999999 88888877432221 11111 112223 554
Q ss_pred c-CceeEEE--EcCcCChhh-----hh-cCCCCceee-cccccCcc
Q 011973 358 A-HKTKIWL--VGDDLTGKE-----QA-RAPKGTIFI-PYTQIPPR 393 (474)
Q Consensus 358 ~-~~~~vwi--vg~~i~~~e-----q~-~a~~G~~f~-~~~~v~p~ 393 (474)
+ ++++++| |-+.++-+. +. -.|+++++. ..|-+|+.
T Consensus 83 ~~~~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~i~ 128 (507)
T PRK08268 83 DLADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSIT 128 (507)
T ss_pred HhCCCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 4 7777766 333333222 22 248999885 77777776
No 300
>PRK07791 short chain dehydrogenase; Provisional
Probab=90.94 E-value=0.36 Score=47.97 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=36.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~---------~~~~~l~~~~~ 343 (474)
.+.++++|+++ -||+++|+.|+++|.+|.+ ++. ++++++.+++.
T Consensus 6 ~k~~lITGas~--GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~ 60 (286)
T PRK07791 6 GRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV 60 (286)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH
Confidence 46899999997 9999999999999999988 544 66777776653
No 301
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=90.90 E-value=0.87 Score=44.88 Aligned_cols=150 Identities=17% Similarity=0.136 Sum_probs=84.1
Q ss_pred EEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEc----CcC-C
Q 011973 302 LLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVG----DDL-T 371 (474)
Q Consensus 302 ~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg----~~i-~ 371 (474)
..+|.|| .||+++|+.|.+.|..|.+ |.++.++...+++... +...+.+ + +.++|+++= .+. .
T Consensus 4 ~~i~GtG--niG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-----i~~~~~~dA~~~aDVVvLAVP~~a~~~v 76 (211)
T COG2085 4 IAIIGTG--NIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-----ITGGSNEDAAALADVVVLAVPFEAIPDV 76 (211)
T ss_pred EEEeccC--hHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-----cccCChHHHHhcCCEEEEeccHHHHHhH
Confidence 4556677 9999999999999999999 6777788887775544 2223443 4 667776620 111 1
Q ss_pred hhhhhcCCCCceeecccccCcc-CCCCCeeee---cCCcc-----ccCCCCccccccccccCcchhHHHHHhhhhhhhcC
Q 011973 372 GKEQARAPKGTIFIPYTQIPPR-KLRKDCFYH---STPAM-----IIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEG 442 (474)
Q Consensus 372 ~~eq~~a~~G~~f~~~~~v~p~-~~R~dc~y~---~~~am-----~vP~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEg 442 (474)
.+|.+.+-.|.++||.. +|-. ..++-=+|. ++.+. .+|++ +-+..+|+ +| ++.+..+..
T Consensus 77 ~~~l~~~~~~KIvID~t-np~~~~~~~~~~~~~~~~~saae~va~~lp~a-kVVkAFn~-i~---------a~~l~~~~~ 144 (211)
T COG2085 77 LAELRDALGGKIVIDAT-NPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGA-KVVKAFNT-IP---------AAVLADLAK 144 (211)
T ss_pred HHHHHHHhCCeEEEecC-CCccccCCccccccCCCCCcHHHHHHHHCCCc-chhhhhcc-cC---------HHHhccCCC
Confidence 34444445578888887 5532 444333332 33321 24444 11111111 11 112222222
Q ss_pred CC-CC---ccchhhhhHHHHHHHHHhCCCccC
Q 011973 443 WD-LN---ECGQTMCDIHQVWHASLRHGFRPL 470 (474)
Q Consensus 443 w~-~~---e~G~iv~~id~iw~aa~kHGF~p~ 470 (474)
.. .. =||+-.+...++.+++.+-||+|+
T Consensus 145 ~~~~~~v~vagDD~~Ak~~v~~L~~~iG~~~l 176 (211)
T COG2085 145 PGGRRDVLVAGDDAEAKAVVAELAEDIGFRPL 176 (211)
T ss_pred cCCceeEEEecCcHHHHHHHHHHHHhcCccee
Confidence 11 00 133334677889999999999994
No 302
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.81 E-value=0.34 Score=46.02 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.|+++|++| .||+++|+.|+++|.++.+
T Consensus 6 ~~~vlitGasg--~iG~~l~~~l~~~g~~v~~ 35 (252)
T PRK06077 6 DKVVVVTGSGR--GIGRAIAVRLAKEGSLVVV 35 (252)
T ss_pred CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence 36899999998 9999999999999999876
No 303
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.80 E-value=0.58 Score=48.04 Aligned_cols=81 Identities=15% Similarity=0.197 Sum_probs=55.9
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|++.|++-+ +-.-++|+|+|... -||+-+|..|.++|-.|++ .++- . ++++
T Consensus 147 Tp~av~~ll~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVtv~hs~T--~------------------~l~~~ 204 (287)
T PRK14176 147 TPHGVIRALEEYGVDIEGKNAVIVGHSN--VVGKPMAAMLLNRNATVSVCHVFT--D------------------DLKKY 204 (287)
T ss_pred cHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCEEEEEeccC--C------------------CHHHH
Confidence 555555544 34678999999997 8999999999999999999 2110 0 1111
Q ss_pred -CceeEEEE--cC--cCChhhhhcCCCCceeecccccCc
Q 011973 359 -HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 -~~~~vwiv--g~--~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+.++|+|+ |+ .++++ +.++|++++|+. +..
T Consensus 205 ~~~ADIvv~AvG~p~~i~~~---~vk~gavVIDvG-in~ 239 (287)
T PRK14176 205 TLDADILVVATGVKHLIKAD---MVKEGAVIFDVG-ITK 239 (287)
T ss_pred HhhCCEEEEccCCccccCHH---HcCCCcEEEEec-ccc
Confidence 35556553 43 45555 459999999998 554
No 304
>PRK12744 short chain dehydrogenase; Provisional
Probab=90.77 E-value=0.34 Score=46.65 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=26.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 8 ~k~vlItGa~~--gIG~~~a~~l~~~G~~vv~ 37 (257)
T PRK12744 8 GKVVLIAGGAK--NLGGLIARDLAAQGAKAVA 37 (257)
T ss_pred CcEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence 36899999998 9999999999999999554
No 305
>PRK06398 aldose dehydrogenase; Validated
Probab=90.66 E-value=0.29 Score=47.56 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 333 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~ 333 (474)
.+.|+++|++| -||+++|+.|+++|.+|++ |+++
T Consensus 6 gk~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 6 DKVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 36899999998 9999999999999999998 5543
No 306
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=90.55 E-value=0.53 Score=47.29 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=56.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------ccc---ccceeeec-cccc-
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEA---QHNLVLST-SYAA- 358 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~-------------~~~---~~~l~~~t-~~~~- 358 (474)
++|.++|+- .+|+++|..|++.|.+|.+ ++.+++++.++++. .+. ....+..+ ++++
T Consensus 5 ~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (295)
T PLN02545 5 KKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL 81 (295)
T ss_pred CEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence 569999986 9999999999999999999 77777764333211 100 00112223 3344
Q ss_pred CceeEEEE--cCcCChhh------hhcCCCCceee-cccccCcc
Q 011973 359 HKTKIWLV--GDDLTGKE------QARAPKGTIFI-PYTQIPPR 393 (474)
Q Consensus 359 ~~~~vwiv--g~~i~~~e------q~~a~~G~~f~-~~~~v~p~ 393 (474)
++++++|. -+..+-+. ...++++++++ ..|-+++.
T Consensus 82 ~~aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i~~~ 125 (295)
T PLN02545 82 RDADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSISIT 125 (295)
T ss_pred CCCCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 77777663 11111111 12478898886 66667666
No 307
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.46 E-value=0.61 Score=44.92 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=27.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.|+++|++|.+-||+++|+.|.++|.+|++
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~ 36 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFF 36 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence 36799999994236999999999999999988
No 308
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=90.40 E-value=0.42 Score=51.12 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=32.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 337 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~ 337 (474)
.++|+++||+| -||+++|+.|+++|.+|.+ |++++++.
T Consensus 178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~r~~~~l~~ 217 (406)
T PRK07424 178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALTSNSDKITL 217 (406)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46899999998 9999999999999999987 66666543
No 309
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=90.31 E-value=1.2 Score=45.66 Aligned_cols=141 Identities=11% Similarity=0.099 Sum_probs=77.7
Q ss_pred HcCCcEEEeccccccccccccC-ceeeecCCCCccee----eecCChhHHHHHHhcC--cCCCcEEEEeccCCCchhHHH
Q 011973 243 AKGVKVISLGLLNQGEELNRNG-EIYLERQPNKLKIK----VVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANA 315 (474)
Q Consensus 243 k~G~kV~~LG~ln~~e~ln~~g-~l~v~k~p~~L~ir----vv~GnsltaAvvl~~i--p~~~~~V~l~Gatg~~kig~a 315 (474)
+-|-+|+++|.+.+.-.+..+. .+...+-|+++... ..--+.+||+..+... .+....|++.|++| -||.+
T Consensus 97 ~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG--~vG~~ 174 (348)
T PLN03154 97 KPGDLISGITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASG--AVGQL 174 (348)
T ss_pred CCCCEEEecCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHH
Confidence 4577777777655421111111 12222224423211 1112445555555332 23457899999998 99999
Q ss_pred HHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---ccc-c------CceeEEE--EcCcCChhhhhcCCCC
Q 011973 316 VASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---SYA-A------HKTKIWL--VGDDLTGKEQARAPKG 381 (474)
Q Consensus 316 va~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t---~~~-~------~~~~vwi--vg~~i~~~eq~~a~~G 381 (474)
+++.+...|.+|.. ++.++.+.++++++.+. ++..+ +.. . ...++++ +|.....+-...+.+|
T Consensus 175 aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~---vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~ 251 (348)
T PLN03154 175 VGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIH 251 (348)
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE---EEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccC
Confidence 99988899999876 78888888876665433 33221 111 1 1345555 4433333344456666
Q ss_pred ceeeccc
Q 011973 382 TIFIPYT 388 (474)
Q Consensus 382 ~~f~~~~ 388 (474)
-.++-+.
T Consensus 252 G~iv~~G 258 (348)
T PLN03154 252 GRIAVCG 258 (348)
T ss_pred CEEEEEC
Confidence 6676665
No 310
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=90.26 E-value=0.31 Score=47.10 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=30.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 333 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~ 333 (474)
.+.|+++|++| -||+++|+.|.++|.+|++ ++.+
T Consensus 9 ~k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~~~~~ 44 (266)
T PRK06171 9 GKIIIVTGGSS--GIGLAIVKELLANGANVVNADIHGG 44 (266)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 46799999998 9999999999999999998 5444
No 311
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=90.19 E-value=0.5 Score=44.46 Aligned_cols=79 Identities=13% Similarity=0.211 Sum_probs=46.3
Q ss_pred HHHHHHhc-----CcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 011973 286 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 286 taAvvl~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
|+..+++= ++..-++|+|+|... -||+-++..|.++|..|++ .+.+.+++.-
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~--~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~------------------- 77 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSN--IVGKPLAMLLLNKGATVTICHSKTKNLQEIT------------------- 77 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTT--TTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH-------------------
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcC--CCChHHHHHHHhCCCeEEeccCCCCccccee-------------------
Confidence 45555443 345678999999997 9999999999999999999 1111111110
Q ss_pred CceeEEEEcCc----CChhhhhcCCCCceeeccc
Q 011973 359 HKTKIWLVGDD----LTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 359 ~~~~vwivg~~----i~~~eq~~a~~G~~f~~~~ 388 (474)
+.+||+|+.-+ |+++ |.++|+++||+.
T Consensus 78 ~~ADIVVsa~G~~~~i~~~---~ik~gavVIDvG 108 (160)
T PF02882_consen 78 RRADIVVSAVGKPNLIKAD---WIKPGAVVIDVG 108 (160)
T ss_dssp TTSSEEEE-SSSTT-B-GG---GS-TTEEEEE--
T ss_pred eeccEEeeeeccccccccc---cccCCcEEEecC
Confidence 35566663322 3333 458899999887
No 312
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=90.18 E-value=0.78 Score=48.66 Aligned_cols=125 Identities=14% Similarity=0.143 Sum_probs=78.6
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--c---------cccceeeeccc-cc-CceeEE
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------AQHNLVLSTSY-AA-HKTKIW 364 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~--~---------~~~~l~~~t~~-~~-~~~~vw 364 (474)
+|.|+|.. -+|..+|..|++ |.+|+. +++++.+++++.... + ....+...++. ++ ++++++
T Consensus 2 kI~VIGlG---yvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v 77 (388)
T PRK15057 2 KITISGTG---YVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV 77 (388)
T ss_pred EEEEECCC---HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence 58889876 899999987775 999998 899999999885321 0 11122112223 23 666664
Q ss_pred E--EcCcCChh--------------hhhcCCCCceeecccccCcc---CCCCCe---eeecCCccccCCCCccccccccc
Q 011973 365 L--VGDDLTGK--------------EQARAPKGTIFIPYTQIPPR---KLRKDC---FYHSTPAMIIPPSLSNMHSCENW 422 (474)
Q Consensus 365 i--vg~~i~~~--------------eq~~a~~G~~f~~~~~v~p~---~~R~dc---~y~~~~am~vP~~~~~~~~~e~~ 422 (474)
| |++.++.+ +...+++|.+++.-|-+||. ++++.. -...+|....|++.- -++-
T Consensus 78 ii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~~PE~l~~G~a~----~d~~ 153 (388)
T PRK15057 78 IIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKAL----YDNL 153 (388)
T ss_pred EEeCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHHHHhhcCcEEECcccccCCccc----cccc
Confidence 4 66554432 22345899999999999998 332221 123366666666532 2355
Q ss_pred cCcchhHHHH
Q 011973 423 LGRRVMSAWR 432 (474)
Q Consensus 423 ~prr~~~Ac~ 432 (474)
.|+|+|.+|-
T Consensus 154 ~p~rvv~G~~ 163 (388)
T PRK15057 154 HPSRIVIGER 163 (388)
T ss_pred CCCEEEEEcC
Confidence 6888877643
No 313
>PRK06940 short chain dehydrogenase; Provisional
Probab=90.17 E-value=0.45 Score=46.93 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=33.6
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
+.|+++|+ | -||+++|+.|+ +|.+|.+ |+.++++++.+++.
T Consensus 3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~ 45 (275)
T PRK06940 3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLR 45 (275)
T ss_pred CEEEEECC-C--hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHH
Confidence 46788887 5 79999999997 7999998 88888887776654
No 314
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=90.13 E-value=0.92 Score=46.29 Aligned_cols=92 Identities=14% Similarity=0.106 Sum_probs=59.5
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-----ccc--cceeeecccc-c-CceeEEE--
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-----EAQ--HNLVLSTSYA-A-HKTKIWL-- 365 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~-----~~~--~~l~~~t~~~-~-~~~~vwi-- 365 (474)
.+|.++|+- .+|.++|..|++.|.+|++ |++++.+.+++.... +.. .++...++.+ + ++++++|
T Consensus 5 m~I~iIG~G---~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAG---AWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcC---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 479999986 8999999999999999999 888888888764211 110 1111122443 2 5666655
Q ss_pred EcCcCChhhhhcCCCCceeecccc-cCcc
Q 011973 366 VGDDLTGKEQARAPKGTIFIPYTQ-IPPR 393 (474)
Q Consensus 366 vg~~i~~~eq~~a~~G~~f~~~~~-v~p~ 393 (474)
+-..-..+-...+++++.++.++. +.|.
T Consensus 82 v~~~~~~~v~~~l~~~~~vi~~~~Gi~~~ 110 (328)
T PRK14618 82 VPSKALRETLAGLPRALGYVSCAKGLAPD 110 (328)
T ss_pred CchHHHHHHHHhcCcCCEEEEEeeccccC
Confidence 222222233345688999999887 6654
No 315
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.09 E-value=0.55 Score=48.27 Aligned_cols=90 Identities=21% Similarity=0.219 Sum_probs=62.5
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++- . ++++
T Consensus 141 cTp~av~~lL~~y~i~l~GK~vvViGrS~--iVGkPla~lL~~~~ATVtichs~T--------------~------~L~~ 198 (288)
T PRK14171 141 CTALGCLAVIKKYEPNLTGKNVVIIGRSN--IVGKPLSALLLKENCSVTICHSKT--------------H------NLSS 198 (288)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------------C------CHHH
Confidence 4666665544 34578999999998 9999999999999999998 2111 0 1121
Q ss_pred --CceeEEE--EcC--cCChhhhhcCCCCceeecccccCcc---CCCCCee
Q 011973 359 --HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF 400 (474)
Q Consensus 359 --~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~ 400 (474)
+.+||+| +|+ .++++.. ++|+++||+. +.+. ++.-|+-
T Consensus 199 ~~~~ADIvV~AvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd 245 (288)
T PRK14171 199 ITSKADIVVAAIGSPLKLTAEYF---NPESIVIDVG-INRISGNKIIGDVD 245 (288)
T ss_pred HHhhCCEEEEccCCCCccCHHHc---CCCCEEEEee-ccccCCCCeECCcc
Confidence 3566666 443 4676666 9999999998 7663 4446655
No 316
>PRK06701 short chain dehydrogenase; Provisional
Probab=90.03 E-value=0.44 Score=47.50 Aligned_cols=43 Identities=23% Similarity=0.347 Sum_probs=33.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 342 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~ 342 (474)
.+.|+|+|++| -||+++|+.|+++|.+|.+ |+. ++.+.+.+++
T Consensus 46 ~k~iLItGasg--gIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~ 91 (290)
T PRK06701 46 GKVALITGGDS--GIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRV 91 (290)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 46899999998 9999999999999999988 543 3445554443
No 317
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.01 E-value=0.53 Score=48.53 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=57.3
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++-+ ++++
T Consensus 141 Tp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGkPla~lL~~~~atVtv~hs~T~--------------------~l~~~ 198 (297)
T PRK14186 141 TPAGVMRLLRSQQIDIAGKKAVVVGRSI--LVGKPLALMLLAANATVTIAHSRTQ--------------------DLASI 198 (297)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCCC--------------------CHHHH
Confidence 566665544 34578999999998 9999999999999999998 21110 1111
Q ss_pred -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+.+||+| +| ..++++.. ++|+++||+. +.+
T Consensus 199 ~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~ 233 (297)
T PRK14186 199 TREADILVAAAGRPNLIGAEMV---KPGAVVVDVG-IHR 233 (297)
T ss_pred HhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 3566666 34 34666666 9999999998 554
No 318
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.95 E-value=0.85 Score=46.82 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=57.1
Q ss_pred hHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|++.|++-+. -.-++|+|+|... -||+-+|..|.++|-.|++ .++- . ++++
T Consensus 141 cTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVG~Pla~lL~~~~atVtv~hs~T--~------------------~l~~ 198 (285)
T PRK10792 141 CTPRGIMTLLERYGIDTYGLNAVVVGASN--IVGRPMSLELLLAGCTVTVCHRFT--K------------------NLRH 198 (285)
T ss_pred CCHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCeEEEEECCC--C------------------CHHH
Confidence 36666666553 3578999999997 8999999999999999999 2110 0 1111
Q ss_pred --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+.++|+| +| +.++++.. ++|++++|+. +++
T Consensus 199 ~~~~ADIvi~avG~p~~v~~~~v---k~gavVIDvG-in~ 234 (285)
T PRK10792 199 HVRNADLLVVAVGKPGFIPGEWI---KPGAIVIDVG-INR 234 (285)
T ss_pred HHhhCCEEEEcCCCcccccHHHc---CCCcEEEEcc-ccc
Confidence 3555655 32 34666544 9999999998 655
No 319
>PRK08309 short chain dehydrogenase; Provisional
Probab=89.95 E-value=0.6 Score=44.19 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=33.9
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
.|+++|+|| +|.++++.|+++|.+|.+ |++++.+.++.+++
T Consensus 2 ~vlVtGGtG---~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~ 44 (177)
T PRK08309 2 HALVIGGTG---MLKRVSLWLCEKGFHVSVIARREVKLENVKREST 44 (177)
T ss_pred EEEEECcCH---HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhh
Confidence 589999986 445699999999999988 88888888877654
No 320
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=89.85 E-value=1 Score=41.01 Aligned_cols=65 Identities=23% Similarity=0.321 Sum_probs=42.2
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccc---cccc-eeeeccccc-CceeEEEE
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE---AQHN-LVLSTSYAA-HKTKIWLV 366 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~---~~~~-l~~~t~~~~-~~~~vwiv 366 (474)
+|.++||+| .||+++|..|+..+. ++.| +++++.+....++..- ...+ .+....|++ ++++|+|+
T Consensus 2 KV~IiGa~G--~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvi 75 (141)
T PF00056_consen 2 KVAIIGAAG--NVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVI 75 (141)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEE
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEE
Confidence 789999998 999999999995554 3555 6666666555543331 1111 122334555 89988775
No 321
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.82 E-value=0.6 Score=47.74 Aligned_cols=90 Identities=19% Similarity=0.240 Sum_probs=62.0
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|++.|++=+ +-.-++|+++|... -||+-+|..|-++|..|++ .++- . ++++
T Consensus 141 Tp~av~~lL~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~AtVt~chs~T--------------~------~l~~~ 198 (278)
T PRK14172 141 TPNSVITLIKSLNIDIEGKEVVVIGRSN--IVGKPVAQLLLNENATVTICHSKT--------------K------NLKEV 198 (278)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCC--------------C------CHHHH
Confidence 555555533 44678999999998 9999999999999999998 2111 0 1111
Q ss_pred -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCeee
Q 011973 359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY 401 (474)
Q Consensus 359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~--~~R~dc~y 401 (474)
+.++|+| +| +.++++.. ++|+++||+- +++. ++--|+-+
T Consensus 199 ~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~~~gkl~GDvd~ 244 (278)
T PRK14172 199 CKKADILVVAIGRPKFIDEEYV---KEGAIVIDVG-TSSVNGKITGDVNF 244 (278)
T ss_pred HhhCCEEEEcCCCcCccCHHHc---CCCcEEEEee-ccccCCceeeeccH
Confidence 3566666 33 35777766 9999999996 5553 45556543
No 322
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=89.79 E-value=0.56 Score=46.95 Aligned_cols=85 Identities=14% Similarity=0.197 Sum_probs=56.2
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE--EcC----
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD---- 368 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg~---- 368 (474)
.+|.++|. | .+|+++|+.|.+.|.+|.. |++++.+.+++. + ....+++++ ++++++| +-+
T Consensus 3 ~~IgviG~-G--~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~---g----~~~~~~~~e~~~~~d~vi~~vp~~~~~ 72 (296)
T PRK11559 3 MKVGFIGL-G--IMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA---G----AETASTAKAVAEQCDVIITMLPNSPHV 72 (296)
T ss_pred ceEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC---C----CeecCCHHHHHhcCCEEEEeCCCHHHH
Confidence 36899996 5 9999999999999999988 788887777653 0 011223332 5565544 211
Q ss_pred --cCChhh--hhcCCCCceeecccccCcc
Q 011973 369 --DLTGKE--QARAPKGTIFIPYTQIPPR 393 (474)
Q Consensus 369 --~i~~~e--q~~a~~G~~f~~~~~v~p~ 393 (474)
.+..++ ...+++|+++++.|.++|.
T Consensus 73 ~~v~~~~~~~~~~~~~g~iiid~st~~~~ 101 (296)
T PRK11559 73 KEVALGENGIIEGAKPGTVVIDMSSIAPL 101 (296)
T ss_pred HHHHcCcchHhhcCCCCcEEEECCCCCHH
Confidence 111111 2345899999999998885
No 323
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=89.75 E-value=1.1 Score=39.08 Aligned_cols=86 Identities=13% Similarity=0.144 Sum_probs=48.2
Q ss_pred EEEEeccCCCchhHHHHHHHHhc-cCcEEEe---cchhhHHHHHhhCcccccccee-eec--ccccCceeEEE--EcCcC
Q 011973 300 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLV-LST--SYAAHKTKIWL--VGDDL 370 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~-~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~-~~t--~~~~~~~~vwi--vg~~i 370 (474)
+|.++|++| .+|+.++..|.+ +++++.. +++++-+.++..-+.-. ..+. ..+ .++..++++++ +++..
T Consensus 1 ki~iiG~~g--~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~DvV~~~~~~~~ 77 (122)
T smart00859 1 KVAIVGATG--YVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLK-GEVVLELEPEDFEELAVDIVFLALPHGV 77 (122)
T ss_pred CEEEECCCC--hHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccc-cccccccccCChhhcCCCEEEEcCCcHH
Confidence 478999999 999999999996 6877665 33322223332211111 0101 111 11113566654 44444
Q ss_pred Chh----hhhcCCCCceeeccc
Q 011973 371 TGK----EQARAPKGTIFIPYT 388 (474)
Q Consensus 371 ~~~----eq~~a~~G~~f~~~~ 388 (474)
..+ -+..+.+|.+++|.+
T Consensus 78 ~~~~~~~~~~~~~~g~~viD~s 99 (122)
T smart00859 78 SKEIAPLLPKAAEAGVKVIDLS 99 (122)
T ss_pred HHHHHHHHHhhhcCCCEEEECC
Confidence 444 233468999999988
No 324
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=89.72 E-value=2 Score=44.84 Aligned_cols=164 Identities=15% Similarity=0.195 Sum_probs=98.4
Q ss_pred HHHcCCcEEEeccc----ccccc-------ccccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973 241 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 291 (474)
Q Consensus 241 A~k~G~kV~~LG~l----n~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl 291 (474)
+.++|.+++.|+.= .++|. |....-+.+.|+|+ ...++|+.+.+ +=..++.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 147 (334)
T PRK01713 68 AYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVFNGLTDEFHPTQMLADVLTMI 147 (334)
T ss_pred HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 36899999999743 34555 35556677888886 35789998865 1246666
Q ss_pred hcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH------HHHhhCccccccceeeecccc-c-Cce
Q 011973 292 NSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE------KLKLRIPVEAQHNLVLSTSYA-A-HKT 361 (474)
Q Consensus 292 ~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~------~l~~~~~~~~~~~l~~~t~~~-~-~~~ 361 (474)
+... -+..+|+++|... +.+++..+..|++-|..+.+-.++.|+ ...+++..+.+..+...++.+ + +++
T Consensus 148 e~~g~~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~a 226 (334)
T PRK01713 148 ENCDKPLSEISYVYIGDAR-NNMGNSLLLIGAKLGMDVRICAPKALLPEASLVEMCEKFAKESGARITVTDDIDKAVKGV 226 (334)
T ss_pred HHcCCCcCCcEEEEECCCc-cCHHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCC
Confidence 6543 2456999999963 359999999999999999993333332 112222233333322223444 4 788
Q ss_pred eEEEEcCcCChhhhhc--CCCCceeecccccCcc--C-C-CCCeee-ecCCc
Q 011973 362 KIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--K-L-RKDCFY-HSTPA 406 (474)
Q Consensus 362 ~vwivg~~i~~~eq~~--a~~G~~f~~~~~v~p~--~-~-R~dc~y-~~~~a 406 (474)
+|+..+-|.+-.++.. ...-..|-+|. ++.+ + . |+||.+ |.+|+
T Consensus 227 DvVyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~k~~aivmH~lP~ 277 (334)
T PRK01713 227 DFVHTDVWVSMGEPLETWGERIKLLMPYQ-VTPELMKRTGNPKVKFMHCLPA 277 (334)
T ss_pred CEEEEcceeecccchhhHHHHHHhccCCc-CCHHHHhccCCCCCEEECCCCC
Confidence 8877655544211100 00001344554 8887 3 3 578874 77776
No 325
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=89.63 E-value=0.4 Score=49.78 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=29.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
..++|+|+|+|| -||+++|+.|.++|.+|+.
T Consensus 20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~ 50 (370)
T PLN02695 20 EKLRICITGAGG--FIASHIARRLKAEGHYIIA 50 (370)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEE
Confidence 567899999999 9999999999999999987
No 326
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.63 E-value=0.52 Score=45.68 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=27.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.|+|+|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~ 37 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFF 37 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence 46899999984237999999999999999987
No 327
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=89.48 E-value=0.46 Score=43.05 Aligned_cols=67 Identities=16% Similarity=0.223 Sum_probs=42.9
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE---cC
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV---GD 368 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l---~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv---g~ 368 (474)
.+-+|-++|+ | ++|.+++++|.+.|..|.- |+.+.-++++.+++... ..++++ ++++++++ |+
T Consensus 9 ~~l~I~iIGa-G--rVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~------~~~~~~~~~~aDlv~iavpDd 79 (127)
T PF10727_consen 9 ARLKIGIIGA-G--RVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGA------ILDLEEILRDADLVFIAVPDD 79 (127)
T ss_dssp ---EEEEECT-S--CCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CC
T ss_pred CccEEEEECC-C--HHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccc------ccccccccccCCEEEEEechH
Confidence 3458999999 4 9999999999999998876 77777888887776654 113322 67778664 55
Q ss_pred cCCh
Q 011973 369 DLTG 372 (474)
Q Consensus 369 ~i~~ 372 (474)
-|.+
T Consensus 80 aI~~ 83 (127)
T PF10727_consen 80 AIAE 83 (127)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 328
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=89.31 E-value=0.57 Score=49.59 Aligned_cols=140 Identities=14% Similarity=0.183 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEe--ccccc-------cccccccC---ceeeec-CCCCcce----------------
Q 011973 227 REAINSLIEEAILEADAKGVKVISL--GLLNQ-------GEELNRNG---EIYLER-QPNKLKI---------------- 277 (474)
Q Consensus 227 ~~~in~~Ie~Ai~~A~k~G~kV~~L--G~ln~-------~e~ln~~g---~l~v~k-~p~~L~i---------------- 277 (474)
..+-+.-+...++.|++.|++..-. -.-.+ -++||.|- ++.++. -|++++.
T Consensus 114 dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl 193 (364)
T PLN02616 114 RKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGF 193 (364)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 3345555667788899999986543 32221 25567764 333331 1333431
Q ss_pred ------eeecC--C----hhHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHH
Q 011973 278 ------KVVDG--S----SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLK 339 (474)
Q Consensus 278 ------rvv~G--n----sltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~ 339 (474)
|+..| + .-|++.|++-+. -.-++|+|+|... -||+-+|..|.++|-.|++ .++-
T Consensus 194 ~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~--iVGkPLa~LL~~~~ATVTicHs~T------ 265 (364)
T PLN02616 194 HPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRT------ 265 (364)
T ss_pred ChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCeEEEeCCCC------
Confidence 23333 1 346666666543 3678999999998 9999999999999999999 2111
Q ss_pred hhCccccccceeeeccccc--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 340 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 340 ~~~~~~~~~~l~~~t~~~~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
.++++ +.+||+| +| ..++++.. ++|+++||+- +.+
T Consensus 266 --------------~nl~~~~r~ADIVIsAvGkp~~i~~d~v---K~GAvVIDVG-In~ 306 (364)
T PLN02616 266 --------------KNPEEITREADIIISAVGQPNMVRGSWI---KPGAVVIDVG-INP 306 (364)
T ss_pred --------------CCHHHHHhhCCEEEEcCCCcCcCCHHHc---CCCCEEEecc-ccc
Confidence 01121 4566666 33 34677666 9999999998 655
No 329
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=89.12 E-value=0.48 Score=44.45 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=31.6
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 342 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~-~~~~~l~~~~ 342 (474)
|+++|++| -||+.+|+.|+++|.+|.+ |+. ++.+.+.+++
T Consensus 1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 43 (239)
T TIGR01830 1 ALVTGASR--GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL 43 (239)
T ss_pred CEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 57899998 9999999999999999888 443 4555555543
No 330
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.04 E-value=0.67 Score=47.51 Aligned_cols=81 Identities=17% Similarity=0.233 Sum_probs=57.7
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA- 358 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~- 358 (474)
|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++-+ ++++
T Consensus 142 Tp~avi~ll~~y~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVt~chs~T~--------------------~l~~~ 199 (284)
T PRK14177 142 TPYGMVLLLKEYGIDVTGKNAVVVGRSP--ILGKPMAMLLTEMNATVTLCHSKTQ--------------------NLPSI 199 (284)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCCC--------------------CHHHH
Confidence 666666544 34678999999998 9999999999999999999 21110 1111
Q ss_pred -CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 359 -HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 -~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+.+||+| +| ..++++.. ++|++++|+. +..
T Consensus 200 ~~~ADIvIsAvGk~~~i~~~~i---k~gavVIDvG-in~ 234 (284)
T PRK14177 200 VRQADIIVGAVGKPEFIKADWI---SEGAVLLDAG-YNP 234 (284)
T ss_pred HhhCCEEEEeCCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence 3556655 34 34677666 9999999998 554
No 331
>PRK08655 prephenate dehydrogenase; Provisional
Probab=88.97 E-value=1.1 Score=48.25 Aligned_cols=83 Identities=16% Similarity=0.221 Sum_probs=54.0
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEEEcCcCCh---
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLTG--- 372 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwivg~~i~~--- 372 (474)
+|.++|++| .+|+++|+.|.+.|.+|.+ |++++.+++..+.+-. ..++.+ . ++++++|+--..+.
T Consensus 2 kI~IIGG~G--~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~------~~~~~~e~~~~aDvVIlavp~~~~~~ 73 (437)
T PRK08655 2 KISIIGGTG--GLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE------YANDNIDAAKDADIVIISVPINVTED 73 (437)
T ss_pred EEEEEecCC--HHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe------eccCHHHHhccCCEEEEecCHHHHHH
Confidence 589999999 9999999999999999888 7777766665554321 112332 2 56666553211111
Q ss_pred --hh-hhcCCCCceeeccccc
Q 011973 373 --KE-QARAPKGTIFIPYTQI 390 (474)
Q Consensus 373 --~e-q~~a~~G~~f~~~~~v 390 (474)
++ ...+++|+++++++-+
T Consensus 74 vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 74 VIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HHHHHHhhCCCCCEEEEcccc
Confidence 12 1235789999999853
No 332
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=88.95 E-value=0.71 Score=47.69 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=57.5
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|-.|++ .++- .+.++
T Consensus 149 cTp~avi~lL~~~~i~l~Gk~vvVIGRS~--iVGkPla~lL~~~~ATVtvchs~T--------------------~nl~~ 206 (299)
T PLN02516 149 CTPKGCLELLSRSGIPIKGKKAVVVGRSN--IVGLPVSLLLLKADATVTVVHSRT--------------------PDPES 206 (299)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCC--------------------CCHHH
Confidence 3666666544 44678999999997 9999999999999999999 2211 01121
Q ss_pred --CceeEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 011973 359 --HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 --~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+++||+| +|+ .++++.. ++|++++|+. +..
T Consensus 207 ~~~~ADIvv~AvGk~~~i~~~~v---k~gavVIDvG-in~ 242 (299)
T PLN02516 207 IVREADIVIAAAGQAMMIKGDWI---KPGAAVIDVG-TNA 242 (299)
T ss_pred HHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEee-ccc
Confidence 4566666 343 4555555 9999999998 554
No 333
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=88.91 E-value=0.73 Score=44.48 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=35.8
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+|.++|++| .+|+++|+.|++.|.+|.+ |++++.+.++++
T Consensus 2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 588999888 9999999999999999888 888888888765
No 334
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.90 E-value=0.68 Score=47.78 Aligned_cols=82 Identities=17% Similarity=0.223 Sum_probs=57.6
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhcc----CcEEEe-cchhhHHHHHhhCccccccceeeec
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLKLRIPVEAQHNLVLST 354 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~----~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t 354 (474)
-|++.|++=+ +-.-++|+|+|.+. -||+-+|..|.++ +-.|++ .++- .
T Consensus 143 cTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~atVtv~hs~T--------------------~ 200 (297)
T PRK14168 143 CTPAGIQEMLVRSGVETSGAEVVVVGRSN--IVGKPIANMMTQKGPGANATVTIVHTRS--------------------K 200 (297)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cccHHHHHHHHhcccCCCCEEEEecCCC--------------------c
Confidence 3566665544 44678999999998 9999999999987 788888 2111 0
Q ss_pred cccc--CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 355 SYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 355 ~~~~--~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
++++ +.+||+| +| ..++++.. ++|+++||+. ++.
T Consensus 201 ~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gavVIDvG-in~ 240 (297)
T PRK14168 201 NLARHCQRADILIVAAGVPNLVKPEWI---KPGATVIDVG-VNR 240 (297)
T ss_pred CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEecC-CCc
Confidence 1121 4566666 34 35777766 9999999998 554
No 335
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=88.88 E-value=5.8 Score=41.52 Aligned_cols=163 Identities=18% Similarity=0.161 Sum_probs=95.9
Q ss_pred HHHcCCcEEEecccc----ccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973 241 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 291 (474)
Q Consensus 241 A~k~G~kV~~LG~ln----~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl 291 (474)
+.++|.+++-|+.=+ ++|.+ ....-+.+.|+|+ ..+++|+.+-+ +=+.++.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 147 (331)
T PRK02102 68 AIDLGAHVTYLGPNDSQLGKKESIEDTARVLGRMYDGIEYRGFKQEIVEELAKYSGVPVWNGLTDEWHPTQMLADFMTMK 147 (331)
T ss_pred HHHcCCCEEEcCcccccCCCCcCHHHHHHHHhhcCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 458999999987543 36655 5666677888887 24577777543 1234555
Q ss_pred hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHH---HH---hhCccccccceeeec-ccc-c-Cce
Q 011973 292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LK---LRIPVEAQHNLVLST-SYA-A-HKT 361 (474)
Q Consensus 292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~---l~---~~~~~~~~~~l~~~t-~~~-~-~~~ 361 (474)
+.... +..+|+++|... +.+.+..+..|++-|.+|.+-.++.|+. +. +++.+..+.. +..+ +.+ + +++
T Consensus 148 e~~g~l~g~~va~vGd~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~ea~~~a 225 (331)
T PRK02102 148 EHFGPLKGLKLAYVGDGR-NNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREIAKETGAK-ITITEDPEEAVKGA 225 (331)
T ss_pred HHhCCCCCCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence 54432 457999999973 3689999999999999998833333321 11 1122223333 3234 444 4 888
Q ss_pred eEEEEcCcCChhhhh-cCCCCceeecccccCcc--C--CCCCee-eecCCc
Q 011973 362 KIWLVGDDLTGKEQA-RAPKGTIFIPYTQIPPR--K--LRKDCF-YHSTPA 406 (474)
Q Consensus 362 ~vwivg~~i~~~eq~-~a~~G~~f~~~~~v~p~--~--~R~dc~-y~~~~a 406 (474)
+|+..+-|.+-.+.. +...-..|-+| |++.+ + .++||. .|.+|+
T Consensus 226 Dvvyt~~w~~~~~~~~~~~~~~~~~~y-~vt~ell~~~~~~d~ivmH~lP~ 275 (331)
T PRK02102 226 DVIYTDVWVSMGEEDEWEERIKLLKPY-QVNMDLMKATGNPDVIFMHCLPA 275 (331)
T ss_pred CEEEEcCcccCccccchHHHHHhccCC-cCCHHHHhhhcCCCCEEECCCCC
Confidence 887776554311100 00111233455 38887 4 368887 478886
No 336
>PRK08324 short chain dehydrogenase; Validated
Probab=88.83 E-value=0.58 Score=52.76 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=39.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++++++.+++..
T Consensus 422 gk~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~ 468 (681)
T PRK08324 422 GKVALVTGAAG--GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG 468 (681)
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence 47899999998 9999999999999999988 888888888777554
No 337
>PLN00015 protochlorophyllide reductase
Probab=88.80 E-value=0.49 Score=47.51 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=35.2
Q ss_pred EEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 011973 302 LLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 302 ~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~~l~~~~~ 343 (474)
+++|+++ -||+++|+.|+++| .+|.+ |+.++.+++.+++.
T Consensus 1 lITGas~--GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~ 43 (308)
T PLN00015 1 IITGASS--GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG 43 (308)
T ss_pred CEeCCCC--hHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence 4789997 99999999999999 89888 88888888887764
No 338
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=88.78 E-value=0.54 Score=47.86 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=31.1
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 337 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~ 337 (474)
++|+++|++| =||+++|+.|.++|.+|+. |+++....
T Consensus 5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~ 43 (349)
T TIGR02622 5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYSLDPPTSPN 43 (349)
T ss_pred CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEeCCCccchh
Confidence 6799999999 9999999999999999987 55544333
No 339
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.56 E-value=0.87 Score=46.67 Aligned_cols=105 Identities=21% Similarity=0.230 Sum_probs=66.8
Q ss_pred HHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeecccccC
Q 011973 286 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH 359 (474)
Q Consensus 286 taAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~~ 359 (474)
|++.|++=+ +-.-++|+++|... -||+-+|..|.++|-.|++ .++- ++|++. + +
T Consensus 140 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~AtVti~hs~T--~~l~~~---------~-------~ 199 (281)
T PRK14183 140 TPLGVMELLEEYEIDVKGKDVCVVGASN--IVGKPMAALLLNANATVDICHIFT--KDLKAH---------T-------K 199 (281)
T ss_pred cHHHHHHHHHHcCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--cCHHHH---------H-------h
Confidence 666666544 44688999999997 9999999999999999998 2111 011100 0 3
Q ss_pred ceeEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCeeeec-----CCccccCCCCc
Q 011973 360 KTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIPPSLS 414 (474)
Q Consensus 360 ~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p~---~~R~dc~y~~-----~~am~vP~~~~ 414 (474)
.++|+| +| +.++++.. ++|+++||+. +.+. ++--|+-+.+ ...+.||+.+.
T Consensus 200 ~ADIvV~AvGkp~~i~~~~v---k~gavvIDvG-in~~~~gkl~GDVd~~~~~~~a~~iTPVPGGVG 262 (281)
T PRK14183 200 KADIVIVGVGKPNLITEDMV---KEGAIVIDIG-INRTEDGRLVGDVDFENVAKKCSYITPVPGGVG 262 (281)
T ss_pred hCCEEEEecCcccccCHHHc---CCCcEEEEee-ccccCCCCeECCccHHHHHhhceEecCCCCCCh
Confidence 455555 34 34666665 9999999998 6652 4445554322 11244666554
No 340
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=88.53 E-value=0.85 Score=43.02 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=27.1
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~ 31 (245)
T PRK12824 3 KIALVTGAKR--GIGSAIARELLNDGYRVIA 31 (245)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEE
Confidence 5789999998 9999999999999999988
No 341
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.50 E-value=0.85 Score=48.25 Aligned_cols=45 Identities=18% Similarity=0.303 Sum_probs=37.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--c--chhhHHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~--~~~~~~~l~~~~~ 343 (474)
..+.|+++|++| -||+++|++|+++|.+|++ + +.++++++.+++.
T Consensus 209 ~g~~vlItGasg--gIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~ 257 (450)
T PRK08261 209 AGKVALVTGAAR--GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG 257 (450)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence 457899999998 9999999999999999998 3 3566777766654
No 342
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=88.44 E-value=0.6 Score=44.73 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=30.1
Q ss_pred ccCCCchhHHHHHHHHhccCcEEEe--cchhh----HHHHHhhCc
Q 011973 305 GTVTANKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIP 343 (474)
Q Consensus 305 Gatg~~kig~ava~~L~~~~v~v~l--~~~~~----~~~l~~~~~ 343 (474)
|++..+-||++||+.|+++|.+|++ |++++ ++++.++.+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~ 45 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG 45 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC
Confidence 4552238999999999999999999 77777 556665555
No 343
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=88.40 E-value=0.73 Score=48.47 Aligned_cols=82 Identities=17% Similarity=0.159 Sum_probs=58.2
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 358 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~~~~ 358 (474)
-|++.|++=+ +-.-++|+|+|... -||+-+|..|.++|-.|++ .++- .+.++
T Consensus 196 CTp~avi~LL~~~~i~l~GK~vvVIGRS~--iVGkPla~LL~~~~ATVTicHs~T--------------------~nl~~ 253 (345)
T PLN02897 196 CTPKGCVELLIRSGVEIAGKNAVVIGRSN--IVGLPMSLLLQRHDATVSTVHAFT--------------------KDPEQ 253 (345)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCEEEEEcCCC--------------------CCHHH
Confidence 3666666544 44688999999997 9999999999999999998 2111 01111
Q ss_pred --CceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 359 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 359 --~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+.+||+| +| ..++++.. ++|+++||+. +.+
T Consensus 254 ~~~~ADIvIsAvGkp~~v~~d~v---k~GavVIDVG-in~ 289 (345)
T PLN02897 254 ITRKADIVIAAAGIPNLVRGSWL---KPGAVVIDVG-TTP 289 (345)
T ss_pred HHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 4666766 33 34677666 9999999998 655
No 344
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=88.39 E-value=0.91 Score=49.43 Aligned_cols=61 Identities=26% Similarity=0.382 Sum_probs=45.9
Q ss_pred ecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 280 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 280 v~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
|||.....+.--...+...+.|+++|+ | .+|++++..|.+.|.++.+ |+.++.+++.++..
T Consensus 314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-G--giG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~ 376 (477)
T PRK09310 314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-G--GAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ 376 (477)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 566655555432334445678999996 5 8999999999999999888 88888888877643
No 345
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=88.38 E-value=0.39 Score=49.45 Aligned_cols=66 Identities=17% Similarity=0.290 Sum_probs=42.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCcccc---ccceeee-ccccc-CceeEEEE
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA---QHNLVLS-TSYAA-HKTKIWLV 366 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~--v~l--~~~~~~~~l~~~~~~~~---~~~l~~~-t~~~~-~~~~vwiv 366 (474)
+.+|.++|| | .||+++|..|+.++.. +.| .++++.+-...++..-. ...-+.. ++|+. ++++|+|+
T Consensus 3 ~~Ki~IiGa-G--~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvi 77 (312)
T cd05293 3 RNKVTVVGV-G--QVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIV 77 (312)
T ss_pred CCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEE
Confidence 468999997 8 9999999999966663 444 55665554443322211 1122444 46665 88888765
No 346
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.38 E-value=1.2 Score=45.69 Aligned_cols=81 Identities=15% Similarity=0.220 Sum_probs=57.3
Q ss_pred HHHHHHhc-----CcCCCcEEEEeccCCCchhHHHHHHHHhcc----CcEEEe-cchhhHHHHHhhCccccccceeeecc
Q 011973 286 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTS 355 (474)
Q Consensus 286 taAvvl~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~----~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t~ 355 (474)
|+..|++= |+-.-++|+++|... -||+-+|..|.++ +-.|++ .++- ++
T Consensus 136 Tp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~AtVtvchs~T--------------------~~ 193 (287)
T PRK14181 136 TPAGIIELLKYYEIPLHGRHVAIVGRSN--IVGKPLAALLMQKHPDTNATVTLLHSQS--------------------EN 193 (287)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHhCcCCCCCEEEEeCCCC--------------------CC
Confidence 66666654 445688999999998 9999999999988 788888 1111 01
Q ss_pred ccc--CceeEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 011973 356 YAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 356 ~~~--~~~~vwi--vg~--~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+++ +.+||+| +|+ .++++.. ++|+++||+. +.+
T Consensus 194 l~~~~~~ADIvV~AvG~p~~i~~~~i---k~GavVIDvG-in~ 232 (287)
T PRK14181 194 LTEILKTADIIIAAIGVPLFIKEEMI---AEKAVIVDVG-TSR 232 (287)
T ss_pred HHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence 222 4566666 443 4676666 9999999998 554
No 347
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=88.35 E-value=1.2 Score=44.71 Aligned_cols=85 Identities=9% Similarity=0.091 Sum_probs=53.3
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc-CceeEEEEcCcCCh---
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA-HKTKIWLVGDDLTG--- 372 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t-~~~~-~~~~vwivg~~i~~--- 372 (474)
+|.++| .| .+|.++|+.|.+.|.+|.. ++++..++++++-. +...+ +.++ ++++++|+--..+.
T Consensus 2 ~I~IIG-~G--~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~------~~~~~~~~~~~~~aDlVilavp~~~~~~ 72 (279)
T PRK07417 2 KIGIVG-LG--LIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL------VDEASTDLSLLKDCDLVILALPIGLLLP 72 (279)
T ss_pred eEEEEe-ec--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC------cccccCCHhHhcCCCEEEEcCCHHHHHH
Confidence 588999 46 9999999999999999988 77788777765410 01111 2233 56767553111000
Q ss_pred --hhh-hcCCCCceeecccccCcc
Q 011973 373 --KEQ-ARAPKGTIFIPYTQIPPR 393 (474)
Q Consensus 373 --~eq-~~a~~G~~f~~~~~v~p~ 393 (474)
++. ..+++++++++++-+++.
T Consensus 73 ~~~~l~~~l~~~~ii~d~~Svk~~ 96 (279)
T PRK07417 73 PSEQLIPALPPEAIVTDVGSVKAP 96 (279)
T ss_pred HHHHHHHhCCCCcEEEeCcchHHH
Confidence 122 234678888888766654
No 348
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=88.23 E-value=0.52 Score=48.36 Aligned_cols=64 Identities=16% Similarity=0.179 Sum_probs=42.3
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c--CceeEEE--EcCcCChh
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A--HKTKIWL--VGDDLTGK 373 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~--~~~~vwi--vg~~i~~~ 373 (474)
|+++|+|| -||++++..|++.|-+|++ |+..+-+..... ..+ ..+.+. . ..+|+|| +|+.|-.+
T Consensus 1 IliTGgTG--lIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~---~v~----~~~~~~~~~~~~~DavINLAG~~I~~r 71 (297)
T COG1090 1 ILITGGTG--LIGRALTARLRKGGHQVTILTRRPPKASQNLHP---NVT----LWEGLADALTLGIDAVINLAGEPIAER 71 (297)
T ss_pred CeEecccc--chhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc---ccc----ccchhhhcccCCCCEEEECCCCccccc
Confidence 57999999 9999999999999999999 665533322111 000 011121 1 3578877 88887766
No 349
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=88.18 E-value=0.79 Score=45.99 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=34.4
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
.+|.|+|+. .+|+++|..|++.|.+|++ ++++.+++.++.
T Consensus 4 ~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 4 KNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred cEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 579999985 8999999999999999999 788877776654
No 350
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.17 E-value=0.91 Score=46.77 Aligned_cols=83 Identities=17% Similarity=0.217 Sum_probs=57.4
Q ss_pred hHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhc----cCcEEEe-c-chhhHHHHHhhCccccccceeee
Q 011973 285 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-I-CKDDYEKLKLRIPVEAQHNLVLS 353 (474)
Q Consensus 285 ltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~----~~v~v~l-~-~~~~~~~l~~~~~~~~~~~l~~~ 353 (474)
-|++.|++-+. -.-++|+++|... -||+-+|..|.+ ++..|++ . +...+++ . +
T Consensus 141 cTp~ail~ll~~y~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~---~---------~-- 204 (295)
T PRK14174 141 CTPYGILELLGRYNIETKGKHCVVVGRSN--IVGKPMANLMLQKLKESNCTVTICHSATKDIPS---Y---------T-- 204 (295)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHhccccCCCEEEEEeCCchhHHH---H---------H--
Confidence 46777766554 3578999999998 999999999986 7888888 1 1111111 0 0
Q ss_pred cccccCceeEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 011973 354 TSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 354 t~~~~~~~~vwi--vg--~~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
+.+||+| +| +.++++.. ++|++++|++ ++.
T Consensus 205 -----~~ADIvI~Avg~~~li~~~~v---k~GavVIDVg-i~~ 238 (295)
T PRK14174 205 -----RQADILIAAIGKARFITADMV---KPGAVVIDVG-INR 238 (295)
T ss_pred -----HhCCEEEEecCccCccCHHHc---CCCCEEEEee-ccc
Confidence 3556655 23 35676666 9999999998 654
No 351
>PRK13243 glyoxylate reductase; Reviewed
Probab=88.16 E-value=0.94 Score=46.96 Aligned_cols=97 Identities=8% Similarity=0.083 Sum_probs=64.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 366 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------ 366 (474)
..++|.++|- | .||+.+|+.|...|.+|.. |+.+.. ...+.. +...++++ +.++++++
T Consensus 149 ~gktvgIiG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~-------~~~~~l~ell~~aDiV~l~lP~t~ 216 (333)
T PRK13243 149 YGKTIGIIGF-G--RIGQAVARRAKGFGMRILYYSRTRKPE--AEKELG-------AEYRPLEELLRESDFVSLHVPLTK 216 (333)
T ss_pred CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCChh--hHHHcC-------CEecCHHHHHhhCCEEEEeCCCCh
Confidence 5778999998 5 9999999999999999988 333221 111111 11124433 56666552
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecCC
Q 011973 367 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 405 (474)
Q Consensus 367 --g~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~~ 405 (474)
-..+..+....+++|++++.++| ++.+ +++ -|++..+-+
T Consensus 217 ~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~~~EP~ 272 (333)
T PRK13243 217 ETYHMINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEEEPY 272 (333)
T ss_pred HHhhccCHHHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccCCCCCC
Confidence 23456688899999999999999 4443 222 488877643
No 352
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=88.01 E-value=2.7 Score=44.07 Aligned_cols=165 Identities=17% Similarity=0.217 Sum_probs=101.0
Q ss_pred HHHcCCcEEEeccc----ccccc-------ccccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973 241 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 291 (474)
Q Consensus 241 A~k~G~kV~~LG~l----n~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl 291 (474)
+.++|.+++.|+.= .++|. |.+..-+.+.|+|+ ..+|+|+.+-+ +=+.++.
T Consensus 67 ~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 146 (334)
T PRK12562 67 AYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQ 146 (334)
T ss_pred HHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHhCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 46799999999643 33554 35566677888876 35688888754 1245666
Q ss_pred hcCc---CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCccccccceeeecccc-c-Cc
Q 011973 292 NSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLSTSYA-A-HK 360 (474)
Q Consensus 292 ~~ip---~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~---~l~~---~~~~~~~~~l~~~t~~~-~-~~ 360 (474)
+... -+..+|+++|... +.+++..+..+++-|.++.+-.++.|+ .+.+ +...+.+..+...++.+ + ++
T Consensus 147 e~~g~~~l~gl~va~vGD~~-~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~ 225 (334)
T PRK12562 147 EHLPGKAFNEMTLVYAGDAR-NNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECSALAQKHGGKITLTEDIAAGVKG 225 (334)
T ss_pred HHhCCCCcCCcEEEEECCCC-CCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCC
Confidence 6553 2357999999863 468999999888999999983333322 1111 11222333322223444 4 88
Q ss_pred eeEEEEcCcCChhhhhc--CCCCceeecccccCcc--CC--CCCeee-ecCCcc
Q 011973 361 TKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--KL--RKDCFY-HSTPAM 407 (474)
Q Consensus 361 ~~vwivg~~i~~~eq~~--a~~G~~f~~~~~v~p~--~~--R~dc~y-~~~~am 407 (474)
++|+..+.|.+..+|.. ...-..|-+| |++++ +. |+||.+ |.+|+.
T Consensus 226 aDvvyt~~w~sm~~~~~~~~~~~~~~~~y-~v~~ell~~a~~~~~i~mHcLP~~ 278 (334)
T PRK12562 226 ADFIYTDVWVSMGEPKEKWAERIALLRGY-QVNSKMMALTGNPQVKFLHCLPAF 278 (334)
T ss_pred CCEEEEcCccccccchhhHHHHHHhccCC-cCCHHHHHhhcCCCCEEECCCCCC
Confidence 88888877765443311 0111345566 48888 33 688875 888873
No 353
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=87.97 E-value=0.61 Score=49.04 Aligned_cols=43 Identities=21% Similarity=0.222 Sum_probs=34.8
Q ss_pred HhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhH
Q 011973 291 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 335 (474)
Q Consensus 291 l~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~ 335 (474)
..+.+....+|+|+|+|| -||+++++.|.++|.+|.. |+.++.
T Consensus 53 ~~~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R~~~~~ 97 (390)
T PLN02657 53 FRSKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAREKSGI 97 (390)
T ss_pred ccccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEechhhc
Confidence 334444567899999999 9999999999999999988 665543
No 354
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=87.97 E-value=3.6 Score=42.36 Aligned_cols=162 Identities=19% Similarity=0.229 Sum_probs=94.6
Q ss_pred HHHHcCCcEEEecc----ccccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHH
Q 011973 240 EADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVV 290 (474)
Q Consensus 240 ~A~k~G~kV~~LG~----ln~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvv 290 (474)
-|.++|.+++.|+. +.++|.+ ....-+.+.|+|+ ..+++|+.+-+ +=+.++
T Consensus 64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti 143 (304)
T PRK00779 64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI 143 (304)
T ss_pred HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence 35789999999964 3335554 4446677888887 34567776543 113444
Q ss_pred HhcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c-CceeE
Q 011973 291 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HKTKI 363 (474)
Q Consensus 291 l~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~---~l~~~~~~~~~~~l~~~t-~~~-~-~~~~v 363 (474)
.+.... +..+|.++|..+ .+.+..+..|.+-|.+|.+-.++.++ .+.+++..+.+.. +..+ +.+ + ++++|
T Consensus 144 ~e~~g~l~gl~i~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~aDv 220 (304)
T PRK00779 144 YEHRGSLKGLKVAWVGDGN--NVANSLLLAAALLGFDLRVATPKGYEPDPEIVEKIAKETGAS-IEVTHDPKEAVKGADV 220 (304)
T ss_pred HHHhCCcCCcEEEEEeCCC--ccHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHcCCe-EEEEcCHHHHhCCCCE
Confidence 444332 346899999965 89999999999999999994444332 2222212223333 3334 434 4 88888
Q ss_pred EEEcCcCChhh---hhcCCCCceeecccccCcc---CCCCCee-eecCCcc
Q 011973 364 WLVGDDLTGKE---QARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 407 (474)
Q Consensus 364 wivg~~i~~~e---q~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~am 407 (474)
+....|....+ |.... ..+-+| +++.+ ..|+|+. .|.+|+.
T Consensus 221 vy~~~w~~~~~~~~~~~~~--~~~~~y-~v~~~~l~~~~~~~ivmHplP~~ 268 (304)
T PRK00779 221 VYTDVWVSMGQEAEAEERL--KAFAPY-QVNEELMALAKPDAIFMHCLPAH 268 (304)
T ss_pred EEecCccccccchhHHHHH--HHhccc-CCCHHHHHhcCCCeEEecCCCcc
Confidence 88766554321 10000 112233 37766 4567766 4777753
No 355
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=87.94 E-value=1.5 Score=36.26 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=25.8
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l 329 (474)
..+++.++|+ | .+|+.++++|++. +.++.+
T Consensus 22 ~~~~v~i~G~-G--~~g~~~a~~l~~~~~~~v~v 52 (86)
T cd05191 22 KGKTVVVLGA-G--EVGKGIAKLLADEGGKKVVL 52 (86)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEE
Confidence 4678999999 7 9999999999987 667777
No 356
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=87.82 E-value=0.72 Score=43.93 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=28.6
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
..+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~vlItGas~--~iG~~la~~l~~~G~~v~~ 37 (252)
T PRK08220 7 SGKTVWVTGAAQ--GIGYAVALAFVEAGAKVIG 37 (252)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 347899999998 9999999999999999998
No 357
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=87.77 E-value=0.73 Score=46.23 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=34.1
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
++|.++|+- .+|+++|..|++.|.+|++ +++++.+++++
T Consensus 5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 579999986 8999999999999999999 88888877554
No 358
>PLN02928 oxidoreductase family protein
Probab=87.74 E-value=1.3 Score=46.28 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=59.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccce----eeeccccc--CceeEEEE--
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL----VLSTSYAA--HKTKIWLV-- 366 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l----~~~t~~~~--~~~~vwiv-- 366 (474)
..++|.++|.- .||+++|+.|...|.+|+. |+.++-..-...++...-..+ ....++++ +.+|++++
T Consensus 158 ~gktvGIiG~G---~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 158 FGKTVFILGYG---AIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 46789999985 9999999999999999988 332211110000010000000 01113433 66777663
Q ss_pred ------cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973 367 ------GDDLTGKEQARAPKGTIFIPYTQ---IPPR 393 (474)
Q Consensus 367 ------g~~i~~~eq~~a~~G~~f~~~~~---v~p~ 393 (474)
-..|+.++..+||+|+++|.++| |+.+
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~ 270 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYD 270 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCCccccCHH
Confidence 34677889999999999999999 5544
No 359
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=87.73 E-value=1.1 Score=45.71 Aligned_cols=64 Identities=20% Similarity=0.306 Sum_probs=43.4
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc---ccc-eeeeccccc-CceeEEEE
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHN-LVLSTSYAA-HKTKIWLV 366 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~---~~~-l~~~t~~~~-~~~~vwiv 366 (474)
+|.++|+ | .+|+++|..|+++|. ++.+ +++++.+.+..++.... ..+ .+....+++ ++++++|+
T Consensus 2 kI~IIGa-G--~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi 74 (306)
T cd05291 2 KVVIIGA-G--HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI 74 (306)
T ss_pred EEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence 7899997 5 899999999998885 5666 77887777766653221 111 123334444 78877664
No 360
>PLN03139 formate dehydrogenase; Provisional
Probab=87.73 E-value=0.86 Score=48.53 Aligned_cols=99 Identities=13% Similarity=0.153 Sum_probs=64.5
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE-----
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----- 366 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv----- 366 (474)
-..++|.++|. | .||+++|+.|...|.+|.. ++..+-+.. ++.. .....++++ +.++++++
T Consensus 197 L~gktVGIVG~-G--~IG~~vA~~L~afG~~V~~~d~~~~~~~~~-~~~g------~~~~~~l~ell~~sDvV~l~lPlt 266 (386)
T PLN03139 197 LEGKTVGTVGA-G--RIGRLLLQRLKPFNCNLLYHDRLKMDPELE-KETG------AKFEEDLDAMLPKCDVVVINTPLT 266 (386)
T ss_pred CCCCEEEEEee-c--HHHHHHHHHHHHCCCEEEEECCCCcchhhH-hhcC------ceecCCHHHHHhhCCEEEEeCCCC
Confidence 35678999995 6 9999999999999999988 332111111 1111 111224433 56666552
Q ss_pred ---cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973 367 ---GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 404 (474)
Q Consensus 367 ---g~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~ 404 (474)
-..++.+...+|++|++||.++| ++.+ +++ -|++.++-
T Consensus 267 ~~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EP 322 (386)
T PLN03139 267 EKTRGMFNKERIAKMKKGVLIVNNARGAIMDTQAVADACSSGHIGGYGGDVWYPQP 322 (386)
T ss_pred HHHHHHhCHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcCCceEEEEcCCCCCC
Confidence 23356778899999999999999 4433 444 68887774
No 361
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=87.67 E-value=0.62 Score=43.97 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=27.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 5 ~k~~lVtGas~--~iG~~ia~~l~~~G~~v~~ 34 (235)
T PRK06550 5 TKTVLITGAAS--GIGLAQARAFLAQGAQVYG 34 (235)
T ss_pred CCEEEEcCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46799999998 9999999999999999988
No 362
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=87.65 E-value=0.78 Score=44.85 Aligned_cols=28 Identities=11% Similarity=0.173 Sum_probs=25.1
Q ss_pred EEEEeccCCCchhHHHHHHHHhccC--cEEEe
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMG--IKVAT 329 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~--v~v~l 329 (474)
+|+++|+|| .||+++++.|.++| .+|+.
T Consensus 1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~ 30 (317)
T TIGR01181 1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIV 30 (317)
T ss_pred CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence 489999999 99999999999876 77876
No 363
>PRK12367 short chain dehydrogenase; Provisional
Probab=87.58 E-value=0.78 Score=44.96 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=29.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cch
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 332 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~ 332 (474)
.+.++++|++| -||+++|+.|+++|.+|.+ |++
T Consensus 14 ~k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 14 GKRIGITGASG--ALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence 46899999998 9999999999999999987 554
No 364
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=87.48 E-value=1 Score=42.92 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=34.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhCc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRIP 343 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~--~~~l~~~~~ 343 (474)
..+.|+++|+++ -||+++|+.|+++|.+|++ ++.++ .+.+.+...
T Consensus 4 ~~~~ilITGas~--GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~ 52 (251)
T COG1028 4 SGKVALVTGASS--GIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK 52 (251)
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH
Confidence 457899999997 8999999999999999776 54443 455555443
No 365
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=87.45 E-value=0.47 Score=46.05 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=28.3
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 334 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~ 334 (474)
|+|+|++| -||+++++.|.++|.+|.. |+.+.
T Consensus 1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTG--FIGRALTQRLTKDGHEVTILTRSPPA 34 (292)
T ss_pred CEEEcccc--hhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence 68999999 9999999999999999987 65554
No 366
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=87.43 E-value=0.96 Score=42.31 Aligned_cols=27 Identities=22% Similarity=0.397 Sum_probs=25.2
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
|+++|||| =||+++++.|.++|.+|+.
T Consensus 1 IlI~GatG--~iG~~l~~~l~~~g~~v~~ 27 (236)
T PF01370_consen 1 ILITGATG--FIGSALVRQLLKKGHEVIV 27 (236)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence 78999999 9999999999999999665
No 367
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=87.24 E-value=1.1 Score=44.68 Aligned_cols=44 Identities=18% Similarity=0.288 Sum_probs=39.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+|+++|.++ -||++.|..+.+.|-+|++ |++++|++.+.+.|.
T Consensus 6 nTiLITGG~s--GIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~ 51 (245)
T COG3967 6 NTILITGGAS--GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE 51 (245)
T ss_pred cEEEEeCCcc--hhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence 4688998774 8999999999999999999 999999999999776
No 368
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=86.90 E-value=1.5 Score=45.61 Aligned_cols=41 Identities=10% Similarity=0.082 Sum_probs=33.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
+-++|.|+|+- -+|+.+|..+++.|.+|++ ++.+..+.+++
T Consensus 6 ~i~~VaVIGaG---~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~ 48 (321)
T PRK07066 6 DIKTFAAIGSG---VIGSGWVARALAHGLDVVAWDPAPGAEAALRA 48 (321)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 34689999985 8999999999999999999 66666655443
No 369
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=86.76 E-value=0.55 Score=46.34 Aligned_cols=33 Identities=30% Similarity=0.322 Sum_probs=29.3
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 334 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~ 334 (474)
+|+++|++| -||+.+++.|.++|.+|.. |+.++
T Consensus 2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred eEEEECCcc--chhHHHHHHHHHCCCEEEEEEecCcc
Confidence 689999999 9999999999999999988 65554
No 370
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=86.65 E-value=1.6 Score=42.56 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=30.3
Q ss_pred cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
+-.-++|+++|... -||+-+|..|.++|-.|++
T Consensus 59 ~l~GK~vvVIGrS~--iVGkPla~lL~~~~AtVti 91 (197)
T cd01079 59 RLYGKTITIINRSE--VVGRPLAALLANDGARVYS 91 (197)
T ss_pred CCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEE
Confidence 45688999999997 9999999999999999998
No 371
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=86.59 E-value=1.7 Score=42.93 Aligned_cols=98 Identities=17% Similarity=0.169 Sum_probs=61.7
Q ss_pred hHHHHHHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc-
Q 011973 285 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY- 356 (474)
Q Consensus 285 ltaAvvl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~- 356 (474)
+||+..++.+. ++...|++.|++| .+|.++++.+...|.+|.. +++++.+.+++ ++.+. ++...+.
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~---v~~~~~~~ 202 (326)
T cd08289 129 FTAALSIHRLEENGLTPEQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKE---VIPREELQ 202 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCE---EEcchhHH
Confidence 35555555432 2356899999998 9999999999999999887 78888888854 44322 2211111
Q ss_pred ----cc---CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973 357 ----AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 357 ----~~---~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~ 388 (474)
+. ..+++++ +|.....+-...++++-+|+.+.
T Consensus 203 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g 243 (326)
T cd08289 203 EESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSG 243 (326)
T ss_pred HHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEe
Confidence 11 2355665 33333334455667777788876
No 372
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=86.53 E-value=3.1 Score=41.14 Aligned_cols=99 Identities=19% Similarity=0.171 Sum_probs=60.1
Q ss_pred hhHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--ccc
Q 011973 284 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA 357 (474)
Q Consensus 284 sltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~ 357 (474)
-+||+-.+... .+....|++.|++| .+|.++++.+...|.+|.. +++++.+.+++ ++.+. ++... +..
T Consensus 128 ~~ta~~al~~~~~~~~g~~vlI~ga~g--~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~---vi~~~~~~~~ 201 (329)
T cd08294 128 GLTAYFGLLEICKPKAGETVVVNGAAG--AVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDA---VFNYKTVSLE 201 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE---EEeCCCccHH
Confidence 35555444322 23457899999998 9999999988899999876 78888888876 44322 33222 111
Q ss_pred -c------CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973 358 -A------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 358 -~------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~ 388 (474)
. ...++++ +|.....+-...+++|-+++.+.
T Consensus 202 ~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g 241 (329)
T cd08294 202 EALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCG 241 (329)
T ss_pred HHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEc
Confidence 1 2245555 33322233344556666677665
No 373
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=86.52 E-value=0.87 Score=45.29 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=26.9
Q ss_pred EEEEeccCCCchhHHHHHHHHhccC--cEEEe--cchh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKD 333 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~--v~v~l--~~~~ 333 (474)
+|+|+|||| -||+.+++.|.++| .+|.. |+.+
T Consensus 1 ~vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATG--FLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccch--HHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 489999999 99999999999888 56665 6554
No 374
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.33 E-value=1.2 Score=45.96 Aligned_cols=82 Identities=22% Similarity=0.246 Sum_probs=57.9
Q ss_pred hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhcc----CcEEEe-cchhhHHHHHhhCccccccceeeec
Q 011973 285 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLKLRIPVEAQHNLVLST 354 (474)
Q Consensus 285 ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~----~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t 354 (474)
-|+..|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .++-+
T Consensus 139 cTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T~-------------------- 196 (297)
T PRK14167 139 CTPHGIQKLLAAAGVDTEGADVVVVGRSD--IVGKPMANLLIQKADGGNATVTVCHSRTD-------------------- 196 (297)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--ccHHHHHHHHhcCccCCCCEEEEeCCCCC--------------------
Confidence 3666666544 44678999999998 9999999999987 788888 21110
Q ss_pred cccc--CceeEEEE--cC--cCChhhhhcCCCCceeecccccCc
Q 011973 355 SYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP 392 (474)
Q Consensus 355 ~~~~--~~~~vwiv--g~--~i~~~eq~~a~~G~~f~~~~~v~p 392 (474)
++++ +.++|+|+ |+ .++++.. ++|+++||+. +.+
T Consensus 197 ~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gaiVIDvG-in~ 236 (297)
T PRK14167 197 DLAAKTRRADIVVAAAGVPELIDGSML---SEGATVIDVG-INR 236 (297)
T ss_pred CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence 1111 35666663 53 5777666 9999999998 655
No 375
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=86.30 E-value=2.9 Score=44.26 Aligned_cols=110 Identities=20% Similarity=0.313 Sum_probs=70.7
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--cc-----------ccceeeecccc-c-Ccee
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYA-A-HKTK 362 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~--~~-----------~~~l~~~t~~~-~-~~~~ 362 (474)
+|.++|.. .+|.++|..|++.|.+|+. +++++.+.|++.... +. ..++...++++ + ++++
T Consensus 2 kI~vIGlG---~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad 78 (411)
T TIGR03026 2 KIAVIGLG---YVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD 78 (411)
T ss_pred EEEEECCC---chhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence 58899975 8999999999999999999 888999888764211 00 11222233443 3 5665
Q ss_pred EEE--EcCcCCh-------------hhh-hcCCCCceeecccccCcc---CC-------------CCCeeeecCCccccC
Q 011973 363 IWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-------------RKDCFYHSTPAMIIP 410 (474)
Q Consensus 363 vwi--vg~~i~~-------------~eq-~~a~~G~~f~~~~~v~p~---~~-------------R~dc~y~~~~am~vP 410 (474)
++| |++...+ ++. ..+++|++++.-|-+||. ++ ..||.+..+|..-.|
T Consensus 79 vvii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~ 158 (411)
T TIGR03026 79 VIIICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLRE 158 (411)
T ss_pred EEEEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCC
Confidence 543 6654321 111 235889999998877776 11 136666777766666
Q ss_pred CC
Q 011973 411 PS 412 (474)
Q Consensus 411 ~~ 412 (474)
+.
T Consensus 159 G~ 160 (411)
T TIGR03026 159 GN 160 (411)
T ss_pred CC
Confidence 65
No 376
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=86.27 E-value=1.4 Score=45.72 Aligned_cols=83 Identities=20% Similarity=0.176 Sum_probs=56.2
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEE--------Ec
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------VG 367 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--------vg 367 (474)
.++|-++|.- .||+++|..|..-|.+|+..++..-+..... .. .....++++ +.+|+++ --
T Consensus 142 gkTvGIiG~G---~IG~~va~~l~afgm~v~~~d~~~~~~~~~~---~~---~~~~~~Ld~lL~~sDiv~lh~PlT~eT~ 212 (324)
T COG0111 142 GKTVGIIGLG---RIGRAVAKRLKAFGMKVIGYDPYSPRERAGV---DG---VVGVDSLDELLAEADILTLHLPLTPETR 212 (324)
T ss_pred CCEEEEECCC---HHHHHHHHHHHhCCCeEEEECCCCchhhhcc---cc---ceecccHHHHHhhCCEEEEcCCCCcchh
Confidence 5688999976 8999999999999999999333211111100 00 112234443 5565544 23
Q ss_pred CcCChhhhhcCCCCceeecccc
Q 011973 368 DDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 368 ~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
..|+.++..+||+|++||-++|
T Consensus 213 g~i~~~~~a~MK~gailIN~aR 234 (324)
T COG0111 213 GLINAEELAKMKPGAILINAAR 234 (324)
T ss_pred cccCHHHHhhCCCCeEEEECCC
Confidence 4577889999999999999999
No 377
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=86.24 E-value=1.1 Score=49.23 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=32.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 338 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l 338 (474)
++|.|+|+- ..|+.||..|++.|.+|++ ++++.+++.
T Consensus 6 ~kV~VIGaG---~MG~gIA~~la~aG~~V~l~d~~~e~l~~~ 44 (503)
T TIGR02279 6 VTVAVIGAG---AMGAGIAQVAASAGHQVLLYDIRAEALARA 44 (503)
T ss_pred cEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 469999995 8999999999999999999 888887754
No 378
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=86.21 E-value=9.1 Score=40.19 Aligned_cols=162 Identities=20% Similarity=0.226 Sum_probs=94.1
Q ss_pred HHHcCCcEEEecccc----ccccc-------cccCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 011973 241 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV 291 (474)
Q Consensus 241 A~k~G~kV~~LG~ln----~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gnsl---------taAvvl 291 (474)
+.++|.+++.|+.=+ ++|.+ +...-+.+.|++. ..+++|+.|-+= =..++.
T Consensus 64 ~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 143 (338)
T PRK02255 64 MTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRLVDIIMARVDRHQTVVELAKYATVPVINGMSDYNHPTQELGDLFTMI 143 (338)
T ss_pred HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCcEEEEecCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 457999999986433 24443 4445556666654 345788877551 245666
Q ss_pred hcCc----CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeec-ccc-c
Q 011973 292 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYA-A 358 (474)
Q Consensus 292 ~~ip----~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~t-~~~-~ 358 (474)
+..+ -+..+|.++|..+ .+.+..+..|++-|.+|.+-.++.| +.+++.+. .++.. +..+ +.+ +
T Consensus 144 e~~g~g~~l~glkv~~vGD~~--~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~-~~g~~-~~~~~d~~ea 219 (338)
T PRK02255 144 EHLPEGKKLEDCKVVFVGDAT--QVCVSLMFIATKMGMDFVHFGPKGYQLPEEHLAIAEENCE-VSGGS-VLVTDDVDEA 219 (338)
T ss_pred HHhCCCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCEEEEECCCccccCHHHHHHHHHHHH-hcCCe-EEEEcCHHHH
Confidence 6653 2356999999975 8999999999999999999333322 22222211 22233 3333 444 4
Q ss_pred -CceeEEEEcCcCChhhhhcCC-C-Cceeec-ccccCcc---CCCCCee-eecCCcc
Q 011973 359 -HKTKIWLVGDDLTGKEQARAP-K-GTIFIP-YTQIPPR---KLRKDCF-YHSTPAM 407 (474)
Q Consensus 359 -~~~~vwivg~~i~~~eq~~a~-~-G~~f~~-~~~v~p~---~~R~dc~-y~~~~am 407 (474)
++++|+..+-|.+...|...+ + =..|.| | |++++ ..++||. .|.+|+.
T Consensus 220 v~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y-~v~~ell~~a~~~~ivmHpLP~~ 275 (338)
T PRK02255 220 VKDADFVYTDVWYGLYDAELSEEERMAIFYPKY-QVTPELMAKAGPHAKFMHCLPAT 275 (338)
T ss_pred hCCCCEEEEcccHhhccchhhHHHHHHhhCCCc-eECHHHHhccCCCCEEeCCCCCc
Confidence 788887775555211110000 0 012233 4 48877 4568887 4888863
No 379
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=85.89 E-value=0.86 Score=47.98 Aligned_cols=89 Identities=22% Similarity=0.221 Sum_probs=61.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc--CceeEEE--EcCcC
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL--VGDDL 370 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t-~~~~--~~~~vwi--vg~~i 370 (474)
.....+.|||| =.|.-||++||++|.+-.| ||.++++.|.++|+.+.+..=+-+. ..++ ...+|+| ||-..
T Consensus 6 e~d~iiYGAtG--y~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 6 EYDIIIYGATG--YAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred ceeEEEEcccc--chhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccc
Confidence 45788999999 9999999999999999988 9999999999999998876533211 2233 5557777 44332
Q ss_pred Chhh---hhcCCCCceeeccc
Q 011973 371 TGKE---QARAPKGTIFIPYT 388 (474)
Q Consensus 371 ~~~e---q~~a~~G~~f~~~~ 388 (474)
.--+ -.=+-.||+++|.+
T Consensus 84 ~~g~plv~aC~~~GTdY~DiT 104 (382)
T COG3268 84 RYGEPLVAACAAAGTDYADIT 104 (382)
T ss_pred ccccHHHHHHHHhCCCeeecc
Confidence 1111 11234566666654
No 380
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=85.80 E-value=1.4 Score=44.92 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.9
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
..+.++++|+...+-||+|+|+.|+++|-+|.+
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv 39 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILV 39 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence 456789999951147999999999999999999
No 381
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=85.59 E-value=1.6 Score=45.71 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=71.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc--c-c-CceeEEE------
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY--A-A-HKTKIWL------ 365 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~--~-~-~~~~vwi------ 365 (474)
.++|.+.|.- -+|.--|+...-.|-+|++ +|-+|+..|....... ...+.+|.. + + ..+|++|
T Consensus 168 ~~kv~iiGGG---vvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~r--v~~~~st~~~iee~v~~aDlvIgaVLIp 242 (371)
T COG0686 168 PAKVVVLGGG---VVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGR--VHTLYSTPSNIEEAVKKADLVIGAVLIP 242 (371)
T ss_pred CccEEEECCc---cccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCce--eEEEEcCHHHHHHHhhhccEEEEEEEec
Confidence 4578888876 7899999999999999999 8999999987773332 223345522 3 2 4444444
Q ss_pred ---EcCcCChhhhhcCCCCceeecccccCcc----CCC----CCeeeecCCc
Q 011973 366 ---VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLR----KDCFYHSTPA 406 (474)
Q Consensus 366 ---vg~~i~~~eq~~a~~G~~f~~~~~v~p~----~~R----~dc~y~~~~a 406 (474)
.=+-++.|.++.|+||++.+|++ ++.- ..| +|=+|.+-+.
T Consensus 243 gakaPkLvt~e~vk~MkpGsVivDVA-iDqGGc~Et~~~TTh~~PtY~~~gv 293 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPGSVIVDVA-IDQGGCFETSHPTTHDDPTYEVDGV 293 (371)
T ss_pred CCCCceehhHHHHHhcCCCcEEEEEE-EcCCCceeccccccCCCCceeecCE
Confidence 22456778899999999999999 7664 223 5555555544
No 382
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=85.57 E-value=0.97 Score=46.93 Aligned_cols=25 Identities=8% Similarity=0.203 Sum_probs=22.6
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGI 325 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v 325 (474)
-+|.++||+| .||+++|..|+.+++
T Consensus 4 ~KV~IIGa~G--~VG~~~a~~l~~~~~ 28 (323)
T TIGR01759 4 VRVAVTGAAG--QIGYSLLFRIASGEL 28 (323)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhCCc
Confidence 4799999999 999999999997776
No 383
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=85.42 E-value=1.4 Score=44.46 Aligned_cols=40 Identities=13% Similarity=0.287 Sum_probs=35.2
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
++|.++|+. .+|+++|..|.+.|.+|++ +++++.++++++
T Consensus 5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 579999995 8999999999999999999 788888888764
No 384
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=85.28 E-value=1.2 Score=44.02 Aligned_cols=61 Identities=25% Similarity=0.434 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhhhccccceecccccccCCCceeeccCcchhhhhhhC-CCCCcccchhHHHHhcCCCCCC
Q 011973 41 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTIDRS 112 (474)
Q Consensus 41 ~i~~y~l~~~~~~~~gHsNve~~P~~l~~~~p~Lkyli~TP~~H~lHHs~-~~~NYg~~f~lWDrLFGT~~~~ 112 (474)
.+++|+.+-...=.+.|.+-. . -|.++ .--.||.=||=+ .+.-||..-++||+.|||.-..
T Consensus 172 ~l~GYV~YDmtHYyLHhg~p~---~-----~~~~~---~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl~~~ 233 (240)
T KOG0539|consen 172 GLLGYVCYDMTHYYLHHGSPP---K-----RPYLK---HLKKYHLNHHFKHQDLGFGITSSLWDYVFGTLGPL 233 (240)
T ss_pred chhhhhhhhhhhhhhhcCCCC---C-----chHHH---HHHHHHhhhhhhccccCccccHHHHHHHhccCCCC
Confidence 345666665555555555321 1 01222 224577777755 8999999999999999999654
No 385
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=85.16 E-value=1.7 Score=42.70 Aligned_cols=114 Identities=13% Similarity=0.147 Sum_probs=64.2
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcE---EEe--cc----hhhH---HHHHhhCccccccceeeeccc-cc-Ccee
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIK---VAT--IC----KDDY---EKLKLRIPVEAQHNLVLSTSY-AA-HKTK 362 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~---v~l--~~----~~~~---~~l~~~~~~~~~~~l~~~t~~-~~-~~~~ 362 (474)
...+|++.||- ..|++||..|.+.|++ +.+ |+ ++|- ...|+++.++....-.. .++ ++ ++++
T Consensus 24 ~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~-~~l~~~l~~~d 99 (226)
T cd05311 24 EEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTG-GTLKEALKGAD 99 (226)
T ss_pred cCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCccc-CCHHHHHhcCC
Confidence 46799999995 7999999999999985 767 55 3442 22222222211100010 133 23 5567
Q ss_pred EEEE---cCcCChhhhhcCCCCceeecccccCcc-----C-CCCCe-eeecCCccccCCCCccc
Q 011973 363 IWLV---GDDLTGKEQARAPKGTIFIPYTQIPPR-----K-LRKDC-FYHSTPAMIIPPSLSNM 416 (474)
Q Consensus 363 vwiv---g~~i~~~eq~~a~~G~~f~~~~~v~p~-----~-~R~dc-~y~~~~am~vP~~~~~~ 416 (474)
++|- .-.++++..+.|.++.++.|.+ -|.. + .+..| ++.++..| +|.--+|+
T Consensus 100 vlIgaT~~G~~~~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~-~~~Q~nn~ 161 (226)
T cd05311 100 VFIGVSRPGVVKKEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSD-FPNQVNNV 161 (226)
T ss_pred EEEeCCCCCCCCHHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCC-Ccccccee
Confidence 7661 2236677777777777666887 3322 1 12467 46666444 44444443
No 386
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=85.11 E-value=0.99 Score=46.78 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=21.5
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCc
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGI 325 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v 325 (474)
+|.++||+| .||+.+|..|+.+++
T Consensus 2 KV~IiGAaG--~VG~~~a~~L~~~~~ 25 (323)
T cd00704 2 HVLITGAAG--QIGYNLLFLIASGEL 25 (323)
T ss_pred EEEEECCCc--HHHHHHHHHHHhCCc
Confidence 689999999 999999999997664
No 387
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.05 E-value=2.4 Score=43.67 Aligned_cols=100 Identities=18% Similarity=0.146 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEeccccc-------cccccccC---ceeeec-CCCCcce----------eeecCCh
Q 011973 228 EAINSLIEEAILEADAKGVKV--ISLGLLNQ-------GEELNRNG---EIYLER-QPNKLKI----------KVVDGSS 284 (474)
Q Consensus 228 ~~in~~Ie~Ai~~A~k~G~kV--~~LG~ln~-------~e~ln~~g---~l~v~k-~p~~L~i----------rvv~Gns 284 (474)
.+-+.-+...++.|++.|+++ .-|-.-.+ -++||.|- ++.++. -|+|++. +=|||=+
T Consensus 44 ~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~ 123 (296)
T PRK14188 44 PASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLH 123 (296)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence 344555666777888888874 34432222 34566663 333331 1332331 2245543
Q ss_pred ----------------hHHHHHHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 285 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 285 ----------------ltaAvvl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
-|++.|++=+ +-.-++|.++|.++ -+|+.+|+.|.++|..|++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~--~mG~PmA~~L~~~g~tVtv 187 (296)
T PRK14188 124 VVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN--LVGKPMAQLLLAANATVTI 187 (296)
T ss_pred hhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc--chHHHHHHHHHhCCCEEEE
Confidence 2566666433 44688999999998 9999999999999999999
No 388
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=85.02 E-value=3.9 Score=39.50 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=35.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
.+.|++.|+.| .+|.++++.+...|.++.+ +++++.+.+++
T Consensus 145 g~~vlI~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 187 (325)
T cd08253 145 GETVLVHGGSG--AVGHAAVQLARWAGARVIATASSAEGAELVRQ 187 (325)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 47899999987 9999999999999999888 77777777743
No 389
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=84.98 E-value=3.1 Score=40.02 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=35.7
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
....|++.|++| .+|.++++.+...|.++.+ +++++.+.+++
T Consensus 139 ~~~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 182 (323)
T cd05276 139 AGETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEACRA 182 (323)
T ss_pred CCCEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 356899999987 9999999999999999887 77788877743
No 390
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=84.78 E-value=2.6 Score=42.49 Aligned_cols=99 Identities=15% Similarity=0.122 Sum_probs=62.8
Q ss_pred hHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---ccc
Q 011973 285 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---SYA 357 (474)
Q Consensus 285 ltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t---~~~ 357 (474)
+||+..+... .+....|++.|++| -||.++++++..+|.+|.. ++.++.+.++++++.+. ++..+ ++.
T Consensus 137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G--~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~ 211 (338)
T cd08295 137 LTAYAGFYEVCKPKKGETVFVSAASG--AVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD---AFNYKEEPDLD 211 (338)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce---eEEcCCcccHH
Confidence 5555555332 23457899999998 9999999988899999876 78889888887555432 23211 111
Q ss_pred -c------CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973 358 -A------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 358 -~------~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~ 388 (474)
. ...++++ +|....++-.....+|-.++.+.
T Consensus 212 ~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G 251 (338)
T cd08295 212 AALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACG 251 (338)
T ss_pred HHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEec
Confidence 1 2345555 34333334445566777777765
No 391
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=84.76 E-value=1 Score=45.48 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=27.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 6 ~~~vlVTGatG--fiG~~l~~~L~~~G~~V~~ 35 (340)
T PLN02653 6 RKVALITGITG--QDGSYLTEFLLSKGYEVHG 35 (340)
T ss_pred CCEEEEECCCC--ccHHHHHHHHHHCCCEEEE
Confidence 35799999999 9999999999999999987
No 392
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=84.76 E-value=2.7 Score=44.36 Aligned_cols=39 Identities=18% Similarity=0.306 Sum_probs=34.7
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+|+++|+ | .+|+++|+.|.++|.++.+ +++++.+.++++
T Consensus 2 ~viIiG~-G--~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~ 42 (453)
T PRK09496 2 KIIIVGA-G--QVGYTLAENLSGENNDVTVIDTDEERLRRLQDR 42 (453)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh
Confidence 6899998 6 9999999999999999998 788888888763
No 393
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=84.72 E-value=1.1 Score=39.07 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=26.8
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD 333 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~ 333 (474)
+.++++|++| -||+++++.|+++|. .|.+ |+++
T Consensus 1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLG--GLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 3689999998 999999999998886 4555 5444
No 394
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=84.70 E-value=1.6 Score=44.18 Aligned_cols=102 Identities=13% Similarity=0.082 Sum_probs=63.6
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcCc-CCh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD-LTG 372 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~~-i~~ 372 (474)
+|.++|. | .+|.++|+.|.+.|.+|.+ |++++.+.++++-.... ....+.. . +.+++++ +-+. +++
T Consensus 2 ~Ig~IGl-G--~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~----~s~~~~~~~~~~~dvIi~~vp~~~~~~ 74 (298)
T TIGR00872 2 QLGLIGL-G--RMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV----ANLRELSQRLSAPRVVWVMVPHGIVDA 74 (298)
T ss_pred EEEEEcc-h--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc----CCHHHHHhhcCCCCEEEEEcCchHHHH
Confidence 5889996 5 9999999999999999998 89999998887521111 0011111 1 3455543 2111 111
Q ss_pred --hh-hhcCCCCceeecccccCccCC--------CCCeeeecCCccc
Q 011973 373 --KE-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMI 408 (474)
Q Consensus 373 --~e-q~~a~~G~~f~~~~~v~p~~~--------R~dc~y~~~~am~ 408 (474)
++ ....++|.++++.+-.+|... ++.+.|.+.|++-
T Consensus 75 v~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsG 121 (298)
T TIGR00872 75 VLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSG 121 (298)
T ss_pred HHHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCC
Confidence 12 223578999999987665511 1456788877654
No 395
>PRK07574 formate dehydrogenase; Provisional
Probab=84.69 E-value=1.6 Score=46.41 Aligned_cols=98 Identities=13% Similarity=0.214 Sum_probs=63.9
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 366 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------ 366 (474)
..++|.++|.- .||+++|+.|...|.+|.. |+... ....++.. +....++++ +.++++++
T Consensus 191 ~gktVGIvG~G---~IG~~vA~~l~~fG~~V~~~dr~~~~-~~~~~~~g------~~~~~~l~ell~~aDvV~l~lPlt~ 260 (385)
T PRK07574 191 EGMTVGIVGAG---RIGLAVLRRLKPFDVKLHYTDRHRLP-EEVEQELG------LTYHVSFDSLVSVCDVVTIHCPLHP 260 (385)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCCc-hhhHhhcC------ceecCCHHHHhhcCCEEEEcCCCCH
Confidence 45679999985 8999999999999999988 33211 11111111 111224433 66766552
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973 367 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 404 (474)
Q Consensus 367 --g~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~ 404 (474)
-..++.+.+..|++|+.||.++| ++.+ .++ -|++.++-
T Consensus 261 ~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV~~~EP 315 (385)
T PRK07574 261 ETEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFPQP 315 (385)
T ss_pred HHHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEecCCCCC
Confidence 23456788899999999999999 4333 444 57777664
No 396
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=84.64 E-value=1.2 Score=46.97 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=32.3
Q ss_pred hcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecc
Q 011973 292 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 331 (474)
Q Consensus 292 ~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~ 331 (474)
+.+++...+|.++|.+| .+|..+|+.|.+.|..|.+.+
T Consensus 92 ~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d 129 (374)
T PRK11199 92 KTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILE 129 (374)
T ss_pred cccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeC
Confidence 44455668899999999 999999999999999999933
No 397
>PLN02527 aspartate carbamoyltransferase
Probab=84.60 E-value=9.5 Score=39.39 Aligned_cols=159 Identities=15% Similarity=0.226 Sum_probs=94.9
Q ss_pred HHHcCCcEEEecc------ccccccc-------cccCceeeecCCC---------CcceeeecCCh----------hHHH
Q 011973 241 ADAKGVKVISLGL------LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS----------LAAA 288 (474)
Q Consensus 241 A~k~G~kV~~LG~------ln~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns----------ltaA 288 (474)
+.++|.+++.|+. +.++|.+ .+..-+.+.|+|+ ...++|+.+-+ .=+.
T Consensus 61 ~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ~LaDl~ 140 (306)
T PLN02527 61 MKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAATAEIPVINAGDGPGQHPTQALLDVY 140 (306)
T ss_pred HHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHhCcEEEEECCChhHHHHHHHhCCCCEEECCCCCCCChHHHHHHHH
Confidence 4589999999965 2235655 6777788889986 35688887622 1245
Q ss_pred HHHhcCcC-CCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c-Cc
Q 011973 289 VVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HK 360 (474)
Q Consensus 289 vvl~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l~~~~~~~---~l~~~~~~~~~~~l~~~t-~~~-~-~~ 360 (474)
++.+.... +..+|+++|...-+.+.+..+..|++. |..+.+-.++.|+ .+.+++. +.+.. +..+ +.+ + ++
T Consensus 141 Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~~a~~~ 218 (306)
T PLN02527 141 TIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKMKDDIKDYLT-SKGVE-WEESSDLMEVASK 218 (306)
T ss_pred HHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCCCHHHHHHHH-HcCCE-EEEEcCHHHHhCC
Confidence 55555432 457999999863137889999988876 9999883333332 2222221 23333 3344 444 4 88
Q ss_pred eeEEEEcCcCChhhhhcCCCCcee----ecccccCcc---CCCCCee-eecCC
Q 011973 361 TKIWLVGDDLTGKEQARAPKGTIF----IPYTQIPPR---KLRKDCF-YHSTP 405 (474)
Q Consensus 361 ~~vwivg~~i~~~eq~~a~~G~~f----~~~~~v~p~---~~R~dc~-y~~~~ 405 (474)
++|+.. ++++.|+.. .+-..+ =+| |++.+ ..|+||. .|.+|
T Consensus 219 aDvvyt-~~~q~e~~~--~~~~~~~~~~~~y-~v~~~ll~~a~~~~ivmHclP 267 (306)
T PLN02527 219 CDVLYQ-TRIQRERFG--ERIDLYEAARGKY-IVDKKVMDVLPKHAVVMHPLP 267 (306)
T ss_pred CCEEEE-CCcchhhhc--chHHHHHHhCCCc-eECHHHHhccCCCCEEECCCC
Confidence 988887 455533210 000111 123 37776 4567874 56666
No 398
>PLN00016 RNA-binding protein; Provisional
Probab=84.54 E-value=0.98 Score=46.80 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=32.3
Q ss_pred cCCCcEEEEe----ccCCCchhHHHHHHHHhccCcEEEe--cchhh
Q 011973 295 PKTTAHVLLR----GTVTANKVANAVASSLCQMGIKVAT--ICKDD 334 (474)
Q Consensus 295 p~~~~~V~l~----Gatg~~kig~ava~~L~~~~v~v~l--~~~~~ 334 (474)
....++|+|+ |+|| -||+.+++.|.++|.+|+. |+.+.
T Consensus 49 ~~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred ccccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 3456789999 9999 9999999999999999988 65543
No 399
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=84.42 E-value=2.7 Score=41.20 Aligned_cols=37 Identities=22% Similarity=0.351 Sum_probs=32.3
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 338 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l 338 (474)
.++.++|+. .+|+.+|+-|.++|..|++ +++++.++.
T Consensus 1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~ 39 (225)
T COG0569 1 MKIIIIGAG---RVGRSVARELSEEGHNVVLIDRDEERVEEF 39 (225)
T ss_pred CEEEEECCc---HHHHHHHHHHHhCCCceEEEEcCHHHHHHH
Confidence 368899988 9999999999999999999 888887763
No 400
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=84.39 E-value=1.1 Score=44.92 Aligned_cols=28 Identities=25% Similarity=0.300 Sum_probs=26.6
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
+|+|+|+|| -||+++|+.|.++|.+|++
T Consensus 2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~ 29 (338)
T PRK10675 2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVI 29 (338)
T ss_pred eEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence 589999999 9999999999999999987
No 401
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=84.31 E-value=2.8 Score=42.41 Aligned_cols=102 Identities=15% Similarity=0.096 Sum_probs=66.1
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Cc---eeEEE--EcCc-
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWL--VGDD- 369 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~---~~vwi--vg~~- 369 (474)
+|-++|. | .+|+++|+.|.+.|.+|++ |++++.+.+++. .. . . ..+.++ +. ++++| +-+.
T Consensus 2 ~Ig~IGl-G--~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~----~-~-~~s~~~~~~~~~~advVi~~vp~~~ 71 (299)
T PRK12490 2 KLGLIGL-G--KMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GI----T-A-RHSLEELVSKLEAPRTIWVMVPAGE 71 (299)
T ss_pred EEEEEcc-c--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CC----e-e-cCCHHHHHHhCCCCCEEEEEecCch
Confidence 5788885 4 9999999999999999988 888888888653 11 0 1 112322 22 44543 2221
Q ss_pred -CCh--hhh-hcCCCCceeecccccCcc-------CC-CCCeeeecCCccccCC
Q 011973 370 -LTG--KEQ-ARAPKGTIFIPYTQIPPR-------KL-RKDCFYHSTPAMIIPP 411 (474)
Q Consensus 370 -i~~--~eq-~~a~~G~~f~~~~~v~p~-------~~-R~dc~y~~~~am~vP~ 411 (474)
+.. ++. ..+++|.++++.|.++|. ++ ++.+.|.+-|.+--|.
T Consensus 72 ~~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~ 125 (299)
T PRK12490 72 VTESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVW 125 (299)
T ss_pred HHHHHHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHH
Confidence 111 122 235789999999988885 11 2578899988886554
No 402
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=84.10 E-value=1.8 Score=47.13 Aligned_cols=66 Identities=15% Similarity=0.159 Sum_probs=44.3
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhcc-------Cc--EEEe--cchhhHHHHHhhCcccc---cccee-eeccccc-Cce
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQM-------GI--KVAT--ICKDDYEKLKLRIPVEA---QHNLV-LSTSYAA-HKT 361 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~-------~v--~v~l--~~~~~~~~l~~~~~~~~---~~~l~-~~t~~~~-~~~ 361 (474)
.-+|.++||+| .||+++|..|+.+ ++ ++++ +++++.+-...++.... ..++. ...+|++ +++
T Consensus 100 ~~KV~IIGAaG--~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kda 177 (444)
T PLN00112 100 LINVAVSGAAG--MISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQDA 177 (444)
T ss_pred CeEEEEECCCc--HHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhCcC
Confidence 56899999998 9999999999977 66 4555 78887776555543322 01211 2225555 888
Q ss_pred eEEE
Q 011973 362 KIWL 365 (474)
Q Consensus 362 ~vwi 365 (474)
+|+|
T Consensus 178 DiVV 181 (444)
T PLN00112 178 EWAL 181 (444)
T ss_pred CEEE
Confidence 7755
No 403
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=84.08 E-value=3.6 Score=43.83 Aligned_cols=84 Identities=15% Similarity=0.063 Sum_probs=57.8
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEEcC------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD------ 368 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg~------ 368 (474)
..++|-++|.- .||+++|+.|..-|.+|+..+..+- + .+.. ....++++ +.++|+++--
T Consensus 115 ~gktvGIIG~G---~IG~~vA~~l~a~G~~V~~~dp~~~-----~--~~~~---~~~~~L~ell~~sDiI~lh~PLt~~g 181 (378)
T PRK15438 115 HDRTVGIVGVG---NVGRRLQARLEALGIKTLLCDPPRA-----D--RGDE---GDFRSLDELVQEADILTFHTPLFKDG 181 (378)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCccc-----c--cccc---cccCCHHHHHhhCCEEEEeCCCCCCc
Confidence 57899999985 8999999999999999999332211 0 0110 11124443 5666655222
Q ss_pred ------cCChhhhhcCCCCceeecccc---cCcc
Q 011973 369 ------DLTGKEQARAPKGTIFIPYTQ---IPPR 393 (474)
Q Consensus 369 ------~i~~~eq~~a~~G~~f~~~~~---v~p~ 393 (474)
-++.+.+..+++|+++|..+| |+.+
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~aRG~vVDe~ 215 (378)
T PRK15438 182 PYKTLHLADEKLIRSLKPGAILINACRGAVVDNT 215 (378)
T ss_pred ccccccccCHHHHhcCCCCcEEEECCCchhcCHH
Confidence 356788899999999999999 5554
No 404
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=84.04 E-value=2 Score=43.32 Aligned_cols=75 Identities=20% Similarity=0.205 Sum_probs=48.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCcccccccee-eecc---ccc---------C
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIPVEAQHNLV-LSTS---YAA---------H 359 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~---~~~~~~l~~~~~~~~~~~l~-~~t~---~~~---------~ 359 (474)
-+.|+++|+.| -||++.+..|.++|++++. .+ .+...+||+..|..+-..+- .++. .++ -
T Consensus 5 GKna~vtggag--GIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 5 GKNALVTGGAG--GIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred CceEEEecCCc--hhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 36788888887 8999999999999999998 33 34445566555554422111 2221 111 5
Q ss_pred ceeEEEEcCcCChhh
Q 011973 360 KTKIWLVGDDLTGKE 374 (474)
Q Consensus 360 ~~~vwivg~~i~~~e 374 (474)
++||.|=|++|-.+.
T Consensus 83 ~iDIlINgAGi~~dk 97 (261)
T KOG4169|consen 83 TIDILINGAGILDDK 97 (261)
T ss_pred ceEEEEcccccccch
Confidence 668888777765543
No 405
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=83.93 E-value=1.8 Score=44.96 Aligned_cols=147 Identities=14% Similarity=0.145 Sum_probs=91.6
Q ss_pred cceeeecCChhHHHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 011973 275 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 352 (474)
Q Consensus 275 L~irvv~GnsltaAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~ 352 (474)
.+-|++.+.+. ....+++...++|=++|=- -.|++.|.-|-+.|.+|++ |++++.+.|++.=.+ +.
T Consensus 15 ~~~~~~~~~~~---~~s~~~~~s~~~iGFIGLG---~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~------v~ 82 (327)
T KOG0409|consen 15 FSRRLVKASET---AMSSRITPSKTRIGFIGLG---NMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGAR------VA 82 (327)
T ss_pred hcccccccccc---cccccCCcccceeeEEeec---cchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchh------hh
Confidence 34566666665 5566666677788888754 6899999999999999999 999999999876211 10
Q ss_pred ecccc-cCceeEE--EEcCcCChhhhhc--------CCCCcee-ecccccCcc-------CCC-CCeeeecCCccc-cCC
Q 011973 353 STSYA-AHKTKIW--LVGDDLTGKEQAR--------APKGTIF-IPYTQIPPR-------KLR-KDCFYHSTPAMI-IPP 411 (474)
Q Consensus 353 ~t~~~-~~~~~vw--ivg~~i~~~eq~~--------a~~G~~f-~~~~~v~p~-------~~R-~dc~y~~~~am~-vP~ 411 (474)
-+..+ ++++|++ +|++....++..- .++|-.. +|-|-++|. +.+ ++|.|.+.|+-- +++
T Consensus 83 ~sPaeVae~sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVSGg~~~ 162 (327)
T KOG0409|consen 83 NSPAEVAEDSDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVSGGVKG 162 (327)
T ss_pred CCHHHHHhhcCEEEEEcCChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEeccccCCchh
Confidence 11112 2445443 4666666666433 2344444 888888887 223 999999999742 333
Q ss_pred CCccccccccccCcchhHHHHH
Q 011973 412 SLSNMHSCENWLGRRVMSAWRI 433 (474)
Q Consensus 412 ~~~~~~~~e~~~prr~~~Ac~a 433 (474)
.=+|.=+.=-+=++....||..
T Consensus 163 A~~G~LtimagGde~~~~~~~~ 184 (327)
T KOG0409|consen 163 AEEGTLTIMAGGDEALFEAASP 184 (327)
T ss_pred hhcCeEEEEecCcHHHHHHHHH
Confidence 2222222223334445555543
No 406
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=83.92 E-value=4.3 Score=39.95 Aligned_cols=86 Identities=15% Similarity=0.185 Sum_probs=55.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c-c-c------c-CceeE
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S-Y-A------A-HKTKI 363 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~-~-~------~-~~~~v 363 (474)
....|++.|+.| -+|.++++.+...|.++.. ++.++.+.+++ ++.+. ++... + . + . +..++
T Consensus 140 ~~~~vlI~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~~~~~~~~~~~~~~~~d~ 213 (334)
T PTZ00354 140 KGQSVLIHAGAS--GVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAAII---LIRYPDEEGFAPKVKKLTGEKGVNL 213 (334)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE---EEecCChhHHHHHHHHHhCCCCceE
Confidence 346899999998 9999999999999998766 88888888854 33321 22111 1 1 1 1 33455
Q ss_pred EE--EcCcCChhhhhcCCCCceeeccc
Q 011973 364 WL--VGDDLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 364 wi--vg~~i~~~eq~~a~~G~~f~~~~ 388 (474)
++ +|.....+-.+.+++|-.|+.+.
T Consensus 214 ~i~~~~~~~~~~~~~~l~~~g~~i~~~ 240 (334)
T PTZ00354 214 VLDCVGGSYLSETAEVLAVDGKWIVYG 240 (334)
T ss_pred EEECCchHHHHHHHHHhccCCeEEEEe
Confidence 55 23233344455667777787765
No 407
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=83.61 E-value=8.9 Score=38.95 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=25.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+|.++|+- .+|+++|+.|.+.|.+|.+
T Consensus 5 m~I~iiG~G---~~G~~lA~~l~~~G~~V~~ 32 (308)
T PRK14619 5 KTIAILGAG---AWGSTLAGLASANGHRVRV 32 (308)
T ss_pred CEEEEECcc---HHHHHHHHHHHHCCCEEEE
Confidence 469999986 9999999999999999999
No 408
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=83.54 E-value=1.8 Score=49.54 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=35.1
Q ss_pred cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973 295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 339 (474)
Q Consensus 295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~ 339 (474)
|+.-++|.|+||- -+|+.||..+++.|++|++ ++.+.+++-+
T Consensus 310 ~~~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~ 353 (714)
T TIGR02437 310 AKDVKQAAVLGAG---IMGGGIAYQSASKGTPIVMKDINQHSLDLGL 353 (714)
T ss_pred ccccceEEEECCc---hHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 4466789999998 7999999999999999999 7777766543
No 409
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=83.35 E-value=1.7 Score=44.66 Aligned_cols=101 Identities=20% Similarity=0.203 Sum_probs=66.8
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCccccccceeeeccc-cc-CceeEEE--------E
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPVEAQHNLVLSTSY-AA-HKTKIWL--------V 366 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~-~~~l~~~~~~~~~~~l~~~t~~-~~-~~~~vwi--------v 366 (474)
+|.++|-- ..|...|.-|-+.|..|.+ |++++ -+.++.+ +... ..+. ++ +.++++| |
T Consensus 2 kIafIGLG---~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~-Ga~~------a~s~~eaa~~aDvVitmv~~~~~V 71 (286)
T COG2084 2 KIAFIGLG---IMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAA-GATV------AASPAEAAAEADVVITMLPDDAAV 71 (286)
T ss_pred eEEEEcCc---hhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHc-CCcc------cCCHHHHHHhCCEEEEecCCHHHH
Confidence 67888865 8999999999999999999 78777 5555443 1111 1122 22 4455544 3
Q ss_pred cCcCCh--hhhhcCCCCceeecccccCcc---CCC-----CCeeeecCCccccC
Q 011973 367 GDDLTG--KEQARAPKGTIFIPYTQIPPR---KLR-----KDCFYHSTPAMIIP 410 (474)
Q Consensus 367 g~~i~~--~eq~~a~~G~~f~~~~~v~p~---~~R-----~dc~y~~~~am~vP 410 (474)
.+.+.. .=...++||++|||.|-++|. ++. +-+.|.+-|++--+
T Consensus 72 ~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~ 125 (286)
T COG2084 72 RAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGV 125 (286)
T ss_pred HHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCc
Confidence 333332 123457899999999999998 221 66778888886533
No 410
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=83.31 E-value=1.2 Score=43.76 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=26.3
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
+|+|+|++| .||+++++.|.++|.+|.+
T Consensus 1 kvlV~GatG--~iG~~l~~~l~~~g~~V~~ 28 (328)
T TIGR01179 1 KILVTGGAG--YIGSHTVRQLLESGHEVVV 28 (328)
T ss_pred CEEEeCCCC--HHHHHHHHHHHhCCCeEEE
Confidence 489999999 9999999999999999987
No 411
>PRK05442 malate dehydrogenase; Provisional
Probab=83.28 E-value=1.1 Score=46.48 Aligned_cols=26 Identities=8% Similarity=0.204 Sum_probs=22.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGI 325 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v 325 (474)
-.+|.++||+| .||+.+|..|+.+++
T Consensus 4 ~~KV~IiGaaG--~VG~~~a~~l~~~~~ 29 (326)
T PRK05442 4 PVRVAVTGAAG--QIGYSLLFRIASGDM 29 (326)
T ss_pred CcEEEEECCCc--HHHHHHHHHHHhhhh
Confidence 35899999998 999999999997666
No 412
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=83.15 E-value=2.7 Score=43.00 Aligned_cols=63 Identities=21% Similarity=0.274 Sum_probs=41.2
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccccccceeeeccccc-CceeEEEE
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV 366 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~----l~~~~~~~~~~~l~~~t~~~~-~~~~vwiv 366 (474)
+|.++|+ | .||.++|..|+++|+ ++.+ +++++.+. |....+.... ..+..+++++ ++++++|+
T Consensus 2 kI~IIGa-G--~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~-~~i~~~d~~~l~~aDiVii 73 (308)
T cd05292 2 KVAIVGA-G--FVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKP-VRIYAGDYADCKGADVVVI 73 (308)
T ss_pred EEEEECC-C--HHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCC-eEEeeCCHHHhCCCCEEEE
Confidence 5899999 6 999999999999994 6776 67766654 4333222211 1233345555 88877664
No 413
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=83.11 E-value=1.9 Score=44.52 Aligned_cols=95 Identities=16% Similarity=0.261 Sum_probs=61.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc------
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------ 367 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------ 367 (474)
.++|.++|-- .||+++|+.|...|.+|.. +++++. + +.. ......++++ +.++++++-
T Consensus 136 g~tvgIvG~G---~IG~~vA~~l~afG~~V~~~~~~~~~~-------~-~~~-~~~~~~~l~e~l~~aDvvv~~lPlt~~ 203 (312)
T PRK15469 136 DFTIGILGAG---VLGSKVAQSLQTWGFPLRCWSRSRKSW-------P-GVQ-SFAGREELSAFLSQTRVLINLLPNTPE 203 (312)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCCCCC-------C-Cce-eecccccHHHHHhcCCEEEECCCCCHH
Confidence 4688999976 9999999999999999988 322211 0 100 0011113332 667776632
Q ss_pred --CcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973 368 --DDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 404 (474)
Q Consensus 368 --~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~ 404 (474)
..+..+.+.++++|++|+.++| |+.+ .+| -|++..+-
T Consensus 204 T~~li~~~~l~~mk~ga~lIN~aRG~vVde~aL~~aL~~g~i~gaalDVf~~EP 257 (312)
T PRK15469 204 TVGIINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFSREP 257 (312)
T ss_pred HHHHhHHHHHhcCCCCcEEEECCCccccCHHHHHHHHhcCCeeeEEecCCCCCC
Confidence 2345567889999999999999 5544 334 47777664
No 414
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=83.10 E-value=5.7 Score=39.01 Aligned_cols=85 Identities=15% Similarity=0.200 Sum_probs=52.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc-----cc---CceeEEE--
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-----AA---HKTKIWL-- 365 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~-----~~---~~~~vwi-- 365 (474)
...|++.|++| .+|.++++.+...|.+|.+ +++++.+.++ +++... ++..... +. ..+++++
T Consensus 147 ~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (325)
T cd05280 147 DGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASE---VLDREDLLDESKKPLLKARWAGAIDT 220 (325)
T ss_pred CCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE---EEcchhHHHHHHHHhcCCCccEEEEC
Confidence 45899999998 9999999887799999876 7888888774 444322 2321111 10 2345555
Q ss_pred EcCcCChhhhhcCCCCceeeccc
Q 011973 366 VGDDLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 366 vg~~i~~~eq~~a~~G~~f~~~~ 388 (474)
+|...-.+-.+.++++-+|+.+.
T Consensus 221 ~~~~~~~~~~~~l~~~g~~v~~g 243 (325)
T cd05280 221 VGGDVLANLLKQTKYGGVVASCG 243 (325)
T ss_pred CchHHHHHHHHhhcCCCEEEEEe
Confidence 22222233344556666677775
No 415
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=83.08 E-value=3.6 Score=43.89 Aligned_cols=169 Identities=16% Similarity=0.131 Sum_probs=108.8
Q ss_pred eeecCChhHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecc
Q 011973 278 KVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTS 355 (474)
Q Consensus 278 rvv~GnsltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~ 355 (474)
|-=||.|+.-+ |.+.+- -.-+.|+|+|=- .+|+-||..|.-.|-+|.+..-|.-..||.. ..+. -| .+
T Consensus 188 rYGtgqS~~Dg-I~RaTn~liaGK~vVV~GYG---~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~-MdGf---~V--~~ 257 (420)
T COG0499 188 RYGTGQSLLDG-ILRATNVLLAGKNVVVAGYG---WVGRGIAMRLRGMGARVIVTEVDPIRALEAA-MDGF---RV--MT 257 (420)
T ss_pred ccccchhHHHH-HHhhhceeecCceEEEeccc---ccchHHHHHhhcCCCeEEEEecCchHHHHHh-hcCc---EE--EE
Confidence 44455555433 233322 145677777765 9999999999999999999666666666554 3333 22 22
Q ss_pred c-cc-CceeEEE----EcCcCChhhhhcCCCCceeecccccCcc--------------CCCCCeeeecCC---cc--ccC
Q 011973 356 Y-AA-HKTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTP---AM--IIP 410 (474)
Q Consensus 356 ~-~~-~~~~vwi----vg~~i~~~eq~~a~~G~~f~~~~~v~p~--------------~~R~dc~y~~~~---am--~vP 410 (474)
. ++ ...+|+| .=+.|+.|+.+.|+.|++.|-.-.|+-+ +.|+.+.-.+.| -+ .--
T Consensus 258 m~~Aa~~gDifiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llae 337 (420)
T COG0499 258 MEEAAKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAE 337 (420)
T ss_pred hHHhhhcCCEEEEccCCcCccCHHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEec
Confidence 3 23 4557777 4578999999999999999977654322 233332211111 11 112
Q ss_pred CCCccccccccccCcchhHHHHHhhhhhhhcCCCCC---ccch--hhhhHHH
Q 011973 411 PSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLN---ECGQ--TMCDIHQ 457 (474)
Q Consensus 411 ~~~~~~~~~e~~~prr~~~Ac~a~~~v~alEgw~~~---e~G~--iv~~id~ 457 (474)
+-+-|+. |--+.|..+|+..+|--.+.+.|=|..+ |-|= +...+|+
T Consensus 338 GRLvNLa-~a~GHPs~VMd~SFanQaLa~~~L~~n~~~~~~~Vy~lP~~lD~ 388 (420)
T COG0499 338 GRLVNLA-AATGHPSEVMDMSFANQALAQIYLVKNHGKLEPGVYRLPKELDE 388 (420)
T ss_pred ceeeeec-cCCCCcHHHhhhhHHHHHHHHHHHHhcccccCCceeeCcHHHHH
Confidence 2366687 8899999999999999998888877766 4443 2355554
No 416
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=83.05 E-value=2.6 Score=43.53 Aligned_cols=136 Identities=18% Similarity=0.260 Sum_probs=76.9
Q ss_pred HcCCcEEEecccc---c-cccccccCceeeecCCCCcceeeecCChh-----HHHHHHhc---CcCCCcEEEEeccCCCc
Q 011973 243 AKGVKVISLGLLN---Q-GEELNRNGEIYLERQPNKLKIKVVDGSSL-----AAAVVVNS---LPKTTAHVLLRGTVTAN 310 (474)
Q Consensus 243 k~G~kV~~LG~ln---~-~e~ln~~g~l~v~k~p~~L~irvv~Gnsl-----taAvvl~~---ip~~~~~V~l~Gatg~~ 310 (474)
+-|=+|+.+|... . .|-.+-... .+.+.|+ .+-....-++ ||+..+.+ ++. ..+|++.||+|
T Consensus 80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~-~~~~~P~--~ls~~eAAal~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaG-- 153 (326)
T COG0604 80 KVGDRVAALGGVGRDGGYAEYVVVPAD-WLVPLPD--GLSFEEAAALPLAGLTAWLALFDRAGLKP-GETVLVHGAAG-- 153 (326)
T ss_pred CCCCEEEEccCCCCCCcceeEEEecHH-HceeCCC--CCCHHHHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEecCCc--
Confidence 4566777764110 0 233333333 2334466 2333334444 88888887 333 67899999998
Q ss_pred hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--ccc----c----CceeEEE--EcCcCChhhhh
Q 011973 311 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA----A----HKTKIWL--VGDDLTGKEQA 376 (474)
Q Consensus 311 kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~----~----~~~~vwi--vg~~i~~~eq~ 376 (474)
-||++..+.+...|..+.. .+.++.+ +.++++... .+..+ ++. + +..++++ ||...-.+-..
T Consensus 154 gVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~---vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~ 229 (326)
T COG0604 154 GVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADH---VINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLA 229 (326)
T ss_pred hHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCE---EEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHH
Confidence 9999999999899854333 6677777 555656554 22211 121 1 3456666 55444444444
Q ss_pred cCCCCceeeccc
Q 011973 377 RAPKGTIFIPYT 388 (474)
Q Consensus 377 ~a~~G~~f~~~~ 388 (474)
.+.+|-.++-+-
T Consensus 230 ~l~~~G~lv~ig 241 (326)
T COG0604 230 ALAPGGRLVSIG 241 (326)
T ss_pred HhccCCEEEEEe
Confidence 445555555444
No 417
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=82.83 E-value=3.8 Score=42.55 Aligned_cols=94 Identities=16% Similarity=0.197 Sum_probs=61.2
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEEEcCc---
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD--- 369 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg~~--- 369 (474)
..++|.++|.- .||+++|+.|...|.+|.. ++.+..... +-...+.++ ++++++++--.
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----------~~~~~~l~ell~~aDiVil~lP~t~ 210 (330)
T PRK12480 145 KNMTVAIIGTG---RIGAATAKIYAGFGATITAYDAYPNKDLDF-----------LTYKDSVKEAIKDADIISLHVPANK 210 (330)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----------hhccCCHHHHHhcCCEEEEeCCCcH
Confidence 34579999975 8999999999999999999 443321100 001123432 56666553333
Q ss_pred -----CChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973 370 -----LTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 404 (474)
Q Consensus 370 -----i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~ 404 (474)
+..+....+++|++++.++| ++.. +++ -|++..+-
T Consensus 211 ~t~~li~~~~l~~mk~gavlIN~aRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP 265 (330)
T PRK12480 211 ESYHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEA 265 (330)
T ss_pred HHHHHHhHHHHhcCCCCcEEEEcCCccccCHHHHHHHHHcCCeeEEEEeccCCCC
Confidence 34467778999999999999 5544 222 47777664
No 418
>PLN02858 fructose-bisphosphate aldolase
Probab=82.74 E-value=2.2 Score=52.37 Aligned_cols=178 Identities=12% Similarity=0.088 Sum_probs=101.5
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCcEEEeccccc-ccc-cc-ccCceee---ecC-CCCcceeeecCChhHHHH---HHhc
Q 011973 224 PWRREAINSLIEEAILEADAKGVKVISLGLLNQ-GEE-LN-RNGEIYL---ERQ-PNKLKIKVVDGSSLAAAV---VVNS 293 (474)
Q Consensus 224 ~~~~~~in~~Ie~Ai~~A~k~G~kV~~LG~ln~-~e~-ln-~~g~l~v---~k~-p~~L~irvv~GnsltaAv---vl~~ 293 (474)
.+..+-+.|-+.-|...|++.|+..-...+..+ .++ .+ |.|+.-. .|. .+.-.+++.+-|+---+. -.++
T Consensus 237 ~F~l~l~~KDl~la~~~A~~~g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (1378)
T PLN02858 237 GRFLNVLVQNLGIVLDMAKSLPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGVNILEAANRELYKPEDLAKQ 316 (1378)
T ss_pred CchhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCCCccccccccccChHHHHHH
Confidence 345566777788899999999998765444444 111 11 1111000 000 000001222222110000 0001
Q ss_pred C---cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE-
Q 011973 294 L---PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL- 365 (474)
Q Consensus 294 i---p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi- 365 (474)
+ +|..++|-++|-- .+|+++|+.|.+.|.+|.. |+.++.+.++++-. .. ..+.. . ++++++|
T Consensus 317 ~~~~~~~~~~IGfIGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga------~~-~~s~~e~~~~aDvVi~ 386 (1378)
T PLN02858 317 ITMQAKPVKRIGFIGLG---AMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGG------LA-GNSPAEVAKDVDVLVI 386 (1378)
T ss_pred hhccccCCCeEEEECch---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC------ee-cCCHHHHHhcCCEEEE
Confidence 0 3445789999854 9999999999999999988 88888888876510 01 12332 2 5565544
Q ss_pred -Ec------CcCC-hh-hhhcCCCCceeecccccCccCC----------CCCeeeecCCccccCC
Q 011973 366 -VG------DDLT-GK-EQARAPKGTIFIPYTQIPPRKL----------RKDCFYHSTPAMIIPP 411 (474)
Q Consensus 366 -vg------~~i~-~~-eq~~a~~G~~f~~~~~v~p~~~----------R~dc~y~~~~am~vP~ 411 (474)
|. +.+. +. -...+++|.++++.|-++|... +++..|.+.|.+--|.
T Consensus 387 ~V~~~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~ 451 (1378)
T PLN02858 387 MVANEVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVK 451 (1378)
T ss_pred ecCChHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChh
Confidence 32 1121 11 1234589999999999888722 1688899999876655
No 419
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=82.51 E-value=3.7 Score=40.36 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=35.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
....|++.|++| .+|.++++.+...|.++.. ++.++.+.+++
T Consensus 162 ~~~~vlI~ga~g--~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 205 (332)
T cd08259 162 KGDTVLVTGAGG--GVGIHAIQLAKALGARVIAVTRSPEKLKILKE 205 (332)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 356899999998 9999999999999999877 77777777744
No 420
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=82.43 E-value=1.7 Score=44.62 Aligned_cols=28 Identities=21% Similarity=0.270 Sum_probs=25.1
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcE--EEe
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIK--VAT 329 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~--v~l 329 (474)
+|.++|||| .||+++|..|+..|.. |.+
T Consensus 2 kI~IiGatG--~vG~~~a~~l~~~g~~~~v~l 31 (309)
T cd05294 2 KVSIIGASG--RVGSATALLLAKEDVVKEINL 31 (309)
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCEEEE
Confidence 689999999 9999999999988876 666
No 421
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=82.31 E-value=3.5 Score=43.65 Aligned_cols=29 Identities=31% Similarity=0.286 Sum_probs=26.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.+.|+++|+. ++|.++|+.|.++|.+|++
T Consensus 5 ~k~v~iiG~g---~~G~~~A~~l~~~G~~V~~ 33 (450)
T PRK14106 5 GKKVLVVGAG---VSGLALAKFLKKLGAKVIL 33 (450)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence 4789999977 7999999999999999999
No 422
>PLN02206 UDP-glucuronate decarboxylase
Probab=82.26 E-value=1.6 Score=47.01 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=28.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
+..+|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 118 ~~~kILVTGatG--fIGs~Lv~~Ll~~G~~V~~ 148 (442)
T PLN02206 118 KGLRVVVTGGAG--FVGSHLVDRLMARGDSVIV 148 (442)
T ss_pred CCCEEEEECccc--HHHHHHHHHHHHCcCEEEE
Confidence 346899999999 9999999999999999987
No 423
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=82.25 E-value=17 Score=37.97 Aligned_cols=164 Identities=19% Similarity=0.228 Sum_probs=97.2
Q ss_pred HHHcCCcEEEeccc----ccccc-------ccccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973 241 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 291 (474)
Q Consensus 241 A~k~G~kV~~LG~l----n~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl 291 (474)
+.++|.+++.|+.= .++|. |....-+.+.|+|+ ..+++|+.|.+ +=+.++.
T Consensus 67 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iviR~~~~~~~~~~a~~s~vPVINa~~~~~HPtQaL~Dl~Ti~ 146 (332)
T PRK04284 67 AYDQGAHVTYLGPTGSQMGKKESTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAK 146 (332)
T ss_pred HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEecCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 45699999999653 34555 35566677888877 35688888654 1245666
Q ss_pred hcC-c-CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeecccc-c-Cc
Q 011973 292 NSL-P-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLSTSYA-A-HK 360 (474)
Q Consensus 292 ~~i-p-~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~t~~~-~-~~ 360 (474)
+.+ . -+..+|+++|... +.+++..+..|++-|.++.+-.++.| ++.+ +...+.+..+...++.+ + ++
T Consensus 147 e~~~g~l~g~kia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~~~~~g~~~~~~~d~~ea~~~ 224 (332)
T PRK04284 147 EHLKKPYKDIKFTYVGDGR-NNVANALMQGAAIMGMDFHLVCPKELNPDDELLNKCK-EIAAETGGKITITDDIDEGVKG 224 (332)
T ss_pred HHhcCCcCCcEEEEecCCC-cchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHH-HHHHHcCCeEEEEcCHHHHhCC
Confidence 653 2 2457999999862 36899999999999999999333322 2222 11223333322223444 4 88
Q ss_pred eeEEEEcCcCChhhhhc--CCCCceeecccccCcc---CCC-CCee-eecCCcc
Q 011973 361 TKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR---KLR-KDCF-YHSTPAM 407 (474)
Q Consensus 361 ~~vwivg~~i~~~eq~~--a~~G~~f~~~~~v~p~---~~R-~dc~-y~~~~am 407 (474)
++|+..+.|.+..+... ...-..|-+| |++++ ..+ +|+. .|.+|+.
T Consensus 225 aDvvy~~~w~~~~~~~~~~~~~~~~~~~y-~v~~e~l~~a~~~~~ivmHplP~~ 277 (332)
T PRK04284 225 SDVIYTDVWVSMGEPDEVWEERIKLLKPY-QVNKEMMKKTGNPNAIFEHCLPSF 277 (332)
T ss_pred CCEEEECCcccCccchhhHHHHHHhccCC-cCCHHHHhhcCCCCcEEECCCCCC
Confidence 88877765543221000 0000223445 38877 345 4776 5788864
No 424
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=82.23 E-value=1.3 Score=44.80 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=25.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
++|+|+|+|| -||+++++.|+++|.+++.
T Consensus 2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v~ 30 (355)
T PRK10217 2 RKILITGGAG--FIGSALVRYIINETSDAVV 30 (355)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHHcCCCEEE
Confidence 5799999999 9999999999999977543
No 425
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=82.03 E-value=1.2 Score=46.10 Aligned_cols=25 Identities=8% Similarity=0.199 Sum_probs=22.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCc
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGI 325 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v 325 (474)
.+|.++||+| .||+.+|..|+.+|+
T Consensus 3 ~KV~IiGa~G--~VG~~~a~~l~~~~~ 27 (322)
T cd01338 3 VRVAVTGAAG--QIGYSLLFRIASGEM 27 (322)
T ss_pred eEEEEECCCc--HHHHHHHHHHHhccc
Confidence 4799999998 999999999997777
No 426
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=82.00 E-value=2 Score=43.68 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=29.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhcc-CcEEEe--cchhhHH
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE 336 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l--~~~~~~~ 336 (474)
.+|+|+|+|| =||+.+|+.|.++ |.+|.. |+.++..
T Consensus 2 ~~ilVtGatG--fiGs~l~~~L~~~~~~~V~~~~r~~~~~~ 40 (347)
T PRK11908 2 KKVLILGVNG--FIGHHLSKRILETTDWEVYGMDMQTDRLG 40 (347)
T ss_pred cEEEEECCCc--HHHHHHHHHHHhCCCCeEEEEeCcHHHHH
Confidence 3699999999 9999999999865 688886 5555443
No 427
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=82.00 E-value=4.2 Score=40.75 Aligned_cols=85 Identities=12% Similarity=0.195 Sum_probs=56.6
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec--ccc-c------CceeEEE-
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA-A------HKTKIWL- 365 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~~-~------~~~~vwi- 365 (474)
..|++.|++| -||.++++.+...|. +|.. +++++.+.++++++... ++... +.. . ...++++
T Consensus 156 ~~VlI~ga~g--~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~---vi~~~~~~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 156 QTMVVSGAAG--ACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA---AINYKTDNVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE---EEECCCCCHHHHHHHHCCCCceEEEE
Confidence 7899999998 999999998888898 6766 78888888888765533 33222 111 1 2356666
Q ss_pred -EcCcCChhhhhcCCCCceeeccc
Q 011973 366 -VGDDLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 366 -vg~~i~~~eq~~a~~G~~f~~~~ 388 (474)
+|.....+-...+.+|-+++.+.
T Consensus 231 ~~g~~~~~~~~~~l~~~G~iv~~G 254 (345)
T cd08293 231 NVGGEISDTVISQMNENSHIILCG 254 (345)
T ss_pred CCCcHHHHHHHHHhccCCEEEEEe
Confidence 33322344445567777777765
No 428
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=81.99 E-value=4.1 Score=39.68 Aligned_cols=98 Identities=16% Similarity=0.121 Sum_probs=60.2
Q ss_pred hHHHHHHhcCc--CCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cc-cc
Q 011973 285 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SY-AA 358 (474)
Q Consensus 285 ltaAvvl~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t-~~-~~ 358 (474)
+||+..+..+- +....|++.|+.| .+|.++++.+..+|.+|.. +++++.+.++ +++... ++..+ +. +.
T Consensus 128 ~ta~~~l~~~~~~~~g~~vlV~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~ 201 (320)
T cd08243 128 YTAWGSLFRSLGLQPGDTLLIRGGTS--SVGLAALKLAKALGATVTATTRSPERAALLK-ELGADE---VVIDDGAIAEQ 201 (320)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE---EEecCccHHHH
Confidence 45555555442 2357999999988 9999999999999999877 6777777774 333322 22111 11 11
Q ss_pred -----CceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 011973 359 -----HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 359 -----~~~~vwi--vg~~i~~~eq~~a~~G~~f~~~~ 388 (474)
+..++++ +|.....+-.+.++++-+|+.+.
T Consensus 202 i~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g 238 (320)
T cd08243 202 LRAAPGGFDKVLELVGTATLKDSLRHLRPGGIVCMTG 238 (320)
T ss_pred HHHhCCCceEEEECCChHHHHHHHHHhccCCEEEEEc
Confidence 2345555 33333344445666777777766
No 429
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=81.99 E-value=5.6 Score=38.40 Aligned_cols=42 Identities=17% Similarity=0.189 Sum_probs=35.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
....|++.|++| .+|.++++.+...|.+|.. ++.++.+.+++
T Consensus 139 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 182 (323)
T cd08241 139 PGETVLVLGAAG--GVGLAAVQLAKALGARVIAAASSEEKLALARA 182 (323)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH
Confidence 356899999987 9999999999999999887 67777777754
No 430
>PRK06223 malate dehydrogenase; Reviewed
Probab=81.85 E-value=3.4 Score=41.79 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=40.6
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHhh----Cccccccceeeec-cccc-CceeEEEE
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLR----IPVEAQHNLVLST-SYAA-HKTKIWLV 366 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~~----~~~~~~~~l~~~t-~~~~-~~~~vwiv 366 (474)
.+|.++|+ | .+|+++|..|++.|. .|.+ +++++.+....+ .........+..+ ++++ ++++++|+
T Consensus 3 ~KI~VIGa-G--~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii 76 (307)
T PRK06223 3 KKISIIGA-G--NVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVI 76 (307)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEE
Confidence 47999999 7 999999999998876 7777 666655433222 1111111123333 5555 88877663
No 431
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=81.79 E-value=3 Score=35.44 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=32.7
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~ 342 (474)
|+++|.. .+|+.+++.|.+.+.+|++ +++++.++++++-
T Consensus 1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~ 41 (116)
T PF02254_consen 1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREEG 41 (116)
T ss_dssp EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT
T ss_pred eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc
Confidence 6789987 8999999999998878888 8888888887763
No 432
>PLN02240 UDP-glucose 4-epimerase
Probab=81.67 E-value=1.7 Score=43.82 Aligned_cols=29 Identities=21% Similarity=0.288 Sum_probs=27.3
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
++|+|+|+|| -||+++++.|.++|.+|+.
T Consensus 6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~ 34 (352)
T PLN02240 6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVV 34 (352)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEE
Confidence 5799999999 9999999999999999987
No 433
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=81.56 E-value=7.7 Score=42.10 Aligned_cols=162 Identities=17% Similarity=0.237 Sum_probs=96.0
Q ss_pred HHHcCCcEEEecc-----cccccc-------ccccCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 011973 241 ADAKGVKVISLGL-----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV 289 (474)
Q Consensus 241 A~k~G~kV~~LG~-----ln~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns----------ltaAv 289 (474)
+.++|..++.|+. +.++|. |..+.-+.+.|+|. ..+|+|+.+-+ +=..+
T Consensus 148 ~~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y~D~IviR~~~~~~~~e~A~~s~vPVINAgdg~~~HPtQaLaDl~T 227 (429)
T PRK11891 148 FCRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGYVDALVIRHPEQGSVAEFARATNLPVINGGDGPGEHPSQALLDLYT 227 (429)
T ss_pred HHHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHhCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHHHHHHHHH
Confidence 3489999999954 334554 45667778888876 45789998643 22456
Q ss_pred HHhcCc-----CCCcEEEEeccCCCchhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c
Q 011973 290 VVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A 358 (474)
Q Consensus 290 vl~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~-~v~v~l~~~~~~~---~l~~~~~~~~~~~l~~~t-~~~-~ 358 (474)
+.+... .+..+|+++|...-+.+++..+..|++. |.++.+-..+.|+ .+.+++. +.+.. +..+ +.+ +
T Consensus 228 i~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~~~~~~-~~G~~-v~~~~d~~ea 305 (429)
T PRK11891 228 IQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVEQIS-RNGHV-IEQTDDLAAG 305 (429)
T ss_pred HHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHH-hcCCe-EEEEcCHHHH
Confidence 666542 2357999999872128889999998975 9999883333332 2222221 12333 3233 443 4
Q ss_pred -CceeEEEEcCcCChhhhhcCCCCceeecccccCcc---C-CCCCee-eecCCc
Q 011973 359 -HKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---K-LRKDCF-YHSTPA 406 (474)
Q Consensus 359 -~~~~vwivg~~i~~~eq~~a~~G~~f~~~~~v~p~---~-~R~dc~-y~~~~a 406 (474)
++++|+...- +..|+......-..|-+| |++.+ . .++||. .|.+|+
T Consensus 306 v~~ADVVYt~~-~q~er~~~~~~~~~~~~y-~vt~ell~~~ak~dai~MHcLPr 357 (429)
T PRK11891 306 LRGADVVYATR-IQKERFADESFEGYTPDF-QINQALVDAVCKPDTLIMHPLPR 357 (429)
T ss_pred hCCCCEEEEcC-chhhcccCHHHHHhccCC-cCCHHHHhCccCCCcEEECCCCC
Confidence 8888888744 332222100001123345 38887 3 467876 567885
No 434
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=81.55 E-value=5.5 Score=44.06 Aligned_cols=137 Identities=15% Similarity=0.173 Sum_probs=83.5
Q ss_pred HHHcCCcEEEecccc------------ccccccccCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEeccCC
Q 011973 241 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT 308 (474)
Q Consensus 241 A~k~G~kV~~LG~ln------------~~e~ln~~g~l~v~k~p~~L~irvv~GnsltaAvvl~~ip~~~~~V~l~Gatg 308 (474)
..++|+.++++=.+. ++-++.|+..+...-| +--|+.+|..-++- ....++|+|.|+-
T Consensus 105 l~~~~it~ia~e~vpr~sraq~~d~lssma~IAGy~Av~~aa~---~~~~~~~g~~taaG------~~pg~kVlViGaG- 174 (509)
T PRK09424 105 LAARGVTVLAMDAVPRISRAQSLDALSSMANIAGYRAVIEAAH---EFGRFFTGQITAAG------KVPPAKVLVIGAG- 174 (509)
T ss_pred HHHcCCEEEEeecccccccCCCcccccchhhhhHHHHHHHHHH---HhcccCCCceeccC------CcCCCEEEEECCc-
Confidence 456788888865544 3444444433333322 22233333322221 2237899999998
Q ss_pred CchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-ccc-----------eeeec-cc--------cc--CceeE
Q 011973 309 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-QHN-----------LVLST-SY--------AA--HKTKI 363 (474)
Q Consensus 309 ~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~-~~~-----------l~~~t-~~--------~~--~~~~v 363 (474)
-||...+..+...|-+|.. ++.+|++..++ ++.+. ..+ ....+ .+ .+ +.+|+
T Consensus 175 --~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDV 251 (509)
T PRK09424 175 --VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDI 251 (509)
T ss_pred --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCE
Confidence 7999999999999998877 78888886665 44331 000 00011 11 10 34788
Q ss_pred EEEcCc---------CChhhhhcCCCCceeecccccC
Q 011973 364 WLVGDD---------LTGKEQARAPKGTIFIPYTQIP 391 (474)
Q Consensus 364 wivg~~---------i~~~eq~~a~~G~~f~~~~~v~ 391 (474)
+|-... ++++..+.+++|.++++++ ++
T Consensus 252 VIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg-~~ 287 (509)
T PRK09424 252 IITTALIPGKPAPKLITAEMVASMKPGSVIVDLA-AE 287 (509)
T ss_pred EEECCCCCcccCcchHHHHHHHhcCCCCEEEEEc-cC
Confidence 883333 3788999999999999999 65
No 435
>PLN02996 fatty acyl-CoA reductase
Probab=81.34 E-value=2 Score=46.90 Aligned_cols=25 Identities=12% Similarity=0.272 Sum_probs=22.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhcc
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQM 323 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~ 323 (474)
+.+.|+|+|+|| -||++++..|.+.
T Consensus 10 ~~k~VlvTGaTG--FlG~~ll~~LL~~ 34 (491)
T PLN02996 10 ENKTILVTGATG--FLAKIFVEKILRV 34 (491)
T ss_pred CCCeEEEeCCCc--HHHHHHHHHHHhh
Confidence 456899999999 9999999998864
No 436
>PLN02572 UDP-sulfoquinovose synthase
Probab=81.24 E-value=1.6 Score=46.73 Aligned_cols=30 Identities=27% Similarity=0.234 Sum_probs=28.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
.++|+|+|++| =||+.+|+.|.++|.+|.+
T Consensus 47 ~k~VLVTGatG--fIGs~Lv~~L~~~G~~V~~ 76 (442)
T PLN02572 47 KKKVMVIGGDG--YCGWATALHLSKRGYEVAI 76 (442)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence 56799999999 9999999999999999987
No 437
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=81.21 E-value=2.7 Score=41.62 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=36.8
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 344 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~ 344 (474)
.+-++++|+.. -||+|||..|++.|.+|.+ ++.+.-+.-...++.
T Consensus 14 sk~~~vtGg~s--GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g 60 (256)
T KOG1200|consen 14 SKVAAVTGGSS--GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG 60 (256)
T ss_pred cceeEEecCCc--hHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence 45667888875 8999999999999999999 666667777777666
No 438
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=81.13 E-value=1.9 Score=46.24 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=28.6
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
...+|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~mkILVTGatG--FIGs~Lv~~Ll~~G~~V~~ 149 (436)
T PLN02166 119 KRLRIVVTGGAG--FVGSHLVDKLIGRGDEVIV 149 (436)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 456899999999 9999999999999999987
No 439
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=81.10 E-value=4.4 Score=40.05 Aligned_cols=88 Identities=15% Similarity=0.176 Sum_probs=55.7
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc-cc------CceeEEE-
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY-AA------HKTKIWL- 365 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~-~~------~~~~vwi- 365 (474)
...|++.|++| .+|.++++.+.+.|.+++. ++.++.+.+++.++... ++... ++ +. ...++++
T Consensus 146 ~~~vlI~g~~g--~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~v~~~~~~~~d~vi~ 220 (329)
T cd05288 146 GETVVVSAAAG--AVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDA---AINYKTPDLAEALKEAAPDGIDVYFD 220 (329)
T ss_pred CCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCce---EEecCChhHHHHHHHhccCCceEEEE
Confidence 47899999988 9999999999999999877 77788888776444322 22111 11 11 2345555
Q ss_pred -EcCcCChhhhhcCCCCceeeccccc
Q 011973 366 -VGDDLTGKEQARAPKGTIFIPYTQI 390 (474)
Q Consensus 366 -vg~~i~~~eq~~a~~G~~f~~~~~v 390 (474)
+|...-.+-...++++-+|+.+...
T Consensus 221 ~~g~~~~~~~~~~l~~~G~~v~~g~~ 246 (329)
T cd05288 221 NVGGEILDAALTLLNKGGRIALCGAI 246 (329)
T ss_pred cchHHHHHHHHHhcCCCceEEEEeec
Confidence 3332222334456677778877643
No 440
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=80.95 E-value=5.5 Score=40.13 Aligned_cols=84 Identities=7% Similarity=0.164 Sum_probs=52.5
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCccccccceeeeccccc--CceeEEE-----
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----- 365 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v----~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi----- 365 (474)
.+|.++|. | .+|.++++.|.+.|. ++.. |++++++.++++.+- . . .++.++ ++++++|
T Consensus 3 ~~IgfIG~-G--~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~----~-~-~~~~~e~~~~aDiIiLavkP 73 (272)
T PRK12491 3 KQIGFIGC-G--NMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGI----T-I-TTNNNEVANSADILILSIKP 73 (272)
T ss_pred CeEEEECc-c--HHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCc----E-E-eCCcHHHHhhCCEEEEEeCh
Confidence 46899995 5 999999999998774 5666 778888888765431 1 1 123322 5666655
Q ss_pred --EcCcCChhhhh-cCCCCceeecccc-cCcc
Q 011973 366 --VGDDLTGKEQA-RAPKGTIFIPYTQ-IPPR 393 (474)
Q Consensus 366 --vg~~i~~~eq~-~a~~G~~f~~~~~-v~p~ 393 (474)
+.+.+ ++.. ..+++++++++.- ++-+
T Consensus 74 ~~~~~vl--~~l~~~~~~~~lvISi~AGi~i~ 103 (272)
T PRK12491 74 DLYSSVI--NQIKDQIKNDVIVVTIAAGKSIK 103 (272)
T ss_pred HHHHHHH--HHHHHhhcCCcEEEEeCCCCcHH
Confidence 22222 1221 1457788888875 5444
No 441
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=80.81 E-value=2.3 Score=42.73 Aligned_cols=39 Identities=10% Similarity=0.175 Sum_probs=33.8
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
++|.++|+. .+|+++|..|++.|.+|++ ++++++++.++
T Consensus 4 ~~I~ViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 4 KVIGVVGSG---VMGQGIAQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred cEEEEECcc---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 579999996 8999999999999999999 78888776544
No 442
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=80.79 E-value=1.5 Score=43.44 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=24.0
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
|+|+||+| =||+.+|+.|.++|.++..
T Consensus 2 ilVtGa~G--fiG~~l~~~L~~~g~~~v~ 28 (308)
T PRK11150 2 IIVTGGAG--FIGSNIVKALNDKGITDIL 28 (308)
T ss_pred EEEecCCc--HHHHHHHHHHHhCCCceEE
Confidence 79999999 9999999999999985443
No 443
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=80.74 E-value=2 Score=40.64 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=24.4
Q ss_pred EEEEeccCCCchhHHHHHHHHhcc--CcEEEe
Q 011973 300 HVLLRGTVTANKVANAVASSLCQM--GIKVAT 329 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~--~v~v~l 329 (474)
+|+++|++| -||+++|+.|+++ ++.+.+
T Consensus 2 ~vlItGas~--gIG~~ia~~l~~~~~~~~v~~ 31 (235)
T PRK09009 2 NILIVGGSG--GIGKAMVKQLLERYPDATVHA 31 (235)
T ss_pred EEEEECCCC--hHHHHHHHHHHHhCCCCEEEE
Confidence 689999998 9999999999987 466665
No 444
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=80.69 E-value=8.9 Score=40.98 Aligned_cols=90 Identities=14% Similarity=0.093 Sum_probs=59.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-------------ccceeeecccccCceeE
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-------------QHNLVLSTSYAAHKTKI 363 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~-------------~~~l~~~t~~~~~~~~v 363 (474)
.+|.++|.. -+|...|..|++.|.+|+. +++++.+.++....... ...+...+.. +++++
T Consensus 4 ~kI~VIGlG---~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~--~~aDv 78 (415)
T PRK11064 4 ETISVIGLG---YIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTP--EPADA 78 (415)
T ss_pred cEEEEECcc---hhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeeccc--ccCCE
Confidence 579999975 8999999999999999998 88999998875522110 1111111111 24444
Q ss_pred --EEEcCcCCh-------------hh-hhcCCCCceeecccccCcc
Q 011973 364 --WLVGDDLTG-------------KE-QARAPKGTIFIPYTQIPPR 393 (474)
Q Consensus 364 --wivg~~i~~-------------~e-q~~a~~G~~f~~~~~v~p~ 393 (474)
..|+...++ ++ ...+++|++++.-|-+||.
T Consensus 79 vii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pg 124 (415)
T PRK11064 79 FLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSPVG 124 (415)
T ss_pred EEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 346654211 11 2236899999999988886
No 445
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=80.56 E-value=4.2 Score=41.81 Aligned_cols=84 Identities=17% Similarity=0.151 Sum_probs=58.2
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 366 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-------- 366 (474)
..++|-++|-- .||+++|+.|.--|-+|+-.++.. . .+ +. . +...++++ +.+|++++
T Consensus 144 ~gktvGIiG~G---~IG~~vA~~~~~fgm~V~~~d~~~--~--~~---~~--~-~~~~~l~ell~~sDvv~lh~Plt~~T 210 (311)
T PRK08410 144 KGKKWGIIGLG---TIGKRVAKIAQAFGAKVVYYSTSG--K--NK---NE--E-YERVSLEELLKTSDIISIHAPLNEKT 210 (311)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhhcCCEEEEECCCc--c--cc---cc--C-ceeecHHHHhhcCCEEEEeCCCCchh
Confidence 46789999974 899999999999999998833210 0 00 00 0 11224543 66666552
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973 367 GDDLTGKEQARAPKGTIFIPYTQ---IPPR 393 (474)
Q Consensus 367 g~~i~~~eq~~a~~G~~f~~~~~---v~p~ 393 (474)
-..|+.++..+||||++||-++| |+.+
T Consensus 211 ~~li~~~~~~~Mk~~a~lIN~aRG~vVDe~ 240 (311)
T PRK08410 211 KNLIAYKELKLLKDGAILINVGRGGIVNEK 240 (311)
T ss_pred hcccCHHHHHhCCCCeEEEECCCccccCHH
Confidence 24578889999999999999999 6665
No 446
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=80.52 E-value=1.7 Score=42.33 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=26.1
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
+|+|+|+|| -||+++++.|.++|.+|..
T Consensus 1 kilv~G~tG--~iG~~l~~~l~~~g~~v~~ 28 (287)
T TIGR01214 1 RILITGANG--QLGRELVQQLSPEGRVVVA 28 (287)
T ss_pred CEEEEcCCC--HHHHHHHHHHHhcCCEEEE
Confidence 489999999 9999999999999999887
No 447
>PLN02602 lactate dehydrogenase
Probab=80.38 E-value=1.6 Score=45.97 Aligned_cols=64 Identities=22% Similarity=0.348 Sum_probs=41.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc----ccceeee-ccccc-CceeEEEE
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA----QHNLVLS-TSYAA-HKTKIWLV 366 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~----~~~l~~~-t~~~~-~~~~vwiv 366 (474)
.+|.++|+ | .||+++|..|+.+++ .+.| .++++.+-...++..-. ... +.. ++|+. ++++|+|+
T Consensus 38 ~KI~IIGa-G--~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~~dy~~~~daDiVVi 111 (350)
T PLN02602 38 TKVSVVGV-G--NVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILASTDYAVTAGSDLCIV 111 (350)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeCCCHHHhCCCCEEEE
Confidence 69999997 7 999999999996676 3444 56665554444432211 112 323 25555 88888775
No 448
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=80.37 E-value=2.3 Score=45.78 Aligned_cols=62 Identities=27% Similarity=0.289 Sum_probs=46.5
Q ss_pred eeeecCChhHHHHHH-hcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 277 IKVVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 277 irvv~GnsltaAvvl-~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
++.++|.+--+++=. +.-..+...|+|+|||| ++|+=+.+.|-++|..|.. |++++-+++-.
T Consensus 57 ~~~~~~~~~e~~v~~~~~~~~~~~~VlVvGatG--~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 57 ISPVTGTTSEAEVSPPNNNSKKPTTVLVVGATG--KVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCccccccceeeeccCCCCCCCCCeEEEecCCC--chhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 566666665554432 22233677999999999 9999999999999988887 88887776655
No 449
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=80.12 E-value=4.5 Score=42.49 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=28.5
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
...|+|+|+.| =||+.++..|-++|..|++
T Consensus 2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~ 31 (343)
T KOG1371|consen 2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVI 31 (343)
T ss_pred CcEEEEecCCc--ceehHHHHHHHhCCCcEEE
Confidence 36899999999 9999999999999999999
No 450
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=80.06 E-value=8.6 Score=37.28 Aligned_cols=86 Identities=15% Similarity=0.203 Sum_probs=55.9
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc-c---c----CceeEEE
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY-A---A----HKTKIWL 365 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~-~---~----~~~~vwi 365 (474)
.+.|++.|++| .+|.++++.+..+|.++.. ++.++.+.+++ .+.. .++... +. + . ..+++++
T Consensus 145 ~~~vli~g~~~--~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi 218 (328)
T cd08268 145 GDSVLITAASS--SVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAA---HVIVTDEEDLVAEVLRITGGKGVDVVF 218 (328)
T ss_pred CCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCC---EEEecCCccHHHHHHHHhCCCCceEEE
Confidence 46899999987 9999999999999999888 77778777743 3321 122111 11 0 1 2456666
Q ss_pred --EcCcCChhhhhcCCCCceeecccc
Q 011973 366 --VGDDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 366 --vg~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
+|.....+-...++++-.|+.+++
T Consensus 219 ~~~~~~~~~~~~~~l~~~g~~v~~g~ 244 (328)
T cd08268 219 DPVGGPQFAKLADALAPGGTLVVYGA 244 (328)
T ss_pred ECCchHhHHHHHHhhccCCEEEEEEe
Confidence 344444444556777778887764
No 451
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=80.04 E-value=2.1 Score=44.49 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=26.7
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCcE-EEe---cchhhHH
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT---ICKDDYE 336 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v~-v~l---~~~~~~~ 336 (474)
.+|.|+|| | .||+++|..|..++.. .+. .++++.+
T Consensus 1 ~KVaviGa-G--~VG~s~a~~l~~~~~~~el~LiDi~~~~~~ 39 (313)
T COG0039 1 MKVAVIGA-G--NVGSSLAFLLLLQGLGSELVLIDINEEKAE 39 (313)
T ss_pred CeEEEECC-C--hHHHHHHHHHhcccccceEEEEEccccccc
Confidence 37999999 8 9999999999977776 333 5544444
No 452
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=79.91 E-value=4 Score=45.05 Aligned_cols=100 Identities=19% Similarity=0.206 Sum_probs=64.2
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 366 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-------- 366 (474)
..++|.++|-- .||+++|+.|...|.+|...+...-.+-..+... ..++++++ ++++++++
T Consensus 137 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~------~~~~~l~ell~~aDvV~l~lPlt~~T 207 (525)
T TIGR01327 137 YGKTLGVIGLG---RIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGV------ELVDDLDELLARADFITVHTPLTPET 207 (525)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCC------EEcCCHHHHHhhCCEEEEccCCChhh
Confidence 45789999975 8999999999999999988222100011111111 11224443 56666552
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecCC
Q 011973 367 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP 405 (474)
Q Consensus 367 g~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~~ 405 (474)
-..++.+....|++|++++.++| ++.. +++ -|++..+-+
T Consensus 208 ~~li~~~~l~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gAaLDVf~~EP~ 261 (525)
T TIGR01327 208 RGLIGAEELAKMKKGVIIVNCARGGIIDEAALYEALEEGHVRAAALDVFEKEPP 261 (525)
T ss_pred ccCcCHHHHhcCCCCeEEEEcCCCceeCHHHHHHHHHcCCeeEEEEecCCCCCC
Confidence 23456788999999999999999 4433 444 677776643
No 453
>PRK06436 glycerate dehydrogenase; Provisional
Probab=79.90 E-value=3.9 Score=42.08 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=53.6
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEE--------E
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------V 366 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwi--------v 366 (474)
..++|.++|-- .||+++|+.|...|.+|...++.. ++ .+. . ....++++ +.+++++ .
T Consensus 121 ~gktvgIiG~G---~IG~~vA~~l~afG~~V~~~~r~~----~~---~~~--~-~~~~~l~ell~~aDiv~~~lp~t~~T 187 (303)
T PRK06436 121 YNKSLGILGYG---GIGRRVALLAKAFGMNIYAYTRSY----VN---DGI--S-SIYMEPEDIMKKSDFVLISLPLTDET 187 (303)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCCC----cc---cCc--c-cccCCHHHHHhhCCEEEECCCCCchh
Confidence 46789999974 999999998878899998822210 00 000 0 00123432 5565544 2
Q ss_pred cCcCChhhhhcCCCCceeecccc
Q 011973 367 GDDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 367 g~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
-..++.+.+..+++|++||.++|
T Consensus 188 ~~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 188 RGMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred hcCcCHHHHhcCCCCeEEEECCC
Confidence 33567888999999999999999
No 454
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=79.89 E-value=3.1 Score=42.82 Aligned_cols=64 Identities=16% Similarity=0.251 Sum_probs=40.8
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc----cc-eeeeccccc-CceeEEEE
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ----HN-LVLSTSYAA-HKTKIWLV 366 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v--~v~l--~~~~~~~~l~~~~~~~~~----~~-l~~~t~~~~-~~~~vwiv 366 (474)
+|.++|+ | .||+++|..|+.+++ .+.| .++++.+-....+..... .+ .+..++|++ ++++|+|+
T Consensus 1 Ki~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvi 74 (307)
T cd05290 1 KLVVIGA-G--HVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVI 74 (307)
T ss_pred CEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEE
Confidence 4789999 7 999999999997776 3455 566655544444333221 12 133445665 88888764
No 455
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=79.87 E-value=2.5 Score=41.93 Aligned_cols=63 Identities=17% Similarity=0.266 Sum_probs=42.2
Q ss_pred EEEeccCCCchhHHHHHHHHhccC----cEEEe--cchhhHHHHHhhCcccc----ccceeeecc--ccc-CceeEEEE
Q 011973 301 VLLRGTVTANKVANAVASSLCQMG----IKVAT--ICKDDYEKLKLRIPVEA----QHNLVLSTS--YAA-HKTKIWLV 366 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~----v~v~l--~~~~~~~~l~~~~~~~~----~~~l~~~t~--~~~-~~~~vwiv 366 (474)
|.++||.| .+|+.+|..|+..| .++.| .++++++....++..-. ..+ +..++ +++ ++++++|.
T Consensus 1 I~IIGagG--~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~-i~~~~d~~~~~~~aDiVv~ 76 (263)
T cd00650 1 IAVIGAGG--NVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIK-VSITDDPYEAFKDADVVII 76 (263)
T ss_pred CEEECCCC--hHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcE-EEECCchHHHhCCCCEEEE
Confidence 57899987 89999999999888 67887 66666665555432211 112 33444 345 88888764
No 456
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=79.80 E-value=2.2 Score=42.90 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=23.0
Q ss_pred EEeccCCCchhHHHHHHHHhccC--cEEEe
Q 011973 302 LLRGTVTANKVANAVASSLCQMG--IKVAT 329 (474)
Q Consensus 302 ~l~Gatg~~kig~ava~~L~~~~--v~v~l 329 (474)
+|+|++| =||+.+++.|.++| .+|..
T Consensus 1 LVTGgsG--flG~~iv~~Ll~~g~~~~Vr~ 28 (280)
T PF01073_consen 1 LVTGGSG--FLGSHIVRQLLERGYIYEVRV 28 (280)
T ss_pred CEEcCCc--HHHHHHHHHHHHCCCceEEEE
Confidence 5899999 99999999999999 56655
No 457
>PLN02306 hydroxypyruvate reductase
Probab=79.50 E-value=4.5 Score=43.12 Aligned_cols=94 Identities=11% Similarity=0.111 Sum_probs=59.0
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHh-ccCcEEEe--cch-hhHHHHHhhCcc----ccc--cceeeeccccc--CceeEE
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICK-DDYEKLKLRIPV----EAQ--HNLVLSTSYAA--HKTKIW 364 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l--~~~-~~~~~l~~~~~~----~~~--~~l~~~t~~~~--~~~~vw 364 (474)
..++|-++|.- .||+++|+.|+ --|.+|+. ++. ++.+......+. ... .......++++ +.+|++
T Consensus 164 ~gktvGIiG~G---~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV 240 (386)
T PLN02306 164 KGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVI 240 (386)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEE
Confidence 46789999976 89999999997 78999987 222 112111111110 000 00011224543 667776
Q ss_pred EE--------cCcCChhhhhcCCCCceeecccc---cCcc
Q 011973 365 LV--------GDDLTGKEQARAPKGTIFIPYTQ---IPPR 393 (474)
Q Consensus 365 iv--------g~~i~~~eq~~a~~G~~f~~~~~---v~p~ 393 (474)
++ -..|+.++..+|++|++||-++| |+..
T Consensus 241 ~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVDe~ 280 (386)
T PLN02306 241 SLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVIDEV 280 (386)
T ss_pred EEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccCHH
Confidence 53 23577888999999999999999 5554
No 458
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=79.35 E-value=3.4 Score=47.26 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=32.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHH
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 337 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~ 337 (474)
.-++|.|+||- -+|+.||..+++.|++|++ .+.+.+++
T Consensus 312 ~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~ 351 (715)
T PRK11730 312 PVKQAAVLGAG---IMGGGIAYQSASKGVPVIMKDINQKALDL 351 (715)
T ss_pred ccceEEEECCc---hhHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 34689999998 7999999999999999999 67666554
No 459
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=79.34 E-value=3.1 Score=42.28 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=32.0
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 339 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~ 339 (474)
+|.++| .| -+|+++|..|++.|.+|++ ++++..+..+
T Consensus 4 ~V~VIG-~G--~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 4 SVAIIG-AG--LIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred EEEEEC-cc--HHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 699999 55 9999999999999999999 7777777654
No 460
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=79.26 E-value=2.6 Score=42.33 Aligned_cols=92 Identities=20% Similarity=0.276 Sum_probs=59.3
Q ss_pred hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc-c-CceeEEE--EcC--cCCh-----hh-hh
Q 011973 311 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGD--DLTG-----KE-QA 376 (474)
Q Consensus 311 kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg~--~i~~-----~e-q~ 376 (474)
.+|.++|+.|++.|.+|.+ |++++.+.+++. +. . . .++.+ . ++++++| |-+ .+.. +. ..
T Consensus 6 ~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~---g~--~-~-~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~ 78 (288)
T TIGR01692 6 NMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA---GA--Q-A-AASPAEAAEGADRVITMLPAGQHVISVYSGDEGILP 78 (288)
T ss_pred HhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc---CC--e-e-cCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhh
Confidence 8999999999999999998 888888888654 11 1 1 11332 2 5565544 221 1111 11 22
Q ss_pred cCCCCceeecccccCcc---CC----C-CCeeeecCCcccc
Q 011973 377 RAPKGTIFIPYTQIPPR---KL----R-KDCFYHSTPAMII 409 (474)
Q Consensus 377 ~a~~G~~f~~~~~v~p~---~~----R-~dc~y~~~~am~v 409 (474)
.+++|+++++.|-++|. ++ + +...|.+.|.+--
T Consensus 79 ~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vdaPv~Gg 119 (288)
T TIGR01692 79 KVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGG 119 (288)
T ss_pred cCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEECCCCCC
Confidence 56899999999998886 11 1 4566888776643
No 461
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=78.62 E-value=4.2 Score=39.96 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=33.2
Q ss_pred EEEEeccCCCchhHHHHHHHHhccC---cEEEe--cchhhHHHHHhhC
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLKLRI 342 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~---v~v~l--~~~~~~~~l~~~~ 342 (474)
+|.++|. | .+|.++|+.|.+.| .+|.+ |++++.+.++++.
T Consensus 4 ~I~iIG~-G--~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~ 48 (267)
T PRK11880 4 KIGFIGG-G--NMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY 48 (267)
T ss_pred EEEEEec-h--HHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc
Confidence 6899997 6 99999999999888 56666 8888888887753
No 462
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=78.61 E-value=8 Score=40.59 Aligned_cols=162 Identities=15% Similarity=0.318 Sum_probs=94.2
Q ss_pred HHHcCCcEEE-ecc----cccccc-------ccccCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 011973 241 ADAKGVKVIS-LGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV 289 (474)
Q Consensus 241 A~k~G~kV~~-LG~----ln~~e~-------ln~~g~l~v~k~p~---------~L~irvv~Gns----------ltaAv 289 (474)
+.++|.+++. ++. +.++|. |.+..-+.+.|+|+ ..+|+|+.+-+ +=+.+
T Consensus 66 ~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y~D~IviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQaLaDl~T 145 (338)
T PRK08192 66 FNLLGGHVRETTGMASSSLSKGESLYDTARVLSTYSDVIAMRHPDAGSVKEFAEGSRVPVINGGDGSNEHPTQALLDLFT 145 (338)
T ss_pred HHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHcCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHHHHHHHHH
Confidence 5689999997 452 444554 45667778889887 24588887533 13567
Q ss_pred HHhcC-----cCCCcEEEEeccCCCchhHHHHHHHHh-ccCcEEEecchhhHH---HHHhhCccccccceeeec-ccc-c
Q 011973 290 VVNSL-----PKTTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A 358 (474)
Q Consensus 290 vl~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l~~~~~~~---~l~~~~~~~~~~~l~~~t-~~~-~ 358 (474)
+.+.. ..+..+|+++|...-+.++...+..|+ ..|..+.+-.++.|+ .+-+++. +.+.. +..+ +.+ +
T Consensus 146 i~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~ea 223 (338)
T PRK08192 146 IQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKELAMPDYVISDIE-NAGHK-ITITDQLEGN 223 (338)
T ss_pred HHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCccccCCHHHHHHHH-HcCCe-EEEEcCHHHH
Confidence 77754 124579999998721278888888888 559999884444443 2211111 12233 3344 444 4
Q ss_pred -CceeEEEEcCcCChhhhhcCCCCceeec-ccccCcc---C-CCCCeee-ecCCc
Q 011973 359 -HKTKIWLVGDDLTGKEQARAPKGTIFIP-YTQIPPR---K-LRKDCFY-HSTPA 406 (474)
Q Consensus 359 -~~~~vwivg~~i~~~eq~~a~~G~~f~~-~~~v~p~---~-~R~dc~y-~~~~a 406 (474)
++++|+... .+..|+..+...-..|.+ | |+..+ + .++|+.+ |.+|+
T Consensus 224 ~~~aDvvyt~-~~q~e~~~~~~~~~~~~~~y-~v~~e~l~~~a~~~ai~mHcLP~ 276 (338)
T PRK08192 224 LDKADILYLT-RIQEERFPSQEEANKYRGKF-RLNQSIYTQHCKSNTVIMHPLPR 276 (338)
T ss_pred HccCCEEEEc-CcccccccchHHHHHhhhcc-ccCHHHHHhhhCCCCEEECCCCC
Confidence 888888873 343332101111111222 3 47766 2 4678775 88887
No 463
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=78.61 E-value=4.9 Score=40.19 Aligned_cols=77 Identities=23% Similarity=0.278 Sum_probs=53.8
Q ss_pred HHHHHhcCcCCCcEEEEeccCCCch--hHHHHHHHHhccCcEEEe-cchhhHHHHHhhCcccc-ccceee-ecccccCce
Q 011973 287 AAVVVNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVL-STSYAAHKT 361 (474)
Q Consensus 287 aAvvl~~ip~~~~~V~l~Gatg~~k--ig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~-~~~l~~-~t~~~~~~~ 361 (474)
++..++.++ ..+.+++.|..|.-| ++.|++..||++|+.|+. .-.|-..+|+.....+. ...|.. . .++
T Consensus 95 ~~~~~~~~~-~~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~~~~~~~~~~l~~~l-----~~~ 168 (254)
T COG1484 95 LASLVEFFE-RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAAFDEGRLEEKLLREL-----KKV 168 (254)
T ss_pred HHHHHHHhc-cCCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHhcCchHHHHHHHh-----hcC
Confidence 334445677 677899999876334 889999999999999999 77888888888755433 111111 1 366
Q ss_pred eEEEEcCc
Q 011973 362 KIWLVGDD 369 (474)
Q Consensus 362 ~vwivg~~ 369 (474)
++.|+||.
T Consensus 169 dlLIiDDl 176 (254)
T COG1484 169 DLLIIDDI 176 (254)
T ss_pred CEEEEecc
Confidence 78887664
No 464
>PRK08605 D-lactate dehydrogenase; Validated
Probab=78.59 E-value=4.9 Score=41.67 Aligned_cols=82 Identities=16% Similarity=0.118 Sum_probs=51.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------ 367 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------ 367 (474)
..++|.++|.- .||+++|+.|+ ..|.+|..+++..-...+.. ....+++++ +.++++++-
T Consensus 145 ~g~~VgIIG~G---~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~~~--------~~~~~~l~ell~~aDvIvl~lP~t~~ 213 (332)
T PRK08605 145 KDLKVAVIGTG---RIGLAVAKIFAKGYGSDVVAYDPFPNAKAATY--------VDYKDTIEEAVEGADIVTLHMPATKY 213 (332)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCccHhHHhh--------ccccCCHHHHHHhCCEEEEeCCCCcc
Confidence 45689999974 89999999996 56888887332211111110 011224432 556664421
Q ss_pred --CcCChhhhhcCCCCceeecccc
Q 011973 368 --DDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 368 --~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
..++.+...++++|++++..++
T Consensus 214 t~~li~~~~l~~mk~gailIN~sR 237 (332)
T PRK08605 214 NHYLFNADLFKHFKKGAVFVNCAR 237 (332)
T ss_pred hhhhcCHHHHhcCCCCcEEEECCC
Confidence 1334556778999999999999
No 465
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=78.41 E-value=3.1 Score=43.51 Aligned_cols=59 Identities=19% Similarity=0.180 Sum_probs=48.7
Q ss_pred HHHHHhcCcCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 011973 287 AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ 347 (474)
Q Consensus 287 aAvvl~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~ 347 (474)
.....-..|+-...|+++|... -+|.++|.-+.++|-.|++ |++++++++++++.-.++
T Consensus 22 ~~~~~~~~~k~~~hi~itggS~--glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~ 82 (331)
T KOG1210|consen 22 DHRSFIVKPKPRRHILITGGSS--GLGLALALECKREGADVTITARSGKKLLEAKAELELLTQ 82 (331)
T ss_pred HHHhhhcccCccceEEEecCcc--hhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhc
Confidence 3334444566678999999885 8999999999999999998 999999999999776664
No 466
>PTZ00117 malate dehydrogenase; Provisional
Probab=78.39 E-value=4 Score=42.07 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=28.6
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccC-cEEEe--cchhhHH
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYE 336 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~-v~v~l--~~~~~~~ 336 (474)
+..+|.++|| | .||+.+|..|+..| ..+.| .++++.+
T Consensus 4 ~~~KI~IIGa-G--~vG~~ia~~l~~~~~~~l~L~Di~~~~~~ 43 (319)
T PTZ00117 4 KRKKISMIGA-G--QIGSTVALLILQKNLGDVVLYDVIKGVPQ 43 (319)
T ss_pred CCcEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEECCCccch
Confidence 4568999998 7 99999999999888 46666 5555443
No 467
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=78.37 E-value=5.3 Score=41.32 Aligned_cols=64 Identities=16% Similarity=0.238 Sum_probs=40.1
Q ss_pred cEEEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHH--HH--HhhCc-cccccceeee-ccccc-CceeEEEE
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYE--KL--KLRIP-VEAQHNLVLS-TSYAA-HKTKIWLV 366 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~--~l--~~~~~-~~~~~~l~~~-t~~~~-~~~~vwiv 366 (474)
.+|.++|| | .+|+.+|..|+..|. .+.| .++++.+ .+ ..... .+...+ +.. ++|++ ++++++|.
T Consensus 7 ~KI~IIGa-G--~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~-I~~~~d~~~l~~aDiVI~ 80 (321)
T PTZ00082 7 RKISLIGS-G--NIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSK-VIGTNNYEDIAGSDVVIV 80 (321)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeE-EEECCCHHHhCCCCEEEE
Confidence 68999996 6 899999999998886 7766 5555322 11 11111 111122 344 46665 88888774
No 468
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=78.37 E-value=3.8 Score=46.80 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=31.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHh-ccCcEEEe--cchhhHHH
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKDDYEK 337 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l--~~~~~~~~ 337 (474)
.-++|.|+||- -+|+.||..++ +.|++|++ .+.+.+++
T Consensus 308 ~i~~v~ViGaG---~mG~giA~~~a~~~G~~V~l~d~~~~~l~~ 348 (708)
T PRK11154 308 PVNKVGVLGGG---LMGGGIAYVTATKAGLPVRIKDINPQGINH 348 (708)
T ss_pred cccEEEEECCc---hhhHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 45789999995 89999999998 88999999 56665544
No 469
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=78.19 E-value=3.2 Score=47.73 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=33.0
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 338 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l 338 (474)
.-++|.|+||- -+|+.||..+++.|++|++ ++++.+++.
T Consensus 334 ~i~~v~ViGaG---~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~ 374 (737)
T TIGR02441 334 PVKTLAVLGAG---LMGAGIAQVSVDKGLKTVLKDATPAGLDRG 374 (737)
T ss_pred cccEEEEECCC---HhHHHHHHHHHhCCCcEEEecCCHHHHHHH
Confidence 34689999995 8999999999999999999 677766653
No 470
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=78.12 E-value=3.6 Score=41.96 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=25.1
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
..+|.++| .| .||+.+|+.|.++|..+.+
T Consensus 3 ~~~v~IvG-~G--liG~s~a~~l~~~g~~v~i 31 (279)
T COG0287 3 SMKVGIVG-LG--LMGGSLARALKEAGLVVRI 31 (279)
T ss_pred CcEEEEEC-Cc--hHHHHHHHHHHHcCCeEEE
Confidence 35677777 77 9999999999999999966
No 471
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=78.00 E-value=7.9 Score=41.29 Aligned_cols=80 Identities=14% Similarity=0.014 Sum_probs=54.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc-------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------- 367 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------- 367 (474)
..++|-++|.- .||+.+|+.|..-|.+|+..+..+- .. .+. ....++++ +.++++++-
T Consensus 115 ~gktvGIIG~G---~IG~~va~~l~a~G~~V~~~Dp~~~-----~~-~~~----~~~~~l~ell~~aDiV~lh~Plt~~g 181 (381)
T PRK00257 115 AERTYGVVGAG---HVGGRLVRVLRGLGWKVLVCDPPRQ-----EA-EGD----GDFVSLERILEECDVISLHTPLTKEG 181 (381)
T ss_pred CcCEEEEECCC---HHHHHHHHHHHHCCCEEEEECCccc-----cc-ccC----ccccCHHHHHhhCCEEEEeCcCCCCc
Confidence 46789999975 8999999999999999998332110 00 000 11113433 556554422
Q ss_pred -----CcCChhhhhcCCCCceeecccc
Q 011973 368 -----DDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 368 -----~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
.-++.+.+.++++|+++|-.+|
T Consensus 182 ~~~T~~li~~~~l~~mk~gailIN~aR 208 (381)
T PRK00257 182 EHPTRHLLDEAFLASLRPGAWLINASR 208 (381)
T ss_pred cccccccCCHHHHhcCCCCeEEEECCC
Confidence 2356678999999999999999
No 472
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=77.90 E-value=5.6 Score=39.76 Aligned_cols=87 Identities=14% Similarity=0.099 Sum_probs=57.3
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---cccc-------CceeEE
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---SYAA-------HKTKIW 364 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t---~~~~-------~~~~vw 364 (474)
....|++.|++| -||.++++.+...|.+|.. ++.++.+.+++ ++.+. ++... +.++ ...+++
T Consensus 138 ~g~~VLI~ga~g--~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lGa~~---vi~~~~~~~~~~~~~~~~~~gvdvv 211 (325)
T TIGR02825 138 GGETVMVNAAAG--AVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LGFDV---AFNYKTVKSLEETLKKASPDGYDCY 211 (325)
T ss_pred CCCEEEEeCCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE---EEeccccccHHHHHHHhCCCCeEEE
Confidence 456899999998 9999999988899999876 78888888854 44422 33221 1111 235666
Q ss_pred E--EcCcCChhhhhcCCCCceeecccc
Q 011973 365 L--VGDDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 365 i--vg~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
+ +|.....+-...+++|-+++.+..
T Consensus 212 ~d~~G~~~~~~~~~~l~~~G~iv~~G~ 238 (325)
T TIGR02825 212 FDNVGGEFSNTVIGQMKKFGRIAICGA 238 (325)
T ss_pred EECCCHHHHHHHHHHhCcCcEEEEecc
Confidence 6 443333445556778888887763
No 473
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=77.89 E-value=4.2 Score=41.19 Aligned_cols=62 Identities=18% Similarity=0.275 Sum_probs=38.0
Q ss_pred EEEeccCCCchhHHHHHHHHhccCc-EEEe--cchhhHHHHHh----hCcc-ccccceeeec-cccc-CceeEEEE
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKL----RIPV-EAQHNLVLST-SYAA-HKTKIWLV 366 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v-~v~l--~~~~~~~~l~~----~~~~-~~~~~l~~~t-~~~~-~~~~vwiv 366 (474)
|.++|| | .+|+.+|..|+.+|. .|.+ +++++.+.... .... ..... +..+ ++++ ++++++|+
T Consensus 1 I~IIGa-G--~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t~d~~~l~dADiVIi 72 (300)
T cd01339 1 ISIIGA-G--NVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGTNDYEDIAGSDVVVI 72 (300)
T ss_pred CEEECC-C--HHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEcCCHHHhCCCCEEEE
Confidence 578999 7 899999999998876 8888 55554432222 1111 11122 3333 4555 88877663
No 474
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=77.88 E-value=6 Score=39.10 Aligned_cols=88 Identities=15% Similarity=0.148 Sum_probs=54.5
Q ss_pred cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecc----ccc---CceeEEE
Q 011973 295 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS----YAA---HKTKIWL 365 (474)
Q Consensus 295 p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~----~~~---~~~~vwi 365 (474)
.++...|++.|++| -+|.++++.+..+|.++.. +++++.+.++ +++... ++...+ .+. ...++++
T Consensus 143 ~~~~~~vlI~g~~g--~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~~~~~~~~~d~vl 216 (323)
T TIGR02823 143 TPEDGPVLVTGATG--GVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASE---VIDREDLSPPGKPLEKERWAGAV 216 (323)
T ss_pred CCCCceEEEEcCCc--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcE---EEccccHHHHHHHhcCCCceEEE
Confidence 33434999999998 9999999998899999876 6666666664 443321 221111 111 2245555
Q ss_pred --EcCcCChhhhhcCCCCceeeccc
Q 011973 366 --VGDDLTGKEQARAPKGTIFIPYT 388 (474)
Q Consensus 366 --vg~~i~~~eq~~a~~G~~f~~~~ 388 (474)
+|.....+-....+++-+|+.+.
T Consensus 217 d~~g~~~~~~~~~~l~~~G~~v~~g 241 (323)
T TIGR02823 217 DTVGGHTLANVLAQLKYGGAVAACG 241 (323)
T ss_pred ECccHHHHHHHHHHhCCCCEEEEEc
Confidence 33323334455677888888886
No 475
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=77.77 E-value=5.1 Score=39.30 Aligned_cols=30 Identities=27% Similarity=0.283 Sum_probs=26.2
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
..++|++.|- | .||+.+|+.|.++|.+++.
T Consensus 22 ~g~~vaIqGf-G--nVG~~~a~~L~~~G~~vV~ 51 (217)
T cd05211 22 EGLTVAVQGL-G--NVGWGLAKKLAEEGGKVLA 51 (217)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCEEEE
Confidence 5689999996 5 9999999999999887766
No 476
>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]
Probab=77.66 E-value=3.7 Score=43.66 Aligned_cols=143 Identities=18% Similarity=0.239 Sum_probs=88.5
Q ss_pred eecCCCCcceeeecCChhHHHHHH-hcCcC--CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCcc
Q 011973 268 LERQPNKLKIKVVDGSSLAAAVVV-NSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPV 344 (474)
Q Consensus 268 v~k~p~~L~irvv~GnsltaAvvl-~~ip~--~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~ 344 (474)
..--|.-|++|-.|--+.+-+.+. +++.+ .+.+|.++|=. +.|+-.|..|.+.|-.+...++++|++++++++.
T Consensus 19 ~~~~p~~~~~~a~~~~~i~d~~~~~~s~~~~k~tl~IaIIGfG---nmGqflAetli~aGh~li~hsRsdyssaa~~yg~ 95 (480)
T KOG2380|consen 19 LISPPRSLRIRAIDAAQIFDYMVSEDSIEQWKATLVIAIIGFG---NMGQFLAETLIDAGHGLICHSRSDYSSAAEKYGS 95 (480)
T ss_pred eccCcHHHHHHhhhhhhhhhcccCcchhhhcccceEEEEEecC---cHHHHHHHHHHhcCceeEecCcchhHHHHHHhcc
Confidence 333444355666654444443332 22332 46688888865 8999999999999999999666679999999766
Q ss_pred ccccceeeecccccCceeEEEEc-CcCChhh------hhcCCCCceeecccc--cCcc-----CCCCCeeeecCCccccC
Q 011973 345 EAQHNLVLSTSYAAHKTKIWLVG-DDLTGKE------QARAPKGTIFIPYTQ--IPPR-----KLRKDCFYHSTPAMIIP 410 (474)
Q Consensus 345 ~~~~~l~~~t~~~~~~~~vwivg-~~i~~~e------q~~a~~G~~f~~~~~--v~p~-----~~R~dc~y~~~~am~vP 410 (474)
..=.. + .++-++..++++.- +.+.-|. -.+...||+|.++.. -|++ -+-+||-.+.+-.|-=|
T Consensus 96 ~~ft~-l--hdlcerhpDvvLlctsilsiekilatypfqrlrrgtlfvdvlSvKefek~lfekYLPkdfDIlctHpmfGP 172 (480)
T KOG2380|consen 96 AKFTL-L--HDLCERHPDVVLLCTSILSIEKILATYPFQRLRRGTLFVDVLSVKEFEKELFEKYLPKDFDILCTHPMFGP 172 (480)
T ss_pred ccccc-H--HHHHhcCCCEEEEEehhhhHHHHHHhcCchhhccceeEeeeeecchhHHHHHHHhCccccceEeecCCcCC
Confidence 54211 1 11113566665521 1111111 113477999998765 2333 23499999999999877
Q ss_pred C----CCccc
Q 011973 411 P----SLSNM 416 (474)
Q Consensus 411 ~----~~~~~ 416 (474)
+ .|+|+
T Consensus 173 ksvnh~wqgl 182 (480)
T KOG2380|consen 173 KSVNHEWQGL 182 (480)
T ss_pred CcCCCccccC
Confidence 7 36644
No 477
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=77.61 E-value=4 Score=36.37 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=32.7
Q ss_pred EEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
|+++|+- .||..+|-.|++.|.+|.+ |++ +++.++++
T Consensus 1 I~I~G~G---aiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~ 39 (151)
T PF02558_consen 1 ILIIGAG---AIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQ 39 (151)
T ss_dssp EEEESTS---HHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHH
T ss_pred CEEECcC---HHHHHHHHHHHHCCCceEEEEccc-cHHhhhhe
Confidence 5788887 7999999999999999999 666 88988876
No 478
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=77.51 E-value=4.8 Score=41.70 Aligned_cols=99 Identities=11% Similarity=0.146 Sum_probs=63.5
Q ss_pred CCCcEEEEeccCCCchhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEE------
Q 011973 296 KTTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------ 366 (474)
Q Consensus 296 ~~~~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv------ 366 (474)
-..++|-++|-- .||++||+.|. --|.+|...+...-+.-..+ . . +...++++ +.+|++++
T Consensus 143 L~gktvGIiG~G---~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~----~--~-~~~~~l~ell~~sDvv~lh~plt~ 212 (323)
T PRK15409 143 VHHKTLGIVGMG---RIGMALAQRAHFGFNMPILYNARRHHKEAEER----F--N-ARYCDLDTLLQESDFVCIILPLTD 212 (323)
T ss_pred CCCCEEEEEccc---HHHHHHHHHHHhcCCCEEEEECCCCchhhHHh----c--C-cEecCHHHHHHhCCEEEEeCCCCh
Confidence 356889999985 89999999986 78988887221100000011 1 1 11224543 66666553
Q ss_pred --cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973 367 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 404 (474)
Q Consensus 367 --g~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~ 404 (474)
-..++.+++.+|++|+.||-++| |+.+ +++ -|++..+-
T Consensus 213 ~T~~li~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP 267 (323)
T PRK15409 213 ETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267 (323)
T ss_pred HHhhccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCC
Confidence 23567789999999999999999 5544 333 57777664
No 479
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=77.45 E-value=10 Score=36.35 Aligned_cols=86 Identities=10% Similarity=0.136 Sum_probs=55.0
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc----c---c-CceeEEE
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY----A---A-HKTKIWL 365 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~----~---~-~~~~vwi 365 (474)
...|++.|++| -+|.+.++.+...|.+|.. ++.++.+.+++ ++.. .++... +. . . ...++++
T Consensus 137 g~~vlI~g~~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vl 210 (320)
T cd05286 137 GDTVLVHAAAG--GVGLLLTQWAKALGATVIGTVSSEEKAELARA-AGAD---HVINYRDEDFVERVREITGGRGVDVVY 210 (320)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-CCCC---EEEeCCchhHHHHHHHHcCCCCeeEEE
Confidence 46899999988 9999999988899999887 67778877743 3321 222211 11 1 1 2345555
Q ss_pred --EcCcCChhhhhcCCCCceeecccc
Q 011973 366 --VGDDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 366 --vg~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
+|.....+-.+.++++-.|+.+.+
T Consensus 211 ~~~~~~~~~~~~~~l~~~g~~v~~g~ 236 (320)
T cd05286 211 DGVGKDTFEGSLDSLRPRGTLVSFGN 236 (320)
T ss_pred ECCCcHhHHHHHHhhccCcEEEEEec
Confidence 333333333456677888888763
No 480
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=77.30 E-value=20 Score=36.99 Aligned_cols=161 Identities=15% Similarity=0.236 Sum_probs=93.5
Q ss_pred HHHcCCcEEEecc-----ccccccc-------cccCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 011973 241 ADAKGVKVISLGL-----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV 289 (474)
Q Consensus 241 A~k~G~kV~~LG~-----ln~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns----------ltaAv 289 (474)
+.++|..++.|+. +.++|.+ ....-+.+.|+++ ...|+|+.+-+ +=+.+
T Consensus 61 ~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y~D~iviR~~~~~~~~~~a~~s~vPVINa~~g~~~HPtQ~LaDl~T 140 (301)
T TIGR00670 61 MKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGYSDAIVIRHPLEGAARLAAEVSEVPVINAGDGSNQHPTQTLLDLYT 140 (301)
T ss_pred HHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHhCCEEEEECCchhHHHHHHhhCCCCEEeCCCCCCCCcHHHHHHHHH
Confidence 5679999999987 5666654 5556677778776 24577876632 12455
Q ss_pred HHhcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccccceeeeccc-c-c-Ccee
Q 011973 290 VVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLSTSY-A-A-HKTK 362 (474)
Q Consensus 290 vl~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~---~l~~~~~~~~~~~l~~~t~~-~-~-~~~~ 362 (474)
+.+.... +..+|+++|...-+.+.+..+..+++-|.+|.+-.++.|+ .+.+++. +.+.. +..+++ + + ++++
T Consensus 141 i~e~~g~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~~~~~~~~-~~G~~-v~~~~d~~~a~~~aD 218 (301)
T TIGR00670 141 IYEEFGRLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPKEILEELK-AKGIK-VRETESLEEVIDEAD 218 (301)
T ss_pred HHHHhCCCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHH-HcCCE-EEEECCHHHHhCCCC
Confidence 5555432 4579999998711289999999999999999994444442 2222211 12333 334433 4 4 8888
Q ss_pred EEEEcCcCChhhh-hcCCCCceeecccccCcc---CCCCCee-eecCC
Q 011973 363 IWLVGDDLTGKEQ-ARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTP 405 (474)
Q Consensus 363 vwivg~~i~~~eq-~~a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~ 405 (474)
|+....+ +.|-. .+...-..|-+| |++.+ ..|+|+. .|.+|
T Consensus 219 vvyt~~~-~~er~~~~~~~~~~~~~y-~v~~ell~~a~~~ai~mHclP 264 (301)
T TIGR00670 219 VLYVTRI-QKERFPDPEEYEKYKGSY-GITLERLEAAKKGVIIMHPLP 264 (301)
T ss_pred EEEECCc-cccccCCHHHHHHHhcCC-eECHHHHhhcCCCCEEECCCC
Confidence 8776443 21100 000001123344 37776 4567775 55666
No 481
>PLN02477 glutamate dehydrogenase
Probab=77.25 E-value=10 Score=40.82 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=26.1
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEE
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA 328 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~ 328 (474)
..++|+|.|- | .||+.+|+.|.+.|.+|+
T Consensus 205 ~g~~VaIqGf-G--nVG~~~A~~L~e~GakVV 233 (410)
T PLN02477 205 AGQTFVIQGF-G--NVGSWAAQLIHEKGGKIV 233 (410)
T ss_pred cCCEEEEECC-C--HHHHHHHHHHHHcCCEEE
Confidence 3578999994 6 999999999999999999
No 482
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=77.23 E-value=4.2 Score=42.32 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=24.0
Q ss_pred cEEEEeccCCCchhHHHHHHHHhc-cCcEEEe
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQ-MGIKVAT 329 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~-~~v~v~l 329 (474)
.+|+++|||| .+|+.+.+.|.+ ...++..
T Consensus 4 ~~V~I~GatG--~iG~~l~~~L~~~p~~el~~ 33 (349)
T PRK08664 4 LKVGILGATG--MVGQRFVQLLANHPWFEVTA 33 (349)
T ss_pred cEEEEECCCC--HHHHHHHHHHHcCCCceEEE
Confidence 5799999999 999999999994 4446555
No 483
>PRK07578 short chain dehydrogenase; Provisional
Probab=77.22 E-value=2.8 Score=38.85 Aligned_cols=27 Identities=26% Similarity=0.389 Sum_probs=24.4
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
+++++|++| -||+++|+.|+++ .+|.+
T Consensus 2 ~vlItGas~--giG~~la~~l~~~-~~vi~ 28 (199)
T PRK07578 2 KILVIGASG--TIGRAVVAELSKR-HEVIT 28 (199)
T ss_pred eEEEEcCCc--HHHHHHHHHHHhc-CcEEE
Confidence 589999998 9999999999987 78777
No 484
>PLN02342 ornithine carbamoyltransferase
Probab=77.05 E-value=28 Score=36.85 Aligned_cols=162 Identities=15% Similarity=0.188 Sum_probs=95.1
Q ss_pred HHHcCCcEEEecccc----ccccc-------cccCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 011973 241 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV 291 (474)
Q Consensus 241 A~k~G~kV~~LG~ln----~~e~l-------n~~g~l~v~k~p~---------~L~irvv~Gns---------ltaAvvl 291 (474)
+.++|.+++.|+.=+ ++|.+ ....-+.+.|+|+ ...++|+.+-+ +=..++.
T Consensus 107 ~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y~D~IviR~~~~~~~~~la~~~~vPVINA~~~~~HPtQaLaDl~Ti~ 186 (348)
T PLN02342 107 FFLLGGHALYLGPDDIQLGKREETRDIARVLSRYNDIIMARVFAHQDVLDLAEYSSVPVINGLTDYNHPCQIMADALTII 186 (348)
T ss_pred HHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEeCCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 578999999996533 35554 3455567778876 23577776543 1134454
Q ss_pred hcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHH---HHhhCccccc-cceeeec-ccc-c-CceeE
Q 011973 292 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LKLRIPVEAQ-HNLVLST-SYA-A-HKTKI 363 (474)
Q Consensus 292 ~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~---l~~~~~~~~~-~~l~~~t-~~~-~-~~~~v 363 (474)
+.... +..+|+++|... .+.+..+..|.+-|.+|.+-.++.|+. +.+++. +.+ .. +..+ +.+ + ++++|
T Consensus 187 e~~G~l~glkva~vGD~~--nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~-~~g~~~-~~~~~d~~eav~~aDV 262 (348)
T PLN02342 187 EHIGRLEGTKVVYVGDGN--NIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKAR-AAGISK-IEITNDPAEAVKGADV 262 (348)
T ss_pred HHhCCcCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHH-HhCCCc-EEEEcCHHHHhCCCCE
Confidence 44332 457999999975 799999999999999999834343321 211111 111 12 3233 434 4 88888
Q ss_pred EEEcCcCChhhhhc-CCCCceeecccccCcc---CCCCCee-eecCCcc
Q 011973 364 WLVGDDLTGKEQAR-APKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM 407 (474)
Q Consensus 364 wivg~~i~~~eq~~-a~~G~~f~~~~~v~p~---~~R~dc~-y~~~~am 407 (474)
+..+.|.+..+..+ ...-..|-+| |++.+ ..++||. -|.+|+.
T Consensus 263 vy~~~W~s~~~~e~~~~~~~~~~~y-~vt~ell~~ak~~aivMHpLP~~ 310 (348)
T PLN02342 263 VYTDVWASMGQKEEAEKRKKAFQGF-QVNEALMKLAGPQAYFMHCLPAE 310 (348)
T ss_pred EEECCccccccchhhHHHHHhccCC-ccCHHHHhccCCCcEEeCCCCcC
Confidence 88876654321110 0011133445 38887 5568886 4778864
No 485
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=76.80 E-value=9.4 Score=37.99 Aligned_cols=54 Identities=13% Similarity=0.009 Sum_probs=40.2
Q ss_pred hHHHHHHhcCcC-CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 011973 285 LAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 340 (474)
Q Consensus 285 ltaAvvl~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~ 340 (474)
.||+..++.+.. ....|++.|++| .+|.+.++.+...|.+++. ++.++.+.+++
T Consensus 149 ~~a~~~~~~~~~~~~~~vlI~g~~g--~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~ 205 (334)
T PRK13771 149 GMVYRGLRRAGVKKGETVLVTGAGG--GVGIHAIQVAKALGAKVIAVTSSESKAKIVSK 205 (334)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCc--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 344444445522 356899999988 9999999998899999876 77888877743
No 486
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=76.76 E-value=4.2 Score=40.34 Aligned_cols=39 Identities=15% Similarity=0.237 Sum_probs=34.4
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+|.++|+ | .+|.++|..|++.|.+|++ |++++++.++++
T Consensus 2 ~I~IiG~-G--~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 42 (304)
T PRK06522 2 KIAILGA-G--AIGGLFGAALAQAGHDVTLVARRGAHLDALNEN 42 (304)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCeEEEEECChHHHHHHHHc
Confidence 5899998 5 8999999999999999998 778888888875
No 487
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=76.76 E-value=5.8 Score=41.25 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=35.4
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 343 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~ 343 (474)
...|+|.|++| .||.++++++...|.++.. ++.++.+.+++ ++
T Consensus 190 g~~vlV~Ga~g--~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~-~g 234 (398)
T TIGR01751 190 GDNVLIWGAAG--GLGSYATQLARAGGGNPVAVVSSPEKAEYCRE-LG 234 (398)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cC
Confidence 46999999998 9999999988899999765 77778777765 44
No 488
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=76.65 E-value=6.2 Score=41.31 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=73.3
Q ss_pred eeeecCChhHHHHHHhcC--cCCCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 011973 277 IKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL 352 (474)
Q Consensus 277 irvv~GnsltaAvvl~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~ 352 (474)
.-+.-..++||+..|..| ||.-.+|+|.||+| -||+++.+.---+|-+|.= -+.|+..-+++++.-+...+- +
T Consensus 128 LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaG--aVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idy-k 204 (340)
T COG2130 128 LGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAG--AVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDY-K 204 (340)
T ss_pred HhhcCCchHHHHHHHHHhcCCCCCCEEEEEeccc--ccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeec-C
Confidence 667778899999999999 77888999999999 9999999876678888876 788888888888877663221 1
Q ss_pred eccc-cc------CceeEEE--EcCcCChhhhhcCCCCce
Q 011973 353 STSY-AA------HKTKIWL--VGDDLTGKEQARAPKGTI 383 (474)
Q Consensus 353 ~t~~-~~------~~~~vwi--vg~~i~~~eq~~a~~G~~ 383 (474)
-.++ ++ ..+++.. ||..+-+.=...+...++
T Consensus 205 ~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aR 244 (340)
T COG2130 205 AEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFAR 244 (340)
T ss_pred cccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccc
Confidence 1133 11 4556655 544444444444444443
No 489
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=76.60 E-value=2.6 Score=42.26 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=24.1
Q ss_pred EEEEeccCCCchhHHHHHHHHhccCcEEEe
Q 011973 300 HVLLRGTVTANKVANAVASSLCQMGIKVAT 329 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~~~v~v~l 329 (474)
+|+|+|++| -||+++++.|.++| +|..
T Consensus 2 ~iLVtG~~G--fiGs~l~~~L~~~g-~V~~ 28 (299)
T PRK09987 2 NILLFGKTG--QVGWELQRALAPLG-NLIA 28 (299)
T ss_pred eEEEECCCC--HHHHHHHHHhhccC-CEEE
Confidence 699999999 99999999999888 5654
No 490
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=76.48 E-value=3.5 Score=45.39 Aligned_cols=41 Identities=24% Similarity=0.395 Sum_probs=36.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 341 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~ 341 (474)
+.+|.++|.. ++|+.+|+.|.++|+++++ .|+++.++++++
T Consensus 417 ~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~ 459 (558)
T PRK10669 417 CNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELRER 459 (558)
T ss_pred CCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
Confidence 6899999998 9999999999999999988 788888888754
No 491
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=76.47 E-value=2.6 Score=41.47 Aligned_cols=27 Identities=15% Similarity=0.386 Sum_probs=24.2
Q ss_pred EEEeccCCCchhHHHHHHHHhccCc-EEEe
Q 011973 301 VLLRGTVTANKVANAVASSLCQMGI-KVAT 329 (474)
Q Consensus 301 V~l~Gatg~~kig~ava~~L~~~~v-~v~l 329 (474)
|+|+|+|| -||+.+|+.|.++|. .|.+
T Consensus 1 ilItGatG--~iG~~l~~~L~~~g~~~v~~ 28 (314)
T TIGR02197 1 IIVTGGAG--FIGSNLVKALNERGITDILV 28 (314)
T ss_pred CEEeCCcc--hhhHHHHHHHHHcCCceEEE
Confidence 68999999 999999999999997 5665
No 492
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=76.36 E-value=4.4 Score=46.25 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=31.4
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHh-ccCcEEEe--cchhhHHHH
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKDDYEKL 338 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~-~~~v~v~l--~~~~~~~~l 338 (474)
.-++|.|+||- -+|+.||..++ +.|++|++ .+.+.+++.
T Consensus 303 ~i~~v~ViGaG---~mG~~iA~~~a~~~G~~V~l~d~~~~~l~~~ 344 (699)
T TIGR02440 303 KIKKVGILGGG---LMGGGIASVTATKAGIPVRIKDINPQGINNA 344 (699)
T ss_pred cccEEEEECCc---HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 44689999994 89999999888 68999999 666655543
No 493
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=76.22 E-value=4.3 Score=35.96 Aligned_cols=28 Identities=18% Similarity=0.358 Sum_probs=25.2
Q ss_pred EEEEeccCCCchhHHHHHHHHhc-cCcEEEe
Q 011973 300 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT 329 (474)
Q Consensus 300 ~V~l~Gatg~~kig~ava~~L~~-~~v~v~l 329 (474)
+|.+.|++| ++|+++++.+.+ ++.++.-
T Consensus 2 rV~i~G~~G--rMG~~i~~~i~~~~~~~lv~ 30 (124)
T PF01113_consen 2 RVGIVGASG--RMGRAIAEAILESPGFELVG 30 (124)
T ss_dssp EEEEETTTS--HHHHHHHHHHHHSTTEEEEE
T ss_pred EEEEECCCC--HHHHHHHHHHHhcCCcEEEE
Confidence 589999999 999999999995 8888776
No 494
>PRK06487 glycerate dehydrogenase; Provisional
Probab=76.15 E-value=5.4 Score=41.11 Aligned_cols=93 Identities=14% Similarity=0.109 Sum_probs=62.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEE--------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------- 366 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwiv-------- 366 (474)
..++|-++|-- .||++||+.|.--|.+|+-.+... +. +. ....++++ +.+|++++
T Consensus 147 ~gktvgIiG~G---~IG~~vA~~l~~fgm~V~~~~~~~----~~----~~----~~~~~l~ell~~sDiv~l~lPlt~~T 211 (317)
T PRK06487 147 EGKTLGLLGHG---ELGGAVARLAEAFGMRVLIGQLPG----RP----AR----PDRLPLDELLPQVDALTLHCPLTEHT 211 (317)
T ss_pred CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCCC----Cc----cc----ccccCHHHHHHhCCEEEECCCCChHH
Confidence 46789999985 999999999999999998722110 00 00 10114433 56666552
Q ss_pred cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973 367 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 404 (474)
Q Consensus 367 g~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~ 404 (474)
-..++.++..+||+|++||-++| |+.+ .++ -|++..+-
T Consensus 212 ~~li~~~~~~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP 264 (317)
T PRK06487 212 RHLIGARELALMKPGALLINTARGGLVDEQALADALRSGHLGGAATDVLSVEP 264 (317)
T ss_pred hcCcCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCC
Confidence 34577888999999999999999 5544 333 56666653
No 495
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=75.99 E-value=4.5 Score=42.13 Aligned_cols=88 Identities=8% Similarity=0.007 Sum_probs=47.6
Q ss_pred cEEEEeccCCCchhHHHHHHHHhc-cCcEEEe--cchhhHHHHHhhCccccccceeeecccc--c-CceeEEE--EcCcC
Q 011973 299 AHVLLRGTVTANKVANAVASSLCQ-MGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL--VGDDL 370 (474)
Q Consensus 299 ~~V~l~Gatg~~kig~ava~~L~~-~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t~~~--~-~~~~vwi--vg~~i 370 (474)
.+|+++|||| -+|+.+++.|.+ .++++.. +++++-+.+++..+.-....-...+++. + .++|+++ .+...
T Consensus 3 ~kVaIiGAtG--~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~vD~Vf~alP~~~ 80 (343)
T PRK00436 3 IKVGIVGASG--YTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPEILAGADVVFLALPHGV 80 (343)
T ss_pred eEEEEECCCC--HHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHHHhcCCCEEEECCCcHH
Confidence 4799999999 999999999994 4777655 3223222333332211100001122222 2 4567755 33333
Q ss_pred ChhhhhcC-CCCceeeccc
Q 011973 371 TGKEQARA-PKGTIFIPYT 388 (474)
Q Consensus 371 ~~~eq~~a-~~G~~f~~~~ 388 (474)
..+--..+ ..|.+++|.|
T Consensus 81 ~~~~v~~a~~aG~~VID~S 99 (343)
T PRK00436 81 SMDLAPQLLEAGVKVIDLS 99 (343)
T ss_pred HHHHHHHHHhCCCEEEECC
Confidence 22222222 5789888887
No 496
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=75.97 E-value=8.5 Score=36.35 Aligned_cols=88 Identities=14% Similarity=0.218 Sum_probs=54.6
Q ss_pred CcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc-c---c----CceeEEE
Q 011973 298 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY-A---A----HKTKIWL 365 (474)
Q Consensus 298 ~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~~~~~~~~~l~~~t--~~-~---~----~~~~vwi 365 (474)
...|++.|+.| .+|.++++.+...|++|.. +++++.+.++ +++.. ...++... +. + + +..+++|
T Consensus 105 g~~vlv~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 180 (288)
T smart00829 105 GESVLIHAAAG--GVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIP-DDHIFSSRDLSFADEILRATGGRGVDVVL 180 (288)
T ss_pred CCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCC-hhheeeCCCccHHHHHHHHhCCCCcEEEE
Confidence 46899999998 9999999988899999877 7888888774 34321 01222111 11 1 1 2345555
Q ss_pred --EcCcCChhhhhcCCCCceeecccc
Q 011973 366 --VGDDLTGKEQARAPKGTIFIPYTQ 389 (474)
Q Consensus 366 --vg~~i~~~eq~~a~~G~~f~~~~~ 389 (474)
+|....++-...++++..|+.+.+
T Consensus 181 ~~~~~~~~~~~~~~l~~~g~~v~~g~ 206 (288)
T smart00829 181 NSLAGEFLDASLRCLAPGGRFVEIGK 206 (288)
T ss_pred eCCCHHHHHHHHHhccCCcEEEEEcC
Confidence 332223333456677778887764
No 497
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=75.87 E-value=3.8 Score=43.11 Aligned_cols=73 Identities=12% Similarity=0.125 Sum_probs=45.2
Q ss_pred HHHHHHHHhccCcEEEe--cchhhHH-----HHHhhCccccccceeeecccc-c-CceeEEE--Ec------CcCChhhh
Q 011973 313 ANAVASSLCQMGIKVAT--ICKDDYE-----KLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG------DDLTGKEQ 375 (474)
Q Consensus 313 g~ava~~L~~~~v~v~l--~~~~~~~-----~l~~~~~~~~~~~l~~~t~~~-~-~~~~vwi--vg------~~i~~~eq 375 (474)
|+++|+-|++.|..|.+ |++++.+ .+.+. +. . . .++.+ + ++++++| +. +.+ ..=.
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~Laea---GA--~-~-AaS~aEAAa~ADVVIL~LPd~aaV~eVl-~GLa 103 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDA---GV--K-V-VSDDKEAAKHGEIHVLFTPFGKGTFSIA-RTII 103 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHC---CC--e-e-cCCHHHHHhCCCEEEEecCCHHHHHHHH-HHHH
Confidence 89999999999999999 5665443 23322 11 1 1 22333 2 5665544 22 222 1112
Q ss_pred hcCCCCceeecccccCcc
Q 011973 376 ARAPKGTIFIPYTQIPPR 393 (474)
Q Consensus 376 ~~a~~G~~f~~~~~v~p~ 393 (474)
..+++|+++|+.|-++|.
T Consensus 104 a~L~~GaIVID~STIsP~ 121 (341)
T TIGR01724 104 EHVPENAVICNTCTVSPV 121 (341)
T ss_pred hcCCCCCEEEECCCCCHH
Confidence 346999999999998876
No 498
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=75.67 E-value=3.4 Score=45.52 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=70.7
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Cccccccceeeeccccc-----CceeEEE---
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA-----HKTKIWL--- 365 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l--~~~~~~~~l~~~-~~~~~~~~l~~~t~~~~-----~~~~vwi--- 365 (474)
...+|-++|-- ..|+++|+-|.+.|.+|.+ |+.++-+.+.++ ...+. ..+.-..+.++ ++++++|
T Consensus 5 ~~~~IG~IGLG---~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga-~~~~~a~s~~e~v~~l~~~dvIi~~v 80 (493)
T PLN02350 5 ALSRIGLAGLA---VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGN-LPLYGFKDPEDFVLSIQKPRSVIILV 80 (493)
T ss_pred CCCCEEEEeeH---HHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCC-cccccCCCHHHHHhcCCCCCEEEEEC
Confidence 34578888865 8999999999999999999 888998888774 11121 11111123322 2465544
Q ss_pred -----EcCcCChhhhhcCCCCceeecccccCcc-------CCC-CCeeeecCCccccCC
Q 011973 366 -----VGDDLTGKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP 411 (474)
Q Consensus 366 -----vg~~i~~~eq~~a~~G~~f~~~~~v~p~-------~~R-~dc~y~~~~am~vP~ 411 (474)
|.+.++ .=...+.+|.++||.+-++|. +++ +.+.|.+-|+.--|.
T Consensus 81 ~~~~aV~~Vi~-gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fldapVSGG~~ 138 (493)
T PLN02350 81 KAGAPVDQTIK-ALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLGMGVSGGEE 138 (493)
T ss_pred CCcHHHHHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeCCCcCCHH
Confidence 233331 112345799999999998776 122 566788888765444
No 499
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=75.55 E-value=10 Score=38.23 Aligned_cols=86 Identities=15% Similarity=0.165 Sum_probs=55.5
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeec--ccc----c---CceeEEE-
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLST--SYA----A---HKTKIWL- 365 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l-~~~~~~~~l~~~~~~~~~~~l~~~t--~~~----~---~~~~vwi- 365 (474)
..++|++.|++| .+|.++++.+...|.++.. .+.++.+.++ +++.. .++... +.. + ...++++
T Consensus 154 ~~~~vlI~ga~g--~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~g~~---~v~~~~~~~~~~~l~~~~~~~~d~vl~ 227 (339)
T cd08249 154 KGKPVLIWGGSS--SVGTLAIQLAKLAGYKVITTASPKNFDLVK-SLGAD---AVFDYHDPDVVEDIRAATGGKLRYALD 227 (339)
T ss_pred CCCEEEEEcChh--HHHHHHHHHHHHcCCeEEEEECcccHHHHH-hcCCC---EEEECCCchHHHHHHHhcCCCeeEEEE
Confidence 467999999998 9999999999899999877 5557777774 34432 223221 111 1 3345555
Q ss_pred -EcC-cCChhhhhcCCC--Cceeeccc
Q 011973 366 -VGD-DLTGKEQARAPK--GTIFIPYT 388 (474)
Q Consensus 366 -vg~-~i~~~eq~~a~~--G~~f~~~~ 388 (474)
+|. ..-.+-.+.+++ |..++.+.
T Consensus 228 ~~g~~~~~~~~~~~l~~~~~g~~v~~g 254 (339)
T cd08249 228 CISTPESAQLCAEALGRSGGGKLVSLL 254 (339)
T ss_pred eeccchHHHHHHHHHhccCCCEEEEec
Confidence 443 333444556777 77788776
No 500
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=75.53 E-value=6 Score=42.37 Aligned_cols=96 Identities=17% Similarity=0.176 Sum_probs=63.7
Q ss_pred CCcEEEEeccCCCchhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CceeEEEEc-------
Q 011973 297 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------- 367 (474)
Q Consensus 297 ~~~~V~l~Gatg~~kig~ava~~L~~~~v~v~l~~~~~~~~l~~~~~~~~~~~l~~~t~~~~--~~~~vwivg------- 367 (474)
..++|-++|-- .||+++|+.|..-|.+|.-.+... . ... . ......++++ +.+|++++-
T Consensus 150 ~gktvGIiG~G---~IG~~vA~~~~~fGm~V~~~d~~~--~--~~~--~---~~~~~~~l~ell~~sDiVslh~Plt~~T 217 (409)
T PRK11790 150 RGKTLGIVGYG---HIGTQLSVLAESLGMRVYFYDIED--K--LPL--G---NARQVGSLEELLAQSDVVSLHVPETPST 217 (409)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEECCCc--c--ccc--C---CceecCCHHHHHhhCCEEEEcCCCChHH
Confidence 46789999975 999999999999999998833211 0 000 0 1111224543 666665521
Q ss_pred -CcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCeeeecC
Q 011973 368 -DDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST 404 (474)
Q Consensus 368 -~~i~~~eq~~a~~G~~f~~~~~---v~p~---------~~R---~dc~y~~~ 404 (474)
..++.+++.+||+|+.++-++| |+.+ +++ -|++..+-
T Consensus 218 ~~li~~~~l~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gaalDVf~~EP 270 (409)
T PRK11790 218 KNMIGAEELALMKPGAILINASRGTVVDIDALADALKSGHLAGAAIDVFPVEP 270 (409)
T ss_pred hhccCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHcCCceEEEEcCCCCCC
Confidence 2567889999999999999998 4433 344 57776664
Done!