Your job contains 1 sequence.
>011978
MEIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISD
HELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDG
RQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQ
TGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHT
LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF
DHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ
QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSG
SKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011978
(473 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 2136 3.3e-221 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 1542 2.9e-158 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 1536 1.3e-157 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 1536 1.3e-157 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 1534 2.1e-157 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 1527 1.1e-156 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 1495 2.8e-153 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 1489 1.2e-152 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 1488 1.5e-152 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 1413 1.4e-144 1
WB|WBGene00021074 - symbol:W07E6.2 species:6239 "Caenorha... 1309 1.4e-133 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 1274 7.3e-130 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 1164 3.3e-118 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 1152 6.2e-117 1
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 1122 9.4e-114 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 594 1.4e-56 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 455 1.7e-41 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 382 2.4e-35 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 378 6.5e-35 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 377 8.3e-35 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 373 2.2e-34 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 330 4.9e-33 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 356 1.4e-32 1
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 245 7.6e-32 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 349 7.7e-32 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 337 1.4e-30 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 337 1.4e-30 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 345 3.3e-30 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 332 4.9e-30 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 329 1.0e-29 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 329 1.0e-29 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 329 1.0e-29 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 329 1.0e-29 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 329 1.0e-29 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 329 1.0e-29 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 329 1.0e-29 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 321 7.9e-29 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 314 5.5e-28 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 314 5.5e-28 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 221 2.3e-27 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 307 3.6e-27 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 329 4.2e-27 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 307 7.3e-27 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 301 1.8e-26 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 300 2.4e-26 1
UNIPROTKB|F1SQT5 - symbol:APAF1 "Uncharacterized protein"... 323 3.7e-26 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 298 4.0e-26 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 293 1.5e-25 1
CGD|CAL0000293 - symbol:UTP13 species:5476 "Candida albic... 214 1.7e-25 2
UNIPROTKB|Q5AGB1 - symbol:CaO19.11744 "Putative uncharact... 214 1.7e-25 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 232 1.7e-25 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 292 1.9e-25 1
UNIPROTKB|I3LSG8 - symbol:I3LSG8 "Uncharacterized protein... 193 3.6e-25 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 288 5.5e-25 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 294 6.9e-25 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 240 8.9e-25 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 294 9.2e-25 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 285 1.2e-24 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 238 1.7e-24 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 240 2.9e-24 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 240 2.9e-24 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 240 2.9e-24 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 240 2.9e-24 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 240 2.9e-24 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 240 2.9e-24 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 240 2.9e-24 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 240 2.9e-24 2
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 299 3.2e-24 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 239 3.8e-24 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 237 6.5e-24 2
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 277 9.5e-24 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 239 1.0e-23 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 233 1.0e-23 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 275 1.6e-23 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 300 2.2e-23 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 286 2.6e-23 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 288 3.3e-23 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 271 4.5e-23 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 271 4.5e-23 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 271 4.5e-23 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 271 4.5e-23 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 283 4.6e-23 1
DICTYBASE|DDB_G0293070 - symbol:DDB_G0293070 "TROVE domai... 286 5.0e-23 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 233 5.4e-23 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 269 7.5e-23 1
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 290 9.2e-23 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 284 1.0e-22 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 285 1.1e-22 1
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 283 1.8e-22 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 283 1.9e-22 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 265 2.1e-22 1
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 284 2.2e-22 2
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 284 2.2e-22 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 284 2.2e-22 2
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 284 2.2e-22 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 286 2.8e-22 1
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 281 5.2e-22 2
TAIR|locus:2012971 - symbol:AT1G71840 "AT1G71840" species... 275 5.4e-22 1
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 196 6.2e-22 2
UNIPROTKB|F1NYZ8 - symbol:TBL1XR1 "Uncharacterized protei... 200 7.5e-22 2
WARNING: Descriptions of 1781 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 2136 (757.0 bits), Expect = 3.3e-221, P = 3.3e-221
Identities = 380/471 (80%), Positives = 432/471 (91%)
Query: 3 IETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHE 62
++T+ VMCLLTDPEG LG+ MY PQ AGP QL+Q+VN+ L+NEE LPY+FY+SD E
Sbjct: 4 MDTDEGKTVMCLLTDPEGTHLGSAMYIPQKAGPLQLTQLVNRFLDNEEMLPYSFYVSDEE 63
Query: 63 LLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQ 122
LLVP+G+YLEK+KVSVEKVL+IVYQ QAVFRIRPVNRCS TIAGH EAVL V+FSPDG+Q
Sbjct: 64 LLVPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQ 123
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
LASGSGDTTVRLWDL T+TP+F C GHKNWVL +AWS DGKHLVSGSK+GE+ CW+P+ G
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKG 183
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA 242
+ G+PL+GHKKWITGISWEPVHL++PCRRFV++SKDGDARIWD++L+K +ICLSGHTLA
Sbjct: 184 ELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLA 243
Query: 243 VTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH 302
VTCVKWGGDG+IYTGSQDCTIK+WETTQGKLIRELKGHGHW+NSLALSTEY LRTGAFDH
Sbjct: 244 VTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDH 303
Query: 303 TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
TG+QY P E K+ ALERYNK KG++PERLVSGSDDFTMFLWEP+VSKQPK R+TGHQQL
Sbjct: 304 TGRQYP-PNEEKQKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQL 362
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
VNHVYFSPDG+W+ASASFDKS++LWNG TG+FV VFRGHVGPVYQ+SWSADSRLLLSGSK
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSK 422
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
DSTLK+W+IRT+KLKQDLPGHADEVFAVDWSPDGEKV SGGKDRVLKLW G
Sbjct: 423 DSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWKG 473
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 1542 (547.9 bits), Expect = 2.9e-158, P = 2.9e-158
Identities = 278/461 (60%), Positives = 346/461 (75%)
Query: 17 DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKV 76
D G LG+P P + P +L + N LL E+ LP AF++ D E++ LG LE V
Sbjct: 23 DEGGQLLGSPFDVPVDITPDRLQLVCNALLAQEDPLPLAFFVHDAEIVSSLGKTLESQAV 82
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
EKVL I+YQPQA+FR+R V RC++++ GH+EAV+SVAFSP G+ LASGSGDTTVR WD
Sbjct: 83 ETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD 142
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L+T+TP F C GH++WVL I+WS DG+ L SG K G++ WDP TGK G L+GH KWI
Sbjct: 143 LSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWI 202
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
TG+SWEP+H N CR S+SKDG RIWD + +C L+GHT +VTC++WGGDG++Y+
Sbjct: 203 TGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYS 262
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS------SP 310
SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGAF+ + S
Sbjct: 263 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSL 322
Query: 311 EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP 370
+E+K+ AL RYN ++G PERLVSGSDDFT+FLW PA K+P TRMTGHQ L+N V FSP
Sbjct: 323 QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSP 382
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
D + VASASFDKSIKLW+G TGK++A RGHV VYQI+WSADSRLL+SGS DSTLKVWD
Sbjct: 383 DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
Query: 431 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L++W
Sbjct: 443 VKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 71/300 (23%), Positives = 122/300 (40%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + + +++ P + S S D R WD+S GH V + W
Sbjct: 110 LEGHSEAVISVAFSPTG-----KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLALSTEYA------LRTGAF 300
DG + +G ++ I +W+ + GK + R L GH W+ L+ +A + + +
Sbjct: 165 SPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSK 224
Query: 301 DHTGKQYSSP----EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
D + + + + E + + ++ L S S D T+ +W +T +
Sbjct: 225 DGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT-L 283
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN--GTTGKFVAVFRGHVGPVYQISWSADS 414
GH VN + S D + + +F+ + N G + + +
Sbjct: 284 QGHGHWVNTMALSTDYA-LRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPE 342
Query: 415 RLLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
RL+ SGS D TL +W +K + GH + V +SPD VAS D+ +KLW G
Sbjct: 343 RLV-SGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDG 401
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 1536 (545.8 bits), Expect = 1.3e-157, P = 1.3e-157
Identities = 277/476 (58%), Positives = 347/476 (72%)
Query: 2 EIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDH 61
E T ++ D G LG+P P + P +L + N LL E+ LP AFY+ D
Sbjct: 9 EAATRDVQRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEDPLPLAFYVHDA 68
Query: 62 ELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGR 121
E++ LG LE V EKVL I+YQPQA+FR+R V RC++++ GH+EAV+SVAFSP G+
Sbjct: 69 EIVSSLGRTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGK 128
Query: 122 QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT 181
LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG K G++ WDP T
Sbjct: 129 YLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST 188
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
GK G L+GH KWIT +SWEP+H N CR S+SKDG R+WD + +C L+GH
Sbjct: 189 GKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQ 248
Query: 242 AVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD 301
+VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGAF+
Sbjct: 249 SVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFE 308
Query: 302 HTGKQYS------SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTR 355
+ S +E+K+ AL RYN ++G PERLVSGSDDFT+FLW PA K+P R
Sbjct: 309 PAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLAR 368
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSR 415
MTGHQ L+N V FSPD + +ASASFDKSIKLW+G TGK++A RGHV VYQI+WSADSR
Sbjct: 369 MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 428
Query: 416 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
LL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L++W
Sbjct: 429 LLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 182 (69.1 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 69/299 (23%), Positives = 124/299 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + + +++ P + S S D R WD+S GH V + W
Sbjct: 111 LEGHSEAVISVAFSPTG-----KYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 165
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLALSTEYA------LRTGAF 300
DG + +G ++ I +W+ + GK + R L GH W+ +L+ +A + + +
Sbjct: 166 SPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSK 225
Query: 301 DHTGKQYSSPEEMKKAALERYNK----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
D + + + + + L + + ++ L S S D T+ +W +T +
Sbjct: 226 DGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT-L 284
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK-FVAVFRGHVGPVYQISWSADSR 415
GH VN + S D + + +F+ + N + + + Y +
Sbjct: 285 QGHGHWVNTMALSTDYA-LRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPE 343
Query: 416 LLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
L+SGS D TL +W +K + GH + V +SPD +AS D+ +KLW G
Sbjct: 344 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDG 402
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 1536 (545.8 bits), Expect = 1.3e-157, P = 1.3e-157
Identities = 281/481 (58%), Positives = 353/481 (73%)
Query: 1 MEIETETT-NNVMCLLT---DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAF 56
+E+ E ++V LL D G LG+P P + P QL + N LL +E LP AF
Sbjct: 5 VEVSDEAAASDVQRLLVQFQDEGGQLLGSPFDVPVDITPDQLQLVCNALLAQDEPLPLAF 64
Query: 57 YISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAF 116
Y+ D E++ LG LE V EK++ I+YQPQAVFR+R V RC++++ GH+EAV+SVAF
Sbjct: 65 YVHDAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAF 124
Query: 117 SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQC 176
SP G+ LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG K G++
Sbjct: 125 SPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILL 184
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
WDP TG G L+GH KWITG+SWEP+H+N CR S+SKDG R+WD + +C L
Sbjct: 185 WDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERIL 244
Query: 237 SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
+GHT +VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++ALST+YALR
Sbjct: 245 TGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALR 304
Query: 297 TGAFD------HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
TGAF+ + S +E+K+ A RYN ++G PERLVSGSDDFT+FLW PA K
Sbjct: 305 TGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDK 364
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW 410
+P RMTGHQ L+N V FSPD + VASASFDKSIKLW+G TGK++A RGHV VYQI+W
Sbjct: 365 KPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW 424
Query: 411 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 470
SADSRLL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L++
Sbjct: 425 SADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 484
Query: 471 W 471
W
Sbjct: 485 W 485
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 69/299 (23%), Positives = 122/299 (40%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + + +++ P + S S D R WD+S GH V + W
Sbjct: 112 LEGHSEAVISVAFSPTG-----KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 166
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLA-----LSTEYA-LRTGAF 300
DG + +G ++ I +W+ + G + R L GH W+ L+ ++ E + + +
Sbjct: 167 SPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSK 226
Query: 301 DHTGKQYSSP----EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
D + + + + E + + ++ L S S D T+ +W +T +
Sbjct: 227 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT-L 285
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK-FVAVFRGHVGPVYQISWSADSR 415
GH VN + S D + + +F+ + N + + + Y +
Sbjct: 286 QGHGHWVNTMALSTDYA-LRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPE 344
Query: 416 LLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
L+SGS D TL +W +K + GH + V +SPD VAS D+ +KLW G
Sbjct: 345 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDG 403
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 1534 (545.1 bits), Expect = 2.1e-157, P = 2.1e-157
Identities = 280/478 (58%), Positives = 350/478 (73%)
Query: 3 IETETTNNVMCLLT---DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYIS 59
+E +V LL D G LG+P P + P +L + N LL EE LP AFY+
Sbjct: 6 VEEAAAGDVQRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEEPLPLAFYVH 65
Query: 60 DHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD 119
D E++ LG LE V EK++ I+YQPQAVFR+R V RC++++ GH+EAV+SVAFSP
Sbjct: 66 DAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPT 125
Query: 120 GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP 179
G+ LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG K G++ WDP
Sbjct: 126 GKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDP 185
Query: 180 QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGH 239
TG G L+GH KWITG+SWEP+H+N CR S+SKDG R+WD + +C L+GH
Sbjct: 186 STGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGH 245
Query: 240 TLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGA 299
T +VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGA
Sbjct: 246 TQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 305
Query: 300 FD------HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPK 353
F+ + S +E+K+ A RYN ++G PERLVSGSDDFT+FLW PA K+P
Sbjct: 306 FEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPL 365
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD 413
RMTGHQ L+N V FSPD + VASASFDKSIKLW+G TGK++A RGHV VYQI+WSAD
Sbjct: 366 ARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 425
Query: 414 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
SRLL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L++W
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 68/299 (22%), Positives = 122/299 (40%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + + +++ P + S S D R WD+S GH V + W
Sbjct: 110 LEGHSEAVISVAFSPTG-----KYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLA-----LSTEYA-LRTGAF 300
DG + +G ++ + +W+ + G + R L GH W+ L+ ++ E + + +
Sbjct: 165 SPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSK 224
Query: 301 DHTGKQYSSP----EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
D + + + + E + + ++ L S S D T+ +W +T +
Sbjct: 225 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT-L 283
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK-FVAVFRGHVGPVYQISWSADSR 415
GH VN + S D + + +F+ + N + + + Y +
Sbjct: 284 QGHGHWVNTMALSTDYA-LRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPE 342
Query: 416 LLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
L+SGS D TL +W +K + GH + V +SPD VAS D+ +KLW G
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDG 401
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
Identities = 276/461 (59%), Positives = 343/461 (74%)
Query: 17 DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKV 76
D G LG+P P + P +L + N LL E+ LP AFY+ D E++ LG LE V
Sbjct: 23 DEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEDPLPLAFYVHDAEIISSLGKTLESQAV 82
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
EKVL I+YQPQAVFR+R V RC++++ GH+EAV+SVAFSP G+ LASGSGDTTVR WD
Sbjct: 83 ETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD 142
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L+T+TP F C GH++WVL I+WS DGK L SG K G++ WDP TGK G L+GH KWI
Sbjct: 143 LSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWI 202
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
T +SWEP+H N CR S+SKDG R+WD + +C L+GHT +VTC++WGGDG++Y+
Sbjct: 203 TALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYS 262
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS------SP 310
SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGAF+ + S
Sbjct: 263 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSL 322
Query: 311 EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP 370
+E+K+ AL RYN ++G ERLVSGSDDFT+FLW PA K+P RMTGHQ L+N V FSP
Sbjct: 323 QELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP 382
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
D + +ASASFDKSIKLW+G TGK++A RGHV VYQI+WSADSRLL+SGS DSTLKVWD
Sbjct: 383 DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
Query: 431 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L++W
Sbjct: 443 VKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 181 (68.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 69/299 (23%), Positives = 123/299 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + + +++ P + S S D R WD+S GH V + W
Sbjct: 110 LEGHSEAVISVAFSPTG-----KYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 164
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLALSTEYA------LRTGAF 300
DG + +G ++ I +W+ + GK + R L GH W+ +L+ +A + + +
Sbjct: 165 SPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSK 224
Query: 301 DHTGKQYSSP----EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
D + + + + E + + ++ L S S D T+ +W +T +
Sbjct: 225 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT-L 283
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK-FVAVFRGHVGPVYQISWSADSR 415
GH VN + S D + + +F+ + N + + + Y +
Sbjct: 284 QGHGHWVNTMALSTDYA-LRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGRGLE 342
Query: 416 LLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
L+SGS D TL +W +K + GH + V +SPD +AS D+ +KLW G
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDG 401
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 1495 (531.3 bits), Expect = 2.8e-153, P = 2.8e-153
Identities = 275/473 (58%), Positives = 338/473 (71%)
Query: 5 TETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELL 64
TE ++ D G PLG+P P + P +L + N LL +E +P AF+ D E++
Sbjct: 24 TEDVERLLIQFRDEAGEPLGSPFDVPVSITPDKLQLVCNALLQQDEPVPLAFFFHDAEIV 83
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA 124
V L L V EKVL I+YQPQAVFR+R V RC++++ GHTEAV+SVAFSP G+ LA
Sbjct: 84 VSLEKTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPTGKYLA 143
Query: 125 SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP 184
SGSGDTTVR WDL+T+TP F GH++WVL IAWS DGK L SG K ++ WDP TG
Sbjct: 144 SGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQ 203
Query: 185 SGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT 244
G L+GH KWIT + WEP+H+N CR SASKDG RIWD + +C L+GHT +VT
Sbjct: 204 IGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVT 263
Query: 245 CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD--- 301
CVKWGGDG++Y+ SQD TIKVW + G L R L+GH HWVN++ALST+Y LRTGAF+
Sbjct: 264 CVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAE 323
Query: 302 ---HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ S E+K A +RY+K++G PERLVSGSDDFT+FLW PA K+P RMTG
Sbjct: 324 ATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTG 383
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLL 418
HQ L+N V FSPD + +ASASFDKSIKLW G TGK++ RGHV VYQI+WSADSRLL+
Sbjct: 384 HQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLV 443
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
SGS DSTLKVWD T+KL DLPGHADEVFA DWSPDG++VASGGKD+ L++W
Sbjct: 444 SGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 178 (67.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 73/300 (24%), Positives = 120/300 (40%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + + +++ P + S S D R WD+S GH V + W
Sbjct: 123 LEGHTEAVISVAFSPTG-----KYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAW 177
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLA-----LSTE--Y---ALR 296
DG + +G ++ I +W+ G I R L GH W+ L ++ E Y A +
Sbjct: 178 SPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASK 237
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
G+ +++ + +K L S S D T+ +W +T +
Sbjct: 238 DGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRT-L 296
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN--GTTGKFVAVFRGHVGPVYQISWSADS 414
GH VN + S D + + +F+ + N +G +A + Y
Sbjct: 297 QGHAHWVNTMALSTD-YVLRTGAFEPAEATINPQDMSGS-LAELKDKAQQRYDKVRGQGP 354
Query: 415 RLLLSGSKDSTLKVW-DIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
L+SGS D TL +W +K + + GH + V +SPD +AS D+ +KLW G
Sbjct: 355 ERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEG 414
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 1489 (529.2 bits), Expect = 1.2e-152, P = 1.2e-152
Identities = 263/457 (57%), Positives = 351/457 (76%)
Query: 17 DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKV 76
D E + G P+ QN +QL ++N LLNN+E+LPY+F+++D E+ L ++LE +
Sbjct: 51 DSENDTTGPPINISQNVTTEQLQMLINSLLNNDEQLPYSFFVNDQEITNNLKNHLEG--L 108
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
S E LSI YQPQAVFR+RPV RC+++++GHTEAVL+ AFSPDG+ S GDTTVR+WD
Sbjct: 109 SDETTLSIYYQPQAVFRVRPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWD 168
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
+ T TP GH NWVL +AWS D K + + G+++ W PQTGK G+ L GH K+I
Sbjct: 169 IYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFI 228
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
TG+SWEP HLN C R S+SKD RIWD K ++ LSGHT++VTC+KWGG+G+IY+
Sbjct: 229 TGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYS 288
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKA 316
GSQD T++V+ TT G+L+R L GH HWVN+LAL+T+Y LRTG++DHTGK+Y + EE ++
Sbjct: 289 GSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRV 348
Query: 317 ALERYNKIKGNAP--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
ALERYN +K + E L+SGSDDFT+ +W P+V+K +R+TGHQQL+N V FSPDG++
Sbjct: 349 ALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRY 408
Query: 375 VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ 434
ASASFDKSIKLW+G +GKF+ FRGHVG VYQ+ WS+DSR L+SGSKDSTLK+WDI+T+
Sbjct: 409 FASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTK 468
Query: 435 KLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
K++++LPGHADEV+ VDWSPDG++VASG KDR+L++W
Sbjct: 469 KMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 290 (107.1 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 95/343 (27%), Positives = 158/343 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSA- 160
T+ GHT VL VA+SPD +++A+ + +R+W T + GH ++ ++W
Sbjct: 177 TLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPF 236
Query: 161 --DGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ K L S SK ++ WD ++ K + LSGH +T + W L S
Sbjct: 237 HLNPKCVRLASSSKDSTIRIWDTESCKNLMS-LSGHTMSVTCLKWGGEGL------IYSG 289
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
S+D R+++ + + V L GH V + D V+ TGS D T K ++T +
Sbjct: 290 SQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVA 349
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGNAP 329
L+ + V + + E + +G+ D T ++ P + K ++ R N + +
Sbjct: 350 LERYND-VKAKSKGMEILI-SGSDDFTVIMWN-PS-VTKTSISRLTGHQQLINLVSFSPD 405
Query: 330 ER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
R S S D ++ LW+ K GH V V +S D +++ S S D ++K+W+
Sbjct: 406 GRYFASASFDKSIKLWDGQSGKF-LGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWD 464
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
T K GH VY + WS D + SGSKD L++W +
Sbjct: 465 IKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 190 (71.9 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 77/298 (25%), Positives = 127/298 (42%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH + + ++ P + FVS D RIWD+ L GHT V V W
Sbjct: 136 MSGHTEAVLNCAFSP-----DGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAW 190
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLIRE-LKGHGHWVNSLA-----LSTEYA-LRTGAF 300
D I T + I++W GK + LKGH ++ L+ L+ + L + +
Sbjct: 191 SPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSK 250
Query: 301 DHTGKQYSSPEEMKKAALERYNK----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
D T + + + +L + +K + SGS D T+ ++ + + +
Sbjct: 251 DSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRV-L 309
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH VN + + D + + S+D + K ++ T + V V + S +
Sbjct: 310 DGHAHWVNTLALNTD-YVLRTGSYDHTGKEYD-TLEEAQRVALERYNDVK--AKSKGMEI 365
Query: 417 LLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
L+SGS D T+ +W+ K L GH + V +SPDG AS D+ +KLW G
Sbjct: 366 LISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDG 423
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 1488 (528.9 bits), Expect = 1.5e-152, P = 1.5e-152
Identities = 265/429 (61%), Positives = 328/429 (76%)
Query: 49 EEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHT 108
E+ LP AFY+ D E+ LG LE V EKVL I+YQPQA+FR+R V RC++++ GH+
Sbjct: 6 EDPLPLAFYVHDAEITSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHS 65
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSG 168
EAV+SVAFSP G+ LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG
Sbjct: 66 EAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASG 125
Query: 169 SKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS 228
K G++ WDP TGK G L+GH KWITG+SWEP+H N CR S+SKDG R+WD +
Sbjct: 126 CKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTT 185
Query: 229 LRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
+C L+GHT +VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++A
Sbjct: 186 AGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA 245
Query: 289 LSTEYALRTGAFDHTGKQYS------SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
LST+YALRTGAF+ + S +E+K AL RYN ++G PERLVSGSDDFT+F
Sbjct: 246 LSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLF 305
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+W PA K+P RMTGHQ L+N V FSPD + +ASASFDKSIKLW+G TGK++A RGHV
Sbjct: 306 MWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHV 365
Query: 403 GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 462
VYQI+WSADSRLL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASG
Sbjct: 366 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASG 425
Query: 463 GKDRVLKLW 471
GKD+ L++W
Sbjct: 426 GKDKCLRIW 434
Score = 182 (69.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 69/299 (23%), Positives = 122/299 (40%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + + +++ P + S S D R WD+S GH V + W
Sbjct: 61 LEGHSEAVISVAFSPTG-----KYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 115
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLALSTEYA------LRTGAF 300
DG + +G ++ I +W+ + GK + R L GH W+ L+ +A + + +
Sbjct: 116 SPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSK 175
Query: 301 DHTGKQYSSP----EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
D + + + + E + + ++ L S S D T+ +W +T +
Sbjct: 176 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT-L 234
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK-FVAVFRGHVGPVYQISWSADSR 415
GH VN + S D + + +F+ + N + + + Y +
Sbjct: 235 QGHGHWVNTMALSTDYA-LRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPE 293
Query: 416 LLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
L+SGS D TL +W +K + GH + V +SPD +AS D+ +KLW G
Sbjct: 294 RLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDG 352
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 262/478 (54%), Positives = 338/478 (70%)
Query: 2 EIETE---TTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYI 58
E +TE T + + L G G P+ P QQL I N LL NEE PY F++
Sbjct: 10 ETDTEQEATPHTIQARLVSDTGEEAGPPIDLPAGITTQQLGLICNALLKNEEATPYLFFV 69
Query: 59 SDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSP 118
+ E+ L L+ V E V+ IVYQPQAVF++RPV RC++++ GH EAV+S+ FSP
Sbjct: 70 GEDEIKKSLEDTLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSP 129
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
DG LASGSGDTTVRLWDLNT+TP F CTGHK WVLC++W+ DGK L SG KAG + WD
Sbjct: 130 DGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWD 189
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSG 238
P+TG+ G PLSGHKK I ++WEP H + CR+ SAS DGD RIWDV L +C++ ++G
Sbjct: 190 PETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAG 249
Query: 239 HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTG 298
HT AVT V+WGG G+IYT S+D T+K+W G L R GH HWVN++ALST+Y LRTG
Sbjct: 250 HTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTG 309
Query: 299 AF----DHTGKQYS-SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPK 353
F D + S S EE++++AL+RY + + E LVS SDD T++LW +K +
Sbjct: 310 PFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVE 369
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD 413
RMTGHQ +VN V +SPD + +ASASFDKS++LW + G+++A FRGHV VY ++WSAD
Sbjct: 370 -RMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSAD 428
Query: 414 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
SRL++SGSKDSTLKVW ++T+KL Q+LPGHADEVF VDW+PDG +VASGGKD+V+KLW
Sbjct: 429 SRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 245/475 (51%), Positives = 330/475 (69%)
Query: 5 TETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLL-NNEEKLPYAFYISDH-E 62
TE+ + +++ E G+ + P + +L + N+LL ++++ +P +F+ ++ E
Sbjct: 2 TESPQISVSFVSEDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAE 61
Query: 63 LLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQ 122
++ + LE+ + E L +VYQPQAVFR+RPV RCSA+I GH E V+S FSPDGR
Sbjct: 62 IVDSIRKSLEE--IDFETTLKLVYQPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRG 119
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
LASGSGD T+R+WD+ + P+ C HK+WVLCIAWS D + S K GE+ W+ +TG
Sbjct: 120 LASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTG 179
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA 242
+ G L HK+WIT ++W+P+H + CR S KDG+ IWD V CLSGHT +
Sbjct: 180 EQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTAS 239
Query: 243 VTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH 302
VTC++WGG+G+IY+GSQD T+K+W G + R + GH HW+N+LAL+T+YALRT F+
Sbjct: 240 VTCLRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEP 299
Query: 303 TGKQYSSP---EEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
+ K+ P EE +K A RY +I G ERLVSGSDDFT+F+W P +KQ RM
Sbjct: 300 S-KRCIKPDTVEECQKVAQTRYEAALEIAGG--ERLVSGSDDFTLFMWNPKETKQSINRM 356
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
TGH QLVN V FSPD +++ASASFDKS+KLW G TGK++A RGHVGPVYQ++WSADSRL
Sbjct: 357 TGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRL 416
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L+SGS DSTLKV++++T+ L DLPGH DEVF VDWSP+G KV SGGKD+VLKLW
Sbjct: 417 LVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK-LWNGT 390
+ SGS D T+ +W + MTGH +N + + D + ++ F+ S + + T
Sbjct: 251 IYSGSQDRTVKMWRADDGVMCRN-MTGHAHWINTLALNTDYA-LRTSCFEPSKRCIKPDT 308
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR-TQKLKQDLPGHADEVFA 449
+ V + +I A L+SGS D TL +W+ + T++ + GH V
Sbjct: 309 VEECQKVAQTRYEAALEI---AGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQ 365
Query: 450 VDWSPDGEKVASGGKDRVLKLWMG 473
V +SPD +AS D+ +KLW G
Sbjct: 366 VVFSPDTRYIASASFDKSVKLWCG 389
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
Identities = 225/402 (55%), Positives = 299/402 (74%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLW 135
S E ++++Y P+AVF+++PV R S+ IAGH +L AF+P ++ +G+GD T R+W
Sbjct: 112 STEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIW 171
Query: 136 DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKW 195
D +TQTPM GH NWVLC++WS DG+ + +GS ++ WDP++G+ G+ L GH KW
Sbjct: 172 DCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKW 231
Query: 196 ITGISWEPVHLNAPCR--RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
IT +SWEP+HL P R S+SKDG +IWD R C +SGHT +V+CVKWGG G+
Sbjct: 232 ITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGL 291
Query: 254 IYTGSQDCTIKVWE-TTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+Y+GS D T++VW+ +QG+ I LK H HWVN L+LST+YALR GAFDHTGK+ S+PEE
Sbjct: 292 LYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEE 351
Query: 313 MKKAALERYNKI---KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS 369
+K ALE Y KI GN+ E +V+ SDD+TMFLW P S +P RMTGHQ+LVNHV FS
Sbjct: 352 AQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFS 411
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
PDG+++ SASFD SIKLW+G GKF++ FRGHV VYQ++WS+D RLL+S SKD+TLKVW
Sbjct: 412 PDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
Query: 430 DIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D+RT+KL DLPGH DEV+ VDWS DG++V SGGKD++++LW
Sbjct: 472 DVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 106/264 (40%), Positives = 162/264 (61%)
Query: 20 GNPLGAPMYFPQNAGPQQLSQIVNKLLN-NEEKLPYAFYI-------SDHELLVPLGSYL 71
G+ +G + P +QL +++N+L +++ +PY F SD + + L
Sbjct: 42 GDNVGGALRVPGAISEKQLEELLNQLNGTSDDPVPYTFSCTIQGKKASDPVKTIDITDNL 101
Query: 72 EKHKV-----SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD-GRQLAS 125
+ S E ++++Y P+AVF+++PV R S+ IAGH +L AF+P ++ +
Sbjct: 102 YSSLIKPGYNSTEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVT 161
Query: 126 GSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS 185
G+GD T R+WD +TQTPM GH NWVLC++WS DG+ + +GS ++ WDP++G+
Sbjct: 162 GAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCL 221
Query: 186 GNPLSGHKKWITGISWEPVHLNAPCR--RFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
G+ L GH KWIT +SWEP+HL P R S+SKDG +IWD R C +SGHT +V
Sbjct: 222 GDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSV 281
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWE 267
+CVKWGG G++Y+GS D T++VW+
Sbjct: 282 SCVKWGGQGLLYSGSHDRTVRVWD 305
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 81/306 (26%), Positives = 145/306 (47%)
Query: 185 SGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT 244
S + ++GH I ++ P H ++ R V+ + D ARIWD + + L GH V
Sbjct: 135 SSSAIAGHGSTILCSAFAP-HTSS---RMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVL 190
Query: 245 CVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE-LKGHGHWVNSLALSTEYALRTGAF-- 300
CV W DG VI TGS D TI++W+ G+ + + L+GH W+ SL+ + ++ G+
Sbjct: 191 CVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPR 250
Query: 301 ------DHTGKQYSSPEEMKKAALERYNK----IKGNAPERLVSGSDDFTMFLWEPAVSK 350
D T K + + + + + + +K L SGS D T+ +W+ ++
Sbjct: 251 LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWD--INS 308
Query: 351 QPK--TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
Q + + H VNH+ S D + +FD + K T + + + +
Sbjct: 309 QGRCINILKSHAHWVNHLSLSTDYA-LRIGAFDHTGKK-PSTPEEAQKKALENYEKICKK 366
Query: 409 SWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 467
+ +++ ++++ S D T+ +W+ +++ K + GH V V +SPDG + S D
Sbjct: 367 NGNSEE-MMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNS 425
Query: 468 LKLWMG 473
+KLW G
Sbjct: 426 IKLWDG 431
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 1164 (414.8 bits), Expect = 3.3e-118, P = 3.3e-118
Identities = 223/472 (47%), Positives = 310/472 (65%)
Query: 10 NVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLL-NNEEKLPYAFYISDHELLVPLG 68
NV +D + N L A + P N+ +QL ++N+LL N+++ +PY F + + + +
Sbjct: 32 NVQFRASD-DSNEL-ASLLVPGNSSVRQLEALLNQLLENSDDPVPYNFALHHEDETIEIQ 89
Query: 69 SYLEK---HK--VSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD-GRQ 122
L H + E L+++Y PQAVFR+R V RC+A++ GH ++S FSP +
Sbjct: 90 DNLYTSVFHNGLMKTEDHLTLLYTPQAVFRVRAVTRCTASMNGHDGTIISAQFSPSTSSR 149
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
L +GSGD T RLWD +TQTP+ GH NWV C+AW+ D + +GS ++ WDP+ G
Sbjct: 150 LVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKG 209
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFV--SASKDGDARIWDVSLRKCVICLSGHT 240
P G+ L H K I + W+P+HL ++ S SKD RIW+V LR + LSGHT
Sbjct: 210 SPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHT 269
Query: 241 LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF 300
+TCV+WGG IY+ S D TI++W+ GK + LKGH VN L+LSTE+ LR+GA+
Sbjct: 270 APITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAY 329
Query: 301 DHTG-KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
DHT K S +E +KA ERY + ERLVS SDD + LW+P S +P T+M GH
Sbjct: 330 DHTDFKPKSFSDERRKAK-ERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGH 388
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
Q++VNH FSPDG+ +A+ASFD S++LW+G TGKF+A RGHV VYQ +WS DSRLL+S
Sbjct: 389 QKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVS 448
Query: 420 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S+D+TLKVWD+R++K+K DLPGH D+VFAVDWSPDG++VASGG D+ +++W
Sbjct: 449 SSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 241 (89.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 79/296 (26%), Positives = 137/296 (46%)
Query: 107 HTEAVLSVAF-----SPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
HT+ ++++ + +PD LASGS D TVR+W++ +T +F +GH + C+ W
Sbjct: 219 HTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG 278
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ S S ++ WD + GK + L GH + +S H+ R D
Sbjct: 279 GQN-WIYSSSYDKTIRIWDAKDGKCL-HILKGHAARVNHLSLSTEHV---LRSGAYDHTD 333
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG-KLIRELK 278
+ + RK C+K G+ ++ + S D + +W+ + K I ++
Sbjct: 334 FKPKSFSDERRKA------KERYEACLKQSGERLV-SASDDLQLILWDPQKSTKPITKMH 386
Query: 279 GHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAPERL- 332
GH VN + S + + T +FD + + + A L + + + RL
Sbjct: 387 GHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLL 446
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
VS S D T+ +W+ SK+ K + GH+ V V +SPDGQ VAS DK++++W+
Sbjct: 447 VSSSQDTTLKVWDVR-SKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 77/300 (25%), Positives = 127/300 (42%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
++GH I + P + R V+ S D AR+WD + + + GHT V+CV W
Sbjct: 130 MNGHDGTIISAQFSP----STSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAW 185
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRE-LKGHGHWVNSLAL--------STEYALRTG 298
D +I TGS D TI+ W+ +G I + L+ H + +L S Y L +G
Sbjct: 186 APDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASG 245
Query: 299 AFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKT 354
+ D+T + ++ L + ++ + S S D T+ +W+ K
Sbjct: 246 SKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHI 305
Query: 355 RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADS 414
+ GH VNH+ S + + S ++D + K + R Y+
Sbjct: 306 -LKGHAARVNHLSLSTE-HVLRSGAYDHT-----DFKPKSFSDERRKAKERYEACLKQSG 358
Query: 415 RLLLSGSKDSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
L+S S D L +WD ++ K + GH V +SPDG +A+ D ++LW G
Sbjct: 359 ERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG 418
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 222/439 (50%), Positives = 291/439 (66%)
Query: 49 EEKLPYAF-YISDH---------ELLVPLGSYLEKHKV-SVEKVLSIVYQPQAVFRIRPV 97
+E++PY F + SD ++L + L K V + E + + + PQA+FR++ V
Sbjct: 78 DERVPYRFTFQSDDKDSKDSQTIDILADIYHSLLKPGVKTTEDTIQLYFTPQAIFRVKAV 137
Query: 98 NRCSATIAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+RCSA+IAGH EA+L+ +FSP + SGSGD+T R+WD +T TP+ GH +WVL +
Sbjct: 138 SRCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAV 197
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCR-RFVS 215
++S +G + +GS ++ WD + G+ G PL GH KWIT ++WEP HL R S
Sbjct: 198 SYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
ASKD RIWDV ++ I LSGH +VTCV+WGG G IYT S D TIKVW + G LI+
Sbjct: 258 ASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQ 317
Query: 276 ELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNK---IKGNAPERL 332
L H H VN LALST++ LRT DHTGK S + A +R+ K I E+L
Sbjct: 318 TLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKL 377
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
VS SDDFTM+LW+P S +P R+ GHQ+ VNHV FSPD ++ASA FD +KLWNG G
Sbjct: 378 VSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDG 437
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
KF+ RGHVG VYQ +SADSRLL+S SKD+TLKVW++RT KL +DLPGH DEVFAVDW
Sbjct: 438 KFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDW 497
Query: 453 SPDGEKVASGGKDRVLKLW 471
SPDG+KV SGGKD+ +++W
Sbjct: 498 SPDGQKVGSGGKDKAIRIW 516
Score = 248 (92.4 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 85/299 (28%), Positives = 136/299 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
++GH + I S+ PV + VS S D ARIWD + L GHT V V +
Sbjct: 144 IAGHGEAILATSFSPVSSST----MVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSY 199
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLALSTEYALRTG-------A 299
+G +I TGS D T+++W+ +G+ + LKGH W+ SLA + ++G +
Sbjct: 200 SPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASAS 259
Query: 300 FDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTR 355
D T + + + L + ++ ++ + S D T+ +W +T
Sbjct: 260 KDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQT- 318
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSR 415
++ H VNH+ S D + +A D + K+ K VA+ + I+ +
Sbjct: 319 LSAHAHRVNHLALSTDFI-LRTAYHDHTGKVPESDADK-VAMAKKRFEKAATINNKIVEK 376
Query: 416 LLLSGSKDSTLKVWDIRTQ-KLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
L+ S S D T+ +WD + K L GH EV V +SPD +AS G D +KLW G
Sbjct: 377 LV-SASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNG 434
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 1122 (400.0 bits), Expect = 9.4e-114, P = 9.4e-114
Identities = 219/435 (50%), Positives = 286/435 (65%)
Query: 48 NEEKLPYAFYISDHELLVPLGSYLEKHKV--SVEKVLSIVYQPQAVFRIRPVNRCSATIA 105
N+E++ Y SD LG+ L +H + + E L++ +PQAVF+++ V+R + I
Sbjct: 96 NKEEIVIDSYPSD------LGALLRQHGIEDAFETTLTLAAEPQAVFKVQAVSRLAHRIP 149
Query: 106 GHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
GH E +L FSP +LA+GSGD T R+WD T TP GH WVL ++WS DG
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR 209
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL-NAPCRRFVSASKDGDAR 223
L + S ++ WDP+TGK G+ L GH KW+ GI+WEP+HL R VSASKD AR
Sbjct: 210 LATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTAR 269
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
IW V+ + LSGH +V+CV+WG G GV+YT S D T+KVW+ +G L+ +LK H
Sbjct: 270 IWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSH 329
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNK---IKGNAPERLVSGSD 337
HWVN LALST++ RTG FDHT ++ EE A ERY K + G ERLVS SD
Sbjct: 330 AHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKAKERYEKAARVGGKIVERLVSASD 389
Query: 338 DFTMFLWEPAVS-KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
DFTM+L++P +P RM GHQ+ VNHV FSPDG +ASA +D + KLWN GKF+
Sbjct: 390 DFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFIN 449
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDG 456
RGHV PVYQ S+SADSRLL++ SKD+TLKVW++RT KL DLPGH DEV+ VDWSPDG
Sbjct: 450 TLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDG 509
Query: 457 EKVASGGKDRVLKLW 471
++V SGG+D+ ++LW
Sbjct: 510 QRVGSGGRDKAVRLW 524
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 594 (214.2 bits), Expect = 1.4e-56, P = 1.4e-56
Identities = 133/376 (35%), Positives = 212/376 (56%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH ++ SVAF+PDG++LAS S D+T+++WDL T H V +A+S DG
Sbjct: 829 TFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG 888
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S S ++ W+P TG+ + L G W+ +++ P ++ S S+
Sbjct: 889 KLLASSSLDSTIKVWNPATGELQQS-LEGRSGWVKSVAFSP-----DGKKLASGSEKNTV 942
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++W+ + + + L GH+ +V V + DG + + S D TIK+W +T G+L + KGH
Sbjct: 943 KLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHD 1002
Query: 282 HWVNSLALSTEYA-LRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PE--RLVSG 335
W+ ++A S + L +G+ D+T K + + E++++ + + A P+ +L S
Sbjct: 1003 LWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASS 1062
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ LW+ A + +T + GH Q V V FSPDG+ +AS S+D +IKLWN TG+
Sbjct: 1063 SLDSTIKLWDSATGELQRT-LEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ 1121
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
G V +++S D + L SG DST+K+WD T +L Q L GH+D + +V +SPD
Sbjct: 1122 QTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPD 1181
Query: 456 GEKVASGGKDRVLKLW 471
G+ +ASG D+ KLW
Sbjct: 1182 GKLLASGSYDQTAKLW 1197
Score = 551 (199.0 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 127/376 (33%), Positives = 205/376 (54%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H+++V SVAFSPDG+ LAS S D+T+++W+ T G WV +A+S DG
Sbjct: 871 TLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDG 930
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L SGS+ ++ W+P TG+ L GH + + +++ P ++ S+S D
Sbjct: 931 KKLASGSEKNTVKLWNPATGELL-QTLEGHSQSVRSVAFSP-----DGKQLASSSSDTTI 984
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++W+ + + GH L + V + DG + +GS D TIK+W+ +L + L+ H
Sbjct: 985 KLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHS 1044
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGN--APER--LVSG 335
V+++A S + L + + D T K + S + LE +++ ++ +P+ L S
Sbjct: 1045 RSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASN 1104
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ LW P + +T +TG V+ V FSPDG+ +AS +D +IKLW+ TG+ +
Sbjct: 1105 SYDGTIKLWNPLTGELQQT-LTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELL 1163
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
GH + + +S D +LL SGS D T K+WD T +L Q GH+ V +V +SPD
Sbjct: 1164 QTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPD 1223
Query: 456 GEKVASGGKDRVLKLW 471
G+ +AS +KLW
Sbjct: 1224 GKLLASSSYGETIKLW 1239
Score = 537 (194.1 bits), Expect = 1.8e-50, P = 1.8e-50
Identities = 132/376 (35%), Positives = 197/376 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H V SV FSPDG+QL SGS D TV++WD T + GH V +A+S DG
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L SGS + WD TG+ GH I +++ P + SAS D
Sbjct: 805 KLLASGSYDNTIDLWDSATGELL-QTFEGHPHSIWSVAFAP-----DGKELASASDDSTI 858
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD++ + L H+ +V V + DG ++ + S D TIKVW G+L + L+G
Sbjct: 859 KIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA--PE--RLVSG 335
WV S+A S + L +G+ +T K ++ LE +++ ++ A P+ +L S
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASS 978
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ LW + +T GH + V FSPDG+ + S S D +IKLW+ T +
Sbjct: 979 SSDTTIKLWNSTTGELQQT-FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQ 1037
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
H V+ +++S D + L S S DST+K+WD T +L++ L GH+ V +V +SPD
Sbjct: 1038 QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD 1097
Query: 456 GEKVASGGKDRVLKLW 471
G+ +AS D +KLW
Sbjct: 1098 GKLLASNSYDGTIKLW 1113
Score = 513 (185.6 bits), Expect = 6.4e-48, P = 6.4e-48
Identities = 124/366 (33%), Positives = 198/366 (54%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ G + V SVAFSPDG++LASGS TV+LW+ T + GH V +A+S DG
Sbjct: 913 SLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDG 972
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S S ++ W+ TG+ GH WI +++ P + VS S D
Sbjct: 973 KQLASSSSDTTIKLWNSTTGELQ-QTFKGHDLWIRAVAFSP-----DGKHLVSGSDDNTI 1026
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD++ + L H+ +V V + D + + S D TIK+W++ G+L R L+GH
Sbjct: 1027 KLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHS 1086
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSS-PEEMKKAALERYNKIKGNA--PE--RLVSG 335
V S+ S + L + ++D T K ++ E+++ R + + A P+ +L SG
Sbjct: 1087 QGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASG 1146
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ LW+ A + +T + GH + V FSPDG+ +AS S+D++ KLW+ TG+ +
Sbjct: 1147 YYDSTIKLWDSATGELLQT-LEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELL 1205
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+F GH V +++S D +LL S S T+K+WD T +L Q L + +V +SPD
Sbjct: 1206 QIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPD 1265
Query: 456 GEKVAS 461
G ++AS
Sbjct: 1266 GNRLAS 1271
Score = 501 (181.4 bits), Expect = 1.2e-46, P = 1.2e-46
Identities = 126/365 (34%), Positives = 194/365 (53%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+++V SVAFSPDG+QLAS S DTT++LW+ T GH W+ +A+S DG
Sbjct: 955 TLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
KHLVSGS ++ WD T + + L H + + +++ P ++ S+S D
Sbjct: 1015 KHLVSGSDDNTIKLWDLATSELQQS-LEDHSRSVHAVAFSPDD-----KQLASSSLDSTI 1068
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD + + L GH+ V V + DG ++ + S D TIK+W G+L + L G
Sbjct: 1069 KLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRS 1128
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN-KIKGN--APER--LVSG 335
WV+S+A S + L +G +D T K + S LE ++ +I+ +P+ L SG
Sbjct: 1129 DWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASG 1188
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T LW+PA + + GH + V V FSPDG+ +AS+S+ ++IKLW+ TG+ +
Sbjct: 1189 SYDQTAKLWDPATGELLQI-FEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELL 1247
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+++S D L S T K+WD T +L Q L GH+ V WS
Sbjct: 1248 QTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIWDPATGELLQALKGHSKWV----WSRT 1302
Query: 456 GEKVA 460
G ++
Sbjct: 1303 GAGIS 1307
Score = 491 (177.9 bits), Expect = 1.4e-45, P = 1.4e-45
Identities = 119/344 (34%), Positives = 185/344 (53%)
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKK 194
W QT H V + +S DGK LVSGS ++ WDP TG+ L GH
Sbjct: 739 WSAEQQT----LENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELL-QTLDGHSG 793
Query: 195 WITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV- 253
+ +++ P + S S D +WD + + + GH ++ V + DG
Sbjct: 794 TVESLAFSP-----DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE 848
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS-SPE 311
+ + S D TIK+W+ G+L + L H V S+A S + L + + D T K ++ +
Sbjct: 849 LASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATG 908
Query: 312 EMKKAALERYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY 367
E++++ R +K A P+ +L SGS+ T+ LW PA + +T + GH Q V V
Sbjct: 909 ELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQT-LEGHSQSVRSVA 967
Query: 368 FSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLK 427
FSPDG+ +AS+S D +IKLWN TTG+ F+GH + +++S D + L+SGS D+T+K
Sbjct: 968 FSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIK 1027
Query: 428 VWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+WD+ T +L+Q L H+ V AV +SPD +++AS D +KLW
Sbjct: 1028 LWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLW 1071
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 455 (165.2 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 120/377 (31%), Positives = 174/377 (46%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A GH AV SV+FS D R LAS SGD TV++WD T GH WV + +S D
Sbjct: 257 AQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHD 316
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ L S S G ++ WD TG L GH + + + H R S S D
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQ-RMLKGHNDSVRSVVFS--H---DSRLIASGSNDRT 370
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
RIW+ + H +V V + D + + S +K+W+T G L L+GH
Sbjct: 371 VRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGH 430
Query: 281 GHWVNSLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYN----KIKGNAPERLV-S 334
VNS++ S + L A D T K + + + LE +N + + RL+ S
Sbjct: 431 DDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIAS 490
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
SDD T+ +W+ A + + H V V FS D + +ASAS D ++K+W+ TG
Sbjct: 491 ASDDMTVKIWDTATVPL-QNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSL 549
Query: 395 VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP 454
GH V +S+S DSRLL S S D T+K+W T ++ G ++ +S
Sbjct: 550 ENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSH 609
Query: 455 DGEKVASGGKDRVLKLW 471
+AS D +K+W
Sbjct: 610 TSNLLASAMDDGTVKIW 626
Score = 447 (162.4 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 115/342 (33%), Positives = 166/342 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH E V SV FS D R LAS S D TV++WD T T GH + V + +S D
Sbjct: 300 TLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDS 359
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + SGS ++ W+ TG + H+ + +S+ H RR SAS G+
Sbjct: 360 RLIASGSNDRTVRIWETTTGLLR-HTFEDHEDSVMAVSF--AH---DSRRLASASDGGNV 413
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD L GH V V + D ++ + S D T+K+W G L R L+GH
Sbjct: 414 KIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHN 473
Query: 282 HWVNSLALSTEYALRTGAFDH-TGKQYSSPEEMKKAALERY-NKIKG---NAPERLV-SG 335
WV S+ S + L A D T K + + + LE + N ++ + RL+ S
Sbjct: 474 DWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASA 533
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
SDD T+ +W+ A T + GH VN V FSPD + +ASAS D ++K+W TG
Sbjct: 534 SDDMTVKIWDTATGSLENT-LEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQ 592
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLK 437
F G +++S S LL S D T+K+WD+ L+
Sbjct: 593 HTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLR 634
Score = 371 (135.7 bits), Expect = 1.5e-32, P = 1.5e-32
Identities = 98/314 (31%), Positives = 151/314 (48%)
Query: 166 VSGSKAGELQCW-DPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
+SG K LQ + P+ GH + + +S+ H R SAS DG +I
Sbjct: 237 ISGIKCAPLQVYASALLFSPA--QFKGHDRAVGSVSFS--H---DSRLLASASGDGTVKI 289
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
WD + L GH V V + D ++ + S D T+K+W+T G L R LKGH
Sbjct: 290 WDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDS 349
Query: 284 VNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERY-NKIKG----NAPERLVSGSD 337
V S+ S + L +G+ D T + + + + + E + + + + RL S SD
Sbjct: 350 VRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASD 409
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
+ +W+ + GH VN V FSPD + +ASAS D+++K+W+ TG
Sbjct: 410 GGNVKIWDTRTGSLQNV-LEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRT 468
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
GH V + +S DSRL+ S S D T+K+WD T L+ +L H + V +V +S D
Sbjct: 469 LEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSR 528
Query: 458 KVASGGKDRVLKLW 471
+AS D +K+W
Sbjct: 529 LLASASDDMTVKIW 542
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 93/323 (28%), Positives = 158/323 (48%)
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A + G ++GS + WD +G+ N L GH+ + I++ N + +
Sbjct: 98 VALNKSGSCFITGSYDRTCKLWDTASGEEL-NTLEGHRNVVYAIAFN----NPYGDKIAT 152
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLI 274
S D ++W V KC GHT + C+ + ++ TGS D T K+W+ G+ +
Sbjct: 153 GSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEV 212
Query: 275 RELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---- 329
L+GH + SL+ +T + TG+FDHT + + K L + +A
Sbjct: 213 YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWD 272
Query: 330 -ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+++GS D T LW+ K T +TGH + F G+ +A+AS D + ++++
Sbjct: 273 CSLILTGSMDKTCKLWDATNGKCVAT-LTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
T K +A GH G + +IS++ LL+GS D T ++WD +T + Q L GH DE+F
Sbjct: 332 AATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF 391
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
+ ++ G V +G KD ++W
Sbjct: 392 SCAFNYKGNIVITGSKDNTCRIW 414
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 87/335 (25%), Positives = 168/335 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VA + G +GS D T +LWD + + GH+N V IA++ G
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK + GH I +S+ P + S D A
Sbjct: 148 DKIATGSFDKTCKLWSVETGK-CYHTFRGHTAEIVCLSFNP-----QSTLVATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + V L GH+ + + + GD +I TGS D T+ VW+ G+ + L GH
Sbjct: 202 KLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRII-TGSFDHTVVVWDADTGRKVNILIGH 260
Query: 281 GHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAPE---RLVS- 334
++S + + + +L TG+ D T K + + A L ++ +I + + +L++
Sbjct: 261 CAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D T ++ A +++ ++ GH+ ++ + F+P G + + S DK+ ++W+ TG+
Sbjct: 321 ASADGTARIFS-AATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQC 379
Query: 395 VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
+ V GH ++ +++ ++++GSKD+T ++W
Sbjct: 380 LQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 288 (106.4 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 83/293 (28%), Positives = 136/293 (46%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW + T GH ++C++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD Q G+ L GH I +S+ N R ++ S D
Sbjct: 189 STLVATGSMDTTAKLWDIQNGEEVYT-LRGHSAEIISLSF-----NTSGDRIITGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+WD + V L GH ++ + D +I TGS D T K+W+ T GK + L GH
Sbjct: 243 VVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGH 302
Query: 281 GHWV-NSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
+ +S T + T + D T + +S+ A LE + +KI N L++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T +W+ A + Q + GH + F+ G V + S D + ++W
Sbjct: 363 GSSDKTARIWD-AQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 273 (101.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 70/257 (27%), Positives = 125/257 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ ++F+P +A+GS DTT +LWD+ ++ GH ++ +++
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ G +++GS + WD TG+ N L GH I+ S+ N C ++ S
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKV-NILIGHCAEISSASF-----NWDCSLILTGSM 281
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD + KCV L+GH + +C + G +I T S D T +++ K I +
Sbjct: 282 DKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARIFSAATRKCIAK 340
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN--------KIKGN 327
L+GH ++ ++ + + L TG+ D T + + + LE + KGN
Sbjct: 341 LEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGN 400
Query: 328 APERLVSGSDDFTMFLW 344
+++GS D T +W
Sbjct: 401 I---VITGSKDNTCRIW 414
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS-PD 455
V + H+ P+ ++ + ++GS D T K+WD + + L GH + V+A+ ++ P
Sbjct: 87 VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPY 146
Query: 456 GEKVASGGKDRVLKLW 471
G+K+A+G D+ KLW
Sbjct: 147 GDKIATGSFDKTCKLW 162
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 93/323 (28%), Positives = 156/323 (48%)
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A + G ++GS + WD +G+ + L GH+ + I++ N + +
Sbjct: 98 VALNKAGSCFITGSYDRTCKVWDTASGEEL-HTLEGHRNVVYAIAFN----NPYGDKIAT 152
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLI 274
S D ++W KC GHT + C+ + V+ TGS D T K+W+ G+ +
Sbjct: 153 GSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEV 212
Query: 275 RELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKAAL-----ERYNKIKGNA 328
L GH + SL+ T + TG+FDHT + + K L E + +
Sbjct: 213 VTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWD 272
Query: 329 PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+++GS D T LW+ K T +TGH + F G+ +A+AS D + +++N
Sbjct: 273 CSLILTGSMDKTCMLWDATSGKCVAT-LTGHDDEILDSCFDYTGKLIATASADGTARVYN 331
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
TT K + GH G + +IS++ LL+GS D T ++WD++T + Q L GH DE+F
Sbjct: 332 ATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIF 391
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
+ ++ G V +G KD ++W
Sbjct: 392 SCAFNYKGNIVITGSKDNSCRIW 414
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 86/335 (25%), Positives = 169/335 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VA + G +GS D T ++WD + + GH+N V IA++ G
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK + GH I +S+ P + S D A
Sbjct: 148 DKIATGSFDKTCKLWSAETGK-CYHTFRGHTAEIVCLSFNPQSTVV-----ATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + V+ L+GH + + + GD +I TGS D T+ VW+ + G+ + L GH
Sbjct: 202 KLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRII-TGSFDHTVVVWDASTGRKVHTLIGH 260
Query: 281 GHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAPE---RLVS- 334
++S S + +L TG+ D T + + A L ++ +I + + +L++
Sbjct: 261 CAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D T ++ A +++ T++ GH+ ++ + F+P G + + S DK+ ++W+ TG+
Sbjct: 321 ASADGTARVYN-ATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQC 379
Query: 395 VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
+ V GH ++ +++ ++++GSKD++ ++W
Sbjct: 380 LQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 281 (104.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 81/293 (27%), Positives = 136/293 (46%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW T GH ++C++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD Q+G+ L+GH I +S++ R ++ S D
Sbjct: 189 STVVATGSMDTTAKLWDIQSGEEVVT-LTGHLAEIISLSFD-----TSGDRIITGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+WD S + V L GH ++ + D +I TGS D T +W+ T GK + L GH
Sbjct: 243 VVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGH 302
Query: 281 GHWV-NSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
+ +S T + T + D T + Y++ LE + +KI N RL++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T +W+ + + + GH + F+ G V + S D S ++W
Sbjct: 363 GSSDKTARIWDVQTGQCLQV-LEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 265 (98.3 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 71/259 (27%), Positives = 124/259 (47%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ ++F+P +A+GS DTT +LWD+ + + TGH ++ +++
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG--ISWEPVHLNAPCRRFVSA 216
G +++GS + WD TG+ + L GH I+ SW+ C ++
Sbjct: 228 DTSGDRIITGSFDHTVVVWDASTGRKV-HTLIGHCAEISSALFSWD-------CSLILTG 279
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
S D +WD + KCV L+GH + +C + G +I T S D T +V+ T K I
Sbjct: 280 SMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARVYNATTRKCI 338
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN--------KIK 325
+L+GH ++ ++ + + L TG+ D T + + LE + K
Sbjct: 339 TKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 326 GNAPERLVSGSDDFTMFLW 344
GN +++GS D + +W
Sbjct: 399 GNI---VITGSKDNSCRIW 414
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS-PD 455
V R H+ P+ ++ + ++GS D T KVWD + + L GH + V+A+ ++ P
Sbjct: 87 VLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPY 146
Query: 456 GEKVASGGKDRVLKLW 471
G+K+A+G D+ KLW
Sbjct: 147 GDKIATGSFDKTCKLW 162
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 94/292 (32%), Positives = 145/292 (49%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
P L GH WI +++ P R S S D ++WD + L GH+ +V
Sbjct: 32 PELQTLEGHSDWIETVTFSP-----DGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSV 86
Query: 244 TCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL---RTGA 299
V + +G ++ +GS D TIK+W + L ++GH V S+A S L G+
Sbjct: 87 QSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGS 146
Query: 300 FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
HT + +S + + A ++ L SGS + T+ LW+ A T + GH
Sbjct: 147 LKHTIEGHS--DWVLSVAFSPDGQL-------LASGSAEKTIKLWDSATCGLKHT-LGGH 196
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
V + FSPDG+ +AS S D +IKLW+ +G GH + +++S + +LL S
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLAS 256
Query: 420 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GS D+T+K+WD T + L GH+D V +V +SPD + + SG D +KLW
Sbjct: 257 GSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 97/313 (30%), Positives = 155/313 (49%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH +W+ + +S DG+ L SGS ++ WDP +G L GH + +++ P N
Sbjct: 39 GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLK-QTLEGHSSSVQSVAFSP---N 94
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWE 267
+ S S D ++W+ + + GH+ V V + +G ++W
Sbjct: 95 G--QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG-----------QLWN 141
Query: 268 TTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK--- 323
G L ++GH WV S+A S + L +G+ + T K + S K L ++
Sbjct: 142 PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVL 201
Query: 324 -IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
+ + RL+ SGS+D T+ LW+P S K + GH + + FSP+GQ +AS S D
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPP-SGSLKHTLEGHSNKIESLAFSPNGQLLASGSSD 260
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL- 440
+IKLW+ TG F +GH V + +S DS+LL SGS D+T+K+WD T LK +
Sbjct: 261 ATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMR 320
Query: 441 -PGHADEV-FAVD 451
PG + F+++
Sbjct: 321 TPGIVRSIEFSIE 333
Score = 318 (117.0 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 87/248 (35%), Positives = 123/248 (49%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN 138
++V S+ + P + TI GH++ VLSVAFSPDG+ LASGS + T++LWD
Sbjct: 126 DRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSA 185
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T GH NWVL + +S DG+ L SGS ++ WDP +G + L GH I
Sbjct: 186 TCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLK-HTLEGHSNKIES 244
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTG 257
+++ P N + S S D ++WD + L GH+ V V + D ++ +G
Sbjct: 245 LAFSP---NG--QLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESG 299
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRT--GAFD----HTGKQYSSP 310
S D TIK+W+ G L ++ G V S+ S E L T G F HTG Y S
Sbjct: 300 SGDNTIKLWDPATGILKHSMRTPGI-VRSIEFSIELPQLITNLGTFSIQAWHTG--YPSR 356
Query: 311 EEMKKAAL 318
KK A+
Sbjct: 357 SSGKKTAV 364
Score = 274 (101.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 74/211 (35%), Positives = 104/211 (49%)
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-I 324
E G ++ L+GH W+ ++ S + L +G+ D T K + K LE ++ +
Sbjct: 27 EDNWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSV 86
Query: 325 KGNA--P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+ A P + L SGS D T+ LW A S K M GH V V FSP+GQ
Sbjct: 87 QSVAFSPNGQLLASGSSDTTIKLWNSA-SDSLKHTMEGHSDRVESVAFSPNGQ------- 138
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
LWN G GH V +++S D +LL SGS + T+K+WD T LK L
Sbjct: 139 -----LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTL 193
Query: 441 PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH++ V + +SPDG +ASG D +KLW
Sbjct: 194 GGHSNWVLPLVFSPDGRLLASGSNDATIKLW 224
Score = 171 (65.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 35/101 (34%), Positives = 58/101 (57%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH++ + +V FSPDGR LASGS DTT++LWD + GH + V +A+S +G
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ L SGS ++ W+ + + + GH + +++ P
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLK-HTMEGHSDRVESVAFSP 135
Score = 162 (62.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 35/101 (34%), Positives = 56/101 (55%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+ +V SVAFSP+G+ LASGS DTT++LW+ + + GH + V +A+S +G
Sbjct: 78 TLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG 137
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
Q W+P G + + GH W+ +++ P
Sbjct: 138 ------------QLWNPAIGSLK-HTIEGHSDWVLSVAFSP 165
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 90/323 (27%), Positives = 159/323 (49%)
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A + G ++GS + WD +G+ + L GH+ + I++ N + +
Sbjct: 98 VALNKSGSCFITGSYDRTCKLWDTASGEEL-HTLEGHRNVVYAIAFN----NPYGDKIAT 152
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLI 274
S D ++W V KC GHT + C+ + ++ TGS D T K+W+ G+ +
Sbjct: 153 GSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEV 212
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAAL-----ERYNKIKGNA 328
L GH + SL+ +T + TG+FDHT + + K L E + +
Sbjct: 213 FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWD 272
Query: 329 PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+++GS D T LW+ AV+ + +TGH + F G+ +A+AS D + ++++
Sbjct: 273 CSLILTGSMDKTCKLWD-AVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
T + V GH G + +IS++ LL+GS D T ++WD +T + Q L GH DE+F
Sbjct: 332 AATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF 391
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
+ ++ G+ + +G KD ++W
Sbjct: 392 SCAFNYKGDIIITGSKDNTCRIW 414
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 88/334 (26%), Positives = 167/334 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VA + G +GS D T +LWD + + GH+N V IA++ G
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK + GH I +S+ P + S D A
Sbjct: 148 DKIATGSFDKTCKLWSVETGK-CYHTFRGHTAEIVCLSFNP-----QSTLVATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD+ + V L+GH+ + + + G I TGS D T+ VWE G+ + L GH
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHC 261
Query: 282 HWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAPE---RLVS-G 335
++S + + +L TG+ D T K + + A L ++ +I + + +L++
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATA 321
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T ++ A +++ T++ GH+ ++ + F+P G + + S DK+ ++W+ TG+ +
Sbjct: 322 SADGTARIFS-AATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCL 380
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
V GH ++ +++ ++++GSKD+T ++W
Sbjct: 381 QVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 286 (105.7 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 80/293 (27%), Positives = 137/293 (46%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW + T GH ++C++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD Q+G+ L+GH I +S+ N R ++ S D
Sbjct: 189 STLVATGSMDTTAKLWDIQSGEEVFT-LTGHSAEIISLSF-----NTSGNRIITGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+W+ + V L GH ++ + D +I TGS D T K+W+ GK + L GH
Sbjct: 243 VTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGH 302
Query: 281 GHWV-NSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
+ +S T + T + D T + +S+ LE + +KI N RL++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T +W+ A + Q + GH + F+ G + + S D + ++W
Sbjct: 363 GSSDKTARIWD-AQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 261 (96.9 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 66/254 (25%), Positives = 126/254 (49%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ ++F+P +A+GS DTT +LWD+ + +F TGH ++ +++
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ G +++GS + W+ TG+ L GH I+ + N C ++ S
Sbjct: 228 NTSGNRIITGSFDHTVTVWEADTGRKVYT-LIGHCAEISSAVF-----NWDCSLILTGSM 281
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD KCV L+GH + +C + G +I T S D T +++ + + +
Sbjct: 282 DKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARIFSAATRECVTK 340
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGNA----PE 330
L+GH ++ ++ + + L TG+ D T + + + LE + ++I A +
Sbjct: 341 LEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGD 400
Query: 331 RLVSGSDDFTMFLW 344
+++GS D T +W
Sbjct: 401 IIITGSKDNTCRIW 414
Score = 134 (52.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 385 KLWNGTTGKFVA--VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 442
KL + KF V R H+ P+ ++ + ++GS D T K+WD + + L G
Sbjct: 73 KLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEG 132
Query: 443 HADEVFAVDWS-PDGEKVASGGKDRVLKLW 471
H + V+A+ ++ P G+K+A+G D+ KLW
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLW 162
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 330 (121.2 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 108/374 (28%), Positives = 173/374 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ ++AFS D RQL +GS D TVRLW+ T GH VL +A S+DG+
Sbjct: 770 LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGR 829
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS ++ WD TG SG + +++ P R+ + KDG
Sbjct: 830 QIVSGSIEA-VKLWDAATGDLLKTLASG---FAGSVAFSP-----DSRQIAAGFKDGKIF 880
Query: 224 IWDVS--LRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
IWD + L+K L H A+ + + D + T S D TIK W+ T G ++E GH
Sbjct: 881 IWDAAGTLQKT---LERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG-VQEAVGH 936
Query: 281 GHWVNSLALSTE-YALRTGAFDHTGKQYSSPE-EMKKAA---LERYNKIKGNAPERLVSG 335
V ++ LS + + +G+ D T K + + +++K L+ K+ + R +
Sbjct: 937 SKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVS 996
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
+ +W+ A K + + + V SPDG+ +AS + IKLW+ TG +
Sbjct: 997 CSSEAVKIWDAATGKVQNSFES--DDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLL 1054
Query: 396 AVFRGH--------VGPVYQIS--------------WSADSRLLLSGSKDSTLKVWDIRT 433
G+ V+ I +S D++L+LS S D +K+WD T
Sbjct: 1055 KTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAAT 1114
Query: 434 QKLKQDLPGHADEV 447
L++ LP H+D +
Sbjct: 1115 GDLQKRLPCHSDSI 1128
Score = 290 (107.1 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 91/338 (26%), Positives = 161/338 (47%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK--KWITGISWEP------- 203
V +A+ D K ++SG G + WD TG ++ H + +P
Sbjct: 674 VKAMAFLPDSKLIISGYYDGSVMLWDTTTG--DRQEIADHFGISKVNYTYLQPPEQGGYG 731
Query: 204 VH---LNAPCRRFVSA--SKDGDA-RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYT 256
+H +A C++ + S+D ++D + L GH+ + + + D + T
Sbjct: 732 LHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVT 791
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKK 315
GS DCT+++W TT G L + GH V S+A+S++ + +G+ + ++ ++ K
Sbjct: 792 GSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEAVKLWDAATGDLLK 851
Query: 316 AALERYNKIKGNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ 373
+ +P+ ++ +G D +F+W+ A + Q KT + H + + FSPD +
Sbjct: 852 TLASGFAGSVAFSPDSRQIAAGFKDGKIFIWDAAGTLQ-KT-LERHPGAIMSIAFSPDVK 909
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT 433
+ + S D +IK W+ T G V GH V + S D +++ SGS D T+K+WD T
Sbjct: 910 QLVTCSTDSTIKRWDITIGG-VQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAAT 968
Query: 434 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L++ L GH D V V +S D ++ S + V K+W
Sbjct: 969 GDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEAV-KIW 1005
Score = 264 (98.0 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 107/396 (27%), Positives = 173/396 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GHT VLSVA S DGRQ+ SGS + V+LWD T + K T + +A+S D
Sbjct: 811 TFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGD-LLK-TLASGFAGSVAFSPDS 867
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + +G K G++ WD G L H I I++ P ++ V+ S D
Sbjct: 868 RQIAAGFKDGKIFIWDA-AGTLQ-KTLERHPGAIMSIAFSP-----DVKQLVTCSTDSTI 920
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+ WD+++ + GH+ VT + DG VI +GS D TIK+W+ G L + L GH
Sbjct: 921 KRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHL 979
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN--KIKGNAPE--RLVSGSD 337
V + S + K + + + + E + I +P+ + SG
Sbjct: 980 DTVEKVVFSLDNRQIVSCSSEAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHC 1039
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQ--------------QLVNHVY--------FSPDGQWV 375
+ + LW+ A KT M G++ QL ++ FSPD + +
Sbjct: 1040 NGRIKLWDMATGSLLKT-MAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLI 1098
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
S S D++IKLW+ TG H +DS + + S+ S
Sbjct: 1099 LSTSTDRAIKLWDAATGDLQKRLPCH----------SDSIITDAFSRSS----------- 1137
Query: 436 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
G+ + +F+V +S DG+ +A+ D+ +++W
Sbjct: 1138 ------GYPNWIFSVAFSSDGQHIAAASADKTIRVW 1167
Score = 263 (97.6 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 84/296 (28%), Positives = 142/296 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H A++S+AFSPD +QL + S D+T++ WD+ T + + GH V + S DG
Sbjct: 891 TLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDI-TIGGVQEAVGHSKHVTTMVLSPDG 949
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K + SGS ++ WD TG L+GH + E V + R+ VS S +
Sbjct: 950 KVIASGSADKTIKLWDAATGDLQ-KTLTGHLDTV-----EKVVFSLDNRQIVSCSSEA-V 1002
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD + K + T V DG I +G + IK+W+ G L++ + G+
Sbjct: 1003 KIWDAATGKVQNSFESDDV-FTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYR 1061
Query: 282 HWVNSLALSTEY--ALRTGAFDH--TGKQYSSPEEM-----KKAALERYNKIKGNAPERL 332
+SL + + L+ F+ TG +S ++ A++ ++ G+ +RL
Sbjct: 1062 SKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRL 1121
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
SD ++ +R +G+ + V FS DGQ +A+AS DK+I++W+
Sbjct: 1122 PCHSD---------SIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWS 1168
Score = 258 (95.9 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 108/390 (27%), Positives = 179/390 (45%)
Query: 115 AFSPDGRQLAS-G-SGDTT-VRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKA 171
AFS D +Q+A+ G S D+T + L+D T GH + +A+S+D + LV+GS
Sbjct: 736 AFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVD 795
Query: 172 GELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK 231
++ W+ TG GH + ++ +++ R+ VS S + ++WD +
Sbjct: 796 CTVRLWNTTTGDLE-KTFVGHTGTVLSVA-----ISSDGRQIVSGSIEA-VKLWDAATGD 848
Query: 232 CVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+ L SG +V + D I G +D I +W+ G L + L+ H + S+A
Sbjct: 849 LLKTLASGFAGSVA---FSPDSRQIAAGFKDGKIFIWDAA-GTLQKTLERHPGAIMSIAF 904
Query: 290 STEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN--APERLV--SGSDDFTMFLW 344
S + L T + D T K++ + A+ + +P+ V SGS D T+ LW
Sbjct: 905 SPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLW 964
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP 404
+ A KT +TGH V V FS D + + S S +++K+W+ TGK F
Sbjct: 965 DAATGDLQKT-LTGHLDTVEKVVFSLDNRQIVSCS-SEAVKIWDAATGKVQNSFESD--D 1020
Query: 405 VYQI-SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD--------EVFAVD---- 451
V+ I + S D + + SG + +K+WD+ T L + + G+ EVF +
Sbjct: 1021 VFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEA 1080
Query: 452 ----------WSPDGEKVASGGKDRVLKLW 471
+SPD + + S DR +KLW
Sbjct: 1081 IFNTQITGLVFSPDAKLILSTSTDRAIKLW 1110
Score = 210 (79.0 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 83/340 (24%), Positives = 139/340 (40%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG 172
SVAFSPD RQ+A+G D + +WD T H ++ IA+S D K LV+ S
Sbjct: 860 SVAFSPDSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDS 918
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
++ WD G GH K +T + P + S S D ++WD +
Sbjct: 919 TIKRWDITIG--GVQEAVGHSKHVTTMVLSP-----DGKVIASGSADKTIKLWDAATGDL 971
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
L+GH V V + D +K+W+ GK+ NS
Sbjct: 972 QKTLTGHLDTVEKVVFSLDNRQIVSCSSEAVKIWDAATGKV----------QNSFESDDV 1021
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP 352
+ + + D GK +S ++ ++ G+ + + F + Q
Sbjct: 1022 FTIVAVSPD--GKHIASGH--CNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQL 1077
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV-------------AVFR 399
+ + Q + + FSPD + + S S D++IKLW+ TG A R
Sbjct: 1078 QEAIFNTQ--ITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSR 1135
Query: 400 --GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLK 437
G+ ++ +++S+D + + + S D T++VW I + LK
Sbjct: 1136 SSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSIE-KSLK 1174
Score = 201 (75.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 76/300 (25%), Positives = 138/300 (46%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSG-HTLA 242
P L+GH + + +++ P ++ S S G ++WD + LSG H
Sbjct: 611 PMIQTLTGHSEAVWRVAFSP-----DGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKR 665
Query: 243 --------VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
V + + D +I +G D ++ +W+TT G +E+ H ++ + +
Sbjct: 666 RYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDR-QEIADH-FGISKVNYTYLQ 723
Query: 294 ALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP 352
G + H G +S+ + K+ A +++ D + L++ A
Sbjct: 724 PPEQGGYGLHAGA-FSA--DCKQIAAFGWSR-------------DSTCIMLFDTATGDLQ 767
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + + FS D + + + S D +++LWN TTG F GH G V ++ S+
Sbjct: 768 KI-LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISS 826
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLP-GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D R ++SGS ++ +K+WD T L + L G A +V +SPD ++A+G KD + +W
Sbjct: 827 DGRQIVSGSIEA-VKLWDAATGDLLKTLASGFAG---SVAFSPDSRQIAAGFKDGKIFIW 882
Score = 149 (57.5 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG-H--------KNWV 153
T+ GH+EAV VAFSPDG+Q+ASGS ++LWD T + +G H + V
Sbjct: 615 TLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQV 674
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTG 182
+A+ D K ++SG G + WD TG
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTG 703
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 41/127 (32%), Positives = 60/127 (47%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLW-----DL-NTQTPMFKC-TGHKNWVLCIAWSADGKHL 165
++ FSP+ + G V +W + ++ TPM + TGH V +A+S DGK +
Sbjct: 577 AIIFSPES-SVVKGENLHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDGKQI 635
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSG-HKKWITGISWEPVHLNA--P-CRRFVSASKDGD 221
SGS +G ++ WD TG LSG H K I E V A P + +S DG
Sbjct: 636 ASGSDSGLIKLWDTTTGSLQ-KTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGS 694
Query: 222 ARIWDVS 228
+WD +
Sbjct: 695 VMLWDTT 701
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 95/302 (31%), Positives = 161/302 (53%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT--GHKNWVLCIAWSA 160
T+ GH +++ SV FSPDG+ LAS S D T+++W F+ T GHK + IAWS
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIW--GAYDGKFERTLEGHKEGISDIAWSQ 98
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D K + S S ++ WD ++GK L GHK+++ G+S+ P N VS S D
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMV-KTLKGHKEYVFGVSFNP-QSNL----IVSGSFDE 152
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+ RIWDV+ +C +S H+ VT V + DG ++ +GS D T+++W+TT G+L+ +
Sbjct: 153 NVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIST 212
Query: 280 H-GHWVNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAAL----ERY---NKIKGN 327
G V+ + S ++ L G D+T + Y++ ++ K E+Y +
Sbjct: 213 EDGKEVSFVKFSPNGKFVL-AGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVT 271
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSIK 385
+ +V+GS+D ++++ + +T + GH+ +V V P +AS + D+S+K
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQTREIVQT-LAGHEDVVLTVACHPTENIIASGALEKDRSVK 330
Query: 386 LW 387
+W
Sbjct: 331 IW 332
Score = 319 (117.4 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 86/296 (29%), Positives = 150/296 (50%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH K I+ + + P + SAS D +IW K L GH ++ + W
Sbjct: 42 LKGHLKSISSVKFSP-----DGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAW 96
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQ 306
D +I + S D TIK+W+ GK+++ LKGH +V ++ + + L +G+FD +
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Query: 307 YS-SPEEMKKAALERYNKIKG---NAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + E K + + G N LV SGS D T+ +W+ + T T +
Sbjct: 157 WDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGK 216
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWN-GTTGKFVAVFRGHVGPVYQI--SWSAD-SRLL 417
V+ V FSP+G++V + + D +++LW+ K + + GH Y I ++S + +
Sbjct: 217 EVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWI 276
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
++GS+D+ + +++++T+++ Q L GH D V V P +ASG KDR +K+W
Sbjct: 277 VTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 283 (104.7 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 49/119 (41%), Positives = 74/119 (62%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + ++ V FSPDG+W+ASAS DK+IK+W GKF GH + I+WS
Sbjct: 39 KYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQ 98
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DS+L+ S S D T+K+WD+ + K+ + L GH + VF V ++P + SG D +++W
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Score = 165 (63.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 93 RIRPVN--RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-QTPMFKCTGH 149
RI VN C+ I+ H++ V V F+ DG + SGS D TVR+WD T Q T
Sbjct: 155 RIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTED 214
Query: 150 KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
V + +S +GK +++G+ L+ W K +GHK I +
Sbjct: 215 GKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFST---FSVT 271
Query: 210 CRRF-VSASKDGDARIWDVSLRKCVICLSGHT-LAVTCVKWGGDGVIYTGS--QDCTIKV 265
C ++ V+ S+D I+++ R+ V L+GH + +T + +I +G+ +D ++K+
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKI 331
Query: 266 WE 267
W+
Sbjct: 332 WK 333
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 245 (91.3 bits), Expect = 7.6e-32, Sum P(2) = 7.6e-32
Identities = 73/245 (29%), Positives = 121/245 (49%)
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALR-TGAFD 301
TCV G+ +I TGS+D T+++W T I GH + ++A + + ++ +G+ D
Sbjct: 409 TCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGD 468
Query: 302 HTGKQYS---------SPEEMK-KAALERYNK-IKGNAPER---LV-SGSDDFTMFLWEP 346
T K +S P +K ++ + ++K I A R LV +GS+D T +W
Sbjct: 469 RTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRL 528
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
T + GH++ + V FS Q V +AS DK++K+W + G + F GH V
Sbjct: 529 PDLVHVVT-LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVL 587
Query: 407 QISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 466
+ S+ D +S D LK+W++ T + H D+V+A+ E +A+GG D
Sbjct: 588 RASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDA 647
Query: 467 VLKLW 471
V+ LW
Sbjct: 648 VINLW 652
Score = 196 (74.1 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 74/303 (24%), Positives = 132/303 (43%)
Query: 100 CSATIAGHTEAVLSV--AFSPDGRQL-ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
CS +AGH E VLS+ S G L +GS D TVRLW+ +++ + TGH +L +
Sbjct: 393 CSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAV 452
Query: 157 AWSADG-KHLVSGSKAGELQCWDPQ-TGKPSGNPLSGHKKWITGISWEPVHLNAPCRR-- 212
A++ VSGS L+ W + S P++ + + + ++ A R
Sbjct: 453 AFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDS 512
Query: 213 -FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQ 270
+ S+D A IW + V+ L GH + V++ D + T S D T+K+W +
Sbjct: 513 LVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISD 572
Query: 271 GKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHTGKQYSSPEEMKKAALERY-NKI--- 324
G ++ +GH V + T+ + GA D K ++ A +++ +K+
Sbjct: 573 GSCLKTFEGHTSSVLRASFITDGTQFVSCGA-DGLLKLWNVNTSECIATYDQHEDKVWAL 631
Query: 325 -KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
G E + +G D + LW + + + ++ + + V A + K+
Sbjct: 632 AVGKKTEMIATGGGDAVINLWHDSTASDKEDDFRKEEEAILRGQELENA--VLDAEYTKA 689
Query: 384 IKL 386
I+L
Sbjct: 690 IRL 692
Score = 183 (69.5 bits), Expect = 7.6e-32, Sum P(2) = 7.6e-32
Identities = 45/171 (26%), Positives = 84/171 (49%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+TI G ++ + ++A SPD + L S +R+WDL T + GH+ V+ +A A
Sbjct: 54 STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHAS 113
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G L + ++ WD G + + GHK ++ I + P ++ +S S D
Sbjct: 114 GGLLATAGADRKVLVWDVDGGFCT-HYFRGHKGVVSSILFHP---DSNKNILISGSDDAT 169
Query: 222 ARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R+WD++ + KC+ + H AVT + DG+ +++ +D + +W+
Sbjct: 170 VRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Score = 160 (61.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 38/120 (31%), Positives = 63/120 (52%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSR-- 415
GH+ V + G +A+A D+ + +W+ G FRGH G V I + DS
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKN 159
Query: 416 LLLSGSKDSTLKVWDIRTQKLKQD----LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+L+SGS D+T++VWD+ + ++ + H V ++ S DG + S G+D+V+ LW
Sbjct: 160 ILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 151 (58.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 74/313 (23%), Positives = 128/313 (40%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI--A 157
S + G+ E + + F D Q LA + VR++D+ T + + GHK VL +
Sbjct: 351 SKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTC 410
Query: 158 WSADGKHL-VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+ G L V+GSK ++ W+ T K +GH I +++ + FVS
Sbjct: 411 VSSSGNVLIVTGSKDKTVRLWNA-TSKSCIGVGTGHNGDILAVAFAKKSFSF----FVSG 465
Query: 217 SKDGDARIWD-----------VSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIK 264
S D ++W ++L+ + ++ H + V D ++ TGS+D T
Sbjct: 466 SGDRTLKVWSLDGISEDSEEPINLKTRSV-VAAHDKDINSVAVARNDSLVCTGSEDRTAS 524
Query: 265 VWETTQGKLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNK 323
+W + LKGH + S+ ST + + T + D T K ++ + E +
Sbjct: 525 IWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTS 584
Query: 324 IKGNAP-----ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
A + VS D + LW S+ T H+ V + + +A+
Sbjct: 585 SVLRASFITDGTQFVSCGADGLLKLWNVNTSECIAT-YDQHEDKVWALAVGKKTEMIATG 643
Query: 379 SFDKSIKLWNGTT 391
D I LW+ +T
Sbjct: 644 GGDAVINLWHDST 656
Score = 149 (57.5 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 54/219 (24%), Positives = 95/219 (43%)
Query: 237 SGHTLAVTCVKWGGDGVIYTGSQDCTIKVW----------ETTQGKLIRELKGHGHWVNS 286
+G LAV K + +GS D T+KVW E K + H +NS
Sbjct: 446 NGDILAVAFAKKSFSFFV-SGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 287 LALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFT 340
+A++ +L TG+ D T + P+ + L+ + + ++ + ++ V + S D T
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKT 564
Query: 341 MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG 400
+ +W + KT GH V F DG S D +KLWN T + +A +
Sbjct: 565 VKIWAISDGSCLKT-FEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQ 623
Query: 401 HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 439
H V+ ++ + ++ +G D+ + +W T K+D
Sbjct: 624 HEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKED 662
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K+ + G + + SPD + + SA + I++W+ T K + ++GH GPV ++ A
Sbjct: 53 KSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHA 112
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEK--VASGGKDRVLKL 470
LL + D + VWD+ GH V ++ + PD K + SG D +++
Sbjct: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRV 172
Query: 471 W 471
W
Sbjct: 173 W 173
Score = 132 (51.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 40/173 (23%), Positives = 73/173 (42%)
Query: 96 PVN-RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
P+N + + +A H + + SVA + + + +GS D T +W L + GHK +
Sbjct: 486 PINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIF 545
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ +S + +++ S ++ W G GH + S+ +FV
Sbjct: 546 SVEFSTVDQCVMTASGDKTVKIWAISDGSCL-KTFEGHTSSVLRASFI-----TDGTQFV 599
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
S DG ++W+V+ +C+ H V + G +I TG D I +W
Sbjct: 600 SCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 115 (45.5 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 40/166 (24%), Positives = 67/166 (40%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH V+ +A G LA+ D V +WD++ GHK V I +
Sbjct: 93 KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152
Query: 159 SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
D L+SGS ++ WD L+ +K + ++ + L+ SA
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVT--SIALSEDGLTLFSA 210
Query: 217 SKDGDARIWDVSLRKCVICLSGHTL--AVTCVKWGGDGVIYTGSQD 260
+D +WD+ C ++ + + AVT V G + S D
Sbjct: 211 GRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLD 256
Score = 71 (30.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 426 LKVWDIRTQKLKQDLPGHADEVFAVDW--SPDGEK-VASGGKDRVLKLW 471
++V+D+ T L GH + V ++D S G + +G KD+ ++LW
Sbjct: 383 VRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLW 431
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 87/323 (26%), Positives = 157/323 (48%)
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A++ G ++GS + WD +G+ + L GH+ + I++ N + +
Sbjct: 98 VAFNKSGSCFITGSYDRTCKIWDTASGEEL-HTLEGHRNVVYAIAFN----NPYGDKVAT 152
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLI 274
S D ++W KC GHT + C+ + ++ TGS D T K+W+ G+ +
Sbjct: 153 GSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEV 212
Query: 275 RELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAP 329
L GH + SL +T L TG+FDHT + P K L + ++ N
Sbjct: 213 STLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWD 272
Query: 330 ERLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
L++ S D + +W+ A Q + GH V V F+ GQ +A+AS D + ++++
Sbjct: 273 CSLIATASLDKSCKVWD-AEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFS 331
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
T + + GH G + ++ ++A +L+ S D T +VW ++T Q L GH+DE+F
Sbjct: 332 TDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIF 391
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
+ ++ +G+ + +G KD ++W
Sbjct: 392 SCAFNYEGDTIITGSKDNTCRIW 414
Score = 294 (108.6 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 86/335 (25%), Positives = 157/335 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VAF+ G +GS D T ++WD + + GH+N V IA++ G
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK GH I +++ P + S D A
Sbjct: 148 DKVATGSFDKTCKLWSAETGK-CFYTFRGHTAEIVCLAFNP-----QSTLVATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVT--CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + V L+GH + C GD ++ TGS D T +W+ G+ + L GH
Sbjct: 202 KLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLV-TGSFDHTAILWDVPSGRKVHVLSGH 260
Query: 281 GHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLVS- 334
++ + + + +L T + D + K + + A L +N + N +L++
Sbjct: 261 RGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIAT 320
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D T ++ Q ++ GH+ ++ V F+ G V +AS DK+ ++W TG
Sbjct: 321 ASADGTSRVFSTDTF-QCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGAC 379
Query: 395 VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
+ V GH ++ +++ + +++GSKD+T ++W
Sbjct: 380 LQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 277 (102.6 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 80/294 (27%), Positives = 140/294 (47%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW T + GH ++C+A++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD ++G+ L+GH I + + N R V+ S D
Sbjct: 189 STLVATGSMDTTAKLWDVESGEEVST-LAGHFAEIISLCF-----NTTGDRLVTGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
A +WDV + V LSGH ++CV++ D +I T S D + KVW+ G+ + L GH
Sbjct: 243 AILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGH 302
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
V + + T + T + D T + +S+ LE + +K+ NA R+++
Sbjct: 303 NDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
S D T +W + + GH + F+ +G + + S D + ++W+
Sbjct: 363 ASVDKTSRVWCVKTGACLQV-LEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 245 (91.3 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 68/254 (26%), Positives = 123/254 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ +AF+P +A+GS DTT +LWD+ + + GH ++ + +
Sbjct: 168 KCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ G LV+GS WD +G+ + LSGH+ I+ + + N C +AS
Sbjct: 228 NTTGDRLVTGSFDHTAILWDVPSGRKV-HVLSGHRGEISCVQF-----NWDCSLIATASL 281
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD +C+ L GH V C + G +I T S D T +V+ T + + +
Sbjct: 282 DKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ-LIATASADGTSRVFSTDTFQCLCQ 340
Query: 277 LKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNA----PE 330
L+GH ++ + + + + + T + D T + + LE ++ +I A +
Sbjct: 341 LEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGD 400
Query: 331 RLVSGSDDFTMFLW 344
+++GS D T +W
Sbjct: 401 TIITGSKDNTCRIW 414
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P R ++GH + V F+ D +A+ S D + ++WD + GH + VL
Sbjct: 249 PSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLD 308
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ ++ G+ + + S G + + T + L GHK I+ + + NA R ++
Sbjct: 309 VCFNYTGQLIATASADGTSRVFSTDTFQCLCQ-LEGHKGEISKVCF-----NAQGSRVLT 362
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAV-TCV-KWGGDGVIYTGSQDCTIKVW 266
AS D +R+W V C+ L GH+ + +C + GD +I TGS+D T ++W
Sbjct: 363 ASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTII-TGSKDNTCRIW 414
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 399 RGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS-PDGE 457
+ H+ P+ ++++ ++GS D T K+WD + + L GH + V+A+ ++ P G+
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 458 KVASGGKDRVLKLW 471
KVA+G D+ KLW
Sbjct: 149 KVATGSFDKTCKLW 162
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 89/306 (29%), Positives = 156/306 (50%)
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLS 237
P G + + GH K I+ + + +PC +F+ ++S D +IW++S C L+
Sbjct: 65 PGAGYKLISTIEGHTKSISAVKF------SPCGKFLGTSSADKTVKIWNMSDLSCERTLT 118
Query: 238 GHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
GH L V W D I T S D T+K++E K+ + LKGH ++V + + +L
Sbjct: 119 GHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV 178
Query: 297 -TGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSK 350
+G+FD + + + M L ++ + N L+ SGS D + +W+ A +
Sbjct: 179 VSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQ 238
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI-- 408
KT + V V FSP+G+++ S++ D ++KLW+ GK + ++GH Y I
Sbjct: 239 CVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFA 298
Query: 409 SWSADS-RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KD 465
++S + ++SGS+D + VW+++T+++ Q L GH V A D P +ASG D
Sbjct: 299 NFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPD 358
Query: 466 RVLKLW 471
+++W
Sbjct: 359 NTIRIW 364
Score = 305 (112.4 bits), Expect = 6.2e-27, P = 6.2e-27
Identities = 88/302 (29%), Positives = 142/302 (47%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+TI GHT+++ +V FSP G+ L + S D TV++W+++ + TGHK V AWSAD
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSAD 132
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
K +V+ S L+ ++ T K + L GH ++ ++ P VS S D
Sbjct: 133 SKSIVTASDDKTLKIYEVPTVKMA-KTLKGHTNYVFCCNFNP-----QSSLVVSGSFDES 186
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT-GSQDCTIKVWETTQGKLIREL--- 277
RIWDV CV L H+ V+ V + DG + T GS D +++W+T G+ ++ L
Sbjct: 187 VRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDD 246
Query: 278 ----------KGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN 327
+G ++ S L L T KQY E K ++ G
Sbjct: 247 ENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGG- 305
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSIK 385
+ ++SGS+D +++W +K+ + GH Q V P +AS + D +I+
Sbjct: 306 --KWIISGSEDCKIYVWN-LQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIR 362
Query: 386 LW 387
+W
Sbjct: 363 IW 364
Score = 233 (87.1 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 68/223 (30%), Positives = 108/223 (48%)
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMK 314
T SQ+ TI KLI ++GH ++++ S L T + D T K ++ +
Sbjct: 57 TTSQESTIP---GAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSC 113
Query: 315 KAALERY----NKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS 369
+ L + N +A + +V+ SDD T+ ++E K KT + GH V F+
Sbjct: 114 ERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKT-LKGHTNYVFCCNFN 172
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
P V S SFD+S+++W+ TG V H PV +S++ D L+ SGS D +++W
Sbjct: 173 PQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Query: 430 DIRT-QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D Q +K + V V +SP+G+ + S D LKLW
Sbjct: 233 DTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLW 275
Score = 217 (81.4 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 56/209 (26%), Positives = 100/209 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V A+S D + + + S D T++++++ T GH N+V C ++
Sbjct: 113 CERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFN 172
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+VSGS ++ WD +TG L H ++ +S+ N S S D
Sbjct: 173 PQSSLVVSGSFDESVRIWDVRTGM-CVKTLPAHSDPVSAVSF-----NRDGSLITSGSYD 226
Query: 220 GDARIWDVSLRKCVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
G RIWD + +CV L V VK+ +G I + + D T+K+W+ +GK +++
Sbjct: 227 GLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQY 286
Query: 278 KGHGHWVNSLALSTEYALRTGAFDHTGKQ 306
+GH + N + +++ G + +G +
Sbjct: 287 QGHEN--NKYCIFANFSVTGGKWIISGSE 313
Score = 206 (77.6 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 51/190 (26%), Positives = 89/190 (46%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P + + T+ GHT V F+P + SGS D +VR+WD+ T + H + V
Sbjct: 151 PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSA 210
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
++++ DG + SGS G ++ WD G+ + + + + P N + +S
Sbjct: 211 VSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP---NG--KYILS 265
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCV-----KWGGDGVIYTGSQDCTIKVWETTQ 270
++ D ++WD K + GH C+ GG +I +GS+DC I VW
Sbjct: 266 SNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWII-SGSEDCKIYVWNLQT 324
Query: 271 GKLIRELKGH 280
++++ L+GH
Sbjct: 325 KEVVQSLEGH 334
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 101/312 (32%), Positives = 153/312 (49%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV +V FSP+G LAS S D +++W +GHK +
Sbjct: 58 VKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 117
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D + LVSGS L+ W+ TGK S L GH ++ ++ P N
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGK-SLKTLKGHSNYVFCCNFNP-QSNL----I 171
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 231
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 232 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 290
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W SK+ ++ GH V P +ASA+
Sbjct: 291 ANFSVTGGKWIVSGSEDNMVYIWN-LQSKEVVQKLQGHTDTVLCTACHPTENIIASAALE 349
Query: 381 -DKSIKLWNGTT 391
DK+IKLW T
Sbjct: 350 NDKTIKLWKSDT 361
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 88/299 (29%), Positives = 153/299 (51%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 68 LAGHTKAVSAVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 122
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ +GS D T+KVWE + GK ++ LKGH ++V + + L +G+FD
Sbjct: 123 SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 182
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 183 WDVRTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 238
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS- 414
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I ++S
Sbjct: 239 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 298
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+ ++SGS+D+ + +W+++++++ Q L GH D V P +AS D+ +KLW
Sbjct: 299 KWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 282 (104.3 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 51/119 (42%), Positives = 76/119 (63%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + ++WS+
Sbjct: 65 KFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 124
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DSRLL+SGS D TLKVW++ T K + L GH++ VF +++P + SG D +++W
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 345 (126.5 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 82/246 (33%), Positives = 122/246 (49%)
Query: 232 CVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
C+ L GH AV V + D ++ + S D T+K+W+T G L L+GH V S+ S
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 291 TEYALRTGAFDHTGKQYSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWE 345
+ L A D T K + + + LE + I + + L S SDD T+ +W+
Sbjct: 348 HDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Query: 346 PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
T + GH+ V V FS D Q +ASAS D ++K+W+ TG GH V
Sbjct: 408 TGTGSLQHT-LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWV 466
Query: 406 YQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
+ +S DSRLL S S D T+++WD K L GH+ V +V +S D +AS D
Sbjct: 467 RSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASND 526
Query: 466 RVLKLW 471
+ +++W
Sbjct: 527 QTVRIW 532
Score = 324 (119.1 bits), Expect = 4.6e-27, P = 4.6e-27
Identities = 82/260 (31%), Positives = 123/260 (47%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
P L GH+ + +S+ H R SAS D +IWD L GH+ V
Sbjct: 287 PCLQALEGHEAAVLSVSYS--H---DSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLV 341
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH- 302
V + D + + D T+K+W+T G L L+GH WV S+ S + L A D
Sbjct: 342 RSVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 401
Query: 303 TGKQYSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
T K + + + LE + I + + L S SDD T+ +W+ T +
Sbjct: 402 TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHT-LE 460
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLL 417
GH+ V V FS D + +ASAS D+++++W+ G GH V +S+S DSRLL
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLL 520
Query: 418 LSGSKDSTLKVWDIRTQKLK 437
S S D T+++WDI + L+
Sbjct: 521 ASASNDQTVRIWDIEARSLQ 540
Score = 306 (112.8 bits), Expect = 7.8e-25, P = 7.8e-25
Identities = 94/311 (30%), Positives = 142/311 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GH AVLSV++S D R LAS S D TV++WD T + GH + V + +S
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
D + L S S + ++ WD TG + L GH+ W+ + + H + SAS D
Sbjct: 348 HDSRLLASASDS-TVKIWDTGTGSLQ-HTLEGHRDWVRSVIFS--H---DSQLLASASDD 400
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELK 278
+IWD L GH V V + D ++ + S D T+K+W+T G L L+
Sbjct: 401 STVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE 460
Query: 279 GHGHWVNSLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAP----ERLV 333
GH WV S+ S + L A D T + + + + K LE ++ + + RL+
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLL 520
Query: 334 -SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
S S+D T+ +W+ + R H F D + + FDK+ LW T
Sbjct: 521 ASASNDQTVRIWDI------EARSLQHT-------FDLDAT-IEAMRFDKATSLWIQVTV 566
Query: 393 KFVAVFRGHVG 403
K A R +G
Sbjct: 567 K--ASIRSAMG 575
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 95/303 (31%), Positives = 149/303 (49%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-----QTPMFKCTGHKNWVLC 155
S T+ H AV SV FS DGR LAS S D T+R + +NT P+ + TGH+N +
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A+S+D + +VS S L+ WD +TG L GH + +++ P VS
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLI-KTLIGHTNYAFCVNFNP-----QSNMIVS 130
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLI 274
S D RIWDV+ KC+ L H+ VT V + DG +I + S D ++W++ G +
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 275 REL-KGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS-SPEEMKKAALERYNK---IKG-- 326
+ L V+ + S + G D+T + ++ S + K N I
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAF 250
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+R+VSGS+D + +WE SK+ ++ GH + V +V P +AS S DK++
Sbjct: 251 SVTNGKRIVSGSEDNCVHMWE-LNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Query: 385 KLW 387
++W
Sbjct: 310 RIW 312
Score = 284 (105.0 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 76/283 (26%), Positives = 143/283 (50%)
Query: 204 VHLNAPCRRFVSASKDGDARIWDVS-----LRKCVICLSGHTLAVTCVKWGGDG-VIYTG 257
V ++ R SAS D R + ++ + + V +GH ++ V + D I +
Sbjct: 30 VKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSA 89
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQY--SSPEEMK 314
S D T+K+W+ G LI+ L GH ++ + + + + +G+FD T + + ++ + +K
Sbjct: 90 SDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLK 149
Query: 315 --KAALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD 371
A + + N L VS S D +W+ KT + V+ V FSP+
Sbjct: 150 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 209
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS---ADSRLLLSGSKDSTLKV 428
G+++ + D +++LWN ++ KF+ + GHV Y IS + + + ++SGS+D+ + +
Sbjct: 210 GKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHM 269
Query: 429 WDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
W++ ++KL Q L GH + V V P +ASG D+ +++W
Sbjct: 270 WELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 243 (90.6 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 75/260 (28%), Positives = 116/260 (44%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P+ GH + VAFS D R + S S D T++LWD+ T + + GH N+ C
Sbjct: 59 PIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC 118
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ ++ +VSGS ++ WD TGK L H +T + + N VS
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCL-KVLPAHSDPVTAVDF-----NRDGSLIVS 172
Query: 216 ASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL 273
+S DG RIWD CV L V+ V++ +G I G+ D T+++W + K
Sbjct: 173 SSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 274 IRELKGH--GHWVNSLALSTEYALR--TGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
++ GH + S A S R +G+ D+ + + LE + + N
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
Query: 329 --P-ERLV-SGSDDFTMFLW 344
P E L+ SGS D T+ +W
Sbjct: 293 CHPTENLIASGSLDKTVRIW 312
Score = 217 (81.4 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 43/121 (35%), Positives = 71/121 (58%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLW-----NGTTGKFVAVFRGHVGPVYQISW 410
+T H + V+ V FS DG+ +ASAS DK+I+ + N + V F GH + +++
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 411 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 470
S+D+R ++S S D TLK+WD+ T L + L GH + F V+++P + SG D +++
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 471 W 471
W
Sbjct: 140 W 140
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 86/299 (28%), Positives = 153/299 (51%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 15 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 69
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 70 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 129
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 130 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 185
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS- 414
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I ++S
Sbjct: 186 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 245
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+ ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS D+ +KLW
Sbjct: 246 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 5 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 64
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 65 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 118
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 178
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 179 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 237
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 238 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 296
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 297 NDKTIKLW 304
Score = 273 (101.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + ++WS+
Sbjct: 12 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 71
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DS LL+S S D TLK+WD+ + K + L GH++ VF +++P + SG D +++W
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 86/299 (28%), Positives = 153/299 (51%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS- 414
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I ++S
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+ ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS D+ +KLW
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 273 (101.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + ++WS+
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DS LL+S S D TLK+WD+ + K + L GH++ VF +++P + SG D +++W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 86/299 (28%), Positives = 153/299 (51%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS- 414
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I ++S
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+ ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS D+ +KLW
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 273 (101.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + ++WS+
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DS LL+S S D TLK+WD+ + K + L GH++ VF +++P + SG D +++W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 86/299 (28%), Positives = 153/299 (51%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS- 414
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I ++S
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+ ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS D+ +KLW
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 273 (101.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + ++WS+
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DS LL+S S D TLK+WD+ + K + L GH++ VF +++P + SG D +++W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 86/299 (28%), Positives = 153/299 (51%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS- 414
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I ++S
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+ ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS D+ +KLW
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 273 (101.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + ++WS+
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DS LL+S S D TLK+WD+ + K + L GH++ VF +++P + SG D +++W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 86/299 (28%), Positives = 153/299 (51%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS- 414
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I ++S
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+ ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS D+ +KLW
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 273 (101.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + ++WS+
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DS LL+S S D TLK+WD+ + K + L GH++ VF +++P + SG D +++W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEVVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 319 (117.4 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 85/299 (28%), Positives = 152/299 (50%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS- 414
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + H Y I ++S
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGG 271
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+ ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS D+ +KLW
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 273 (101.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 48/119 (40%), Positives = 74/119 (62%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + ++WS+
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DS LL+S S D TLK+WD+ + K + L GH++ VF +++P + SG D +++W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 321 (118.1 bits), Expect = 7.9e-29, P = 7.9e-29
Identities = 94/303 (31%), Positives = 150/303 (49%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW---DLNTQTPMFKCTGHKNWVLCIAWS 159
T+AGH+ A+ SV FSP+G LAS + D + +W D N + ++ GH + +AWS
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLY---GHSLEISDVAWS 90
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+D LVS S L+ WD ++GK L GH ++ + P P VS S D
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCL-KTLKGHSDFVFCCDFNP-----PSNLIVSGSFD 144
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELK 278
+IW+V KC+ LS H+ ++ V + +G +I +GS D ++W+ G+ +R L
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA 204
Query: 279 GHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAA---LERY---NKIKGN 327
G+ V+ + S +Y L T D+T K YS +K E+Y
Sbjct: 205 DEGNPPVSFVKFSPNGKYIL-TATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVT 263
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSIK 385
+ +VSGS+D +++W +K+ R+ GH +V P +ASA+ DK+IK
Sbjct: 264 GRKWVVSGSEDNMVYIWN-LQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIK 322
Query: 386 LWN 388
+W+
Sbjct: 323 VWS 325
Score = 308 (113.5 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 84/295 (28%), Positives = 148/295 (50%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH I+ + + P N S++ D IW C L GH+L ++ V W
Sbjct: 35 LAGHSAAISSVKFSP---NGEW--LASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAW 89
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGK- 305
D + + S D T+KVW+ GK ++ LKGH +V + L +G+FD + K
Sbjct: 90 SSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKI 149
Query: 306 -QYSSPEEMK--KAALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + + +K A + + + N L VSGS D +W+ A + +T
Sbjct: 150 WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADSRL-LL 418
V+ V FSP+G+++ +A+ D ++KLW+ + G+ + + GH Y + S+S R ++
Sbjct: 210 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVV 269
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
SGS+D+ + +W+++T+++ Q L GH D V + P +AS D+ +K+W
Sbjct: 270 SGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 235 (87.8 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 56/183 (30%), Positives = 96/183 (52%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH+ + VA+S D +L S S D T+++WD+ + + GH ++V C ++
Sbjct: 73 CKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFN 132
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+VSGS ++ W+ +TGK LS H I+ +++ N VS S D
Sbjct: 133 PPSNLIVSGSFDESVKIWEVKTGKCL-KTLSAHSDPISAVNF-----NCNGSLIVSGSYD 186
Query: 220 GDARIWDVSLRKCVICLSGH-TLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
G RIWD + +C+ L+ V+ VK+ +G I T + D T+K+W+ ++G+ ++
Sbjct: 187 GLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 246
Query: 278 KGH 280
GH
Sbjct: 247 TGH 249
Score = 233 (87.1 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 64/249 (25%), Positives = 124/249 (49%)
Query: 234 ICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
+ L+GH+ A++ VK+ +G + + + D I +W G + L GH ++ +A S++
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSD 92
Query: 293 YA-LRTGAFDHTGKQYSSPEEMKKAALERYNKI----KGNAPERL-VSGSDDFTMFLWEP 346
+ L + + D T K + L+ ++ N P L VSGS D ++ +WE
Sbjct: 93 SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP-V 405
K KT ++ H ++ V F+ +G + S S+D ++W+ +G+ + P V
Sbjct: 153 KTGKCLKT-LSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPV 211
Query: 406 YQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPDGEK-VASG 462
+ +S + + +L+ + D+TLK+WD + + GH +E + + +S G K V SG
Sbjct: 212 SFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSG 271
Query: 463 GKDRVLKLW 471
+D ++ +W
Sbjct: 272 SEDNMVYIW 280
Score = 198 (74.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 53/218 (24%), Positives = 104/218 (47%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GH++ V F+P + SGS D +V++W++ T + + H + + + +
Sbjct: 114 KCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNF 173
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ +G +VSGS G + WD +G+ ++ + + P N + ++A+
Sbjct: 174 NCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSP---NG--KYILTATL 228
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCV----KWGGDGVIYTGSQDCTIKVWETTQGKLI 274
D ++WD S +C+ +GH C+ G + +GS+D + +W +++
Sbjct: 229 DNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIV 288
Query: 275 RELKGHGHWVNSLALS-TEYALRTGAF--DHTGKQYSS 309
+ L+GH V S A T+ + + A D T K +SS
Sbjct: 289 QRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSS 326
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 314 (115.6 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 81/296 (27%), Positives = 151/296 (51%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L GH K I+ + +PC +++ ++S D +IW++ C L+GH L V +
Sbjct: 83 LEGHTKSISSAKF------SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 248 WGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGK 305
W D + + S D T+K++E ++ + LKGH ++V + + +L +G+FD + +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 306 QYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ M L ++ + N L+ SGS D + +W+ A + KT +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS-RLL 417
V V FSP+G+++ +++ D ++KLW+ + GK + + GH Y I ++S + +
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWI 316
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+SGS+D + +W+++T+++ Q L GH V A D P +ASG D + +W
Sbjct: 317 ISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 288 (106.4 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 86/303 (28%), Positives = 144/303 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT+++ S FSP G+ L + S D TV++W+++ TGHK V IAWS+D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VS S L+ ++ T + + L GH ++ ++ P VS S D
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMT-KTLKGHNNYVFCCNFNP-----QSSLVVSGSFDESV 195
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL---- 277
RIWDV C+ L H+ V+ V + DG +I +GS D +++W+T G+ I+ L
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 278 ---------KGHGHWVNSLALSTEYALRTGAFDH--TGKQYSSPEEMKKAALERYNKIKG 326
+G ++ LA + + L+ F T KQY+ E K ++ G
Sbjct: 256 NPPVAFVKFSPNGKYI--LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGG 313
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSI 384
+ ++SGS+D +++W +++ + GH Q V P +AS + D I
Sbjct: 314 ---KWIISGSEDCKIYIWN-LQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Query: 385 KLW 387
+W
Sbjct: 370 HIW 372
Score = 239 (89.2 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 65/208 (31%), Positives = 105/208 (50%)
Query: 272 KLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIK 325
KL+ L+GH ++S S +Y L T + D T K ++ + + L + N I
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKY-LGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 326 GNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
++ R +VS SDD T+ ++E S+ KT + GH V F+P V S SFD+S+
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKT-LKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT-QKLKQDLPGH 443
++W+ TG + H PV +S++ D L+ SGS D +++WD Q +K +
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 444 ADEVFAVDWSPDGEKVASGGKDRVLKLW 471
V V +SP+G+ + + D LKLW
Sbjct: 256 NPPVAFVKFSPNGKYILASNLDSTLKLW 283
Score = 225 (84.3 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 76/270 (28%), Positives = 119/270 (44%)
Query: 16 TDPEGNPL-GAPMYFPQ-NAGPQQLSQIVN-KLLNNEEKLPYAFYISDHELLVPLGSYLE 72
++P G P GA P NA S N KL+ E + IS + P G YL
Sbjct: 47 SNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEG--HTKSISSAKFS-PCGKYLG 103
Query: 73 KHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTV 132
S +K + I + C T+ GH V +A+S D R + S S D T+
Sbjct: 104 TS--SADKTVKIWNMDHMI--------CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 133 RLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH 192
+++++ T GH N+V C ++ +VSGS ++ WD +TG L H
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI-KTLPAH 212
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGD 251
++ +S+ N S S DG RIWD + +C+ L V VK+ +
Sbjct: 213 SDPVSAVSF-----NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
G I + D T+K+W+ ++GK +++ GH
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 314 (115.6 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 81/296 (27%), Positives = 151/296 (51%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L GH K I+ + +PC +++ ++S D +IW++ C L+GH L V +
Sbjct: 83 LEGHTKSISSAKF------SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 248 WGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGK 305
W D + + S D T+K++E ++ + LKGH ++V + + +L +G+FD + +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 306 QYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ M L ++ + N L+ SGS D + +W+ A + KT +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI--SWSADS-RLL 417
V V FSP+G+++ +++ D ++KLW+ + GK + + GH Y I ++S + +
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWI 316
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KDRVLKLW 471
+SGS+D + +W+++T+++ Q L GH V A D P +ASG D + +W
Sbjct: 317 ISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 288 (106.4 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 86/303 (28%), Positives = 144/303 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT+++ S FSP G+ L + S D TV++W+++ TGHK V IAWS+D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VS S L+ ++ T + + L GH ++ ++ P VS S D
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMT-KTLKGHNNYVFCCNFNP-----QSSLVVSGSFDESV 195
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL---- 277
RIWDV C+ L H+ V+ V + DG +I +GS D +++W+T G+ I+ L
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 278 ---------KGHGHWVNSLALSTEYALRTGAFDH--TGKQYSSPEEMKKAALERYNKIKG 326
+G ++ LA + + L+ F T KQY+ E K ++ G
Sbjct: 256 NPPVAFVKFSPNGKYI--LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGG 313
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSI 384
+ ++SGS+D +++W +++ + GH Q V P +AS + D I
Sbjct: 314 ---KWIISGSEDCKIYIWN-LQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Query: 385 KLW 387
+W
Sbjct: 370 HIW 372
Score = 239 (89.2 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 65/208 (31%), Positives = 105/208 (50%)
Query: 272 KLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIK 325
KL+ L+GH ++S S +Y L T + D T K ++ + + L + N I
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKY-LGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 326 GNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
++ R +VS SDD T+ ++E S+ KT + GH V F+P V S SFD+S+
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKT-LKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT-QKLKQDLPGH 443
++W+ TG + H PV +S++ D L+ SGS D +++WD Q +K +
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 444 ADEVFAVDWSPDGEKVASGGKDRVLKLW 471
V V +SP+G+ + + D LKLW
Sbjct: 256 NPPVAFVKFSPNGKYILASNLDSTLKLW 283
Score = 225 (84.3 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 76/270 (28%), Positives = 119/270 (44%)
Query: 16 TDPEGNPL-GAPMYFPQ-NAGPQQLSQIVN-KLLNNEEKLPYAFYISDHELLVPLGSYLE 72
++P G P GA P NA S N KL+ E + IS + P G YL
Sbjct: 47 SNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEG--HTKSISSAKFS-PCGKYLG 103
Query: 73 KHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTV 132
S +K + I + C T+ GH V +A+S D R + S S D T+
Sbjct: 104 TS--SADKTVKIWNMDHMI--------CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 133 RLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH 192
+++++ T GH N+V C ++ +VSGS ++ WD +TG L H
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI-KTLPAH 212
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGD 251
++ +S+ N S S DG RIWD + +C+ L V VK+ +
Sbjct: 213 SDPVSAVSF-----NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
G I + D T+K+W+ ++GK +++ GH
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 221 (82.9 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 63/201 (31%), Positives = 94/201 (46%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
RP + S T GH ++ V F P + S S D T+R+WD T GH + V
Sbjct: 97 RPPEKFSLT--GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQ 154
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+A+ A GK L S S ++ WD Q + GH ++ +++ P +
Sbjct: 155 DVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAG-----DYVL 209
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
SAS+D ++W+V+ CV +GH V V+ +G I+ T S D TI+VW T
Sbjct: 210 SASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDC 269
Query: 274 IRELKGHGHWVNSLALSTEYA 294
EL+ H H V +A + E A
Sbjct: 270 KVELRDHEHTVECIAWAPEAA 290
Score = 212 (79.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 54/187 (28%), Positives = 97/187 (51%)
Query: 289 LSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS---DDFTMFLWE 345
LSTE + G K+++S ++K +E K+ A + ++ G+ + T W
Sbjct: 39 LSTEVEKKFGGL--LEKKWTSVIRLQKKVMELEAKLT-EAEKEVIEGAPTKNKRTPGEWI 95
Query: 346 PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
P + K +TGH+ + V F P + SAS D +I++W+ TG++ +GH V
Sbjct: 96 PRPPE--KFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSV 153
Query: 406 YQISWSADSRLLLSGSKDSTLKVWDIR-TQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 464
+++ A +LL S S D ++K+WD + + + + + GH V +V + P G+ V S +
Sbjct: 154 QDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASR 213
Query: 465 DRVLKLW 471
DR +K+W
Sbjct: 214 DRTIKMW 220
Score = 175 (66.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 48/170 (28%), Positives = 82/170 (48%)
Query: 287 LALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG-SDDFTMFLWE 345
++ S + +R F+ TG +Y E K + + +A +L++ S D ++ LW+
Sbjct: 124 VSASEDATIRIWDFE-TG-EY---ERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWD 178
Query: 346 PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
S + M GH V+ V F P G +V SAS D++IK+W TG V + GH V
Sbjct: 179 FQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWV 238
Query: 406 YQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ + + + S D T++VW ++ K +L H V + W+P+
Sbjct: 239 RMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPE 288
Score = 172 (65.6 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ + ++ + GH V V F G+ +AS S D SIKLW+
Sbjct: 123 MVSASEDATIRIWDFETGEYERS-LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQ 181
Query: 392 G-KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+ + GH V +++ +LS S+D T+K+W++ T + GH + V V
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMV 241
Query: 451 DWSPDGEKVASGGKDRVLKLWM 472
+G A+ D+ +++W+
Sbjct: 242 RVHIEGSIFATCSNDQTIRVWL 263
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 64/224 (28%), Positives = 103/224 (45%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
+SAS+D ++W+V+ CV +GH V V+ +G I+ C+ +
Sbjct: 209 LSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFA---TCS-------NDQT 258
Query: 274 IRELKGHGHWV-NSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERY---NKIKGNA 328
IR W+ NS E LR +HT + + +PE A E NK +
Sbjct: 259 IRV------WLTNSKDCKVE--LRD--HEHTVECIAWAPEAAASAINEAAGADNKKGHHQ 308
Query: 329 PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
L SGS D T+ +W+ +V T ++GH V + F P G+++ SAS DK+I++W+
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLT-LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWD 367
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H I + ++SGS D T+KVW+ R
Sbjct: 368 LRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 154 (59.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/107 (33%), Positives = 55/107 (51%)
Query: 120 GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP 179
G LASGS D T+R+WD++ + +GH NWV +A+ GK+LVS S ++ WD
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 180 QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
+ K L H+ + T I + H P +S S D ++W+
Sbjct: 369 RN-KRCMKTLYAHQHFCTSIDFHKAH---PY--VISGSVDQTVKVWE 409
Score = 153 (58.9 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 34/128 (26%), Positives = 60/128 (46%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P + G H G ++AS S DK+I++W+ + G + GH
Sbjct: 285 WAPEAAASAINEAAGADNKKGH----HQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDN 340
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V +++ + L+S S D T++VWD+R ++ + L H ++D+ V SG
Sbjct: 341 WVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGS 400
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 401 VDQTVKVW 408
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
V C T++GH V +AF P G+ L S S D T+R+WDL + M H+++ I
Sbjct: 328 VGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 387
Query: 157 AWSADGKHLVSGSKAGELQCWD 178
+ +++SGS ++ W+
Sbjct: 388 DFHKAHPYVISGSVDQTVKVWE 409
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 307 (113.1 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 86/289 (29%), Positives = 146/289 (50%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GH+ IT + + LN ++ S S D +IW + + CL GH AV CV++
Sbjct: 18 GHRDAITSVDFS---LNK--KQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSP 72
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ +GS+D T+ +W + +G+ K H V S+ S++ +L T + D T K +
Sbjct: 73 SGHLVASGSRDKTVCLWVPSVKGEST-VFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 308 SSPEEMKKAALERY-NKIKGN--APE-RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ + +L ++ N ++ +P+ RL+ S SDD T+ LW+ S++ H
Sbjct: 132 TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKT-SRECIHSFCEHGGF 190
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
NHV F P G +A+A DK++K+W+ + + ++ H V +S+ L++ S
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASN 250
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DSTLK+ D+ +L L GH V +S G+ ASGG D + +W
Sbjct: 251 DSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 285 (105.4 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 86/309 (27%), Positives = 143/309 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +A+ SV FS + +QLASGS D+ +++W + Q + GHK+ V+C+ +S G HL
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSG-HL 76
Query: 166 V-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
V SGS+ + W P K H + VH ++ + V+AS D ++
Sbjct: 77 VASGSRDKTVCLWVPSV-KGESTVFKAHTATVRS-----VHFSSDGQSLVTASDDKTIKV 130
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W V +K + LS H V C ++ DG +I + S D T+K+W+ T + I HG +
Sbjct: 131 WTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF 190
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGN-APERLVS 334
N + + D T K + M + L+ Y N + + + L++
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDV--RMNRL-LQHYQVHTAAVNSLSFHPSGNYLIT 247
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTG 392
S+D T+ + + + T + GHQ V FS G + AS D+ + +W N +
Sbjct: 248 ASNDSTLKILDLLEGRLLYT-LHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTNFSAA 306
Query: 393 KFVAVFRGH 401
+ V + H
Sbjct: 307 DYDGVLKTH 315
Score = 244 (91.0 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 60/205 (29%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV FS DG+ L + S D T+++W ++ Q +F + H NWV C +S
Sbjct: 97 STVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP 156
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ + S S ++ WD +T + + H + + + P + C +A D
Sbjct: 157 DGRLIASASDDKTVKLWD-KTSRECIHSFCEHGGFANHVEFHP---SGTC--IAAAGTDK 210
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + + HT AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 211 TVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHG 270
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H +A S RTG F +G
Sbjct: 271 HQGPATCVAFS-----RTGDFFASG 290
Score = 241 (89.9 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 65/205 (31%), Positives = 101/205 (49%)
Query: 273 LIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
L R +GH + S+ S + L +G+ D K +S +M+ L + ++ +
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 328 APERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
LV SGS D T+ LW P+V K T H V V+FS DGQ + +AS DK+IK+
Sbjct: 72 PSGHLVASGSRDKTVCLWVPSV-KGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKV 130
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W KF+ H+ V +S D RL+ S S D T+K+WD +++ H
Sbjct: 131 WTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF 190
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V++ P G +A+ G D+ +K+W
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVW 215
Score = 223 (83.6 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 67/220 (30%), Positives = 105/220 (47%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLNTQTPMFKCTG 148
++ ++P R + GH +AV+ V FSP G +ASGS D TV LW + ++ +FK
Sbjct: 46 IWSMKPQMRAYCLV-GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKA-- 102
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V + +S+DG+ LV+ S ++ W K + LS H W+ + P
Sbjct: 103 HTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFS-LSQHINWVRCARFSP----- 156
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R SAS D ++WD + R+C+ H V++ G I D T+KVW+
Sbjct: 157 DGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWD 216
Query: 268 TTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VNSL+ S Y + T + D T K
Sbjct: 217 VRMNRLLQHYQVHTAAVNSLSFHPSGNYLI-TASNDSTLK 255
Score = 162 (62.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
FRGH + + +S + + L SGS DS LK+W ++ Q L GH D V V +SP G
Sbjct: 16 FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGH 75
Query: 458 KVASGGKDRVLKLWM 472
VASG +D+ + LW+
Sbjct: 76 LVASGSRDKTVCLWV 90
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R +NR HT AV S++F P G L + S D+T+++ DL ++ GH+
Sbjct: 214 VWDVR-MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQ 272
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCW 177
C+A+S G SG ++ W
Sbjct: 273 GPATCVAFSRTGDFFASGGSDEQVMVW 299
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 329 (120.9 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 66/140 (47%), Positives = 90/140 (64%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L SGSDD T+ LW+PA +T + GH V V FSPDG+ +AS SFDK+++LW+ T
Sbjct: 710 LASGSDDETVRLWDPATGSLQQT-LEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
G RGH V +++S D RLL SGS D T+++WD T L+Q L GH+D V +V
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVA 828
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+SPDG +ASG D+ ++LW
Sbjct: 829 FSPDGRLLASGSFDKTVRLW 848
Score = 253 (94.1 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 65/157 (41%), Positives = 80/157 (50%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVN-RCSATIAGHTEAVLSVAFSPDGRQLASGSGD 129
LE H SV VL+ + V P T+ GH+ VLSVAFSPDGR LASGS D
Sbjct: 699 LEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFD 758
Query: 130 TTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPL 189
TVRLWD T + GH NWV +A+S DG+ L SGS ++ WDP TG L
Sbjct: 759 KTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQ-QTL 817
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
GH + +++ P R S S D R+WD
Sbjct: 818 RGHSDTVRSVAFSP-----DGRLLASGSFDKTVRLWD 849
Score = 247 (92.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 54/130 (41%), Positives = 76/130 (58%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L SGS D T+ LW+PA +T + GH V V FSPDG+ +AS SFDK+++LW+ T
Sbjct: 752 LASGSFDKTVRLWDPATGSLQQT-LRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPAT 810
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
G RGH V +++S D RLL SGS D T+++WD T L+Q L V +
Sbjct: 811 GSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT-VTELQ 869
Query: 452 WSPDGEKVAS 461
+S DG +++
Sbjct: 870 FSQDGSYIST 879
Score = 204 (76.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 57/193 (29%), Positives = 98/193 (50%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
++KW + H N+ S S D R+WD + L GH+ V V + D
Sbjct: 689 NEKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPD 748
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS 309
G ++ +GS D T+++W+ G L + L+GH +WV S+A S + L +G+FD T + +
Sbjct: 749 GRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDP 808
Query: 310 PEEMKKAALERYNK-IKGNA--PE-RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+ L ++ ++ A P+ RL+ SGS D T+ LW+PA +T + + V
Sbjct: 809 ATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLII--KGTVT 866
Query: 365 HVYFSPDGQWVAS 377
+ FS DG ++++
Sbjct: 867 ELQFSQDGSYIST 879
Score = 194 (73.4 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 42/80 (52%), Positives = 51/80 (63%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+ V SVAFSPDGR LASGS D TVRLWD T + GH + V +A+S DG
Sbjct: 774 TLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDG 833
Query: 163 KHLVSGSKAGELQCWDPQTG 182
+ L SGS ++ WDP TG
Sbjct: 834 RLLASGSFDKTVRLWDPATG 853
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 43/116 (37%), Positives = 60/116 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH++ V SVAFSPDGR LASGS D TVRLWD T T + + K V + +S DG
Sbjct: 816 TLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGT-LQQTLIIKGTVTELQFSQDG 874
Query: 163 KHLVS--GSKAGELQCWDPQTGKPS--GNPLSGHKKWIT--G--ISWEPVHLNAPC 210
++ + GS + +C + + P + L WI+ G + W P C
Sbjct: 875 SYISTNLGSLNIQSRCGNNLSSSPKMHSDILINGPDWISVNGREVLWLPPEARPSC 930
Score = 141 (54.7 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 37/111 (33%), Positives = 56/111 (50%)
Query: 368 FSPDGQWVASASFDKSIKLW-------NGTTGKFVAVFRGHVGPVYQISWSADSRLLLSG 420
F+P + S +F + + W N G + GH V W+ +L SG
Sbjct: 663 FAPQTALIRS-NFSEDLPSWICQLPKVNEKWGAELQTLEGHSNSV----WA----VLASG 713
Query: 421 SKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S D T+++WD T L+Q L GH+ V +V +SPDG +ASG D+ ++LW
Sbjct: 714 SDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLW 764
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 307 (113.1 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 90/331 (27%), Positives = 145/331 (43%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH + SV F P + S S D T+++WD + GH N V I + G
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD QT L GH ++ + + P + +S+S+D +
Sbjct: 162 LLASCSADLTIKLWDFQT-YDCVKTLHGHDHNVSCVRFTPSG-----DQLISSSRDKTIK 215
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+ + C+ L GH V + DG I + S D TIK W +G+ + + H H
Sbjct: 216 VWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSH 275
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
V LA ST D G S+PE K + G L +GS D T+
Sbjct: 276 VVECLAFST-----ANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGY-LATGSRDKTIK 329
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV-AVFRGH 401
+WE A + T + GH V V F P G+++ S DK+I++W+ G+ + + H
Sbjct: 330 IWELATGRCLATYI-GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAH 388
Query: 402 VGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + + + + +G D +KVW ++
Sbjct: 389 THFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 298 (110.0 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 91/330 (27%), Positives = 157/330 (47%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-H 205
TGH+N + + + +VS S+ ++ WD ++G+ L GH + I ++ +
Sbjct: 103 TGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFE-RTLKGHTNAVQDIDFDKTGN 161
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCTI 263
L A C S D ++WD CV L GH V+CV++ GD +I + S+D TI
Sbjct: 162 LLASC------SADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLI-SSSRDKTI 214
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN 322
KVWE G I+ L GH WV + +S + + + + + D T K ++ +K L Y
Sbjct: 215 KVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI---VKGECLATYR 271
Query: 323 KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ + E L + + + + K+++ +Q G ++A+ S DK
Sbjct: 272 E-HSHVVECLAFSTANIIDIPGSLLSTPEGKSKV---KQGPGGNLVGQCG-YLATGSRDK 326
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK-LKQDLP 441
+IK+W TG+ +A + GH V + + + LLS D T++VWDI + +K
Sbjct: 327 TIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINE 386
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H + +D+ +A+GG D V+K+W
Sbjct: 387 AHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 230 (86.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 78/290 (26%), Positives = 127/290 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT AV + F G LAS S D T++LWD T + GH + V C+ ++ G
Sbjct: 143 TLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG 202
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L+S S+ ++ W+ TG L GH+ W+ I+ V + C S S D
Sbjct: 203 DQLISSSRDKTIKVWEAATGYCI-KTLVGHEDWVRKIT---VSEDGSC--IASCSNDQTI 256
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+ W++ +C+ H+ V C+ + +I D + T +GK + +G G
Sbjct: 257 KTWNIVKGECLATYREHSHVVECLAFSTANII-----DIPGSLLSTPEGKS-KVKQGPG- 309
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA-LERYNKIKGNA--P--ERLVSGSD 337
+L Y L TG+ D T K + A + N ++ P + L+S D
Sbjct: 310 --GNLVGQCGY-LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGD 366
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
D T+ +W+ A + KT H ++ + F +A+ D IK+W
Sbjct: 367 DKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 225 (84.3 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 44/128 (34%), Positives = 71/128 (55%)
Query: 345 EPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
E A+ + P+ +TGH+ +N V F P + SAS D +IK+W+ +G+F +GH
Sbjct: 90 EDALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTN 149
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V I + LL S S D T+K+WD +T + L GH V V ++P G+++ S
Sbjct: 150 AVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSS 209
Query: 464 KDRVLKLW 471
+D+ +K+W
Sbjct: 210 RDKTIKVW 217
Score = 174 (66.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 73/295 (24%), Positives = 126/295 (42%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
P + L+GH+ I + + P VSAS+D ++WD + L GHT AV
Sbjct: 97 PEKHILTGHRNCINSVKFHPSF-----SLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 244 TCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAFD 301
+ + G ++ + S D TIK+W+ ++ L GH H V+ + + L + + D
Sbjct: 152 QDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 302 HTGKQYSSPEEMKKAALERYN----KIKGNAPERLVSG-SDDFTMFLWEPAVSKQPKTRM 356
T K + + L + KI + ++ S+D T+ W V +
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN-IVKGECLATY 270
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
H +V + FS + D L + GK V +G G +
Sbjct: 271 REHSHVVECLAFS------TANIIDIPGSLLSTPEGKS-KVKQGPGGNLV-----GQCGY 318
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L +GS+D T+K+W++ T + GH + V AV + P G+ + S G D+ +++W
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 134 (52.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V V F+P G QL S S D T+++W+ T + GH++WV I S
Sbjct: 182 CVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVS 241
Query: 160 ADGKHLVSGSKAGELQCWDPQTGK 183
DG + S S ++ W+ G+
Sbjct: 242 EDGSCIASCSNDQTIKTWNIVKGE 265
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 301 (111.0 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 83/275 (30%), Positives = 141/275 (51%)
Query: 214 VSASKDGDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQ 270
+S+ D IW V C V+ +SGH+ AV + DG I+T S D T+ W+
Sbjct: 71 LSSGFDRQIYIWQV-YEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIAT 129
Query: 271 GKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIK--- 325
G+ R KGHG++VNS+ S + L +G+ D T K + + ++ LE ++
Sbjct: 130 GQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVC 189
Query: 326 -GNAPERLVSGSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFDKS 383
G+ E+++SG D + +W+ + KQ + GH + + SP+G ++ + + D +
Sbjct: 190 FGDTGEQVISGGIDNEVKIWD--IRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNT 247
Query: 384 IKLWNG---TTG-KFVAVFRGHVGP----VYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
+++W+ G + V VF+GH + + +WS S + SGS D + +WD+ T++
Sbjct: 248 LRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRR 307
Query: 436 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 470
+ LPGH V AVD+SP + SG D+ L L
Sbjct: 308 ILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 232 (86.7 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 73/299 (24%), Positives = 128/299 (42%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTP-MFKCTGHKNWVLCIAWSADG 162
+ GH + + F P+G L S D + +W + + +GH V+ ++ DG
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+ + S L WD TG+ GH ++ + C S S D
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQRQRR-FKGHGNFVNSVQGSRRGQQLLC----SGSDDRTI 165
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD + L VT V +G G + +G D +K+W+ + ++ L+GH
Sbjct: 166 KIWDARKKHAAHTLES-PFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHS 224
Query: 282 HWVNSLALSTEYA-LRTGAFDHT-----GKQYSSPEEMKKAALERYNKIKGN------AP 329
+ ++LS E + T A D+T + Y+ E K + + N +P
Sbjct: 225 DTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP 284
Query: 330 --ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+++ SGS D +++W+ +++ ++ GH VN V FSP + S S DK++ L
Sbjct: 285 GSDKITSGSADRHVYIWD-VNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 208 (78.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 48/143 (33%), Positives = 74/143 (51%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L+S D +++W+ + M+GH V +F+PDG + + S DK++ W+
Sbjct: 68 ELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDI 127
Query: 390 TTGKFVAVFRGHVGPVYQISWSA-DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
TG+ F+GH V + S +LL SGS D T+K+WD R + L +V
Sbjct: 128 ATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPF-QVT 186
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
AV + GE+V SGG D +K+W
Sbjct: 187 AVCFGDTGEQVISGGIDNEVKIW 209
Score = 180 (68.4 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV-ASASFDKSIKLWNGTTGKF 394
S D T+ W+ A ++ + R GH VN V S GQ + S S D++IK+W+ K
Sbjct: 117 STDKTLAFWDIATGQRQR-RFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK-KH 174
Query: 395 VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP 454
A V + + ++SG D+ +K+WDIR Q + L GH+D + + SP
Sbjct: 175 AAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSP 234
Query: 455 DGEKVASGGKDRVLKLW 471
+G+ + + D L++W
Sbjct: 235 EGDFILTNAMDNTLRVW 251
Score = 179 (68.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 70/309 (22%), Positives = 129/309 (41%)
Query: 138 NTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWIT 197
N Q P+ + GH+ + + +G+ L+S ++ W + +SGH +
Sbjct: 43 NLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGH----S 98
Query: 198 GISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIY 255
G E H + S D WD++ + GH V V+ G ++
Sbjct: 99 GAVME-AHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLC 157
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMK 314
+GS D TIK+W+ + L+ V ++ T + +G D+ K + ++
Sbjct: 158 SGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV 216
Query: 315 KAALERYNK-IKGNA--PER--LVSGSDDFTMFLWE--PAVSKQPKTRM-TGHQQLVN-- 364
L ++ I G + PE +++ + D T+ +W+ P + ++ GHQ
Sbjct: 217 LHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKN 276
Query: 365 --HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
+SP + S S D+ + +W+ T + + GH G V + +S L+LSGS
Sbjct: 277 LLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSS 336
Query: 423 DSTLKVWDI 431
D TL + +I
Sbjct: 337 DKTLYLGEI 345
Score = 162 (62.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 49/175 (28%), Positives = 81/175 (46%)
Query: 105 AGHT-EA---VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
A HT E+ V +V F G Q+ SG D V++WD+ Q + GH + + ++ S
Sbjct: 175 AAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSP 234
Query: 161 DGKHLVSGSKAGELQCWD--PQT-GKPSGNPLSGHK----KWITGISWEPVHLNAPCRRF 213
+G +++ + L+ WD P G+ GH+ K + +W P +
Sbjct: 235 EGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP-----GSDKI 289
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWE 267
S S D IWDV+ R+ + L GH +V V + + +I +GS D T+ + E
Sbjct: 290 TSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGE 344
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 300 (110.7 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 86/289 (29%), Positives = 145/289 (50%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GH+ IT + + LN ++ S S D +W + + +GH AVTCV +
Sbjct: 17 GHRDAITSVDFS---LNT--KQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSP 71
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ +GS+D T+++W +G+ + H V S+ ++ +L T + D T K +
Sbjct: 72 SGHLLASGSRDKTVRIWIPNVKGEST-VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 308 SSPEEMKKAALERY-NKIKGN--APE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
S+ + +L ++ N ++ +P+ RL VS SDD T+ LW+ S++ H
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT-SRECVHSYCEHGGF 189
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
V +V F P G +A+AS D ++K+W+ T + + ++ H V +S+ LL+ S
Sbjct: 190 VTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASS 249
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DSTLK+ D+ +L L GH V +S GE ASGG D + +W
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 278 (102.9 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 79/292 (27%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +A+ SV FS + +QLASGS D+ + +W + Q+ ++ GHK+ V C+ +S G L
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + V+AS D ++W
Sbjct: 77 ASGSRDKTVRIWIPNV-KGESTVFRAHTATVRS-----VHFCSDGQSLVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C ++ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLVSG 335
+ + + D+T K + ++ AA+ + GN L++
Sbjct: 191 TYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY---LLTA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 250 (93.1 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 61/205 (29%), Positives = 100/205 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ L + S D TV++W + Q +F + H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +AS D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAASMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 245 (91.3 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 73/218 (33%), Positives = 105/218 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ ++P +R + AGH +AV V FSP G LASGS D TVR+W N + H
Sbjct: 45 VWHMKPQSR-AYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHT 103
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + + +DG+ LV+ S ++ W K + LS H W+ + P
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFS-LSQHINWVRCARFSP-----DG 157
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VSAS D ++WD + R+CV H VT V + G I S D T+KVW+
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217
Query: 270 QGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VN+L+ S Y L T + D T K
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLL-TASSDSTLK 254
Score = 152 (58.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH + + +S +++ L SGS DS L VW ++ Q GH D V V++SP G
Sbjct: 15 FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGH 74
Query: 458 KVASGGKDRVLKLWM 472
+ASG +D+ +++W+
Sbjct: 75 LLASGSRDKTVRIWI 89
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 323 (118.8 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 114/395 (28%), Positives = 184/395 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-------QTPMFKCTGHKN- 151
C T+ GHT +V FSPD + LAS S D T++LWD+ + F ++
Sbjct: 735 CRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQ 794
Query: 152 -----WVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
V C +WSADG LV +K ++ ++ TG +GH I + P +
Sbjct: 795 EDMEVMVKCCSWSADGASLVVAAK-NKVLLFNIHTGGLLAEIHTGHHSTIQYCDFSPSNH 853
Query: 207 NAPCRRFVSASKDGDARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIK 264
A V A +W++ S K C GH V C + DG + T S D TI+
Sbjct: 854 LA-----VVALSQYCVELWNMDSCLKVADC-RGHLSWVHCAMFSPDGSSFLTSSDDETIR 907
Query: 265 VWETTQ----GKLIRELKGHGHWVNS--LALSTEYALRTGAFD-HTGK-QYSSPEEMKKA 316
+WET + ++ K + + + L+ + R + TG+ Y + ++
Sbjct: 908 LWETKKVCKNSAIVLNKKIDVVFQENEVMVLAVDNIRRLQVINGKTGQIDYLTEAQVSCC 967
Query: 317 ALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
L + + L GSDD + + E ++ ++R T H+ V H+ F+ DG+ V
Sbjct: 968 CLSPHLQY-------LAFGSDDGAIQVLELLNNRLFQSR-TRHKNTVRHIQFTTDGKNVI 1019
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
S+S D +I++WN + + V++ + H V +SRLL S S D T+KVW+I T ++
Sbjct: 1020 SSSDDSAIQVWNWQSEETVSL-QAHQETVKDFRLLKNSRLL-SWSFDGTVKVWNIITGRI 1077
Query: 437 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
++D H D V + D SPD K +S D+ K+W
Sbjct: 1078 EKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1112
Score = 190 (71.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 45/144 (31%), Positives = 77/144 (53%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+R+ S D T+ +++ A + + + H+ V FS D +++A+ S DK +K+WN
Sbjct: 628 QRIASCGADKTLQVFK-AETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNS 686
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSR--LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
TG+ V + H V ++ +S LL +GS D LK+WD+ ++ + + GH + V
Sbjct: 687 VTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSV 746
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
+SPD + +AS D LKLW
Sbjct: 747 SHCRFSPDDKLLASCSADGTLKLW 770
Score = 177 (67.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 45/190 (23%), Positives = 92/190 (48%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + + H++ VLC A
Sbjct: 605 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 664
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+SAD + + + S +++ W+ TG+ + H + + + N+ + S
Sbjct: 665 FSADDRFIATCSVDKKVKIWNSVTGELVQS-YDEHSEQVNCCHFTN---NSNHLLLATGS 720
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRE 276
D ++WD++ ++C + GHT +V+ ++ D + S D T+K+W+ +
Sbjct: 721 SDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 780
Query: 277 LKGHGHWVNS 286
+ ++NS
Sbjct: 781 INVKQFFLNS 790
Score = 164 (62.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLL 418
H V H FS DGQ +AS DK+++++ TG+ + + H V ++SAD R +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIA 673
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV--ASGGKDRVLKLW 471
+ S D +K+W+ T +L Q H+++V ++ + + A+G D LKLW
Sbjct: 674 TCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLW 728
Score = 162 (62.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 61/228 (26%), Positives = 99/228 (43%)
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQ---YSSPEEM 313
GS D I+V E +L + H + V + +T+ + D + Q + S E +
Sbjct: 979 GSDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV 1038
Query: 314 K-KAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+A E + RL+S S D T+ +W + K + HQ V SPD
Sbjct: 1039 SLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGRIEKDFVC-HQDTVLSCDISPDA 1097
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+S S DK+ K+W+ + RGH G V ++S DS LL +G + +++W++
Sbjct: 1098 TKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVS 1157
Query: 433 TQKLKQD-----LPG----HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+L + G H V + +SPDG+ + S G LK W
Sbjct: 1158 NGELLHSCAPVLVEGGAATHGGWVTDLRFSPDGKMLVSAGG--YLKWW 1203
Score = 154 (59.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H + VLS SPD + +S S D T ++W + +P+ + GHK V C A+S D L
Sbjct: 1084 HQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLA 1143
Query: 167 SGSKAGELQCWDPQTGK--PSGNPL---SG---HKKWITGISWEPVHLNAPCRRFVSASK 218
+G GE++ W+ G+ S P+ G H W+T + + P + VSA
Sbjct: 1144 TGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSP-----DGKMLVSAG- 1197
Query: 219 DGDARIWDVSLRKCV 233
G + W+V K +
Sbjct: 1198 -GYLKWWNVDSGKSI 1211
Score = 152 (58.6 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 49/205 (23%), Positives = 88/205 (42%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
NR + H V + F+ DG+ + S S D+ +++W+ ++ + H+ V
Sbjct: 993 NRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV-SLQAHQETVKDFR 1051
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ + L+S S G ++ W+ TG+ + + H+ + P +F S S
Sbjct: 1052 LLKNSR-LLSWSFDGTVKVWNIITGRIEKDFVC-HQDTVLSCDISP-----DATKFSSTS 1104
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRE 276
D A+IW L + L GH V C + D + TG + I++W + G+L+
Sbjct: 1105 ADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHS 1164
Query: 277 -----LKG----HGHWVNSLALSTE 292
++G HG WV L S +
Sbjct: 1165 CAPVLVEGGAATHGGWVTDLRFSPD 1189
Score = 42 (19.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVS 167
Q +FK G WV + GK +++
Sbjct: 137 QQKLFKLNGEPGWVTIYGMAGCGKSVLA 164
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 298 (110.0 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 83/282 (29%), Positives = 134/282 (47%)
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V C A+S DG+ L++ S G + W ++G+ L+GH+ + + P
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWR-LAGHRGPVKSCCFSP----- 78
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R S+S D R+WDV+ KC+ L GH +V V + D + +G D VWE
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Query: 268 TTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG 326
G+ + L GH + S S T +L TG++D T + + G
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTG 198
Query: 327 N-------APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
N A L SGS D T+ +W+P + P ++ GH VN + FSPD +ASA
Sbjct: 199 NISCLCYSASGLLASGSWDKTICVWKPTTNNLP-LQLKGHTIWVNSLAFSPDELKLASAG 257
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
+ +++K+W+ TGK + +G + + ++ D +LL+SG+
Sbjct: 258 YSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
Score = 284 (105.0 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 72/206 (34%), Positives = 102/206 (49%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+AGH V S FSPDGR +AS S D ++RLWD+ + GH+ V +++S D K
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK 123
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L SG W+ Q+G+ + L GH I + P + + S D
Sbjct: 124 QLASGGWDKRAIVWEVQSGRRV-HLLVGHCDSIQSSDFSPTSDS-----LATGSWDSTVH 177
Query: 224 IWDVSLRKCVIC---LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
IWD+ V+ L GHT ++C+ + G++ +GS D TI VW+ T L +LKGH
Sbjct: 178 IWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGH 237
Query: 281 GHWVNSLALST-EYALRTGAFDHTGK 305
WVNSLA S E L + + T K
Sbjct: 238 TIWVNSLAFSPDELKLASAGYSRTVK 263
Score = 252 (93.8 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 73/261 (27%), Positives = 126/261 (48%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
R ++AS DG +W + + L+GH V + DG +I + S D +I++W+
Sbjct: 39 RTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVA 98
Query: 270 QGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGN 327
+ K + LKGH V +++ S + L +G +D + + L + + I+ +
Sbjct: 99 RSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSS 158
Query: 328 --AP--ERLVSGSDDFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQWVASASFD 381
+P + L +GS D T+ +W+ S + + GH ++ + +S G +AS S+D
Sbjct: 159 DFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWD 217
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
K+I +W TT +GH V +++S D L S T+KVWD T K + L
Sbjct: 218 KTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLK 277
Query: 442 GHADEVFAVDWSPDGEKVASG 462
G D A ++PDG+ + SG
Sbjct: 278 GMLDVAHACIFTPDGKLLVSG 298
Score = 235 (87.8 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 71/243 (29%), Positives = 111/243 (45%)
Query: 239 HTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-R 296
H V C + DG + T S D + VW T G+L+ L GH V S S + L
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APE--RLVSGSDDFTMFLWEPAVSKQ 351
+ + DH+ + + L+ + + +P+ +L SG D +WE ++
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR---GHVGPVYQI 408
+ GH + FSP +A+ S+D ++ +W+ V + GH G + +
Sbjct: 145 VHL-LVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCL 203
Query: 409 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
+SA S LL SGS D T+ VW T L L GH V ++ +SPD K+AS G R +
Sbjct: 204 CYSA-SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTV 262
Query: 469 KLW 471
K+W
Sbjct: 263 KVW 265
Score = 215 (80.7 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 73/283 (25%), Positives = 129/283 (45%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H E S AFSPDGR L + S D V +W + +++ GH+ V +S DG+ +
Sbjct: 26 HGEVNCS-AFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
S S ++ WD K + L GH++ + +S+ P ++ S D A +W+
Sbjct: 85 SSSSDHSIRLWDVARSKCL-HVLKGHQRSVETVSFSP-----DSKQLASGGWDKRAIVWE 138
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE---TTQGKLIRELKGHGH 282
V + V L GH ++ + + TGS D T+ +W+ +T L+GH
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTG 198
Query: 283 WVNSLALSTEYALRTGAFDHT---GKQYSS--PEEMKKAALERYNKIKGNAPE-RLVSGS 336
++ L S L +G++D T K ++ P ++K + N + + E +L S
Sbjct: 199 NISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIW-VNSLAFSPDELKLASAG 257
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
T+ +W+ K +T + G + + F+PDG+ + S +
Sbjct: 258 YSRTVKVWDCLTGKCLET-LKGMLDVAHACIFTPDGKLLVSGA 299
Score = 208 (78.3 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 44/120 (36%), Positives = 66/120 (55%)
Query: 353 KTRMTG-HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
+ R G H VN FSPDG+ + +AS D + +W +G+ + GH GPV +S
Sbjct: 18 RVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFS 77
Query: 412 ADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D RL+ S S D ++++WD+ K L GH V V +SPD +++ASGG D+ +W
Sbjct: 78 PDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW 137
Score = 188 (71.2 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
++C + GH +V +V+FSPD +QLASG D +W++ + + GH + +
Sbjct: 100 SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSD 159
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKP--SGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+S L +GS + WD + P S + L GH I+ + + L A S
Sbjct: 160 FSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLA------S 213
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLI 274
S D +W + + L GHT+ V + + D + + + T+KVW+ GK +
Sbjct: 214 GSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCL 273
Query: 275 RELKG 279
LKG
Sbjct: 274 ETLKG 278
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 293 (108.2 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 85/289 (29%), Positives = 142/289 (49%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GH+ +T + + LN + S S D IW + + +GH AVTCV +
Sbjct: 17 GHRDAVTCVDFS---LNT--KHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ +GS+D T+++W +G+ + H V S+ ++ L T + D T K +
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 308 SSPEEMKKAALERY-NKIKGN--APE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
S+ + +L ++ N ++ +P+ RL VS SDD T+ LW+ S++ H
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT-SRECVHSYCEHGGF 189
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
V +V F P G +A+A D ++K+W+ T + V ++ H V +S+ L++ S
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASS 249
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DSTLK+ D+ +L L GH V +S GE ASGG D + +W
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 280 (103.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 79/292 (27%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + + LASGS D+T+ +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + V+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQLLVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
++ + L+ H V C K+ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPE-------EMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + + ++ AA+ + GN L++
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNY---LITA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 247 (92.0 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 61/205 (29%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ L + S D TV++W + Q +F T H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WD + V H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH V + +S +++ L SGS DSTL +W ++ Q GH D V V++SP G
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 458 KVASGGKDRVLKLWM 472
+ASG +D+ +++W+
Sbjct: 75 LLASGSRDKTVRIWV 89
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 214 (80.4 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 47/151 (31%), Positives = 86/151 (56%)
Query: 327 NAPERLVSGSDDFTMFLWE-P----AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
N P+ LV+GS D T+ W+ P ++ K + H + +N + SP+ ++ A+AS+D
Sbjct: 440 NEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYD 499
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
K K+W +G+ + V +GH ++ I++ +L+++GS D T+KVW + K+ L
Sbjct: 500 KLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLE 559
Query: 442 GHADEVFAVDW-SPDGEKVASGGKDRVLKLW 471
GH + V V + + + ++ S G D ++KLW
Sbjct: 560 GHTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Score = 170 (64.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 76/310 (24%), Positives = 126/310 (40%)
Query: 104 IAGHTEAVLSVAF-SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
IAG+ + + + P+ LA + +R+ D+ + GH + + + S DG
Sbjct: 334 IAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDG 393
Query: 163 KHLVSGSKAGELQCW----DPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K + + SK E + W + Q +P GH IT IS N P + V+ S
Sbjct: 394 KWIATASKDNEARLWRWNGELQDFEPFAR-FQGHAGAITAISLSKSQ-NEP-KFLVTGST 450
Query: 219 DGDARIWDV-SLRKCVICLS-----GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQG 271
D + W + + ++ S H + + D T S D KVW+T G
Sbjct: 451 DLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSG 510
Query: 272 KLIRELKGH--GHW-VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN----KI 324
+ I LKGH G W +N + + TG+ D T K +S + K LE + ++
Sbjct: 511 ETIGVLKGHKRGLWDINFYKF--DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 325 K---GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
K P+ L G+D LW+ + K+ + H Q + + DG++ +A D
Sbjct: 569 KFFNREHPQLLSCGADGLIK-LWDYKQGEIIKS-LDNHDQRIWAMDLKNDGEYFTTADAD 626
Query: 382 KSIKLWNGTT 391
+ W T
Sbjct: 627 GKLSFWTDNT 636
Score = 165 (63.1 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTGKF--VAVFRGHVGPVYQISWSA- 412
GH ++N V S DG+W+A+AS D +LW NG F A F+GH G + IS S
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKS 438
Query: 413 --DSRLLLSGSKDSTLKVWDIRTQ-----KLKQ-DLPGHADEVFAVDWSPDGEKVASGGK 464
+ + L++GS D T+K W I K + H ++ ++D SP+ E A+
Sbjct: 439 QNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASY 498
Query: 465 DRVLKLW 471
D++ K+W
Sbjct: 499 DKLGKVW 505
Score = 155 (59.6 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I G E + ++ +PDG LA S +R++DLN + + K + V + +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGS-VIKNFKLPSPVYISSVDSTSS 114
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
G G + WD + G + + L GH I +++ LN+ R S G +
Sbjct: 115 LFAFGGSDGVITVWDIENGYVT-HSLKGHGTTICSLTFHG-ELNSQDWRLASGDTMGTVK 172
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
IWD+ R+C+ L H AV V + DG ++ +G +D + ++ T K I
Sbjct: 173 IWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTI 224
Score = 137 (53.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 56/218 (25%), Positives = 90/218 (41%)
Query: 238 GHTLAVTCVKWGGDG----VIYTGSQDCTIKVWE--TTQGKLIREL----KGHGHWVNSL 287
GH A+T + + TGS D TIK W+ T +++ + H +NS+
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 288 ALST--EYALRTGAFDHTGK--QYSSPEEM-----KKAALERYNKIKGNAPERLVSGSDD 338
+S EY T ++D GK Q S E + K L N K + + +V+GS D
Sbjct: 485 DVSPNDEY-FATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD--KLIVTGSGD 541
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
T+ +W KT + GH V V +F+ + + S D IKLW+ G+ +
Sbjct: 542 KTIKVWSLLDFSCKKT-LEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
H ++ + D + D L W T++
Sbjct: 601 LDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEE 638
Score = 93 (37.8 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 39/192 (20%), Positives = 76/192 (39%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
G T A +S + +G L + + V + +L+T ++K G + + + DG +L
Sbjct: 19 GGTSASISTS---NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S++ L+ +D G N +I+ + ++ F DG +W
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV-------DSTSSLFAFGGSDGVITVW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGG-----DGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
D+ L GH + + + G D + +G T+K+W+ + + I LK H
Sbjct: 129 DIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDH 188
Query: 281 GHWVNSLALSTE 292
V + +
Sbjct: 189 NTAVRGVGFDQD 200
Score = 89 (36.4 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 355 RMTGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD 413
R+ G+Q ++ + Y P+ +A A+ ++++ + + V+ GH + + S D
Sbjct: 333 RIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTD 392
Query: 414 SRLLLSGSKDSTLKVWDIRTQKLKQDL-P-----GHADEVFAVDWSPDGEK---VASGGK 464
+ + + SKD+ ++W R QD P GHA + A+ S + + +G
Sbjct: 393 GKWIATASKDNEARLW--RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGST 450
Query: 465 DRVLKLW 471
D +K W
Sbjct: 451 DLTIKKW 457
Score = 80 (33.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL-NTQT-PMFKCTGHKNWVLCI 156
RC T+ H AV V F DG SG D V +++ N +T F +
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFV 239
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSG-NPL 189
+ D ++ +G L+ WD ++G+ G +P+
Sbjct: 240 SLIDDRQYFYTGGSENVLKIWDIKSGEMIGRSPI 273
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 214 (80.4 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 47/151 (31%), Positives = 86/151 (56%)
Query: 327 NAPERLVSGSDDFTMFLWE-P----AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
N P+ LV+GS D T+ W+ P ++ K + H + +N + SP+ ++ A+AS+D
Sbjct: 440 NEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYD 499
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
K K+W +G+ + V +GH ++ I++ +L+++GS D T+KVW + K+ L
Sbjct: 500 KLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLE 559
Query: 442 GHADEVFAVDW-SPDGEKVASGGKDRVLKLW 471
GH + V V + + + ++ S G D ++KLW
Sbjct: 560 GHTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Score = 170 (64.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 76/310 (24%), Positives = 126/310 (40%)
Query: 104 IAGHTEAVLSVAF-SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
IAG+ + + + P+ LA + +R+ D+ + GH + + + S DG
Sbjct: 334 IAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDG 393
Query: 163 KHLVSGSKAGELQCW----DPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K + + SK E + W + Q +P GH IT IS N P + V+ S
Sbjct: 394 KWIATASKDNEARLWRWNGELQDFEPFAR-FQGHAGAITAISLSKSQ-NEP-KFLVTGST 450
Query: 219 DGDARIWDV-SLRKCVICLS-----GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQG 271
D + W + + ++ S H + + D T S D KVW+T G
Sbjct: 451 DLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSG 510
Query: 272 KLIRELKGH--GHW-VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN----KI 324
+ I LKGH G W +N + + TG+ D T K +S + K LE + ++
Sbjct: 511 ETIGVLKGHKRGLWDINFYKF--DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 325 K---GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
K P+ L G+D LW+ + K+ + H Q + + DG++ +A D
Sbjct: 569 KFFNREHPQLLSCGADGLIK-LWDYKQGEIIKS-LDNHDQRIWAMDLKNDGEYFTTADAD 626
Query: 382 KSIKLWNGTT 391
+ W T
Sbjct: 627 GKLSFWTDNT 636
Score = 165 (63.1 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTGKF--VAVFRGHVGPVYQISWSA- 412
GH ++N V S DG+W+A+AS D +LW NG F A F+GH G + IS S
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKS 438
Query: 413 --DSRLLLSGSKDSTLKVWDIRTQ-----KLKQ-DLPGHADEVFAVDWSPDGEKVASGGK 464
+ + L++GS D T+K W I K + H ++ ++D SP+ E A+
Sbjct: 439 QNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASY 498
Query: 465 DRVLKLW 471
D++ K+W
Sbjct: 499 DKLGKVW 505
Score = 155 (59.6 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I G E + ++ +PDG LA S +R++DLN + + K + V + +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGS-VIKNFKLPSPVYISSVDSTSS 114
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
G G + WD + G + + L GH I +++ LN+ R S G +
Sbjct: 115 LFAFGGSDGVITVWDIENGYVT-HSLKGHGTTICSLTFHG-ELNSQDWRLASGDTMGTVK 172
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
IWD+ R+C+ L H AV V + DG ++ +G +D + ++ T K I
Sbjct: 173 IWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTI 224
Score = 137 (53.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 56/218 (25%), Positives = 90/218 (41%)
Query: 238 GHTLAVTCVKWGGDG----VIYTGSQDCTIKVWE--TTQGKLIREL----KGHGHWVNSL 287
GH A+T + + TGS D TIK W+ T +++ + H +NS+
Sbjct: 425 GHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 288 ALST--EYALRTGAFDHTGK--QYSSPEEM-----KKAALERYNKIKGNAPERLVSGSDD 338
+S EY T ++D GK Q S E + K L N K + + +V+GS D
Sbjct: 485 DVSPNDEY-FATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD--KLIVTGSGD 541
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
T+ +W KT + GH V V +F+ + + S D IKLW+ G+ +
Sbjct: 542 KTIKVWSLLDFSCKKT-LEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
H ++ + D + D L W T++
Sbjct: 601 LDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEE 638
Score = 93 (37.8 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 39/192 (20%), Positives = 76/192 (39%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
G T A +S + +G L + + V + +L+T ++K G + + + DG +L
Sbjct: 19 GGTSASISTS---NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S++ L+ +D G N +I+ + ++ F DG +W
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV-------DSTSSLFAFGGSDGVITVW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGG-----DGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
D+ L GH + + + G D + +G T+K+W+ + + I LK H
Sbjct: 129 DIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDH 188
Query: 281 GHWVNSLALSTE 292
V + +
Sbjct: 189 NTAVRGVGFDQD 200
Score = 89 (36.4 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 355 RMTGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD 413
R+ G+Q ++ + Y P+ +A A+ ++++ + + V+ GH + + S D
Sbjct: 333 RIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTD 392
Query: 414 SRLLLSGSKDSTLKVWDIRTQKLKQDL-P-----GHADEVFAVDWSPDGEK---VASGGK 464
+ + + SKD+ ++W R QD P GHA + A+ S + + +G
Sbjct: 393 GKWIATASKDNEARLW--RWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGST 450
Query: 465 DRVLKLW 471
D +K W
Sbjct: 451 DLTIKKW 457
Score = 80 (33.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL-NTQT-PMFKCTGHKNWVLCI 156
RC T+ H AV V F DG SG D V +++ N +T F +
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFV 239
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSG-NPL 189
+ D ++ +G L+ WD ++G+ G +P+
Sbjct: 240 SLIDDRQYFYTGGSENVLKIWDIKSGEMIGRSPI 273
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 232 (86.7 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 46/113 (40%), Positives = 70/113 (61%)
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLL 418
H + VN + S DG+ +ASAS DK+IKLW+ +TG+ V V RGH V+ S++ SR L
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLA 523
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
SGS D T+++W++ TQ+ Q L GH + + + G +V S D ++K+W
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVW 576
Score = 211 (79.3 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 73/270 (27%), Positives = 124/270 (45%)
Query: 97 VNRCSATIAGHTEAVLSVAFSP---DGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKN 151
V +C GHT +V +VA P +G LAS S D T++ ++L +Q +
Sbjct: 399 VYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAV 458
Query: 152 WVL--------CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
W + I S DG+ + S S+ ++ WD TG+ G L GH++ + S+ P
Sbjct: 459 WTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVG-VLRGHRRGVWACSFNP 517
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCT 262
R+ S S D RIW+V ++CV L GHT A+ + + G + + + D
Sbjct: 518 FS-----RQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGL 572
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYS--SPEEMKKAALE 319
+KVW + G+ + L H V +LA + +L +G D + + E + K A E
Sbjct: 573 VKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEE 632
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVS 349
+++ E+L+S + W+ A++
Sbjct: 633 LERRVEA---EQLLSNFEQTED--WQQAIA 657
Score = 197 (74.4 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 322 NKIKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
N I+ + R++ S S D T+ LW+ + + + GH++ V F+P + +AS S
Sbjct: 469 NAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGV-LRGHRRGVWACSFNPFSRQLASGSG 527
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
D++I++WN T + V GH G + ++ + + ++S + D +KVW + + + L
Sbjct: 528 DRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATL 587
Query: 441 PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H D V+A+ DG + SGG D V+ +W
Sbjct: 588 DNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 179 (68.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 62/219 (28%), Positives = 104/219 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGHKNWVLCIAWS 159
+ GHT+ VL++ S DG LA+G+ D TVRLW+LN + ++KC TGH V +A
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALG 419
Query: 160 ---ADG--KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH---LNAPCR 211
+G L S S+ L+ ++ + + + + S W V+ ++ R
Sbjct: 420 PLDVNGYPTFLASSSQDRTLKRFNLGS-QLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGR 478
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQ 270
SAS+D ++WD S + V L GH V + + +GS D TI++W
Sbjct: 479 IIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDT 538
Query: 271 GKLIRELKGH-GHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ ++ L+GH G + + +S + + A D K +S
Sbjct: 539 QQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWS 577
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 66/340 (19%), Positives = 143/340 (42%)
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
++V +A ++D K L++ ++ L ++ +G+ + + H+ + ++ +P +
Sbjct: 62 DYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKS-MKAHETPVITMTIDPTNT---- 116
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGH--TLAVTCV-KWGGDGVIYTGSQDCTIKVWE 267
+ +G ++WD++ GH ++ C K V+ +G+ D +++W+
Sbjct: 117 -LLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWD 175
Query: 268 TTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIK- 325
+ + +GH + L T L +G+ D T + ++ + + ++ ++
Sbjct: 176 LNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEA 235
Query: 326 -----GNAPERLVSGSDDFTMFL---WEPAVSKQPKTRMTGHQQ---LVNHVYFSPDGQW 374
G E+++ + + + L W+ P T H + ++ V FS +
Sbjct: 236 IGWVNGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTT-HSETNAIIQVVPFSENT-- 292
Query: 375 VASASFDKSIKLWNGTTGK-FVAV--FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
+ S D S+ L G+ F+ + G V +W D L + + + +
Sbjct: 293 LLSVHSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTD 352
Query: 432 RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
TQ L GH D V +D S DG +A+G KD ++LW
Sbjct: 353 GTQVFGV-LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLW 391
Score = 160 (61.4 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 332 LVSGSDDFTMFLW----EPAVSKQPKTRMTGHQQLVNHVYFSP---DGQ--WVASASFDK 382
L +G+ D T+ LW E V K TGH V V P +G ++AS+S D+
Sbjct: 379 LATGAKDNTVRLWNLNIEDNVYKCIHV-FTGHTASVTAVALGPLDVNGYPTFLASSSQDR 437
Query: 383 SIKLWN-GT-------TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ 434
++K +N G+ + + V + H V I S D R++ S S+D T+K+WD T
Sbjct: 438 TLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTG 497
Query: 435 KLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
++ L GH V+A ++P ++ASG DR +++W
Sbjct: 498 EVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIW 534
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 78/383 (20%), Positives = 155/383 (40%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
V ++A + D ++L + + ++++ + + H+ V+ + L +G
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ WD G + GH I+ + + H N S + D R+WD++
Sbjct: 124 EGLVKVWDI-AGAYVTHSFRGHGGVISALCFGK-HQNTWV--LASGADDSRVRLWDLNSS 179
Query: 231 KCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG-HG----HWV 284
+ + GH+ + + + G + +GS+D T++VW + +R + H WV
Sbjct: 180 RSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWV 239
Query: 285 NSLALSTE-YALRTG----AFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDD 338
N Y G A+D +G + + + ++ + L+S D
Sbjct: 240 NGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSD 299
Query: 339 FTMFLWE--PAVSKQPKTRMTGH-QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
++ L + P ++ G ++++ + D V S + + +GT +
Sbjct: 300 LSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGT--QVF 357
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ----KLKQDLPGHADEVFAVD 451
V GH V + S D L +G+KD+T+++W++ + K GH V AV
Sbjct: 358 GVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVA 417
Query: 452 WSP---DGEK--VASGGKDRVLK 469
P +G +AS +DR LK
Sbjct: 418 LGPLDVNGYPTFLASSSQDRTLK 440
Score = 138 (53.6 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALERYNK----IKGNAPER 331
+K H VN++ +S + + A D T K + S L + + N R
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSR 520
Query: 332 -LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
L SGS D T+ +W + +T + GH + + + G V SA+ D +K+W+ +
Sbjct: 521 QLASGSGDRTIRIWNVDTQQCVQT-LEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLS 579
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
+G+ VA H V+ ++ D LL+SG D+ + VW T++
Sbjct: 580 SGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEE 624
Score = 135 (52.6 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 43/190 (22%), Positives = 80/190 (42%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ I P R ++ H V+++ P LA+G + V++WD+ GH
Sbjct: 87 IYEI-PSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHG 145
Query: 151 NWVLCIAWSADGKH-----LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
+ + + GKH L SG+ ++ WD + + S GH I G+++EP
Sbjct: 146 GVISALCF---GKHQNTWVLASGADDSRVRLWDLNSSR-SMAVFEGHSSVIRGLTFEPTG 201
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW-GG---DGVIYTGSQDC 261
+S S+D ++W++ R V + +V + W G + ++YT +
Sbjct: 202 -----SFLLSGSRDKTVQVWNIKKRSAVRTIPVFH-SVEAIGWVNGQPEEKILYTAGEGN 255
Query: 262 TIKVWETTQG 271
I W+ G
Sbjct: 256 LILAWDWKSG 265
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 51/223 (22%), Positives = 101/223 (45%)
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS--LRK------CVICLSGHTL 241
+GH +T ++ P+ +N S+S+D + +++ L K V + H
Sbjct: 407 TGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDR 466
Query: 242 AVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTEYALRTG 298
V ++ DG +I + SQD TIK+W+++ G+++ L+GH G W S + L +G
Sbjct: 467 DVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQ-LASG 525
Query: 299 AFDHTGKQYSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWEPAVSKQPK 353
+ D T + ++ + LE + I + ++VS + D + +W + +
Sbjct: 526 SGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVA 585
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
T + H+ V + DG + S D + +W T +++A
Sbjct: 586 T-LDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIA 627
Score = 106 (42.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 30/98 (30%), Positives = 47/98 (47%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQISWS 411
+ GH +V + S DG W+A+ + D +++LWN K + VF GH V ++
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALG 419
Query: 412 A-DSR----LLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
D L S S+D TLK +++ +Q K D A
Sbjct: 420 PLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRA 457
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 292 (107.8 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 82/299 (27%), Positives = 142/299 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
++GH AV ++ F+P G +ASGS D + LW ++ F GHKN +L + W++DG
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS S ++ WD +TGK ++ H ++ P P +S S DG A
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQI-KKMAEHSSFVNSCC--PTRRGPPL--IISGSDDGTA 163
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD+ R + +T V + I+TG D +KVW+ +G+ L+GH
Sbjct: 164 KLWDMRQRGAIQTFPDK-YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQ 222
Query: 282 HWVNSLALSTEYA-LRTGAFDHT----GKQYSSPEEMKKAALERY------NKIKGN-AP 329
+ ++LS + + L T D+ + +P+ E + N +K + +P
Sbjct: 223 DTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSP 282
Query: 330 E--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ ++ +GS D + +W+ S++ ++ GH VN F P + S S DK+I L
Sbjct: 283 DGTKVTAGSSDRMVHIWD-TTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 233 (87.1 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 72/301 (23%), Positives = 134/301 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR-KCVICLSGHTLAVTCVK 247
LSGH + + + P S S D + +W V K + L GH A+ +
Sbjct: 49 LSGHPSAVYTMKFNPAGT-----LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLH 103
Query: 248 WGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHTG 304
W DG I + S D T++ W+ GK I+++ H +VNS + + +G+ D T
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTA 163
Query: 305 KQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
K + + ++ A++ + +K + +A +++ +G D + +W+ + T +
Sbjct: 164 KLW---DMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT-LE 219
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGP----VYQIS 409
GHQ + + SPDG ++ + D + +W+ + V +F GH + + S
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 279
Query: 410 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 469
WS D + +GS D + +WD +++ LPGH V + P + S D+ +
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIY 339
Query: 470 L 470
L
Sbjct: 340 L 340
Score = 231 (86.4 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 77/263 (29%), Positives = 112/263 (42%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG-KLIRELKGHG---- 281
SL ++ LSGH AV +K+ G +I +GS D I +W K LKGH
Sbjct: 41 SLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAIL 100
Query: 282 --HWVN--SLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
HW + S +S A+D TGKQ E +G P ++SGS
Sbjct: 101 DLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRG--PPLIISGS 158
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
DD T LW+ +T +Q + V FS + + D +K+W+ G+
Sbjct: 159 DDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM 216
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPGHADE----VF 448
GH + +S S D LL+ D+ L VWD+R + + GH +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
WSPDG KV +G DR++ +W
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIW 299
Score = 191 (72.3 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 74/308 (24%), Positives = 133/308 (43%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ P+ +GH + V + ++ G + SGS E+ W + L GHK I +
Sbjct: 43 EAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDL 102
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT--CVKWGGDGVIYTG 257
W + + VSAS D R WDV K + ++ H+ V C G +I +G
Sbjct: 103 HW-----TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISG 157
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKA 316
S D T K+W+ Q I+ + + +++ S + TG D+ K + +
Sbjct: 158 SDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM 216
Query: 317 ALERY-NKIKGNA--PER---LVSGSDDFTMFLWE--PAVSKQPKTRM-TGHQQLVNH-- 365
LE + + I G + P+ L +G D+ + +W+ P + ++ GHQ
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDN-KLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL 275
Query: 366 --VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
+SPDG V + S D+ + +W+ T+ + + GH G V + + ++ S S D
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSD 335
Query: 424 STLKVWDI 431
+ + +I
Sbjct: 336 KNIYLGEI 343
Score = 127 (49.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GH-----KNWV 153
T+ GH + + ++ SPDG L + D + +WD+ P +C GH KN +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH 192
C +WS DG + +GS + WD T + + L GH
Sbjct: 277 KC-SWSPDGTKVTAGSSDRMVHIWDT-TSRRTIYKLPGH 313
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 193 (73.0 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 43/115 (37%), Positives = 67/115 (58%)
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
T H+ V H+ F+ DG+ V S+S D +I++WN + + V++ + H V +SRL
Sbjct: 745 TRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSL-QAHQETVKDFRLLKNSRL 803
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L S S D T+KVW+I T ++++D H D V + D SPD K +S D+ K+W
Sbjct: 804 L-SWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 857
Score = 190 (71.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 45/144 (31%), Positives = 77/144 (53%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+R+ S D T+ +++ A + + + H+ V FS D +++A+ S DK +K+WN
Sbjct: 364 QRIASCGADKTLQVFK-AETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNS 422
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSR--LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
TG+ V + H V ++ +S LL +GS D LK+WD+ ++ + + GH + V
Sbjct: 423 VTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSV 482
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
+SPD + +AS D LKLW
Sbjct: 483 SHCRFSPDDKLLASCSADGTLKLW 506
Score = 177 (67.4 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 45/190 (23%), Positives = 92/190 (48%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + + H++ VLC A
Sbjct: 341 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 400
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+SAD + + + S +++ W+ TG+ + H + + + N+ + S
Sbjct: 401 FSADDRFIATCSVDKKVKIWNSVTGELVQS-YDEHSEQVNCCHFTN---NSNHLLLATGS 456
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRE 276
D ++WD++ ++C + GHT +V+ ++ D + S D T+K+W+ +
Sbjct: 457 SDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 516
Query: 277 LKGHGHWVNS 286
+ ++NS
Sbjct: 517 INVKQFFLNS 526
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLL 418
H V H FS DGQ +AS DK+++++ TG+ + + H V ++SAD R +
Sbjct: 350 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIA 409
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV--ASGGKDRVLKLW 471
+ S D +K+W+ T +L Q H+++V ++ + + A+G D LKLW
Sbjct: 410 TCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLW 464
Score = 154 (59.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H + VLS SPD + +S S D T ++W + +P+ + GHK V C A+S D L
Sbjct: 829 HQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLA 888
Query: 167 SGSKAGELQCWDPQTGK--PSGNPL---SG---HKKWITGISWEPVHLNAPCRRFVSASK 218
+G GE++ W+ G+ S P+ G H W+T + + P + VSA
Sbjct: 889 TGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSP-----DGKMLVSAG- 942
Query: 219 DGDARIWDVSLRKCV 233
G + W+V K +
Sbjct: 943 -GYLKWWNVDSGKSI 956
Score = 152 (58.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 49/205 (23%), Positives = 88/205 (42%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
NR + H V + F+ DG+ + S S D+ +++W+ ++ + H+ V
Sbjct: 738 NRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV-SLQAHQETVKDFR 796
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ + L+S S G ++ W+ TG+ + + H+ + P +F S S
Sbjct: 797 LLKNSR-LLSWSFDGTVKVWNIITGRIEKDFVC-HQDTVLSCDISP-----DATKFSSTS 849
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRE 276
D A+IW L + L GH V C + D + TG + I++W + G+L+
Sbjct: 850 ADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHS 909
Query: 277 -----LKG----HGHWVNSLALSTE 292
++G HG WV L S +
Sbjct: 910 CAPVLVEGGAATHGGWVTDLRFSPD 934
Score = 138 (53.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ ++S SDD + +W + + HQ+ V + + + S SFD ++K+WN
Sbjct: 761 KNVISSSDDSAIQVWN--WQSEETVSLQAHQETVKDFRLLKNSR-LLSWSFDGTVKVWNI 817
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
TG+ F H V S D+ S S D T K+W +L GH V
Sbjct: 818 ITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRC 877
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
+S D +A+G + +++W
Sbjct: 878 SAFSVDSTLLATGDDNGEIRIW 899
Score = 132 (51.5 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 50/193 (25%), Positives = 79/193 (40%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I H + VL AFS D R +A+ S D V++W+ T + H V C ++ +
Sbjct: 389 IKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSN 448
Query: 164 HLV--SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
HL+ +GS L+ WD K N + GH ++ + P + S S DG
Sbjct: 449 HLLLATGSSDYFLKLWDLNQ-KECRNTMFGHTNSVSHCRFSPDD-----KLLASCSADGT 502
Query: 222 ARIWDVSL---RKCV----ICLSGHT------LAVTCVKWGGDGVIYTGSQDCTIKVWET 268
++WDV RK + L+ + V C W DG + + ++
Sbjct: 503 LKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNI 562
Query: 269 TQGKLIRELK-GH 280
G L+ E+ GH
Sbjct: 563 HTGGLLAEIHTGH 575
Score = 124 (48.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/160 (28%), Positives = 65/160 (40%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-------QTPMFKCTGHKN- 151
C T+ GHT +V FSPD + LAS S D T++LWD+ + F ++
Sbjct: 471 CRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQ 530
Query: 152 -----WVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-H 205
V C +WSADG LV +K ++ ++ TG +GH I + P H
Sbjct: 531 EDMEVMVKCCSWSADGASLVVAAK-NKVLLFNIHTGGLLAEIHTGHHSTIQYCDFSPSNH 589
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTC 245
L K G IW + + S H V C
Sbjct: 590 LAVVALSQYCVEKRGKF-IWLPGSLERKLDYSKHFFTVLC 628
Score = 88 (36.0 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 39/179 (21%), Positives = 75/179 (41%)
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H + V +S DG+ + S LQ + +TG+ + H+ + ++ +A
Sbjct: 350 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLE-IKAHEDEVLCCAF-----SA 403
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG---VIYTGSQDCTIKV 265
R + S D +IW+ + V H+ V C + + ++ TGS D +K+
Sbjct: 404 DDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKL 463
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTEYALRTG-AFDHTGKQYS--SPEEMKKAALERY 321
W+ Q + + GH + V+ S + L + D T K + S E K ++++
Sbjct: 464 WDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQF 522
Score = 72 (30.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 28/143 (19%), Positives = 60/143 (41%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E V+ ++F + + A ++ K +M Q + +V + S+K+
Sbjct: 676 ELKVATGEEFCLQIKRAASPQKRKKKMIPDQSFMVSCIQGTSECFVLGDVYGHSLKVLEL 735
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
+ H V I ++ D + ++S S DS ++VW+ ++++ L H + V
Sbjct: 736 LNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVS-LQAHQETV-- 792
Query: 450 VDWSP-DGEKVASGGKDRVLKLW 471
D+ ++ S D +K+W
Sbjct: 793 KDFRLLKNSRLLSWSFDGTVKVW 815
Score = 41 (19.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTGKFVA-VFRGHVGPVYQISWSADSRL 416
+S DG + A+ +K + L+N TG +A + GH + +S + L
Sbjct: 542 WSADGASLVVAAKNK-VLLFNIHTGGLLAEIHTGHHSTIQYCDFSPSNHL 590
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 288 (106.4 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 74/271 (27%), Positives = 136/271 (50%)
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT--GSQDCTIKVWETTQG- 271
SAS D +W + + GH+ ++ + W D YT S DCT+++W+
Sbjct: 60 SASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH-YTCSASDDCTLRIWDARSPY 118
Query: 272 KLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE----EMKKAALERYNKIKG 326
+ ++ L+GH ++V + + L +G+FD T + + M KA + +
Sbjct: 119 ECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHF 178
Query: 327 NAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
N L VS S D + +W+ KT + V+ FSP+G+++ A+ D ++K
Sbjct: 179 NRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLK 238
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWS---ADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 442
L N TGKF+ V+ GH V+ I+ + + + ++SGS+D+ + +WD++ + + Q L G
Sbjct: 239 LSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEG 298
Query: 443 HADEVFAVDWSPDGEKVASGGK--DRVLKLW 471
H D V +V P +++S G D+ +++W
Sbjct: 299 HTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 288 (106.4 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 83/299 (27%), Positives = 139/299 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT A+ V FS DG LAS S D T+ LW + + + GH + + +AWS+D
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ S S L+ WD ++ L GH ++ +++ P P VS S D
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP-----PSNLIVSGSFDETI 152
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
RIW+V KCV + H++ ++ V + DG +I + S D + K+W+ +G ++ L
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDK 212
Query: 282 HWVNSLALSTEYA--LRTGAFDHTGK--QYSSPEEMKKAALERYNKI-------KGNAPE 330
S A + + D T K Y++ + +K NK+ +
Sbjct: 213 SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLK-VYTGHTNKVFCITSAFSVTNGK 271
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS--FDKSIKLW 387
+VSGS+D ++LW+ ++ R+ GH V V P ++S+ DK+I++W
Sbjct: 272 YIVSGSEDNCVYLWD-LQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 218 (81.8 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 43/120 (35%), Positives = 69/120 (57%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
KT + GH ++ V FS DG +ASAS DK++ LW+ T + + GH + ++WS+
Sbjct: 37 KT-LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 413 DSRLLLSGSKDSTLKVWDIRTQ-KLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DS S S D TL++WD R+ + + L GH + VF V+++P + SG D +++W
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Score = 203 (76.5 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 42/141 (29%), Positives = 78/141 (55%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S S D TM LW A + R GH ++ + +S D + SAS D ++++W+ +
Sbjct: 58 LASASVDKTMILWS-ATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS 116
Query: 392 G-KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+ + V RGH V+ ++++ S L++SGS D T+++W+++T K + + H+ + +V
Sbjct: 117 PYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSV 176
Query: 451 DWSPDGEKVASGGKDRVLKLW 471
++ DG + S D K+W
Sbjct: 177 HFNRDGSLIVSASHDGSCKIW 197
Score = 172 (65.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 49/203 (24%), Positives = 92/203 (45%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ R C + GHT V V F+P + SGS D T+R+W++ T + H
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
+ + ++ DG +VS S G + WD + G + ++ + P N
Sbjct: 171 MPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSP---NG-- 225
Query: 211 RRFVS-ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG---GDG-VIYTGSQDCTIKV 265
+F+ A+ D ++ + + K + +GHT V C+ +G I +GS+D + +
Sbjct: 226 -KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYL 284
Query: 266 WETTQGKLIRELKGHGHWVNSLA 288
W+ +++ L+GH V S++
Sbjct: 285 WDLQARNILQRLEGHTDAVISVS 307
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 294 (108.6 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 87/302 (28%), Positives = 146/302 (48%)
Query: 179 PQTGKPS-GNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS 237
P PS GH+ +T + + LN + S S D IW + + +
Sbjct: 4 PSQEDPSLERHFKGHRDAVTCVDFS---LNT--KHLASGSMDSTLMIWHMKPQSRAYRFT 58
Query: 238 GHTLAVTCVKWGGDG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YA 294
GH AVTCV + G ++ +GS+D T+++W +G+ + H V S+ ++ +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQS 117
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGN--APE-RL-VSGSDDFTMFLWEPAVS 349
L T + D T K +S+ + +L ++ N ++ +P+ RL VS SDD T+ LW+ S
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT-S 176
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
++ H V +V F P G +A+A D ++K+W+ T + + ++ H V +S
Sbjct: 177 RECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALS 236
Query: 410 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 469
+ L++ S DSTLK+ D+ +L L GH V +S GE ASGG D +
Sbjct: 237 FHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 470 LW 471
+W
Sbjct: 297 VW 298
Score = 282 (104.3 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 80/292 (27%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + + LASGS D+T+ +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + V+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQSLVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
++ + L+ H V C K+ DG +I + S D T+K+W+ T + I HG +V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPE-------EMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + + ++ AA+ + GN L++
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNY---LITA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 251 (93.4 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 69/241 (28%), Positives = 112/241 (46%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ L + S D TV++W + Q +F T H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECIHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WD + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMK--KAALE--RYNKIKGNAPERLVSG 335
H ++A S RTG + +G S E++ K+ + Y +K P L S
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG---GSDEQVMVWKSNFDIVDYGDMKARRPPPLTSS 321
Query: 336 S 336
S
Sbjct: 322 S 322
Score = 154 (59.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH V + +S +++ L SGS DSTL +W ++ Q GH D V V++SP G
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 458 KVASGGKDRVLKLWM 472
+ASG +D+ +++W+
Sbjct: 75 LLASGSRDKTVRIWV 89
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 240 (89.5 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 139
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 140 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 193
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 194 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 253
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 254 TIKMWDVSTGMCLMTLVGHDNWVRGV 279
Score = 227 (85.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 119 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 178
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 179 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 237
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 238 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 297
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 298 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 340
Score = 204 (76.9 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 42/125 (33%), Positives = 68/125 (54%)
Query: 348 VSKQP-KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
+ + P K ++GH+ V V F P + SAS D +IK+W+ TG F +GH V
Sbjct: 30 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ 89
Query: 407 QISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 466
IS+ +LL S S D T+K+WD + + + + GH V +V P+G+ + S +D+
Sbjct: 90 DISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDK 149
Query: 467 VLKLW 471
+K+W
Sbjct: 150 TIKMW 154
Score = 195 (73.7 bits), Expect = 8.9e-25, Sum P(2) = 8.9e-25
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 99 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 152
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 153 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 212
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 213 VVECISWAPE 222
Score = 195 (73.7 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 74 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 123
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 124 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 183
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 184 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 222
Score = 185 (70.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 58 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 116
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 117 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 176
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 177 PNQDGTLIASCSNDQTVRVWV 197
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 29 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 81
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 82 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 141
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 142 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 200
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 201 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 246
Score = 154 (59.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 143 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 192
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 193 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 243
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 244 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 153 (58.9 bits), Expect = 8.9e-25, Sum P(2) = 8.9e-25
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 219 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 274
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 275 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 334
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 335 VDQTVKVW 342
Score = 151 (58.2 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 94
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 95 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 149
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 150 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 209
Query: 321 YNKI 324
+ +
Sbjct: 210 HEHV 213
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 294 (108.6 bits), Expect = 9.2e-25, P = 9.2e-25
Identities = 84/292 (28%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV SV FS + +QLASGS D+ + +W + QT ++ GHK+ V C+ +S G L
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + FV+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQSFVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C K+ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + ++ AA+ + GN LV+
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY---LVTA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 287 (106.1 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 82/289 (28%), Positives = 143/289 (49%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GH+ +T + + LN ++ S S D +W + + +GH AVTCV +
Sbjct: 17 GHRDAVTSVDFS---LNT--KQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP 71
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ +GS+D T+++W +G+ + H V S+ ++ + T + D T K +
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 308 SSPEEMKKAALERY-NKIKGN--APE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
S+ + +L ++ N ++ +P+ RL VS SDD T+ LW+ S++ H
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT-SRECVHSYCEHGGF 189
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
V +V F P G +A+A D ++K+W+ T + + ++ H V +S+ L++ S
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 249
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DSTLK+ D+ +L L GH V +S GE ASGG D + +W
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 242 (90.2 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 59/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D TV++W + Q +F + H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 235 (87.8 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 71/218 (32%), Positives = 102/218 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ ++P R + AGH +AV V FSP G LASGS D TVR+W N + H
Sbjct: 45 VWHMKPQTR-AYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT 103
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + + +DG+ V+ S ++ W K + LS H W+ + P
Sbjct: 104 ATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFS-LSQHINWVRCAKFSP-----DG 157
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VSAS D ++WD + R+CV H VT V + G I D T+KVW+
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 270 QGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VN+L+ S Y L T + D T K
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNY-LVTASSDSTLK 254
Score = 152 (58.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH V + +S +++ L SGS DS L VW ++ Q GH D V V++SP G
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGH 74
Query: 458 KVASGGKDRVLKLWM 472
+ASG +D+ +++W+
Sbjct: 75 LLASGSRDKTVRIWV 89
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 285 (105.4 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 83/292 (28%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + +QLASGS D+ + +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + FV+AS D ++W
Sbjct: 108 ASGSRDKTVRIWVPNI-KGESTVFRAHTATVRS-----VHFCSDGQSFVTASDDKTIKVW 161
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C K+ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 221
Query: 285 NSLALSTE-YALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + ++ AA+ + GN LV+
Sbjct: 222 TYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY---LVTA 278
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 279 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 281 (104.0 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 84/301 (27%), Positives = 144/301 (47%)
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSG 238
PQ GH+ +T + + N ++ S S D +W + + +G
Sbjct: 36 PQEDPSLERHFKGHRDAVTCVDFS---FNM--KQLASGSMDSCLMVWHMKPQSRAYRFTG 90
Query: 239 HTLAVTCVKWGGDG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YAL 295
H AVTCV + G ++ +GS+D T+++W +G+ + H V S+ ++ +
Sbjct: 91 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGEST-VFRAHTATVRSVHFCSDGQSF 149
Query: 296 RTGAFDHTGKQYSSPEEMKKAALERY-NKIKGN--APE-RL-VSGSDDFTMFLWEPAVSK 350
T + D T K +S+ + +L ++ N ++ +P+ RL VS SDD T+ LW+ S+
Sbjct: 150 VTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT-SR 208
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW 410
+ H V +V F P G VA+A D ++K+W+ T + + ++ H V +S+
Sbjct: 209 ECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 268
Query: 411 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 470
L++ S DSTLK+ D+ +L L GH V +S GE ASGG D + +
Sbjct: 269 HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 328
Query: 471 W 471
W
Sbjct: 329 W 329
Score = 240 (89.5 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D T+++W + Q +F + H NWV C +S
Sbjct: 127 STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSP 186
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 187 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--VAAAGMDN 240
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 241 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 300
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 301 HQGPATTVAFS-----RTGEYFASG 320
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH V + +S + + L SGS DS L VW ++ Q GH D V V++SP G
Sbjct: 46 FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 105
Query: 458 KVASGGKDRVLKLWM 472
+ASG +D+ +++W+
Sbjct: 106 LLASGSRDKTVRIWV 120
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 238 (88.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGV 344
Score = 226 (84.6 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 65/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSTISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WD+S C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 214 (80.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 197 (74.4 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 59/204 (28%), Positives = 93/204 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTEYALRTGAFDHTGKQ 306
V ++ + E + T + + TG +
Sbjct: 278 VVECISWAPESSYSTIS-EATGSE 300
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHTGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 184 (69.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 165 (63.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 59/228 (25%), Positives = 107/228 (46%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQW--VASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + ++ A+ ++ K +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSTISEATGSETKK--SGKPGPFL 311
Score = 153 (58.9 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSTISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 152 (58.6 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HTG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 152 (58.6 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 55/223 (24%), Positives = 94/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 215 (80.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 195 (73.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 153 (58.9 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 215 (80.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 195 (73.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 153 (58.9 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 215 (80.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 195 (73.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 153 (58.9 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 215 (80.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 195 (73.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 153 (58.9 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 215 (80.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 195 (73.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 153 (58.9 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 215 (80.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 195 (73.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 153 (58.9 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 215 (80.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 195 (73.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 153 (58.9 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 240 (89.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 215 (80.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 195 (73.7 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 153 (58.9 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 299 (110.3 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 88/297 (29%), Positives = 139/297 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V ++A PD + ASG+GD T+++WDL + TGH + V +A S
Sbjct: 197 ISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHP 256
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S ++ ++CWD +T K + GH + ++ P L+ V+ +DG AR
Sbjct: 257 YLFSCAEDKMVKCWDLETNKVIRH-YHGHLSGVYTLALHPT-LDV----LVTGGRDGVAR 310
Query: 224 IWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ R + LSGHT V+ V D + TGS D T+++W+ GK + L H
Sbjct: 311 VWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKK 370
Query: 283 WVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V +LA TE+ +G+ KQ+ PE E +N I N SG+D
Sbjct: 371 GVRALATHPTEFTFASGSAGSI-KQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFFSGAD 429
Query: 338 DFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVY---FSPDGQWVASASFDKSIKLW 387
+ +M W+ + T G Q + ++ F G + DK+IK+W
Sbjct: 430 NGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIW 486
Score = 224 (83.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 76/298 (25%), Positives = 132/298 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ ++ EP + + F S + D +IWD++ + + L+GH V +
Sbjct: 197 ISGHLGWVRALAVEPDN-----KWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAV 251
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ ++D +K W+ K+IR GH V +LAL T L TG D +
Sbjct: 252 SPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARV 311
Query: 307 YSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ L + + A ++++GS D T+ +W+ A K +T H++
Sbjct: 312 WDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGV-LTHHKK 370
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V + P AS S SIK W G F+ F GH + +S + D + SG+
Sbjct: 371 GVRALATHPTEFTFASGSAG-SIKQWKCPEGAFMQNFEGHNSIINTLSVN-DQNVFFSGA 428
Query: 422 KDSTLKVWDIRTQKLKQDL-----PG--HADE-VFAVDWSPDGEKVASGGKDRVLKLW 471
+ ++ WD +T Q L PG A+ +F + G ++ G D+ +K+W
Sbjct: 429 DNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIW 486
Score = 204 (76.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 68/269 (25%), Positives = 120/269 (44%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH V +A SP L S + D V+ WDL T + GH + V +A
Sbjct: 234 RLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLAL 293
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
LV+G + G + WD +T + + + LSGH TG E V A + ++ S
Sbjct: 294 HPTLDVLVTGGRDGVARVWDMRT-RSNIHVLSGH----TGTVSELVCQEAD-PQVITGSL 347
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D R+WD++ K + L+ H V + + +IK W+ +G ++ +
Sbjct: 348 DSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTFASGSAGSIKQWKCPEGAFMQNFE 407
Query: 279 GHGHWVNSLALSTEYALRTGA-------FD-HTGKQYSSPEEMKK-AALER----YNKIK 325
GH +N+L+++ + +GA +D TG ++ S + + +L+ +
Sbjct: 408 GHNSIINTLSVNDQNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTF 467
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKT 354
+ RL+ G D T+ +W+ + P+T
Sbjct: 468 DQSGSRLICGEADKTIKIWKEDMEATPET 496
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
K + V GH+G V ++ D++ SG+ D T+K+WD+ + +L+ L GH V +
Sbjct: 192 KLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAV 251
Query: 453 SPDGEKVASGGKDRVLKLW 471
SP + S +D+++K W
Sbjct: 252 SPRHPYLFSCAEDKMVKCW 270
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 239 (89.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 214 (80.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVEDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 194 (73.4 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 58/226 (25%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 153 (58.9 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVEDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 237 (88.5 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 60/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS ++ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSAARDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 224 (83.9 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 65/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S + D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 215 (80.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 51/168 (30%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMW 219
Score = 192 (72.6 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 55/190 (28%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSA++D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSAARDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 192 (72.6 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 50/159 (31%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHSGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SA+ DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 182 (69.1 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 39/141 (27%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S ++D T+K+W+++T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWV 262
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 59/226 (26%), Positives = 103/226 (45%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + A D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + + + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Score = 153 (58.9 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + + + +LS + D TL+VWD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 54/223 (24%), Positives = 95/223 (42%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSA++D ++W+V CV +GH V V+ DG + C+ +
Sbjct: 208 VSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE + E K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 7.2e-19, Sum P(2) = 7.2e-19
Identities = 45/184 (24%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + ++D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SAARDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 277 (102.6 bits), Expect = 9.5e-24, P = 9.5e-24
Identities = 89/322 (27%), Positives = 151/322 (46%)
Query: 89 QAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-T 147
QAV R +N + GH+ V +V F P + +ASGS D ++ LW+ Q + +
Sbjct: 47 QAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILS 106
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GHK +L + WS D K + S S L WD ++G+ + GH++ I + +
Sbjct: 107 GHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYI-GHEEVINSVE---ISKR 162
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
VSAS DG IWD ++ + L L +T V G +++G D I VW
Sbjct: 163 GQ-EMLVSASDDGTMGIWDPRQKEAIDYLETE-LPITAVAQSEAGNEVFSGGIDNAIHVW 220
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS-SPEEMKKAALERY--- 321
+ + ++ + GH + SL +S + L + +FD T + + P + Y
Sbjct: 221 DIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGA 280
Query: 322 ------NKIKGN---APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
N I+ + A +++ +GS D ++ +W+ K ++ GH+ VN V F+P+
Sbjct: 281 PVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKI-LYKLPGHKGTVNDVRFTPNN 339
Query: 373 Q-WVASASFDKSIKLWNGTTGK 393
+ + SAS D+++ L G GK
Sbjct: 340 EPIIVSASSDRNLML--GELGK 359
Score = 254 (94.5 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 82/301 (27%), Positives = 134/301 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI--CLSGHTLAVTCV 246
L+GH + + ++P + S S D +W+ + +C LSGH A+ +
Sbjct: 62 LTGHSGEVFAVRFDPT-----AQHIASGSMDRSILLWN-TYGQCENYGILSGHKGAILDL 115
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTG 304
+W D I++ S D T+ W+ G+ IR GH +NS+ +S + A D
Sbjct: 116 QWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGT 175
Query: 305 KQYSSPEEMKKAA--LERYNKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
P + K+A LE I + A + SG D + +W+ K M G
Sbjct: 176 MGIWDPRQ-KEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIR-KKAIVYSMAG 233
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGH-VG---PVYQISW 410
H + + SPD Q + S SFD +++ W+ T + + + G VG + + SW
Sbjct: 234 HMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASW 293
Query: 411 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLK 469
+ + +GS D ++ VWD +T K+ LPGH V V ++P+ E + S DR L
Sbjct: 294 NPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLM 353
Query: 470 L 470
L
Sbjct: 354 L 354
Score = 200 (75.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 51/151 (33%), Positives = 76/151 (50%)
Query: 327 NAPERLVSGSDDFTMFLWEPAVS--KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
N+ + S D T+ P S P +TGH V V F P Q +AS S D+SI
Sbjct: 31 NSAAVVKSSGQDGTLVQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSI 90
Query: 385 KLWNGTTGKF--VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT-QKLKQDLP 441
LWN T G+ + GH G + + WS DS+ + S S D TL WDI + Q++++ +
Sbjct: 91 LLWN-TYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYI- 148
Query: 442 GHADEVFAVDWSPDG-EKVASGGKDRVLKLW 471
GH + + +V+ S G E + S D + +W
Sbjct: 149 GHEEVINSVEISKRGQEMLVSASDDGTMGIW 179
Score = 196 (74.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 72/253 (28%), Positives = 115/253 (45%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT-QGKLIRELKGHGHWVNSLALSTEY 293
L+GH+ V V++ I +GS D +I +W T Q + L GH + L S +
Sbjct: 62 LTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILSGHKGAILDLQWSRDS 121
Query: 294 -ALRTGAFDHTGKQYS--SPEEMKK--AALERYN--KIKGNAPERLVSGSDDFTMFLWEP 346
+ + + D T + S + +++ E N +I E LVS SDD TM +W+P
Sbjct: 122 KTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDP 181
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
+ T + + V S G V S D +I +W+ V GH+ +
Sbjct: 182 RQKEAIDYLET--ELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTIT 239
Query: 407 QISWSADSRLLLSGSKDSTLKVWDIR-----TQKLK--QDLP-GHADEVFAVDWSPDGEK 458
+ S DS+ LLS S DST++ WDIR + ++ P G + W+P G+K
Sbjct: 240 SLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDK 299
Query: 459 VASGGKDRVLKLW 471
+A+G DR + +W
Sbjct: 300 IAAGSGDRSVVVW 312
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 55/230 (23%), Positives = 108/230 (46%)
Query: 253 VIYTGSQDCT-IKVWETTQG--KLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYS 308
V+ + QD T ++ T G I EL GH V ++ T + +G+ D + ++
Sbjct: 35 VVKSSGQDGTLVQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWN 94
Query: 309 SPEEMKKAALERYNK-----IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ + + + +K ++ + + + S S D T+ W+ S Q R GH+++
Sbjct: 95 TYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWD-IESGQRIRRYIGHEEV 153
Query: 363 VNHVYFSPDGQ-WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
+N V S GQ + SAS D ++ +W+ + + + P+ ++ S + SG
Sbjct: 154 INSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETEL-PITAVAQSEAGNEVFSGG 212
Query: 422 KDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D+ + VWDIR + + + GH D + +++ SPD + + S D ++ W
Sbjct: 213 IDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTW 262
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 239 (89.2 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 69/230 (30%), Positives = 118/230 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQTPMF-----KCTGHKNWVLCI 156
T+ HT+ V ++A D + + S D ++ LW L + + + TGH ++V +
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+DG+ +SGS GEL+ WD TG+ S GH K + +++ + R+ VSA
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGE-STRRFVGHTKDVLSVAFSTDN-----RQIVSA 123
Query: 217 SKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGGDGVIYT---GSQDCTIKVWETTQ 270
S+D ++W+ +L +C +S GH V+CV++ + ++ T S D T+KVW
Sbjct: 124 SRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 271 GKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
KL L GH ++N++A+S + +L +G D + E K +LE
Sbjct: 183 CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 232 (86.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 59/189 (31%), Positives = 96/189 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL T + GH VL +A+S D +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 164 HLVSGSKAGELQCWDPQTG-KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS S+ ++ W+ K + + GHK+W++ + + P N VSAS D
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSP---NTLVPTIVSASWDKTV 175
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W++ K L+GH+ + V DG + +G +D I +W+ +GK + L+ G
Sbjct: 176 KVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-G 234
Query: 282 HWVNSLALS 290
++SL S
Sbjct: 235 SIIHSLCFS 243
Score = 224 (83.9 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 57/144 (39%), Positives = 85/144 (59%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SGS D + LW+ A + + R GH + V V FS D + + SAS D++IKLWN T G
Sbjct: 79 LSGSWDGELRLWDLATGESTR-RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLG 136
Query: 393 --KF-VAVFRGHVGPVYQISWSADSRL--LLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
K+ ++ GH V + +S ++ + ++S S D T+KVW+++ KL+ L GH+ +
Sbjct: 137 ECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYL 196
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
V SPDG ASGGKD V+ LW
Sbjct: 197 NTVAVSPDGSLCASGGKDGVILLW 220
Score = 209 (78.6 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 49/150 (32%), Positives = 83/150 (55%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKT------RMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+V+ S D ++ LW+ ++K+ K+ RMTGH V V S DGQ+ S S+D ++
Sbjct: 31 IVTSSRDKSIILWK--LTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELR 88
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ-KLK-QDLPGH 443
LW+ TG+ F GH V +++S D+R ++S S+D T+K+W+ + K + GH
Sbjct: 89 LWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGH 148
Query: 444 ADEVFAVDWSPDG--EKVASGGKDRVLKLW 471
+ V V +SP+ + S D+ +K+W
Sbjct: 149 KEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Score = 192 (72.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 52/178 (29%), Positives = 90/178 (50%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL--NTQTPMFKCTGHKNWVLCIAWSADG- 162
GHT+ VLSVAFS D RQ+ S S D T++LW+ + + + GHK WV C+ +S +
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTL 162
Query: 163 -KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+VS S ++ W+ Q K N L+GH ++ ++ P + C S KDG
Sbjct: 163 VPTIVSASWDKTVKVWNLQNCKLR-NTLAGHSGYLNTVAVSPD--GSLC---ASGGKDGV 216
Query: 222 ARIWDVSLRKCVICL-SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+WD++ K + L +G + C + + + + +I++W+ ++ +LK
Sbjct: 217 ILLWDLAEGKKLYSLEAGSIIHSLC--FSPNRYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 176 (67.0 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 70/268 (26%), Positives = 119/268 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
+ H +T I+ PV N+ V++S+D +W D S ++GH+ V
Sbjct: 11 MCAHTDMVTAIA-TPVD-NSDV--IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG +GS D +++W+ G+ R GH V S+A ST+ + + + D
Sbjct: 67 QDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 302 HTGKQYSSPEEMKKAALE-----RYNKIKGNAPERLV----SGSDDFTMFLWEPAVSKQP 352
T K +++ E K E + +P LV S S D T+ +W K
Sbjct: 127 RTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
T + GH +N V SPDG AS D I LW+ GK ++ G + +
Sbjct: 187 NT-LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHSLCFS 243
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
+R L + ++++++WD+ ++ + +DL
Sbjct: 244 PNRYWLCAATENSIRIWDLESKSVVEDL 271
Score = 66 (28.3 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 408 ISWSADSRLLLSGSKDSTLKVWDI 431
++WSAD L SG D ++VW I
Sbjct: 300 LNWSADGNTLFSGYTDGVIRVWGI 323
Score = 59 (25.8 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLP---GHADEVF---AVDWSPDGEKVASGGKDRVLKL 470
L S S LKV D++ + K D G+ +V +++WS DG + SG D V+++
Sbjct: 262 LESKSVVEDLKV-DLKAEAEKTDGSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRV 320
Query: 471 W 471
W
Sbjct: 321 W 321
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 233 (87.1 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 60/206 (29%), Positives = 96/206 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ TG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTMKMWEVATGY-CVKTFTGHREWVRMV--RP---NQDGTLLASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGV 344
Score = 221 (82.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 66/224 (29%), Positives = 103/224 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP--VH------------ 205
DG L S S ++ W T K L H+ + ISW P H
Sbjct: 244 QDGTLLASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESAHPTISEATGSENK 302
Query: 206 -LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCT 262
P +S S+D ++WD+S C++ L GH V V + GG V+ + + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVV-SCADDKT 361
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+++W+ + ++ L H H+V SL + TG+ D T K
Sbjct: 362 LRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVK 405
Score = 208 (78.3 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 49/168 (29%), Positives = 85/168 (50%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E + G + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEITLGGPVGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ G F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMW 219
Score = 194 (73.4 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 59/204 (28%), Positives = 93/204 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTMK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V+ CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTEYALRTGAFDHTGKQ 306
V ++ + E A T + + TG +
Sbjct: 278 VVECISWAPESAHPTIS-EATGSE 300
Score = 193 (73.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 45/124 (36%), Positives = 66/124 (53%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S S D T+ LW+ + +T M GH V+ V P+G + SAS DK++K+W T
Sbjct: 165 LASCSADMTIKLWDFQGFECIRT-MHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT 223
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
G V F GH V + + D LL S S D T++VW + T++ K +L H V +
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 452 WSPD 455
W+P+
Sbjct: 284 WAPE 287
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 MVSASEDATIKVWDYEAGDFERT-LKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W++ T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLLASCSNDQTVRVWV 262
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 62/187 (33%), Positives = 91/187 (48%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + ++ + S+D TIKVW+ G R LKGH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D TM +WE A
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTMKMWEVA 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H V
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 408 ISWSADS 414
ISW+ +S
Sbjct: 282 ISWAPES 288
Score = 171 (65.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 59/223 (26%), Positives = 97/223 (43%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V+ CV +GH V V+ DG + C+ +
Sbjct: 208 VSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLAS---CS-------NDQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERY---NKIKGNAP 329
+R WV + E +H + S +PE E NK G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ + T + GH V V F P G++V S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMT-LVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ + H V + + S +++GS D T+KVW+ R
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/226 (25%), Positives = 101/226 (44%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SLMVSASEDATIKVWDYEAGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFL 311
Score = 149 (57.5 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 35/128 (27%), Positives = 63/128 (49%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P + + TG + N P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESAHPTISEATGSE---NKKSGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDN 339
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
V + + R ++S + D TL++WD + ++ + L H V ++D+ V +G
Sbjct: 340 WVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGS 399
Query: 464 KDRVLKLW 471
D+ +K+W
Sbjct: 400 VDQTVKVW 407
Score = 143 (55.4 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 43/184 (23%), Positives = 80/184 (43%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD + G L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFE-RTLKGHTDSVQDISFDQ 160
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
+ S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 161 TG-----KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
T+K+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 275 (101.9 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 89/329 (27%), Positives = 156/329 (47%)
Query: 165 LVSGSKAGELQCWDPQTGKPSGNP---LSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
LV+ +++ +L P P LSGH+ + + P N S+ D
Sbjct: 25 LVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFHP---NGAT--LASSGYDRL 79
Query: 222 ARIWDVSLRKC--VICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELK 278
+W+V C L GH+ AV + + DG ++++ S D T+ VW++ G+ ++ LK
Sbjct: 80 ILMWNV-YGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLK 138
Query: 279 GHGHWVNSL--ALSTEYALRTGAFDHTGKQYSSPEEMKKAALER-YNKIK---GNAPERL 332
GH +VNS A TG+ D T K + ++ + Y + + +++
Sbjct: 139 GHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQI 198
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN---- 388
+SG D + +W+ +K + M GH V + S DG ++ S S D S+++W+
Sbjct: 199 ISGGIDNDIKVWDLRQNKLIYS-MQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPF 257
Query: 389 GTTGKFVAVFRGHVGP----VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
+ V +F+G+V + + SWSAD + +GS D + +WD T+++ LPGHA
Sbjct: 258 APKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHA 317
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
V V + P+ V SG D+ +L++G
Sbjct: 318 GSVNEVAFHPEEPIVLSGSSDK--RLYIG 344
Score = 241 (89.9 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 80/298 (26%), Positives = 141/298 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
++GH V F P+G LAS D + +W++ + GH V+ + ++ DG
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDG 111
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L S S + WD +TG+ L GH ++ S P P + + S DG
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKR-LKGHTSFVN--SCFPAR-RGP-QLACTGSDDGTV 166
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ +K + +T V V + D +I +G D IKVW+ Q KLI ++GH
Sbjct: 167 KLWDIR-KKASVHTFQNTYQVLSVTFNDTSDQII-SGGIDNDIKVWDLRQNKLIYSMQGH 224
Query: 281 GHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE--MK--KAALERYNK----IKGN 327
G V L+LS + + L + + D++ + + +P+E +K + + + K +
Sbjct: 225 GDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 284
Query: 328 AP-ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
A ++ +GS D +++W+ +++ ++ GH VN V F P+ V S S DK +
Sbjct: 285 ADGSKIAAGSADRFVYIWD-TTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRL 341
Score = 234 (87.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 82/300 (27%), Positives = 130/300 (43%)
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIW----DVSLRKCVICLSGHTLAVTCVKW 248
KK + ++ PV + P V+A++ SL+ ++ LSGH V C K+
Sbjct: 5 KKRVADMAVVPVGVKRPRTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKF 64
Query: 249 GGDGVIYTGS-QDCTIKVWETTQG-KLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGK 305
+G S D I +W + LKGH V L +T+ +L A D T
Sbjct: 65 HPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVC 124
Query: 306 QYSSPEEMKKAALERYNKIKGNA------PERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
+ S + L+ + + P+ +GSDD T+ LW+ + K+ +
Sbjct: 125 VWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWD--IRKKASVHTFQN 182
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
V V F+ + S D IK+W+ K + +GH V +S SAD LLS
Sbjct: 183 TYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLS 242
Query: 420 GSKDSTLKVWDIRT----QKLKQDLPG--HADE--VFAVDWSPDGEKVASGGKDRVLKLW 471
S D++++VWDIR ++ + G H E + WS DG K+A+G DR + +W
Sbjct: 243 NSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIW 302
Score = 202 (76.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 75/308 (24%), Positives = 141/308 (45%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 46 QAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGH----SGA 101
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G + TG
Sbjct: 102 VME-LHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTG 160
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + + + + + V S+ + T + +G D+ K + +
Sbjct: 161 SDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIY 219
Query: 317 ALERY-NKIKG---NAP-ERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+++ + + + G +A L+S S D ++ +W+ P K+ ++ G+ ++ +
Sbjct: 220 SMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLL 279
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+S DG +A+ S D+ + +W+ TT + V GH G V ++++ + ++LSGS D
Sbjct: 280 RCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDK 339
Query: 425 TLKVWDIR 432
L + +I+
Sbjct: 340 RLYIGEIQ 347
Score = 178 (67.7 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH+ AV+ + ++ DG L S S D TV +WD T + + GH ++V +
Sbjct: 93 ATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARR 152
Query: 162 GKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G L +GS G ++ WD + K S + + ++ V N + +S D
Sbjct: 153 GPQLACTGSDDGTVKLWDIRK-KASVHTFQNTYQVLS------VTFNDTSDQIISGGIDN 205
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D ++WD+ K + + GH +VT + DG + + S D +++VW+
Sbjct: 206 DIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD 253
Score = 162 (62.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 48/170 (28%), Positives = 80/170 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
+T VLSV F+ Q+ SG D +++WDL ++ GH + V ++ SADG +L+
Sbjct: 182 NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL 241
Query: 167 SGSKAGELQCWDPQTGKPS--------GNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S S ++ WD + P GN + +K + SW +A + + S
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERCVKIFQGN-VHNFEKNLLRCSW-----SADGSKIAAGSA 295
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D IWD + R+ V L GH +V V + + ++ +GS D + + E
Sbjct: 296 DRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGE 345
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GH---- 149
N+ ++ GH ++V ++ S DG L S S D +VR+WD+ P +C G+
Sbjct: 215 NKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNF 274
Query: 150 -KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
KN + C +WSADG + +GS + WD T + L GH + +++ P
Sbjct: 275 EKNLLRC-SWSADGSKIAAGSADRFVYIWDTTTRRIVYK-LPGHAGSVNEVAFHP 327
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 300 (110.7 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 97/348 (27%), Positives = 170/348 (48%)
Query: 92 FRIRPVNRCSATIAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
+R RPV + + GH + V++ + FS G ++ SGS D T+++W + GH
Sbjct: 979 WRSRPVRK-PKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHT 1035
Query: 151 NWVLCIAWSAD--GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
V WS+ G ++SGS L+ WD +G + L GH + +HL+
Sbjct: 1036 GGV----WSSQMSGNIIISGSTDRTLKVWDMDSGA-CVHTLQGHTSTV-----RCMHLHG 1085
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET 268
+ VS S+D R+WD+ C+ L GH AV CV++ G +I +G+ D +K+W
Sbjct: 1086 S--KVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGK-LIVSGAYDYMVKIWHP 1142
Query: 269 TQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA 328
+ + + L+GH + V SL + + +G+ D + + + K L + +
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQFDGLHVV-SGSLDTSIRVWDVETGNCKHTLMGHQSLTSGM 1201
Query: 329 PER---LVSGSDDFTMFLWEPAVSKQPKTRMTG---HQQLVNHVYFSPDGQWVASASFDK 382
R LVSG+ D T+ +W+ + +T ++G H V + F+ ++V ++S D
Sbjct: 1202 ELRQNILVSGNADSTVKVWDITTGQCLQT-LSGPNKHHSAVTCLQFN--SRFVVTSSDDG 1258
Query: 383 SIKLWNGTTGKF----VAVFRGHVGPVYQISWSADSRLLLS-GSKDST 425
++KLW+ TG F VA+ G G V + D++L+ + GS++ T
Sbjct: 1259 TVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGT 1306
Score = 281 (104.0 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 85/293 (29%), Positives = 143/293 (48%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ +S G +VSGS L+ W GK L GH TG W +
Sbjct: 992 GHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCL-RTLVGH----TGGVWSS-QM 1043
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++WD+ CV L GHT V C+ G V+ +GS+D T++VW
Sbjct: 1044 SGNI--IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVV-SGSRDATLRVW 1100
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ QG + L GH V + + + +GA+D+ K + + L+ + N++
Sbjct: 1101 DIEQGSCLHVLVGHLAAVRCVQYDGKLIV-SGAYDYMVKIWHPERQECLHTLQGHTNRVY 1159
Query: 326 GNAPERL--VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ L VSGS D ++ +W+ T M GHQ L + + + + S + D +
Sbjct: 1160 SLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLM-GHQSLTSGMELRQN--ILVSGNADST 1216
Query: 384 IKLWNGTTGKFVAVFRG---HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT 433
+K+W+ TTG+ + G H V + ++ SR +++ S D T+K+WD++T
Sbjct: 1217 VKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWDVKT 1267
Score = 258 (95.9 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 78/267 (29%), Positives = 122/267 (45%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + G+ +I +GS D T+KVW+ G
Sbjct: 1007 RIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN-IIISGSTDRTLKVWDMDSG 1065
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE----EMKKAALERYNKIKGN 327
+ L+GH V + L + +G+ D T + + + + L ++ +
Sbjct: 1066 ACVHTLQGHTSTVRCMHLHGSKVV-SGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD 1124
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ +VSG+ D+ + +W P + T + GH V + F DG V S S D SI++W
Sbjct: 1125 G-KLIVSGAYDYMVKIWHPERQECLHT-LQGHTNRVYSLQF--DGLHVVSGSLDTSIRVW 1180
Query: 388 NGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG---HA 444
+ TG GH +L+SG+ DST+KVWDI T + Q L G H
Sbjct: 1181 DVETGNCKHTLMGHQS--LTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHH 1238
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V + ++ V + D +KLW
Sbjct: 1239 SAVTCLQFN--SRFVVTSSDDGTVKLW 1263
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 286 (105.7 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 96/354 (27%), Positives = 163/354 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +A+ S+ FSP G+Q+ASGS D +V +W++ Q+ ++ TGHK+ V C+ +S L
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S S+ ++ W P K H TG S V +A + ++AS D ++W
Sbjct: 76 ASSSRDKTVRLWVPSV-KGESVLFRAH----TG-SVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIR---ELKGHG 281
V +K + L H V C ++ DG + S D T+K+W+ + +LI E G+
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYS 189
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLV 333
+V+ ST + T + D+T + + ++ AA+ + GN L+
Sbjct: 190 SYVDFHPSST--CIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGN---HLL 244
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTT 391
+ S D T+ + + + T + GHQ + V FS G ASA D+ + +W N +
Sbjct: 245 TASSDSTLKILDLLEGRLLYT-LHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDS 303
Query: 392 GKFVAVF---RGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK-LKQDLP 441
+ V R H P Q S +A SG K + + ++ +++ P
Sbjct: 304 VDYSRVLQQKRDHRTPSAQASGAAGDPESRSGQKTEVSPLLGVSAERSVREPTP 357
Score = 266 (98.7 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 77/289 (26%), Positives = 140/289 (48%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GH+ IT + + P ++ S S D +W++ + +GH AVTCV++
Sbjct: 16 GHRDAITSLDFSPSG-----KQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSP 70
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
++ + S+D T+++W + +G+ + + H V S+ S + +L T + D + K +
Sbjct: 71 SAHLLASSSRDKTVRLWVPSVKGESVL-FRAHTGSVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 308 SSPEEMKKAALERYN---KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
S + L +N + +P+ +VS SDD T+ LW+ A S+Q
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD-ASSRQLIHTFCEPGGY 188
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
++V F P +A+AS D ++++W+ T + ++ H V +S+ LL+ S
Sbjct: 189 SSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASS 248
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DSTLK+ D+ +L L GH V +S G++ AS G D+ + +W
Sbjct: 249 DSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 216 (81.1 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 56/183 (30%), Positives = 87/183 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT +V SV FS DG+ L + S D +++LW ++ Q + H NWV C +S
Sbjct: 95 SVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG--ISWEPVHLNAPCRRFVSASK 218
DG+ +VS S ++ WD S L H G S+ H ++ C +AS
Sbjct: 155 DGQLMVSVSDDRTVKLWDA-----SSRQLI-HTFCEPGGYSSYVDFHPSSTC--IATASS 206
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIREL 277
D R+WD+ + H+ AV + + G + T S D T+K+ + +G+L+ L
Sbjct: 207 DNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTL 266
Query: 278 KGH 280
GH
Sbjct: 267 HGH 269
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH + + +S + + SGS D+++ VW+++ Q GH D V V +SP
Sbjct: 14 FKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAH 73
Query: 458 KVASGGKDRVLKLWM 472
+AS +D+ ++LW+
Sbjct: 74 LLASSSRDKTVRLWV 88
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 288 (106.4 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 80/248 (32%), Positives = 121/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + SA
Sbjct: 202 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP 261
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 262 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 315
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV VK + + TGS D TI++W+ GK L H
Sbjct: 316 IWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKK 375
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 376 SVRAVILHPRHYTFASGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGAD 434
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 435 NGTMHLWD 442
Score = 243 (90.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 81/298 (27%), Positives = 141/298 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 202 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 256
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 257 SARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 316
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + +K A E ++V+GS D T+ LW+ V+ + + +T H++
Sbjct: 317 WDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWD-LVAGKTRVTLTNHKK 375
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V V P AS S D +IK W G F+ GH + ++ ++D +L+SG+
Sbjct: 376 SVRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLTVNSDG-VLVSGA 433
Query: 422 KDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ T+ +WD RT Q++ + PG D +FA + ++ + D+ +K++
Sbjct: 434 DNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACVFDQSESRLLTAEADKTIKVY 491
Score = 190 (71.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 78/324 (24%), Positives = 137/324 (42%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 203 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VSA 258
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 259 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 316
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 317 WDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKS 376
Query: 324 IKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
++ P SGS D + W+ + ++GH ++N + + DG V+ A
Sbjct: 377 VRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQN-LSGHNAIINTLTVNSDGVLVSGAD 434
Query: 380 FDKSIKLWNGTTG-KF----VAVFRGHVGP---VYQISWSADSRLLLSGSKDSTLKVWDI 431
+ ++ LW+ TG F AV G + ++ + LL+ D T+KV+
Sbjct: 435 -NGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACVFDQSESRLLTAEADKTIKVY-- 491
Query: 432 RTQKLKQDLPGHADEVFAVDWSPD 455
K+D +E + W P+
Sbjct: 492 -----KEDDTA-TEETHPISWKPE 509
Score = 185 (70.2 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 55/209 (26%), Positives = 91/209 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 288 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQV 347
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
V+GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 348 VTGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVILHPRHYT-----FASGSPD-NIKQW 400
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 401 KFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 457
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + FD + + + E K
Sbjct: 458 PGSLDSESGIFACVFDQSESRLLTAEADK 486
Score = 171 (65.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 46/174 (26%), Positives = 77/174 (44%)
Query: 300 FDHTG-KQYSSPEEMKKAALERY-NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
+ H G + S P M A +E NK P++ + W P K + ++
Sbjct: 150 YRHAGISERSQPPGMSMAMMEPGGNKNSALVPKK----APTMPKPQWHPPW-KLYRV-IS 203
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLL 417
GH V + P QW + S D++IK+W+ +GK GH+ V + SA S L
Sbjct: 204 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYL 263
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S +D +K WD+ K+ + GH V+ +D P + + + +D ++W
Sbjct: 264 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIW 317
Score = 169 (64.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 56/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 243 SLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 302
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + V+ S D
Sbjct: 303 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVKCQAAE---P--QVVTGSHDTTI 356
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 357 RLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLSGHN 415
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 416 AIINTLTVNSDGVLVSGADNGT 437
Score = 158 (60.7 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKG--- 326
KL R + GH WV +A+ TG+ D T K + K +L + + ++G
Sbjct: 197 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 256
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+P L S +D + W+ +K + GH V + P + + S D +
Sbjct: 257 SARSPY-LFSCGEDKQVKCWDLEYNKVIR-HYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 314
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
++W+ T V GH V + A +++GS D+T+++WD+ K + L H
Sbjct: 315 RIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHK 374
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V AV P ASG D + K W
Sbjct: 375 KSVRAVILHPRHYTFASGSPDNI-KQW 400
Score = 122 (48.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 327 TLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRH 386
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 387 YTFASGSP-DNIKQWKFPDGNFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 438
Query: 223 RIWD 226
+WD
Sbjct: 439 HLWD 442
Score = 41 (19.5 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVY 86
V+ L+ K + +++D+ VPL E HKV + L Y
Sbjct: 10 VHTLVFRSLKRTHDMFVADNAKPVPLDD--ESHKVKMAVKLRTEY 52
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 271 (100.5 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 85/305 (27%), Positives = 150/305 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGP----VYQI 408
GH V + S +G ++ S + D ++++W+ + V +F+G+V + +
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRC 292
Query: 409 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
SWS D + +GS D + VWD ++++ LPGHA + V + PD + S D+
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK-- 350
Query: 469 KLWMG 473
+L+MG
Sbjct: 351 RLYMG 355
Score = 266 (98.7 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 89/320 (27%), Positives = 153/320 (47%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 ---MKKAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+ + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 233 (87.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 74/262 (28%), Positives = 119/262 (45%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL--IRELKGHGHWV 284
SL+ ++ LSGH V C K+ +G + + D I +W G LKGH V
Sbjct: 55 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV 113
Query: 285 NSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PERLVSGSD 337
L +T+ + L + + D T + S + L+ + + P+ + +GSD
Sbjct: 114 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 173
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ LW+ +T +Q L V F+ + S D IK+W+ K
Sbjct: 174 DGTVKLWDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 231
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPG--HADE--VFA 449
RGH V +S S++ LLS + D+T++VWD+R ++ + G H E +
Sbjct: 232 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLR 291
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
WSPDG K+A+G DR + +W
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVW 313
Score = 209 (78.6 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 73/308 (23%), Positives = 140/308 (45%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 57 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 112
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 113 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ R+ G+ ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLL 290
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++++ D ++LS S D
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Query: 425 TLKVWDIR 432
L + +I+
Sbjct: 351 RLYMGEIQ 358
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 271 (100.5 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 85/305 (27%), Positives = 150/305 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGP----VYQI 408
GH V + S +G ++ S + D ++++W+ + V +F+G+V + +
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 409 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
SWS D + +GS D + VWD ++++ LPGHA + V + PD + S D+
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK-- 350
Query: 469 KLWMG 473
+L+MG
Sbjct: 351 RLYMG 355
Score = 267 (99.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 90/320 (28%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 233 (87.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 74/262 (28%), Positives = 119/262 (45%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL--IRELKGHGHWV 284
SL+ ++ LSGH V C K+ +G + + D I +W G LKGH V
Sbjct: 55 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV 113
Query: 285 NSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PERLVSGSD 337
L +T+ + L + + D T + S + L+ + + P+ + +GSD
Sbjct: 114 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 173
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ LW+ +T +Q L V F+ + S D IK+W+ K
Sbjct: 174 DGTVKLWDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 231
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPG--HADE--VFA 449
RGH V +S S++ LLS + D+T++VWD+R ++ + G H E +
Sbjct: 232 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
WSPDG K+A+G DR + +W
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVW 313
Score = 206 (77.6 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 72/308 (23%), Positives = 140/308 (45%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 57 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 112
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 113 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++++ D ++LS S D
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Query: 425 TLKVWDIR 432
L + +I+
Sbjct: 351 RLYMGEIQ 358
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 271 (100.5 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 85/305 (27%), Positives = 150/305 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGP----VYQI 408
GH V + S +G ++ S + D ++++W+ + V +F+G+V + +
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 409 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
SWS D + +GS D + VWD ++++ LPGHA + V + PD + S D+
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK-- 350
Query: 469 KLWMG 473
+L+MG
Sbjct: 351 RLYMG 355
Score = 267 (99.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 90/320 (28%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 233 (87.1 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 74/262 (28%), Positives = 119/262 (45%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL--IRELKGHGHWV 284
SL+ ++ LSGH V C K+ +G + + D I +W G LKGH V
Sbjct: 55 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV 113
Query: 285 NSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PERLVSGSD 337
L +T+ + L + + D T + S + L+ + + P+ + +GSD
Sbjct: 114 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 173
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ LW+ +T +Q L V F+ + S D IK+W+ K
Sbjct: 174 DGTVKLWDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 231
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPG--HADE--VFA 449
RGH V +S S++ LLS + D+T++VWD+R ++ + G H E +
Sbjct: 232 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
WSPDG K+A+G DR + +W
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVW 313
Score = 206 (77.6 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 72/308 (23%), Positives = 140/308 (45%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 57 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 112
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 113 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++++ D ++LS S D
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Query: 425 TLKVWDIR 432
L + +I+
Sbjct: 351 RLYMGEIQ 358
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 271 (100.5 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 85/305 (27%), Positives = 150/305 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 62 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 115
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 176 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 231
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGP----VYQI 408
GH V + S +G ++ S + D ++++W+ + V +F+G+V + +
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 291
Query: 409 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
SWS D + +GS D + VWD ++++ LPGHA + V + PD + S D+
Sbjct: 292 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDK-- 349
Query: 469 KLWMG 473
+L+MG
Sbjct: 350 RLYMG 354
Score = 267 (99.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 90/320 (28%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 41 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 99
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 156
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 157 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 212
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 272
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 273 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 331
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 332 EVAFHPDEPIIISASSDKRL 351
Score = 233 (87.1 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 74/262 (28%), Positives = 119/262 (45%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL--IRELKGHGHWV 284
SL+ ++ LSGH V C K+ +G + + D I +W G LKGH V
Sbjct: 54 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV 112
Query: 285 NSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PERLVSGSD 337
L +T+ + L + + D T + S + L+ + + P+ + +GSD
Sbjct: 113 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 172
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ LW+ +T +Q L V F+ + S D IK+W+ K
Sbjct: 173 DGTVKLWDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 230
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPG--HADE--VFA 449
RGH V +S S++ LLS + D+T++VWD+R ++ + G H E +
Sbjct: 231 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
WSPDG K+A+G DR + +W
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVW 312
Score = 204 (76.9 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 71/308 (23%), Positives = 140/308 (45%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 56 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 111
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 112 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 170
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + I+ + + + V ++ + T + +G D+ K + +
Sbjct: 171 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 229
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++++ D +++S S D
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDK 349
Query: 425 TLKVWDIR 432
L + +I+
Sbjct: 350 RLYMGEIQ 357
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 283 (104.7 bits), Expect = 4.6e-23, P = 4.6e-23
Identities = 84/307 (27%), Positives = 139/307 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + +QLASGS D+ + +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + FV+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQSFVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C K+ DG +I + S D T+K+W+ + + + HG +V
Sbjct: 131 ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA--PER--LVSGSDD 338
+ + D+T K + + ++ + G + P L++ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSD 250
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVF 398
T+ + + + T + GHQ V FS G++ AS D+ + +W F V
Sbjct: 251 STLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN---FDIVD 306
Query: 399 RGHVGPV 405
G V V
Sbjct: 307 HGEVTKV 313
Score = 281 (104.0 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 80/289 (27%), Positives = 144/289 (49%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GH+ +T + + +N ++ S S D +W + + +GH AVTCV +
Sbjct: 17 GHRDAVTCVDFS---INT--KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ +GS+D T+++W +G+ + H V S+ ++ + T + D T K +
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 308 SSPEEMKKAALERY-NKIKGN--APE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
++ + +L ++ N ++ +P+ RL VS SDD T+ LW+ + S++ H
Sbjct: 131 ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS-SRECVHSYCEHGGF 189
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
V +V F P G +A+A D ++K+W+ T + + ++ H V +S+ L++ S
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
DSTLK+ D+ +L L GH V +S GE ASGG D + +W
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 233 (87.1 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D TV++W + Q +F + H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD ++ + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH V + +S +++ L SGS DS L VW ++ Q GH D V V++SP G
Sbjct: 15 FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 458 KVASGGKDRVLKLWM 472
+ASG +D+ +++W+
Sbjct: 75 LLASGSRDKTVRIWV 89
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 286 (105.7 bits), Expect = 8.7e-21, Sum P(2) = 8.7e-21
Identities = 93/387 (24%), Positives = 181/387 (46%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD-LNTQTP-----MFKCTGHKNWVLCIAW 158
+ H++ V S +SPDG +AS S D T+++W+ +T + + + +
Sbjct: 1647 SAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKF 1706
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
SA+ K +++ + ++ +D + K + + H K + S L+ V+ S
Sbjct: 1707 SANSKQILATTMKNDVLLFDVNSQKLI-SVMGNHSKSVNHCS-----LSNDGNYIVTGSD 1760
Query: 219 DGDARIWDVSLRKCV--ICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIR 275
D A++W +L + + G A C+ + ++ G+ DCT+++++ + + R
Sbjct: 1761 DATAKVWSSTLGTQLTNFLIPGDCWA-NCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYR 1819
Query: 276 EL-KGHGHW--VNSLALSTEYALRTGAFDH------TGKQYSSPEEMKKAALERYNKIKG 326
E+ K HGH + S+ S L + + + + ++KA + N I
Sbjct: 1820 EVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISF 1879
Query: 327 NAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
N L+S SDD++ +W + + G + H +SPDG+++A+ S D SI
Sbjct: 1880 NPTNECELISCSDDYSTKVWSRFTTSTTLST-EGSTNTIKHCVYSPDGKYIATVSRDCSI 1938
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
++ ++ K + +GH V ++S DS+ L+SG D L+VW+I+TQK L GH+
Sbjct: 1939 AVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHS 1998
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ ++ D + + S D +K+W
Sbjct: 1999 SSIEKAFFTKDQKYIISASFDGSVKVW 2025
Score = 284 (105.0 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 104/434 (23%), Positives = 184/434 (42%)
Query: 66 PLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPV--NRCSATIAGHTEAVLSVAFSPDGRQL 123
P SY HKV+ + + ++ + +P + C TI G + + +S DG +
Sbjct: 1480 PNKSYC--HKVAASESGGLKHKTWIEWLNKPQIKDSCKQTITGLEDGATACCYSRDGSMI 1537
Query: 124 ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGK 183
AS D+ + ++ + + + GH NW+ C ++S DGK L S S + WD G
Sbjct: 1538 ASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGN 1597
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLA 242
+ H + + + P N +S + D I++ S + S H+
Sbjct: 1598 QI-HQFKDHSRAVNYCEFSPTANNL----LMSCAWDSSIIIFNTSDKNIFRNFRSAHSKP 1652
Query: 243 VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAF 300
V W DG +I + S D TIK+W LK H +++ S Y ++++ F
Sbjct: 1653 VNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLK---HVIDA---SLSYGSIKSCKF 1706
Query: 301 DHTGKQYSSPEEMKKAAL------ERYNKIKGNAPER------------LVSGSDDFTMF 342
KQ + MK L ++ + GN + +V+GSDD T
Sbjct: 1707 SANSKQILATT-MKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAK 1765
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN---GTTGKFVAVFR 399
+W + Q + N + FSP +A + D +++L++ T + VA
Sbjct: 1766 VWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLH 1825
Query: 400 GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP-GHADEVFAVDWSPDGE- 457
GH + I++S L+ S S+D +KVW+++T K + + H D + + ++P E
Sbjct: 1826 GHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNEC 1885
Query: 458 KVASGGKDRVLKLW 471
++ S D K+W
Sbjct: 1886 ELISCSDDYSTKVW 1899
Score = 278 (102.9 bits), Expect = 7.7e-20, Sum P(2) = 7.7e-20
Identities = 98/375 (26%), Positives = 174/375 (46%)
Query: 110 AVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGS 169
++ S FS + +Q+ + + V L+D+N+Q + H V + S DG ++V+GS
Sbjct: 1700 SIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGS 1759
Query: 170 KAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS- 228
+ W G N L W +++ P P V A+ D R++DVS
Sbjct: 1760 DDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQ---PLLA-VGAT-DCTVRLFDVSS 1814
Query: 229 --LRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL-KGHGHWV 284
+ + V L GHT A+T + + G +I + S+D IKVW K + K H +
Sbjct: 1815 NTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPI 1874
Query: 285 NSLALS--TEYALRTGAFDHTGKQYSSPEEMKKAALE-RYNKIKG--NAPER--LVSGSD 337
N ++ + E L + + D++ K +S + E N IK +P+ + + S
Sbjct: 1875 NCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSR 1934
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D ++ ++ + SK+ R+ GH VN FSPD + + S +D ++++WN T K +
Sbjct: 1935 DCSIAVYLCS-SKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLC 1993
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
+GH + + ++ D + ++S S D ++KVWD + L H + V S D
Sbjct: 1994 LKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDAS 2052
Query: 458 -KVASGGKDRVLKLW 471
++ S D ++K W
Sbjct: 2053 GRIFSSSDDGIIKSW 2067
Score = 274 (101.5 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 88/313 (28%), Positives = 145/313 (46%)
Query: 114 VAFSPDGRQLASGSGDTTVRLWDLNTQT---PMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+AFSP LA G+ D TVRL+D+++ T + K GH + I +S G + S S+
Sbjct: 1789 LAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSE 1848
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
++ W+ QT K H I IS+ P + C +S S D ++W
Sbjct: 1849 DLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTN---ECE-LISCSDDYSTKVWSRFTT 1904
Query: 231 KCVICLSGHTLAVT-CVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
+ G T + CV + DG I T S+DC+I V+ + KL+ LKGH WVN
Sbjct: 1905 STTLSTEGSTNTIKHCV-YSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCT 1963
Query: 289 LSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA-----PERLVSGSDDFTMF 342
S + L +G +D + ++ + + L+ ++ A + ++S S D ++
Sbjct: 1964 FSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVK 2023
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW-VASASFDKSIKLWNGTTGKFVAVFRGH 401
+W+ + T + HQ ++ V S D + S+S D IK W G +A GH
Sbjct: 2024 VWDAQFGSEI-TSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGH 2081
Query: 402 VGPVYQISWSADS 414
GP+ Q+ ++ +S
Sbjct: 2082 SGPIKQVQFNPNS 2094
Score = 230 (86.0 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 93/387 (24%), Positives = 168/387 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+ + +FS DG+ LAS S D TV +WDL + + H V +S
Sbjct: 1559 TLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTA 1618
Query: 163 KHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+L+ S + + ++ N S H K + W P + K +
Sbjct: 1619 NNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWN 1678
Query: 222 ARIWDVSLR---KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIREL 277
+D + K VI S ++ K+ + I + + +++ KLI +
Sbjct: 1679 P--FDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVM 1736
Query: 278 KGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSP--EEMKKAAL--ERYNKIKGNAPER 331
H VN +LS + Y + TG+ D T K +SS ++ + + + +P +
Sbjct: 1737 GNHSKSVNHCSLSNDGNYIV-TGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQ 1795
Query: 332 --LVSGSDDFTMFLWEPAVSK--QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L G+ D T+ L++ + + + ++ GH + + + FSP G +AS S D IK+W
Sbjct: 1796 PLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVW 1855
Query: 388 NGTTGKF-VAVFRGHVGPVYQISWSADSRL-LLSGSKDSTLKVWDIRTQKLKQDLPGHAD 445
N T K + + H P+ IS++ + L+S S D + KVW T G +
Sbjct: 1856 NVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTN 1915
Query: 446 EVFAVDWSPDGEKVASGGKDRVLKLWM 472
+ +SPDG+ +A+ +D + +++
Sbjct: 1916 TIKHCVYSPDGKYIATVSRDCSIAVYL 1942
Score = 169 (64.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 47/153 (30%), Positives = 77/153 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GHT+ V FSPD ++L SG D +R+W++ TQ + GH + + ++ D K
Sbjct: 1952 LKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQK 2011
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+++S S G ++ WD Q G + L H+ T IS + V + R S+S DG +
Sbjct: 2012 YIISASFDGSVKVWDAQFGSEITS-LR-HQ---TRIS-DVVSSSDASGRIFSSSDDGIIK 2065
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW----GGDG 252
W C+ L+GH+ + V++ GG G
Sbjct: 2066 SWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGG 2098
Score = 160 (61.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 85/370 (22%), Positives = 151/370 (40%)
Query: 107 HTEAVLSVAFSPDGR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H + + ++F+P +L S S D + ++W T + G N + +S DGK++
Sbjct: 1870 HNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYI 1929
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+ S+ + + + K L GH W+ ++ P ++ VS D + R+W
Sbjct: 1930 ATVSRDCSIAVYLCSSKKLLFR-LKGHTDWVNFCTFSP-----DSKKLVSGGWDFNLRVW 1983
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
++ +K ++CL GH+ ++ + D I + S D ++KVW+ G I L+ H +
Sbjct: 1984 NIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLR-HQTRI 2042
Query: 285 NSLALSTEYALRTGAFDHTG--KQYSSPEEMKKAALERYN----KIKGNAPERLVSGSDD 338
+ + S++ + R + G K + A L ++ +++ N P GS
Sbjct: 2043 SDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFN-PNSGGGGSSS 2101
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK-SI-KLWNGTTGKFVA 396
F+ F + S P T V A+ S K SI + GK+VA
Sbjct: 2102 FSSFSSFSSSSDAPVTLSIASSSDDGTVKLWEFNSATATTSAHKGSINQCVFSKDGKYVA 2161
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSK-DSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSP 454
G V I W A + + L +S + R+ L L EV++ DW
Sbjct: 2162 TC-GQ-DCVLNI-WDAKTHINLKTMIFESPVTTCSFNRSGVLFIGLQDGTLEVYSKDWKT 2218
Query: 455 DGEKVASGGK 464
K + GK
Sbjct: 2219 VLHKEKTNGK 2228
Score = 130 (50.8 bits), Expect = 0.00025, P = 0.00025
Identities = 81/376 (21%), Positives = 151/376 (40%)
Query: 96 PV-NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
PV C AT+ GH+ + V F+P+ + G G ++ + F + L
Sbjct: 2069 PVAGSCLATLTGHSGPIKQVQFNPN----SGGGGSSSFSSFS------SFSSSSDAPVTL 2118
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
IA S+D G ++ W+ + + S HK I + + +
Sbjct: 2119 SIASSSDD---------GTVKLWEFNSATAT---TSAHKGSINQCVF-----SKDGKYVA 2161
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKV----WET-- 268
+ +D IWD + + + TC + GV++ G QD T++V W+T
Sbjct: 2162 TCGQDCVLNIWDAKTHINLKTMIFESPVTTC-SFNRSGVLFIGLQDGTLEVYSKDWKTVL 2220
Query: 269 ----TQGKLIRELKGHGHWVNSLALSTEYALRTGAFD---------HTGKQYSSPEEMKK 315
T GK+ R H S +Y + AF + ++Y P
Sbjct: 2221 HKEKTNGKITRS-SAHPSLNIQSTESPDY-IDLFAFSTWTNCVNLLNCSEKYFDPIVSFD 2278
Query: 316 AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+E + + L +GS + ++ P ++ +P T T V + FSP+ +++
Sbjct: 2279 DWVESVEF--STSGDLLAAGSRTKQVKIFSP-LNDKPVTHQTS-SSYVTSLSFSPNDKYL 2334
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
A +FD +++L + +GK + V + + + DS L+S S D +L VW+ T
Sbjct: 2335 AIGTFDGTVELLDIASGKLRRILTTQVSSITSLKF-LDSTRLVSVSNDRSLIVWNFSTSS 2393
Query: 436 LKQDLPGHADEVFAVD 451
++ + H + ++D
Sbjct: 2394 IENEFI-HQSPITSMD 2408
Score = 78 (32.5 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 409 SWSADSRLLLS---GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
S S+D+ + LS S D T+K+W+ + H + +S DG+ VA+ G+D
Sbjct: 2109 SSSSDAPVTLSIASSSDDGTVKLWEFNSATATTS--AHKGSINQCVFSKDGKYVATCGQD 2166
Query: 466 RVLKLW 471
VL +W
Sbjct: 2167 CVLNIW 2172
Score = 43 (20.2 bits), Expect = 8.7e-21, Sum P(2) = 8.7e-21
Identities = 8/27 (29%), Positives = 19/27 (70%)
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
D V +V++S G+ +A+G + + +K++
Sbjct: 2279 DWVESVEFSTSGDLLAAGSRTKQVKIF 2305
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 233 (87.1 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 68/224 (30%), Positives = 105/224 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP--VH---LNA------ 208
DG + S S ++ W T K L H+ + ISW P H L A
Sbjct: 244 QDGTLIASSSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESAHPTILEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCT 262
P +S S+D ++WDVS+ C++ L GH V V GG ++ + + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIV-SCADDKT 361
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+++W+ + + L H H+V SL T + TG+ D T K
Sbjct: 362 LRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 232 (86.7 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 60/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ TG +GH++W+ + P N S+S D
Sbjct: 205 DHIVSASRDKTIKMWEVATGY-CVKTFTGHREWVRMV--RP---NQDGTLIASSSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSIGMCLMTLVGHDNWVRGV 344
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 50/168 (29%), Positives = 86/168 (51%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E + G + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEINIGGPIGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F P + SAS D +IK+W+ TG F +GH V IS+ +LL S S D
Sbjct: 112 TRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSAD 171
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+WD + + + + GH V +V P+G+ + S +D+ +K+W
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 201 (75.8 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 61/204 (29%), Positives = 95/204 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+V+ CV +GH V V+ DG +I + S D T++VW + EL+ H H
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTEYALRTGAFDHTGKQ 306
V ++ + E A T + TG +
Sbjct: 278 VVECISWAPESAHPT-ILEATGSE 300
Score = 199 (75.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
TG F+ T K ++ + ++ + + K+ L S S D T+ LW+ + +T M
Sbjct: 139 TGDFERTLKGHT--DSVQDISFDHTGKL-------LASCSADMTIKLWDFQGFECIRT-M 188
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH V+ V P+G + SAS DK+IK+W TG V F GH V + + D L
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ S S D T++VW + T++ K +L H V + W+P+
Sbjct: 249 IASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S+D T+ +W+ +T + GH V + F G+ +AS S D +IKLW+
Sbjct: 123 IVSASEDATIKVWDHETGDFERT-LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQG 181
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH V ++ + ++S S+D T+K+W++ T + GH + V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 452 WSPDGEKVASGGKDRVLKLWM 472
+ DG +AS D+ +++W+
Sbjct: 242 PNQDGTLIASSSNDQTVRVWV 262
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 56/223 (25%), Positives = 96/223 (43%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL 273
VSAS+D ++W+V+ CV +GH V V+ DG + S + +
Sbjct: 208 VSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSN----------DQT 257
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYN---KIKGNAP 329
+R WV + E +H + S +PE LE K G
Sbjct: 258 VRV------WV---VATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPG 308
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
L+SGS D T+ +W+ ++ T + GH V V P G+++ S + DK++++W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSIGMCLMT-LVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ H V + + + +++GS D T+KVW+ R
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 159 (61.0 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVIVSASEDATIKVWDHETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLV-SGSDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L+ S S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPD 371
K+ K + H+ +V + ++P+
Sbjct: 266 KECKAELREHEHVVECISWAPE 287
Score = 157 (60.3 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HTG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L + + D T + + + KA L
Sbjct: 215 TIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 134 (52.2 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 27/100 (27%), Positives = 52/100 (52%)
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
G ++ S S DK+IK+W+ + G + GH V + + ++S + D TL++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 432 RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ ++ + L H V ++D+ V +G D+ +K+W
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 269 (99.8 bits), Expect = 7.5e-23, P = 7.5e-23
Identities = 85/305 (27%), Positives = 150/305 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGP----VYQI 408
GH V + S +G ++ S + D ++++W+ + V +F+G+V + +
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 409 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
SWS D + +GS D + VWD ++++ LPGHA + V + PD + S D+
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDK-- 350
Query: 469 KLWMG 473
+L+MG
Sbjct: 351 RLYMG 355
Score = 267 (99.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 89/320 (27%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K + +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAVQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRVLYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 234 (87.4 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 74/262 (28%), Positives = 119/262 (45%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL--IRELKGHGHWV 284
SL+ ++ LSGH V C K+ +G + + D I +W G LKGH V
Sbjct: 55 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV 113
Query: 285 NSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PERLVSGSD 337
L +T+ + L + + D T + S + L+ + + P+ + +GSD
Sbjct: 114 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 173
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ LW+ +T +Q L V F+ + S D IK+W+ K
Sbjct: 174 DGTVKLWDIRKKAAVQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 231
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPG--HADE--VFA 449
RGH V +S S++ LLS + D+T++VWD+R ++ + G H E +
Sbjct: 232 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
WSPDG K+A+G DR + +W
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVW 313
Score = 204 (76.9 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 71/308 (23%), Positives = 140/308 (45%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 57 QAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 112
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 113 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 171
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + ++ + + + V ++ + T + +G D+ K + +
Sbjct: 172 SDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+SPDG +A+ S D+ + +W+ T+ + + GH G + ++++ D ++LS S D
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Query: 425 TLKVWDIR 432
L + +I+
Sbjct: 351 RLYMGEIQ 358
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 290 (107.1 bits), Expect = 9.2e-23, P = 9.2e-23
Identities = 99/358 (27%), Positives = 158/358 (44%)
Query: 99 RCSA-TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
RCS T GHT V+ + F + LA+GS DTT+++WD T + GH++ + C+
Sbjct: 339 RCSIKTFKGHTNGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQ 396
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ D L+SGS ++ W+ +TG+ +GH+ + G+ H +A S S
Sbjct: 397 F--DDTKLISGSMDRTIKVWNWRTGECIST-YTGHRGGVIGL-----HFDASI--LASGS 446
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
D +IW+ K L GHT V V+ +++ S DCT+++W+ IR
Sbjct: 447 VDKTVKIWNFE-DKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRT 505
Query: 277 LKGH-GHWVNSLALSTEYALR-------TGAFDHTGKQYSSPEEMKKAALE---RYNKIK 325
GH G + L E+ T P LE Y++
Sbjct: 506 FHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSS 565
Query: 326 --------GNA--PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
G A P +V+ + D T+ LWE + +T GH + V + D +
Sbjct: 566 AFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCLRT-FFGHLEGVWAL--GADTLRI 622
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT 433
S + D+ IK+W+ TGK F GH GPV I DSR +GS+D ++++ ++
Sbjct: 623 VSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGLG-DSRFA-TGSEDCEVRMYSFQS 678
Score = 195 (73.7 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L +GS D T+ +W+ ++ +T + GH+ + + F D + S S D++IK+WN T
Sbjct: 362 LATGSYDTTIKIWDTETGEELRT-LRGHESGIRCLQF--DDTKLISGSMDRTIKVWNWRT 418
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
G+ ++ + GH G V + + D+ +L SGS D T+K+W+ K L GH D V AV
Sbjct: 419 GECISTYTGHRGGVIGLHF--DASILASGSVDKTVKIWNFE-DKSTFSLRGHTDWVNAVR 475
Query: 452 WSPDGEKVASGGKDRVLKLW 471
V S D ++LW
Sbjct: 476 VDTSSRTVFSASDDCTVRLW 495
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/177 (30%), Positives = 85/177 (48%)
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSP--EEMKKA-ALERYNKIKGNAPE 330
I+ KGH + V L + L TG++D T K + + EE++ E +
Sbjct: 342 IKTFKGHTNGVMCLQFE-DNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDT 400
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
+L+SGS D T+ +W + T TGH+ V ++F D +AS S DK++K+WN
Sbjct: 401 KLISGSMDRTIKVWNWRTGECIST-YTGHRGGVIGLHF--DASILASGSVDKTVKIWN-F 456
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
K RGH V + SR + S S D T+++WD+ T+ + GH +V
Sbjct: 457 EDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQV 513
Score = 168 (64.2 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
++ + ++ GHT+ V +V R + S S D TVRLWDL+T+T + GH V +
Sbjct: 458 DKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVV 517
Query: 158 ----------WSADGKHLVSGSKAGELQCWDPQTGKPS-G-NPLSGHKKWIT-GISWEPV 204
A+ ++ + +G+ DP + + S G P + + + G S++
Sbjct: 518 PLPREFEFEEHDAECENDDLSTTSGDA---DPPSIQASMGLEPNAAYSQSSAFGTSFDNG 574
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTI 263
AP R V+++ D R+W+ + +C+ GH V + G D + I +G++D I
Sbjct: 575 RA-APPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWAL--GADTLRIVSGAEDRMI 631
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
K+W+ GK R GH V + L + TG+ D + YS
Sbjct: 632 KIWDPRTGKCERTFTGHSGPVTCIGLG-DSRFATGSEDCEVRMYS 675
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 28/99 (28%), Positives = 59/99 (59%)
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+++ +++ D +I+LW TTG+ + F GH+ V+ + AD+ ++SG++D +K+WD R
Sbjct: 580 RYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALG--ADTLRIVSGAEDRMIKIWDPR 637
Query: 433 TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T K ++ GH+ V + + A+G +D ++++
Sbjct: 638 TGKCERTFTGHSGPVTCIGLGDS--RFATGSEDCEVRMY 674
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 284 (105.0 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 88/289 (30%), Positives = 139/289 (48%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK IT + P N ++ +AS D +W+ GH VT V++
Sbjct: 16 GHKAAITSLDLSP---NG--KQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP 70
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ + S+D T+++W +GK E K H V S+ S + L T + D + K +
Sbjct: 71 HGNLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 308 SSPEEMKKAALERYN---KIKGNAPE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
S + +L R+ + +P+ RL VS S+D T+ +W+ +KQ +
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TTNKQCVNNFSDSVGF 188
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
N V F+P G +ASA D+++K+W+ K + ++ H G V IS+ L++ S
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASS 248
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D TLK+ D+ +L L GH VF V +S GE ASGG D + LW
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 245 (91.3 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 79/293 (26%), Positives = 132/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S+ SP+G+QLA+ S DT + LW+ ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + +AS+D ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKFS--EFKAHTAPVRSVDF-----SADGQFLATASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N + + + + D T K + + K L+ Y G P LV+
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDV--RVNKL-LQHYQVHSGGVNCISFHPSDNYLVT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ AS D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH + + S + + L + S D+ L +W+ + GH D V +V +SP G
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 458 KVASGGKDRVLKLWM 472
+AS +DR ++LW+
Sbjct: 74 LLASASRDRTVRLWI 88
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 285 (105.4 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 88/289 (30%), Positives = 139/289 (48%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK IT + P N ++ +AS D +W+ GH VT V++
Sbjct: 16 GHKAAITSLDLSP---NG--KQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP 70
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ + S+D T+++W +GK E K H V S+ S + L T + D + K +
Sbjct: 71 HGNLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 308 SSPEEMKKAALERYN---KIKGNAPE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
S + +L R+ + +P+ RL VS S+D T+ +W+ +KQ +
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TTNKQCVNNFSDSVGF 188
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
N V F+P G +ASA D+++K+W+ K + ++ H G V IS+ L++ S
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASS 248
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D TLK+ D+ +L L GH VF V +S GE ASGG D + LW
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 244 (91.0 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 78/293 (26%), Positives = 132/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S+ SP+G+QLA+ S DT + LW+ ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + +AS+D ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKFS--EFKAHTAPVRSVDF-----SADGQFLATASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N + + + + D T K + + K L+ Y G P L++
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDV--RVNKL-LQHYQVHSGGVNCISFHPSGNYLIT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ AS D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 121 (47.7 bits), Expect = 0.00032, P = 0.00032
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH + + S + + L + S D+ L +W+ + GH D V +V +SP G
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 458 KVASGGKDRVLKLWM 472
+AS +DR ++LW+
Sbjct: 74 LLASASRDRTVRLWI 88
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 283 (104.7 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 107/377 (28%), Positives = 176/377 (46%)
Query: 39 SQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVN 98
SQ++ K + +K+ A +S L G H+++ E S+V + A +IRP
Sbjct: 93 SQVITKFSDPNKKI--AGQVSMQSLEKIKGVPEAAHRIAGESQASLVKRTLAE-QIRPEW 149
Query: 99 RCSAT----IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
T I+GH V V P + +G+GD T+++WDL + TGH V
Sbjct: 150 HAPWTLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVR 209
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+A S +L S + ++CWD +T K + GH + + P L+ V
Sbjct: 210 GLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRH-YHGHLSGVYALKLHPT-LDV----LV 263
Query: 215 SASKDGDARIWDVSLRKCVICLSGH--TLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+A +D AR+WD+ R+ V LSGH T+A V+ D + TGS D TI++W+ GK
Sbjct: 264 TAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQ-EFDPQVVTGSMDSTIRLWDLAAGK 322
Query: 273 LIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----N 327
+ L H V +L+L E+ +G+ D+ K + PE E +N I N
Sbjct: 323 TLTTLTHHKKTVRALSLHPDEFTFASGSSDNI-KHWKFPEGAFMGNFEGHNAIVNTLSIN 381
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGH--QQLVNHVY-FSPDGQ-WVASASFDKS 383
+ + SG+D+ +M W+ +GH Q+L + V S D + + ++SFDK+
Sbjct: 382 SDNVMFSGADNGSMCFWD---------WKSGHKYQELQSVVQPGSLDSEAGIFASSFDKT 432
Query: 384 -IKLWNGTTGKFVAVFR 399
++L K V +++
Sbjct: 433 GLRLITCEADKSVKIYK 449
Score = 216 (81.1 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 76/298 (25%), Positives = 135/298 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ + EP + + F + + D +IWD++ + L+GH V +
Sbjct: 159 ISGHLGWVRCVDVEPGN-----QWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAV 213
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V +L L T L T D +
Sbjct: 214 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARV 273
Query: 307 YSSPEEMKKAALERYNK-IKGNAPE----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ L + + A + ++V+GS D T+ LW+ A K T +T H++
Sbjct: 274 WDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKT-LTTLTHHKK 332
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V + PD AS S D +IK W G F+ F GH V +S ++D+ ++ SG+
Sbjct: 333 TVRALSLHPDEFTFASGSSD-NIKHWKFPEGAFMGNFEGHNAIVNTLSINSDN-VMFSGA 390
Query: 422 KDSTLKVWDIRTQKLKQDL-----PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ ++ WD ++ Q+L PG D +FA + G ++ + D+ +K++
Sbjct: 391 DNGSMCFWDWKSGHKYQELQSVVQPGSLDSEAGIFASSFDKTGLRLITCEADKSVKIY 448
Score = 168 (64.2 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 46/178 (25%), Positives = 83/178 (46%)
Query: 306 QYSSPEEM--KKAALERYNKIKGNAPERL--VSGSDDFTMFLWEPAVSKQPK-----TRM 356
++S P + + +++ KIKG PE ++G ++ A +P+ T M
Sbjct: 98 KFSDPNKKIAGQVSMQSLEKIKG-VPEAAHRIAGESQASLVKRTLAEQIRPEWHAPWTLM 156
Query: 357 ---TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD 413
+GH V V P QW + + D++IK+W+ +G GH+ V ++ S
Sbjct: 157 RVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPR 216
Query: 414 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L S +D +K WD+ T K+ + GH V+A+ P + + + G+D V ++W
Sbjct: 217 HPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVW 274
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 283 (104.7 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 85/293 (29%), Positives = 137/293 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ SV FSP+G+QLA+GS DT + LW L Q F+ GHK+ + + +S G L
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + SAS+D ++
Sbjct: 76 ASASRDRTIRLWIPDKRGKSS--EFKAHTAPVRSVDF-----SADGQFLASASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W++ ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N +A + + + DHT K + + K L+ Y G P L++
Sbjct: 189 ANFVAFNPNGTCIASAGSDHTVKIWDI--RVNKL-LQHYQVHSGGVNCVSFHPSGNYLIT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ S D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 270 (100.1 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 83/289 (28%), Positives = 139/289 (48%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK IT + + P N ++ + S D +W + + GH +T V++
Sbjct: 16 GHKAAITSVDFSP---NG--KQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSP 70
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ + S+D TI++W +GK E K H V S+ S + L + + D + K +
Sbjct: 71 LGNLLASASRDRTIRLWIPDKRGKS-SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW 129
Query: 308 SSPEEMKKAALERYN---KIKGNAPE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ + +L R+ + +P+ RL VS S+D T+ +W+ +KQ +
Sbjct: 130 NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TTNKQCVNNFSDFVGF 188
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
N V F+P+G +ASA D ++K+W+ K + ++ H G V +S+ L++ S
Sbjct: 189 ANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASS 248
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D TLK+ D+ +L L GH VF V +S GE SGG D + LW
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 250 (93.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 59/181 (32%), Positives = 93/181 (51%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ LAS S D ++++W++ Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + +++ P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDFVGFANFVAFNP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+IWD+ + K + H+ V CV + G + T S D T+K+ + +G+LI L+G
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 280 H 280
H
Sbjct: 269 H 269
Score = 237 (88.5 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 62/177 (35%), Positives = 96/177 (54%)
Query: 308 SSPEEMKKAALERYNKIKGN---------AP--ERLVSGSDDFTMFLWEPAVSKQPKT-R 355
SSPE+ LERY KG+ +P ++L +GS D + LW ++ Q + R
Sbjct: 3 SSPED---PVLERY--FKGHKAAITSVDFSPNGKQLATGSWDTFLMLW--SLRPQARAFR 55
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQISWSADS 414
GH+ ++ V FSP G +ASAS D++I+LW GK + F+ H PV + +SAD
Sbjct: 56 YVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKS-SEFKAHTAPVRSVDFSADG 114
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ L S S+D ++KVW++ Q+ L H V +SPDG + S +D+ +K+W
Sbjct: 115 QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Score = 218 (81.8 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 71/209 (33%), Positives = 104/209 (49%)
Query: 273 LIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---A 328
L R KGH + S+ S L TG++D +S + + + + + +
Sbjct: 10 LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69
Query: 329 P--ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
P L S S D T+ LW P K+ K+ H V V FS DGQ++ASAS DKSIK
Sbjct: 70 PLGNLLASASRDRTIRLWIP--DKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIK 127
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD 445
+WN +F+ H V +S D RL++S S+D T+K+WD KQ + +D
Sbjct: 128 VWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN---KQCVNNFSD 184
Query: 446 EV-FA--VDWSPDGEKVASGGKDRVLKLW 471
V FA V ++P+G +AS G D +K+W
Sbjct: 185 FVGFANFVAFNPNGTCIASAGSDHTVKIW 213
Score = 135 (52.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH + + +S + + L +GS D+ L +W +R Q GH D + +V +SP G
Sbjct: 14 FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGN 73
Query: 458 KVASGGKDRVLKLWM 472
+AS +DR ++LW+
Sbjct: 74 LLASASRDRTIRLWI 88
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 265 (98.3 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFD 301
VN + EY L +G+ D
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSD 210
Score = 221 (82.9 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 62/199 (31%), Positives = 102/199 (51%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
++E+ H V+SL L ++ L TG D +S + +L + ++ N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D +IKL
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ V +RGH V + +S D + L S + D T+K+WD+ K+ + PGH
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 447 VFAVDWSPDGEKVASGGKD 465
V V++ P+ +ASG D
Sbjct: 192 VNVVEFHPNEYLLASGSSD 210
Score = 190 (71.9 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 46/151 (30%), Positives = 76/151 (50%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASF 380
+ G A RL++ G DD + LW +++K P M TGH V V + + + + S
Sbjct: 27 VLGKASGRLLATGGDDCRVNLW--SINK-PNCIMSLTGHTSPVESVRLNTPEELIVAGSQ 83
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
SI++W+ K + GH + + + + SGS+D+ +K+WDIR +
Sbjct: 84 SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY 143
Query: 441 PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH+ V + +SPDG+ +AS D +KLW
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Score = 171 (65.3 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 37/129 (28%), Positives = 66/129 (51%)
Query: 346 PAVSKQP-KTR-MTGHQQLVNHVYFSP-DGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
P V+K K + + H V+ + G+ +A+ D + LW+ + GH
Sbjct: 4 PVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHT 63
Query: 403 GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 462
PV + + L+++GS+ +++VWD+ K+ + L GH + ++D+ P GE VASG
Sbjct: 64 SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASG 123
Query: 463 GKDRVLKLW 471
+D +KLW
Sbjct: 124 SQDTNIKLW 132
Score = 165 (63.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
K L S + ++ WD GK GH + + + P
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHP 199
Score = 123 (48.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGS 169
+ L SGS
Sbjct: 199 PNEYLLASGS 208
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 284 (105.0 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 81/248 (32%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P L+ V+ S+D AR
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-LDV----LVTCSRDSTAR 312
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 313 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 372
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I NA LVSG+D
Sbjct: 373 SVRAVVLHPLLYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNADGVLVSGAD 431
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 432 NGTMHLWD 439
Score = 235 (87.8 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 80/298 (26%), Positives = 141/298 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 199 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARI 313
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 372
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V V P AS S D +IK W G F+ GH + ++ +AD +L+SG+
Sbjct: 373 SVRAVVLHPLLYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNADG-VLVSGA 430
Query: 422 KDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ T+ +WD RT Q++ + PG D +FA + ++ + D+ +K++
Sbjct: 431 DNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 488
Score = 192 (72.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 78/324 (24%), Positives = 139/324 (42%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 200 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VST 255
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 256 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARI 313
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 373
Query: 324 IKGNAPERLV----SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
++ L+ SGS D + W+ + ++GH ++N + + DG V+ A
Sbjct: 374 VRAVVLHPLLYTFASGSPD-NIKQWKFPDGGFIQN-LSGHNAIINTLAVNADGVLVSGAD 431
Query: 380 FDKSIKLWNGTTG-KF----VAVFRGHVGP---VYQISWSADSRLLLSGSKDSTLKVWDI 431
+ ++ LW+ TG F AV G + ++ ++ LL+ D T+KV+
Sbjct: 432 -NGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY-- 488
Query: 432 RTQKLKQDLPGHADEVFAVDWSPD 455
++D +E V W P+
Sbjct: 489 -----REDETA-TEETHPVSWKPE 506
Score = 181 (68.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 55/215 (25%), Positives = 94/215 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 285 GHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 344
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P+ F S S D + + W
Sbjct: 345 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPLLYT-----FASGSPD-NIKQW 397
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 398 KFPDGGFIQNLSGHNAIINTLAVNADGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 454
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+L +E + AFD + + + E K + R
Sbjct: 455 PGSLDSESGIFACAFDRSESRLLTAEADKTIKVYR 489
Score = 173 (66.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 58/204 (28%), Positives = 91/204 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 240 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTL 299
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 300 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 353
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT---GSQDCTIKVWETTQGKLIRELKG 279
R+WD+ K + L+ H +V V ++YT GS D IK W+ G I+ L G
Sbjct: 354 RLWDLVAGKTRVTLTNHKKSVRAVVL--HPLLYTFASGSPD-NIKQWKFPDGGFIQNLSG 410
Query: 280 HGHWVNSLALSTEYALRTGAFDHT 303
H +N+LA++ + L +GA + T
Sbjct: 411 HNAIINTLAVNADGVLVSGADNGT 434
Score = 169 (64.5 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 48/182 (26%), Positives = 77/182 (42%)
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIK--GNAPERLVSGSDDFTMFL--WEPAVS 349
A RTG G +Y P ++ N I GN + TM W P
Sbjct: 138 ANRTGP---AGSEYRHPGASDRSQPTAMNSIMETGNTKNSALMAKKAPTMPKPQWHPPW- 193
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
K + ++GH V + P QW + S D++IK+W+ +GK GH+ V +
Sbjct: 194 KLYRV-ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 252
Query: 410 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 469
S S L S +D +K WD+ K+ + GH V+ +D P + + + +D +
Sbjct: 253 VSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTAR 312
Query: 470 LW 471
+W
Sbjct: 313 IW 314
Score = 155 (59.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKG--- 326
KL R + GH WV +A+ TG+ D T K + K +L + + ++G
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+P L S +D + W+ +K + GH V + P + + S D +
Sbjct: 254 STRSPY-LFSCGEDKQVKCWDLEYNKVIR-HYHGHLSAVYGLDLHPTLDVLVTCSRDSTA 311
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
++W+ T V GH V + A +++GS D+T+++WD+ K + L H
Sbjct: 312 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 371
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V AV P ASG D + K W
Sbjct: 372 KSVRAVVLHPLLYTFASGSPDNI-KQW 397
Score = 38 (18.4 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 284 (105.0 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 79/248 (31%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 312
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 313 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 372
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 373 SVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 431
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 432 NGTMHLWD 439
Score = 239 (89.2 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 79/298 (26%), Positives = 141/298 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 199 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 313
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 372
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V V P AS S D +IK W G F+ GH + ++ ++D +L+SG+
Sbjct: 373 SVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDG-VLVSGA 430
Query: 422 KDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ T+ +WD RT Q++ + PG D +FA + ++ + D+ +K++
Sbjct: 431 DNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 488
Score = 197 (74.4 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 81/325 (24%), Positives = 139/325 (42%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 200 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VST 255
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 256 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 313
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 373
Query: 324 IKGNA--PER--LVSGSDDFTMFLWE-PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
++ P SGS D + W+ P S ++GH ++N + + DG V+ A
Sbjct: 374 VRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQN--LSGHNAIINTLTVNSDGVLVSGA 430
Query: 379 SFDKSIKLWNGTTG-KF----VAVFRGHVGP---VYQISWSADSRLLLSGSKDSTLKVWD 430
+ ++ LW+ TG F AV G + ++ ++ LL+ D T+KV+
Sbjct: 431 D-NGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY- 488
Query: 431 IRTQKLKQDLPGHADEVFAVDWSPD 455
K+D +E V W P+
Sbjct: 489 ------KEDDTA-TEETHPVSWKPE 506
Score = 189 (71.6 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 285 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 344
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 345 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYT-----FASGSPD-NIKQW 397
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 398 KFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 454
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + AFD + + + E K
Sbjct: 455 PGSLDSESGIFACAFDQSESRLLTAEADK 483
Score = 169 (64.5 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 240 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 299
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 300 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 353
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 354 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHN 412
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 413 AIINTLTVNSDGVLVSGADNGT 434
Score = 159 (61.0 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKG--- 326
KL R + GH WV +A+ TG+ D T K + K +L + + ++G
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+P L S +D + W+ +K + GH V + P + + S D +
Sbjct: 254 STRSPY-LFSCGEDKQVKCWDLEYNKVIR-HYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 311
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
++W+ T V GH V + A +++GS D+T+++WD+ K + L H
Sbjct: 312 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 371
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V AV P ASG D + K W
Sbjct: 372 KSVRAVVLHPRHYTFASGSPDNI-KQW 397
Score = 123 (48.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 324 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 383
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 384 YTFASGSP-DNIKQWKFPDGSFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 435
Query: 223 RIWD 226
+WD
Sbjct: 436 HLWD 439
Score = 38 (18.4 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 284 (105.0 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 79/248 (31%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 313
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 314 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 373
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 374 SVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 432
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 433 NGTMHLWD 440
Score = 239 (89.2 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 79/298 (26%), Positives = 141/298 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 200 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 255 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 373
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V V P AS S D +IK W G F+ GH + ++ ++D +L+SG+
Sbjct: 374 SVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDG-VLVSGA 431
Query: 422 KDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ T+ +WD RT Q++ + PG D +FA + ++ + D+ +K++
Sbjct: 432 DNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 489
Score = 194 (73.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 80/325 (24%), Positives = 139/325 (42%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 201 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VST 256
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 257 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 374
Query: 324 IKGNA--PER--LVSGSDDFTMFLWE-PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
++ P SGS D + W+ P S ++GH ++N + + DG V+ A
Sbjct: 375 VRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQN--LSGHNAIINTLTVNSDGVLVSGA 431
Query: 379 SFDKSIKLWNGTTG-KF----VAVFRGHVGP---VYQISWSADSRLLLSGSKDSTLKVWD 430
+ ++ LW+ TG F AV G + ++ ++ LL+ D T+KV+
Sbjct: 432 D-NGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY- 489
Query: 431 IRTQKLKQDLPGHADEVFAVDWSPD 455
++D +E V W P+
Sbjct: 490 ------REDDTA-TEETHPVSWKPE 507
Score = 190 (71.9 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 56/215 (26%), Positives = 94/215 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 286 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 345
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYT-----FASGSPD-NIKQW 398
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 399 KFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 455
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+L +E + AFD + + + E K + R
Sbjct: 456 PGSLDSESGIFACAFDQSESRLLTAEADKTIKVYR 490
Score = 169 (64.5 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 241 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 300
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 301 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 354
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 355 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHN 413
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 414 AIINTLTVNSDGVLVSGADNGT 435
Score = 159 (61.0 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKG--- 326
KL R + GH WV +A+ TG+ D T K + K +L + + ++G
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+P L S +D + W+ +K + GH V + P + + S D +
Sbjct: 255 STRSPY-LFSCGEDKQVKCWDLEYNKVIR-HYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 312
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
++W+ T V GH V + A +++GS D+T+++WD+ K + L H
Sbjct: 313 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 372
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V AV P ASG D + K W
Sbjct: 373 KSVRAVVLHPRHYTFASGSPDNI-KQW 398
Score = 123 (48.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 325 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 384
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 385 YTFASGSP-DNIKQWKFPDGSFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 436
Query: 223 RIWD 226
+WD
Sbjct: 437 HLWD 440
Score = 38 (18.4 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 284 (105.0 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 79/248 (31%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 261 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 314
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 315 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 374
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 375 SVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 433
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 434 NGTMHLWD 441
Score = 239 (89.2 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 79/298 (26%), Positives = 141/298 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 201 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 255
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 256 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 315
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 316 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 374
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V V P AS S D +IK W G F+ GH + ++ ++D +L+SG+
Sbjct: 375 SVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDG-VLVSGA 432
Query: 422 KDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ T+ +WD RT Q++ + PG D +FA + ++ + D+ +K++
Sbjct: 433 DNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 490
Score = 202 (76.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 88/368 (23%), Positives = 155/368 (42%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAWSADGK 163
AG T AV+ + + +A + W + +++ +GH WV CIA +
Sbjct: 161 AGMTSAVMEAGNAKNSALMAKKAPTMPKPQW--HPPWKLYRVISGHLGWVRCIAVEPGNQ 218
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
V+GS ++ WD +GK + L+GH + G+ V +P S +D +
Sbjct: 219 WFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VSTRSPY--LFSCGEDKQVK 272
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
WD+ K + GH AV + V+ T S+D T ++W+ + L GH +
Sbjct: 273 CWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTN 332
Query: 283 WVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA--PER--LVSGS 336
V ++ + E + TG+ D T + + + L + K ++ P SGS
Sbjct: 333 AVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGS 392
Query: 337 DDFTMFLWE-PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG-KF 394
D + W+ P S ++GH ++N + + DG V+ A + ++ LW+ TG F
Sbjct: 393 PD-NIKQWKFPDGSFIQN--LSGHNAIINTLTVNSDGVLVSGAD-NGTMHLWDWRTGYNF 448
Query: 395 ----VAVFRGHVGP---VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
AV G + ++ ++ LL+ D T+KV+ K+D +E
Sbjct: 449 QRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY-------KEDDTA-TEET 500
Query: 448 FAVDWSPD 455
V W P+
Sbjct: 501 HPVSWKPE 508
Score = 174 (66.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 48/177 (27%), Positives = 76/177 (42%)
Query: 298 GAFDHTG-KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL--WEPAVSKQPKT 354
G + H G S P M A +E GNA + TM W P K +
Sbjct: 147 GEYRHPGTSDRSQPAGMTSAVMEA-----GNAKNSALMAKKAPTMPKPQWHPPW-KLYRV 200
Query: 355 RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADS 414
++GH V + P QW + S D++IK+W+ +GK GH+ V + S S
Sbjct: 201 -ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 259
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L S +D +K WD+ K+ + GH V+ +D P + + + +D ++W
Sbjct: 260 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIW 316
Score = 169 (64.5 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 242 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 301
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 302 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 355
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 356 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHN 414
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 415 AIINTLTVNSDGVLVSGADNGT 436
Score = 159 (61.0 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKG--- 326
KL R + GH WV +A+ TG+ D T K + K +L + + ++G
Sbjct: 196 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 255
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+P L S +D + W+ +K + GH V + P + + S D +
Sbjct: 256 STRSPY-LFSCGEDKQVKCWDLEYNKVIR-HYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 313
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
++W+ T V GH V + A +++GS D+T+++WD+ K + L H
Sbjct: 314 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 373
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V AV P ASG D + K W
Sbjct: 374 KSVRAVVLHPRHYTFASGSPDNI-KQW 399
Score = 123 (48.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 326 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 385
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 386 YTFASGSP-DNIKQWKFPDGSFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 437
Query: 223 RIWD 226
+WD
Sbjct: 438 HLWD 441
Score = 38 (18.4 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 286 (105.7 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 76/252 (30%), Positives = 122/252 (48%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W ++ + TGH + V CI +++
Sbjct: 16 IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +V+GS +G L+ WD + K L GHK I+ + + P+ S S D +
Sbjct: 76 ERVVAGSLSGSLRLWDLEAAKIL-RTLMGHKASISSLDFHPMG-----EYLASGSVDSNI 129
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WDV + CV GHT AV C+ + DG + + S D T+K+W+ GK+I E H
Sbjct: 130 KLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHT 189
Query: 282 HWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA---PER--LVSG 335
VN + EY L +G+ D T K + + + E + + P+ L SG
Sbjct: 190 SAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSG 249
Query: 336 SDD-FTMFLWEP 346
S++ ++ WEP
Sbjct: 250 SENTLRVYGWEP 261
Score = 258 (95.9 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 69/239 (28%), Positives = 114/239 (47%)
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-ST 291
++ S + ++ K G ++ TG +DC + +W ++ I L GH V + S+
Sbjct: 16 IVAHSSNVSSLVLGKSSGR-LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSS 74
Query: 292 EYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--P--ERLVSGSDDFTMFLWEP 346
E + G+ + + + ++ + + I P E L SGS D + LW+
Sbjct: 75 EERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV 134
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
K R GH Q V + FSPDG+W+ASAS D ++KLW+ GK + F H V
Sbjct: 135 R-RKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVN 193
Query: 407 QISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
+ + + LL SGS D T+K+WD+ + G V +V ++PDG + SG ++
Sbjct: 194 VVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN 252
Score = 249 (92.7 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 69/230 (30%), Positives = 113/230 (49%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + +D IW VS C++ L+GHT AV C+++ + + GS ++++W+
Sbjct: 34 RLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH ++SL EY L +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKASISSLDFHPMGEY-LASGSVDSNIKLW---DVRRKGCVFRYKGHTQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S SDD T+ LW+ K T T H VN V F P+ +AS S
Sbjct: 150 VRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI-TEFTSHTSAVNVVQFHPNEYLLASGS 208
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
D+++KLW+ + G G V + ++ D L SGS ++TL+V+
Sbjct: 209 ADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY 257
Score = 242 (90.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 67/210 (31%), Positives = 109/210 (51%)
Query: 269 TQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG 326
T KL +E+ H V+SL L S+ L TG D ++ + +L + G
Sbjct: 9 TSWKL-QEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVG 67
Query: 327 -----NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
++ ER+V+GS ++ LW+ +K +T M GH+ ++ + F P G+++AS S D
Sbjct: 68 CIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLM-GHKASISSLDFHPMGEYLASGSVD 126
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
+IKLW+ V ++GH V +++S D + L S S DST+K+WD+ K+ +
Sbjct: 127 SNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFT 186
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V V + P+ +ASG DR +KLW
Sbjct: 187 SHTSAVNVVQFHPNEYLLASGSADRTVKLW 216
Score = 220 (82.5 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/204 (29%), Positives = 99/204 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH ++ S+ F P G LASGS D+ ++LWD+ + +F+ GH V C+A+S DG
Sbjct: 100 TLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S S ++ WD GK + H + + + P S S D
Sbjct: 160 KWLASASDDSTVKLWDLIAGKMI-TEFTSHTSAVNVVQFHPNEY-----LLASGSADRTV 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKV--WETTQGKLIRELKG 279
++WD+ + G T V V + DG +Y+GS++ T++V WE + + + G
Sbjct: 214 KLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVYGWEPDRCFDVVHV-G 271
Query: 280 HGHWVNSLALSTEYALRTGAFDHT 303
G V+ LA+S + ++ HT
Sbjct: 272 WGK-VSDLAISNNQMIAV-SYSHT 293
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 52/209 (24%), Positives = 100/209 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C ++ GHT AV + F+ ++ +GS ++RLWDL + GHK + + +
Sbjct: 55 CIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFH 114
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
G++L SGS ++ WD + K GH + + +++ P + SAS D
Sbjct: 115 PMGEYLASGSVDSNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSP-----DGKWLASASDD 168
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELK 278
++WD+ K + + HT AV V++ + ++ +GS D T+K+W+ + +I +
Sbjct: 169 STVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSE 228
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQY 307
G V S+ + + + ++T + Y
Sbjct: 229 GETGVVRSVLFNPDGSCLYSGSENTLRVY 257
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 41/113 (36%), Positives = 57/113 (50%)
Query: 66 PLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLAS 125
P+G YL V L V + VFR + GHT+AV +AFSPDG+ LAS
Sbjct: 115 PMGEYLASGSVDSNIKLWDVRRKGCVFRYK----------GHTQAVRCLAFSPDGKWLAS 164
Query: 126 GSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
S D+TV+LWDL + + T H + V + + + L SGS ++ WD
Sbjct: 165 ASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWD 217
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 281 (104.0 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 79/248 (31%), Positives = 119/248 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 313
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 314 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 373
Query: 283 WVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N LVSG+D
Sbjct: 374 SVRAVVLHPLHYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGAD 432
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 433 NGTMHLWD 440
Score = 233 (87.1 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 79/298 (26%), Positives = 140/298 (46%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 200 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 255 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 373
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V V P AS S D +IK W G F+ GH + ++ + D +L+SG+
Sbjct: 374 SVRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNTDG-VLVSGA 431
Query: 422 KDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ T+ +WD RT Q++ + PG D +FA + ++ + D+ +K++
Sbjct: 432 DNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 489
Score = 191 (72.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 78/324 (24%), Positives = 138/324 (42%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + V+GS ++ WD +GK + L+GH + G+ V
Sbjct: 201 SGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVI---VST 256
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T ++
Sbjct: 257 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V ++ + E + TG+ D T + + + L + K
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKS 374
Query: 324 IKGNAPERL----VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
++ L SGS D + W+ + ++GH ++N + + DG V+ A
Sbjct: 375 VRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQN-LSGHNAIINTLAVNTDGVLVSGAD 432
Query: 380 FDKSIKLWNGTTG-KF----VAVFRGHVGP---VYQISWSADSRLLLSGSKDSTLKVWDI 431
+ ++ LW+ TG F AV G + ++ ++ LL+ D T+KV+
Sbjct: 433 -NGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY-- 489
Query: 432 RTQKLKQDLPGHADEVFAVDWSPD 455
++D +E V W P+
Sbjct: 490 -----REDETA-TEETHPVSWKPE 507
Score = 190 (71.9 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 56/215 (26%), Positives = 95/215 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 286 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 345
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P+H F S S D + + W
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPLHYT-----FASGSPD-NIKQW 398
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 399 KFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 455
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+L +E + AFD + + + E K + R
Sbjct: 456 PGSLDSESGIFACAFDRSESRLLTAEADKTIKVYR 490
Score = 173 (66.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 57/202 (28%), Positives = 90/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 241 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 300
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 301 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 354
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 355 RLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQNLSGHN 413
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+LA++T+ L +GA + T
Sbjct: 414 AIINTLAVNTDGVLVSGADNGT 435
Score = 165 (63.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 44/173 (25%), Positives = 74/173 (42%)
Query: 300 FDHTG-KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ H G S P M +E N K +A + + W P K + ++G
Sbjct: 148 YRHPGASDRSQPTAMNSMIMETSNT-KNSA--LMAKKAPTMPKPQWHPPW-KLYRV-ISG 202
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLL 418
H V + P QW + S D++IK+W+ +GK GH+ V + S S L
Sbjct: 203 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 262
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S +D +K WD+ K+ + GH V+ +D P + + + +D ++W
Sbjct: 263 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIW 315
Score = 157 (60.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKG--- 326
KL R + GH WV +A+ TG+ D T K + K +L + + ++G
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+P L S +D + W+ +K + GH V + P + + S D +
Sbjct: 255 STRSPY-LFSCGEDKQVKCWDLEYNKVIR-HYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 312
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
++W+ T V GH V + A +++GS D+T+++WD+ K + L H
Sbjct: 313 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHK 372
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V AV P ASG D + K W
Sbjct: 373 KSVRAVVLHPLHYTFASGSPDNI-KQW 398
Score = 38 (18.4 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
Score = 37 (18.1 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 10/35 (28%), Positives = 12/35 (34%)
Query: 19 EGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLP 53
E P AP +P P Q V L+ P
Sbjct: 67 EKGPQNAPDSYPHKQYPANQGQDVEYLVTGTHPYP 101
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 275 (101.9 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 91/344 (26%), Positives = 156/344 (45%)
Query: 103 TIAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T GH + ++A SP D +A+G GD LW + + GHK+ V C+A+S D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKDG 220
G+ L SG G +Q +D +G L G I + W P H+ ++ S+D
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTLKC-VLDGPGAGIEWVRWHPRGHI------VLAGSEDC 177
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+W+ + SGH L VTC + DG +I TGS D ++ VW + I +KG
Sbjct: 178 SLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKG 237
Query: 280 HGHWVNSLA---LSTEYALR-TGAFD---H-----TGKQYSS-PEEMKKAALERYNKIKG 326
H + L +++ +L +G+ D H TGK SS +++
Sbjct: 238 HPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSA 297
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
P G D + +W+ S P+ + H++ V + + +++A+ + ++ +
Sbjct: 298 TIPLAATGGMDK-KLIIWDLQHST-PRF-ICEHEEGVTSLTWIGTSKYLATGCANGTVSI 354
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
W+ G V + GH V IS S ++ ++S S D+T +V++
Sbjct: 355 WDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFE 398
Score = 216 (81.1 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 67/249 (26%), Positives = 117/249 (46%)
Query: 238 GHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALR 296
G A+ C ++ TG D +W+ G EL GH V+ LA S + L
Sbjct: 71 GELYALACSPTDAT-LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLA 129
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSKQ 351
+G D + + + K L+ ++ + +V +GS+D ++++W K+
Sbjct: 130 SGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWN--ADKE 187
Query: 352 PKTRM-TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ--- 407
M +GH V F+PDG+ + + S D S+ +WN T + + + +GH P +
Sbjct: 188 AYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGH--PYHTEGL 245
Query: 408 --ISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV---ASG 462
+ +++S L +SGSKD ++ + +I T K+ L H D V V +SP + A+G
Sbjct: 246 TCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATG 305
Query: 463 GKDRVLKLW 471
G D+ L +W
Sbjct: 306 GMDKKLIIW 314
Score = 180 (68.4 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 70/305 (22%), Positives = 131/305 (42%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT--GHKNWVLCIAW 158
+A + GH ++V +AFS DG+ LASG D V+++D ++ T KC G + + W
Sbjct: 106 AAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGT--LKCVLDGPGAGIEWVRW 163
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
G +++GS+ L W+ + N SGH +T + P + + S
Sbjct: 164 HPRGHIVLAGSEDCSLWMWNADK-EAYLNMFSGHNLNVTCGDFTP-----DGKLICTGSD 217
Query: 219 DGDARIWDVSLRKCVICLSGH---TLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLI 274
D +W+ + + + GH T +TC+ + + +GS+D ++ + GK++
Sbjct: 218 DASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVV 277
Query: 275 RELKGHGHWVNSLALSTEYAL----RTGAFDHT----GKQYSSPEEMKKAALERYNKIKG 326
L H V + S A TG D Q+S+P + + E +
Sbjct: 278 SSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHE-EGVTSLTW 336
Query: 327 NAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ L +G + T+ +W+ + T GHQ V + S + ++ S S D + +
Sbjct: 337 IGTSKYLATGCANGTVSIWDSLLGNCVHT-YHGHQDAVQAISVSTNTDFIVSVSVDNTAR 395
Query: 386 LWNGT 390
++ +
Sbjct: 396 VFESS 400
Score = 136 (52.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/116 (31%), Positives = 55/116 (47%)
Query: 357 TGHQQLVNHVYFSP-DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSR 415
TGH+ + + SP D VA+ D LW G + A GH V +++S D +
Sbjct: 67 TGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQ 126
Query: 416 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
LL SG D ++++D + LK L G + V W P G V +G +D L +W
Sbjct: 127 LLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMW 182
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 395 VAVFRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 453
V F GH G +Y ++ S D+ L+ +G D +W I +LPGH D V + +S
Sbjct: 63 VHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFS 122
Query: 454 PDGEKVASGGKDRVLKLW 471
DG+ +ASGG D V++++
Sbjct: 123 YDGQLLASGGLDGVVQIF 140
Score = 127 (49.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 60/277 (21%), Positives = 110/277 (39%)
Query: 1 MEIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISD 60
++I ++ + C+L P G + + P+ S+ + + N +K Y S
Sbjct: 137 VQIFDASSGTLKCVLDGP-GAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSG 195
Query: 61 HELLVPLGSYLEKHKV---SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFS 117
H L V G + K+ + IV+ P+ I V HTE + + +
Sbjct: 196 HNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPY----HTEGLTCLDIN 251
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG---EL 174
+ SGS D +V + ++ T + H + V C+ +S + + G +L
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKL 311
Query: 175 QCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI 234
WD Q P + H++ +T ++W + + +G IWD L CV
Sbjct: 312 IIWDLQHSTPRF--ICEHEEGVTSLTWI-----GTSKYLATGCANGTVSIWDSLLGNCVH 364
Query: 235 CLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQ 270
GH AV + + I + S D T +V+E+++
Sbjct: 365 TYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSE 401
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 196 (74.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 47/144 (32%), Positives = 76/144 (52%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+R+ S D T+ +++ A + + + H+ V FS D ++A+ S DK +K+W+
Sbjct: 628 QRIASCGADKTLQVFK-AETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDS 686
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSR--LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
TGK V + H V ++ S LL +GS DS LK+WD+ ++ + + GH + V
Sbjct: 687 GTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSV 746
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
+SPD E +AS D LKLW
Sbjct: 747 THCRFSPDDELLASCSADGTLKLW 770
Score = 193 (73.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 95/389 (24%), Positives = 167/389 (42%)
Query: 103 TIAGHTEAVLSVAFSPDGRQL--ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
T H+E V F+ L A+GS D+ ++LWDLN + GH N V +S
Sbjct: 694 TYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSP 753
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW-EPVHLNAPCRRFVSASKD 219
D + L S S G L+ WD ++ + ++ + +++ E V + C S S D
Sbjct: 754 DDELLASCSADGTLKLWDVRSANEKKS-INVKRFFLSSEDPPEDVEVIVKC---CSWSAD 809
Query: 220 GDARIWDVSLRKCVICLSGHTLAV-TCVKWGGDGVI-YTG------------SQDCTIKV 265
GD I V+ + V+ L HT + T + G I Y SQ C +++
Sbjct: 810 GDRII--VAAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYC-VEL 866
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAA--LERYN 322
W + + +GH WV+ + S + + T + D T + + + + K +A L++
Sbjct: 867 WNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETRKVCKNSAIVLKQEI 926
Query: 323 KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ E +V D+ + K + Q V+ SP ++VA +
Sbjct: 927 DVVFQENEMMVLAVDNIRGL--QLIAGKTGQIDYLPEAQ-VSCCCLSPHLEYVAFGDEEG 983
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 442
+IK+ + + GH V I ++AD + L+S S+DS ++VW+ +T++ L
Sbjct: 984 AIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF-LQA 1042
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H + V D ++ S D +K+W
Sbjct: 1043 HQETVKDFRLLRDS-RLLSWSFDGTVKVW 1070
Score = 192 (72.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 56/214 (26%), Positives = 100/214 (46%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P NR ++ GH +AV + F+ DG+ L S S D+ +++W+ T+ +F H+ V
Sbjct: 991 PNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF-LQAHQETVKD 1049
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
D + L+S S G ++ W+ TG+ + + H+ + + +++ +F S
Sbjct: 1050 FRLLRDSR-LLSWSFDGTVKVWNVITGRIERD-FTCHQGTVLSCA-----ISSDATKFSS 1102
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
S D A+IW L + L GH V C + DG++ TG + I++W + G+L+
Sbjct: 1103 TSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162
Query: 275 REL------KG---HGHWVNSLALSTEYALRTGA 299
+G HG WV + S + + A
Sbjct: 1163 HLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSA 1196
Score = 185 (70.2 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 46/173 (26%), Positives = 86/173 (49%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + H++ VLC A
Sbjct: 605 NLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCA 664
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EPVHLNAPCRRFVS 215
+S+D ++ + S +++ WD TGK + H + + + + HL +
Sbjct: 665 FSSDDSYIATCSVDKKVKIWDSGTGKLV-HTYEEHSEQVNCCHFTNKSNHL-----LLAT 718
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWE 267
S D ++WD++ ++C + GHT +VT ++ D + S D T+K+W+
Sbjct: 719 GSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWD 771
Score = 159 (61.0 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 57/185 (30%), Positives = 78/185 (42%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL----- 154
C T+ GHT +V FSPD LAS S D T++LWD+ + K K + L
Sbjct: 735 CRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEK-KSINVKRFFLSSEDP 793
Query: 155 ---------CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV- 204
C +WSADG ++ +K ++ D T +GH I + P
Sbjct: 794 PEDVEVIVKCCSWSADGDRIIVAAK-NKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYD 852
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
HL V A +W++ R V GH V V + DG + T S D TI
Sbjct: 853 HLA------VIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTI 906
Query: 264 KVWET 268
+VWET
Sbjct: 907 RVWET 911
Score = 157 (60.3 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 307 YSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV 366
+SS KKA R+ + + + L+S S+D + +W + + HQ+ V
Sbjct: 996 FSSGIGHKKAV--RHIQFTADG-KTLISSSEDSVIQVWNWQTEEY--VFLQAHQETVKDF 1050
Query: 367 YFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTL 426
D + + S SFD ++K+WN TG+ F H G V + S+D+ S S D T
Sbjct: 1051 RLLRDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTA 1109
Query: 427 KVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
K+W +L GH V +S DG +A+G + +++W
Sbjct: 1110 KIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIW 1154
Score = 157 (60.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 40/155 (25%), Positives = 74/155 (47%)
Query: 319 ERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
E Y + K A + + +G + ++ + + + + H V H FS DGQ +AS
Sbjct: 575 EVYQQAKLQAKQEVDTGRL-YLEWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASC 633
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
DK+++++ TG+ + + H V ++S+D + + S D +K+WD T KL
Sbjct: 634 GADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVH 693
Query: 439 DLPGHADEVFAVDWSPDGEKV--ASGGKDRVLKLW 471
H+++V ++ + A+G D LKLW
Sbjct: 694 TYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLW 728
Score = 133 (51.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 43/150 (28%), Positives = 65/150 (43%)
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV--ASASFDKSIKLWNGTTGK 393
S D + +W+ K T H + VN +F+ + A+ S D +KLW+ +
Sbjct: 676 SVDKKVKIWDSGTGKLVHT-YEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKE 734
Query: 394 FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL-----------PG 442
GH V +S D LL S S D TLK+WD+R+ K+ + P
Sbjct: 735 CRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKRFFLSSEDPP 794
Query: 443 HADEVFA--VDWSPDGEKVASGGKDRVLKL 470
EV WS DG+++ K++VL L
Sbjct: 795 EDVEVIVKCCSWSADGDRIIVAAKNKVLLL 824
Score = 132 (51.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 59/264 (22%), Positives = 112/264 (42%)
Query: 208 APCRRFVS-ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKV 265
+P +V+ ++G +I ++ + GH AV +++ DG + + S+D I+V
Sbjct: 970 SPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQV 1029
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS-PEEMKKAALERYNKI 324
W + + L+ H V L + L + +FD T K ++ +++ +
Sbjct: 1030 WNWQTEEYVF-LQAHQETVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTV 1088
Query: 325 KGNA----PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
A + S S D T +W + P + GH V FS DG +A+
Sbjct: 1089 LSCAISSDATKFSSTSADKTAKIWSFELPS-PLHELKGHNSCVRCSAFSLDGILLATGDD 1147
Query: 381 DKSIKLWNGTTGKF------VAVFRG---HVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
+ I++WN + G+ +++ G H G V + +S D ++L+S LK W++
Sbjct: 1148 NGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSAG--GYLKWWNV 1205
Query: 432 RTQKLKQDLPGHADEVFAVDWSPD 455
T + Q + + + SPD
Sbjct: 1206 VTGESSQTFYTNGTNLKKIHVSPD 1229
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVS 167
Q ++K G WV + GK +++
Sbjct: 137 QQKLWKLNGEPGWVTIYGMAGCGKSVLA 164
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 200 (75.5 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 70/251 (27%), Positives = 109/251 (43%)
Query: 243 VTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH-G-----HW--VNSLALSTEY 293
VT + W +G + TGS D ++W T G L L H G W + LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 294 ALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP 352
T +D HTG+ AL+ + + S S D + + + +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALD----VDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
KT GH VN + + P G +AS S D ++K+W+ V + H +Y I WS
Sbjct: 343 KT-FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSP 401
Query: 413 --------DSRLLL----SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 460
++ L+L S S DST+++WD+ L H + V++V +SPDG +A
Sbjct: 402 TGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLA 461
Query: 461 SGGKDRVLKLW 471
SG D+ + +W
Sbjct: 462 SGSFDKCVHIW 472
Score = 190 (71.9 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 80/323 (24%), Positives = 133/323 (41%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S +G Q + G + +K +T + W N+ + S DG AR
Sbjct: 197 NLSENSTSGSTQLVLRHCIREGGQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFAR 250
Query: 224 IW--DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
IW D +L + G A+ K G+ ++ G TI +W+ G+ ++ H
Sbjct: 251 IWTKDGNLASTLGQHKGPIFALKWNK-KGNFILSAGVDKTTI-IWDAHTGEAKQQFPFHS 308
Query: 282 HW---VNSLALSTEYALRTGAFDHTGKQ-YSSPEEMKKAALERYNKIKGNAPERLVSG-S 336
V+ + +T + T H K P + + N IK + L++ S
Sbjct: 309 APALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCS 368
Query: 337 DDFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQW------------VASASFDK 382
DD T+ +W KQ + H + + + +SP G + SASFD
Sbjct: 369 DDMTLKIWS---MKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDS 425
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 442
+++LW+ G + H PVY +++S D R L SGS D + +W+ +T L G
Sbjct: 426 TVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG 485
Query: 443 HADEVFAVDWSPDGEKVASGGKD 465
+F V W+ G+KV + D
Sbjct: 486 TGG-IFEVCWNAAGDKVGASASD 507
Score = 166 (63.5 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S S D T+ LW+ T +T HQ+ V V FSPDG+++AS SFDK + +WN T
Sbjct: 418 LDSASFDSTVRLWDVDRGICIHT-LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 476
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
G V +RG G ++++ W+A + + + D ++ V D+R
Sbjct: 477 GALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 516
Score = 166 (63.5 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 65/243 (26%), Positives = 103/243 (42%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-------TQTPMFKCT- 147
P N+ + + GH V A++P LASGSGD+T R+W+L+ TQ + C
Sbjct: 158 PPNK-AVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR 216
Query: 148 -GHKNW-----VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
G ++ V + W+++G L +GS G + W S L HK I + W
Sbjct: 217 EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW 274
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDC 261
N +SA D IWD + H+ V W + + S D
Sbjct: 275 -----NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDM 329
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER 320
I V + Q + I+ +GH + VN++ T L + + D T K +S ++ L+
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQA 389
Query: 321 YNK 323
+NK
Sbjct: 390 HNK 392
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 332 LVSGSDDFTMFLWEPAV-SKQPKTRMT-------GHQQL-----VNHVYFSPDGQWVASA 378
L SGS D T +W + S T++ G Q + V + ++ +G +A+
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
S+D ++W G + H GP++ + W+ +LS D T +WD T + KQ
Sbjct: 244 SYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQ 302
Query: 439 DLPGHADEVFAVDW 452
P H+ VDW
Sbjct: 303 QFPFHSAPALDVDW 316
Score = 127 (49.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 93 RIRPVNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
R+ V+R C T+ H E V SVAFSPDGR LASGS D V +W+ T + G
Sbjct: 428 RLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-T 486
Query: 151 NWVLCIAWSADGKHLVSGSKAGEL 174
+ + W+A G + + + G +
Sbjct: 487 GGIFEVCWNAAGDKVGASASDGSV 510
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFR------GHVGP- 404
+ GH+ V ++P +AS S D + ++WN T+G V R G P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 405 ---VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
V + W+++ LL +GS D ++W + L L H +FA+ W+ G + S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 462 GGKDRVLKLW 471
G D+ +W
Sbjct: 284 AGVDKTTIIW 293
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR-------TQKLK--------QDLP 441
V RGH V+ +W+ S LL SGS DST ++W++ TQ + QD+P
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ D V ++DW+ +G +A+G D ++W
Sbjct: 224 SNKD-VTSLDWNSEGTLLATGSYDGFARIW 252
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 8 TNNVMCLLTDPEGNPLGA 25
TN V + DP GN L +
Sbjct: 349 TNEVNAIKWDPTGNLLAS 366
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 281 (104.0 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 90/335 (26%), Positives = 162/335 (48%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 298 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 351
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 403
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 404 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 462
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 463 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 521
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T + HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 579
Query: 396 AVF-----RGHVGPVYQISWSADSRLLLSGSKDST 425
G G V++I S + GS++ T
Sbjct: 580 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 614
Score = 276 (102.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 84/267 (31%), Positives = 121/267 (45%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 315 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 373
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 374 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 432
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 433 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 486
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD 445
+W+ TG + GH +L+SG+ DST+K+WDI+T + Q L G +
Sbjct: 487 VWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSK 544
Query: 446 EVFAVDWSPDGEK-VASGGKDRVLKLW 471
AV + V + D +KLW
Sbjct: 545 HQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 256 (95.2 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 79/300 (26%), Positives = 143/300 (47%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 300 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 352
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 353 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 408
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 409 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 468 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 524
Query: 384 IKLWNGTTGKFVAVFRG---HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
+K+W+ TG+ + +G H V + ++ + +++ S D T+K+WD++T + ++L
Sbjct: 525 VKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 229 (85.7 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 334 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 389
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 390 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 441
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 442 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 500
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ +K + +
Sbjct: 501 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFV 559
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 560 ITSSDDGTVKLWD 572
Score = 189 (71.6 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 58/210 (27%), Positives = 101/210 (48%)
Query: 266 WETTQGKLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI 324
W + K + LKGH H + L + +G+ D+T K +S+ L +
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGG 345
Query: 325 KGNAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
++ R ++SGS D T+ +W + T + GH V ++ + V S S D
Sbjct: 346 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHT-LYGHTSTVRCMHLHE--KRVVSGSRD 402
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
++++W+ TG+ + V GHV V + + D R ++SG+ D +KVWD T+ L
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 460
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH + V+++ + DG V SG D +++W
Sbjct: 461 GHTNRVYSLQF--DGIHVVSGSLDTSIRVW 488
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GHT V S+ F DG + SGS DT++R+WD+ T + TGH++ L
Sbjct: 455 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGME 510
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASK 218
LVSG+ ++ WD +TG+ L G K + ++ + N + FV ++S
Sbjct: 511 LKDNILVSGNADSTVKIWDIKTGQCL-QTLQGPSKHQSAVTC--LQFN---KNFVITSSD 564
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY 255
DG ++WD+ + + L VT G GV++
Sbjct: 565 DGTVKLWDLKTGEFIRNL------VTLESGGSGGVVW 595
Score = 38 (18.4 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 234 ICLSGHTLAVTCVKW 248
+C+ L ++CV W
Sbjct: 3 VCVPSSVLVLSCVCW 17
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 280 (103.6 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 90/335 (26%), Positives = 161/335 (48%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 256 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 309
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 310 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 361
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 362 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 420
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 421 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 479
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 480 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 537
Query: 396 AVF-----RGHVGPVYQISWSADSRLLLSGSKDST 425
G G V++I S + GS++ T
Sbjct: 538 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 572
Score = 275 (101.9 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 84/269 (31%), Positives = 123/269 (45%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 273 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 331
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 332 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 390
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 391 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 444
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG--- 442
+W+ TG + GH +L+SG+ DST+K+WDI+T + Q L G
Sbjct: 445 VWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK 502
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V + ++ + V + D +KLW
Sbjct: 503 HQSAVTCLQFNKNF--VITSSDDGTVKLW 529
Score = 256 (95.2 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 79/300 (26%), Positives = 143/300 (47%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 258 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 310
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 311 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 366
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 367 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 425
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 426 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 482
Query: 384 IKLWNGTTGKFVAVFRG---HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
+K+W+ TG+ + +G H V + ++ + +++ S D T+K+WD++T + ++L
Sbjct: 483 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 540
Score = 234 (87.4 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 292 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 347
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 348 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 399
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 400 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 458
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 459 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 517
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 518 ITSSDDGTVKLWD 530
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 58/210 (27%), Positives = 101/210 (48%)
Query: 266 WETTQGKLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI 324
W + K + LKGH H + L + +G+ D+T K +S+ L +
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGG 303
Query: 325 KGNAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
++ R ++SGS D T+ +W + T + GH V ++ + V S S D
Sbjct: 304 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHT-LYGHTSTVRCMHLHE--KRVVSGSRD 360
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
++++W+ TG+ + V GHV V + + D R ++SG+ D +KVWD T+ L
Sbjct: 361 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 418
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH + V+++ + DG V SG D +++W
Sbjct: 419 GHTNRVYSLQF--DGIHVVSGSLDTSIRVW 446
Score = 157 (60.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GHT V S+ F DG + SGS DT++R+WD+ T + TGH++ L
Sbjct: 413 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGME 468
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASK 218
LVSG+ ++ WD +TG+ L G K + ++ + N + FV ++S
Sbjct: 469 LKDNILVSGNADSTVKIWDIKTGQCL-QTLQGPNKHQSAVTC--LQFN---KNFVITSSD 522
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY 255
DG ++WD+ + + L VT G GV++
Sbjct: 523 DGTVKLWDLKTGEFIRNL------VTLESGGSGGVVW 553
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 271 (100.5 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 86/312 (27%), Positives = 145/312 (46%)
Query: 89 QAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG 148
Q +FR + R GH+ + + F PDG Q+A+ S D+TV LW+LN +
Sbjct: 2 QGLFRDPALER---HFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFAS 58
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLN 207
H V +AWS G + S ++ W+P+ SG ++ H K + + ++ HL
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVA-HSKAVRSVDFDSTGHL- 116
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
++AS D A+IW V+ R+ V + V K+ +G ++ T S D +++++
Sbjct: 117 -----MLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIY 171
Query: 267 ETTQGKLIR----------ELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKA 316
+ G+ +R +L H W N LA++ R FD +G Q + A
Sbjct: 172 DVDSGECVRTFTEERAAPRQLAWHP-WGNMLAVALG-CNRIKIFDVSGSQLLQLYVVHSA 229
Query: 317 ALERYNKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ N + + L+SGSDD T+ + + + +P +TGH VN V FS DG
Sbjct: 230 PV---NDVAFHPSGHFLLSGSDDRTIRILD-LLEGRPIYTLTGHTDAVNAVAFSRDGDKF 285
Query: 376 ASASFDKSIKLW 387
A+ D+ + +W
Sbjct: 286 ATGGSDRQLLVW 297
Score = 234 (87.4 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 72/289 (24%), Positives = 137/289 (47%)
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
+GH IT + + P + ++S D +W+++ I + H+ V V W
Sbjct: 15 TGHSGGITQLRFGP-----DGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWS 69
Query: 250 GDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQY 307
G ++ + D T+K+WE + E H V S+ ST + + T + D + K +
Sbjct: 70 PKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIW 129
Query: 308 S-SPEEMKKAALERYNKIKGN--APE-RLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ + + ++ N ++ +P +LV+ SDD ++ +++ + +T T +
Sbjct: 130 RVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRT-FTEERAA 188
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
+ + P G +A A IK+++ + + + ++ H PV +++ LLSGS
Sbjct: 189 PRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSD 248
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D T+++ D+ + L GH D V AV +S DG+K A+GG DR L +W
Sbjct: 249 DRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 178 (67.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP 404
+PA+ + TGH + + F PDG +A++S D ++ LWN F H P
Sbjct: 7 DPALERH----FTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAP 62
Query: 405 VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 464
V ++WS L+ S D T+K+W+ + + + + H+ V +VD+ G + +
Sbjct: 63 VNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASD 122
Query: 465 DRVLKLW 471
D+ K+W
Sbjct: 123 DKSAKIW 129
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 285 (105.4 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 104/395 (26%), Positives = 177/395 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL----- 154
C T+ GHT +V FSPD + LAS S D T++LWD+ + K K + L
Sbjct: 737 CRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANER-KSINVKQFFLNSEEP 795
Query: 155 ---------CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C +WSADG ++ +K ++ +D + GH + + P H
Sbjct: 796 QEDLEVIVKCCSWSADGAKIMVAAK-NKVFLFDIHSSGLLAEMHMGHHSAVQYCDFSP-H 853
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIK 264
+ V A +W + V GH V CV + DG + T S D TI+
Sbjct: 854 NHLA----VVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIR 909
Query: 265 VWETTQ-----GKLIRELKGHGHWVNSLA-LSTEYALRTGAFD-HTGK-QYSSPEEMKKA 316
+WET + ++++ N + L+ + R + +TG+ Y + ++
Sbjct: 910 LWETKKVCKNSATVLKQEIDVVFQENEVTVLAVDNIRRLQLINGNTGQIDYLTEAQVSCC 969
Query: 317 ALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
L + + L G +D + + E ++ ++R GH+ V H+ F+ DG+ +
Sbjct: 970 CLSPHLQY-------LAFGGEDGAIQILELLNNRIFQSR-NGHKTTVRHIQFTADGKTLI 1021
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
S+S D ++++WN + + + H V +SRLL S S D T+KVW+I T+++
Sbjct: 1022 SSSDDSAVQIWNWQS-EDPFFLQAHQETVKDFRLLKNSRLL-SWSFDGTVKVWNIITRRI 1079
Query: 437 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
++D H D V + D S D K +S D+ K+W
Sbjct: 1080 EKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIW 1114
Score = 196 (74.1 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 45/144 (31%), Positives = 78/144 (54%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+R+ S D T+ +++ A + + + H+ V FS D +++A+ S DK +K+WN
Sbjct: 630 QRIASCGADKTLQVFK-AETGEKLLEIKAHEDEVLCCAFSADDKFIATCSVDKKVKIWNS 688
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSR--LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
TG+ V ++ H V ++ +S LL +GS D LK+WD+ ++ + + GH + V
Sbjct: 689 MTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFGHTNSV 748
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
+SPD + +AS D LKLW
Sbjct: 749 SHCRFSPDDQVLASCSADGTLKLW 772
Score = 181 (68.8 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 47/190 (24%), Positives = 92/190 (48%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + + H++ VLC A
Sbjct: 607 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 666
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+SAD K + + S +++ W+ TG+ H + + + N+ + S
Sbjct: 667 FSADDKFIATCSVDKKVKIWNSMTGELV-RIYDEHSEQVNCCHFTN---NSNHLLLATGS 722
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD++ +C + GHT +V+ ++ D V+ + S D T+K+W+ +
Sbjct: 723 NDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKS 782
Query: 277 LKGHGHWVNS 286
+ ++NS
Sbjct: 783 INVKQFFLNS 792
Score = 162 (62.1 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 54/212 (25%), Positives = 96/212 (45%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
NR + GH V + F+ DG+ L S S D+ V++W+ ++ P F H+ V
Sbjct: 995 NRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFF-LQAHQETVKDFR 1053
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ + L+S S G ++ W+ T + + + H+ T +S + +++ +F S S
Sbjct: 1054 LLKNSR-LLSWSFDGTVKVWNIITRRIEKDFVC-HQD--TVLSCD---ISSDATKFSSTS 1106
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRE 276
D A+IW L + L GH V C + + ++ TG + I++W + G+L+
Sbjct: 1107 ADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNVSNGELLHL 1166
Query: 277 L------KG---HGHWVNSLALSTEYALRTGA 299
+G HG WV L S + + A
Sbjct: 1167 CAPISVEEGAATHGGWVTDLCFSPDTKMLVSA 1198
Score = 156 (60.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 34/115 (29%), Positives = 61/115 (53%)
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLL 418
H V H FS DGQ +AS DK+++++ TG+ + + H V ++SAD + +
Sbjct: 616 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDKFIA 675
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV--ASGGKDRVLKLW 471
+ S D +K+W+ T +L + H+++V ++ + + A+G D LKLW
Sbjct: 676 TCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLW 730
Score = 138 (53.6 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 52/228 (22%), Positives = 97/228 (42%)
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQ---YSSPEEM 313
G +D I++ E ++ + GH V + + + + D + Q + S +
Sbjct: 981 GGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPF 1040
Query: 314 -KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+A E + RL+S S D T+ +W ++++ + HQ V S D
Sbjct: 1041 FLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWN-IITRRIEKDFVCHQDTVLSCDISSDA 1099
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+S S DK+ K+W+ + RGH G V S+S ++ LL +G + +++W++
Sbjct: 1100 TKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNVS 1159
Query: 433 TQKL---------KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+L ++ H V + +SPD + + S G LK W
Sbjct: 1160 NGELLHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVSAGG--YLKWW 1205
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 280 (103.6 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 90/335 (26%), Positives = 161/335 (48%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 296 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 349
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 350 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 401
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 402 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 460
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 461 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 519
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 520 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 577
Query: 396 AVF-----RGHVGPVYQISWSADSRLLLSGSKDST 425
G G V++I S + GS++ T
Sbjct: 578 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 612
Score = 275 (101.9 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 84/269 (31%), Positives = 123/269 (45%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 313 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 371
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 372 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 430
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 431 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 484
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG--- 442
+W+ TG + GH +L+SG+ DST+K+WDI+T + Q L G
Sbjct: 485 VWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK 542
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V + ++ + V + D +KLW
Sbjct: 543 HQSAVTCLQFNKNF--VITSSDDGTVKLW 569
Score = 256 (95.2 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 79/300 (26%), Positives = 143/300 (47%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 298 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 350
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 351 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 406
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 407 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 466 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 522
Query: 384 IKLWNGTTGKFVAVFRG---HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
+K+W+ TG+ + +G H V + ++ + +++ S D T+K+WD++T + ++L
Sbjct: 523 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 580
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 332 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 387
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 388 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 439
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 440 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 498
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 499 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 557
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 558 ITSSDDGTVKLWD 570
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 58/210 (27%), Positives = 101/210 (48%)
Query: 266 WETTQGKLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI 324
W + K + LKGH H + L + +G+ D+T K +S+ L +
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGG 343
Query: 325 KGNAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
++ R ++SGS D T+ +W + T + GH V ++ + V S S D
Sbjct: 344 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHT-LYGHTSTVRCMHLHE--KRVVSGSRD 400
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
++++W+ TG+ + V GHV V + + D R ++SG+ D +KVWD T+ L
Sbjct: 401 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 458
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH + V+++ + DG V SG D +++W
Sbjct: 459 GHTNRVYSLQF--DGIHVVSGSLDTSIRVW 486
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GHT V S+ F DG + SGS DT++R+WD+ T + TGH++ L
Sbjct: 453 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGME 508
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASK 218
LVSG+ ++ WD +TG+ L G K + ++ + N + FV ++S
Sbjct: 509 LKDNILVSGNADSTVKIWDIKTGQCL-QTLQGPNKHQSAVTC--LQFN---KNFVITSSD 562
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY 255
DG ++WD+ + + L VT G GV++
Sbjct: 563 DGTVKLWDLKTGEFIRNL------VTLESGGSGGVVW 593
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 279 (103.3 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 83/305 (27%), Positives = 150/305 (49%)
Query: 99 RCSATIAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
R + GH + V++ + F G ++ SGS D T+++W T + GH V
Sbjct: 293 RSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---- 346
Query: 158 WSADGKH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
WS+ + ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS
Sbjct: 347 WSSQMRDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVS 398
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
S+D R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ +
Sbjct: 399 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLH 457
Query: 276 ELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---L 332
L+GH + V SL + + +G+ D + + + L + + + L
Sbjct: 458 TLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNIL 516
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
VSG+ D T+ +W+ + +T + HQ V + F+ + +V ++S D ++KLW+
Sbjct: 517 VSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 574
Query: 391 TGKFV 395
TG+F+
Sbjct: 575 TGEFI 579
Score = 276 (102.2 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 84/267 (31%), Positives = 121/267 (45%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 315 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 373
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 374 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 432
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 433 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 486
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD 445
+W+ TG + GH +L+SG+ DST+K+WDI+T + Q L G +
Sbjct: 487 VWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSK 544
Query: 446 EVFAVDWSPDGEK-VASGGKDRVLKLW 471
AV + V + D +KLW
Sbjct: 545 HQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 256 (95.2 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 79/300 (26%), Positives = 143/300 (47%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 300 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 352
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 353 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 408
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 409 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 468 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 524
Query: 384 IKLWNGTTGKFVAVFRG---HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
+K+W+ TG+ + +G H V + ++ + +++ S D T+K+WD++T + ++L
Sbjct: 525 VKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 254 (94.5 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 414 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 471
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 472 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 521
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 580
Query: 276 EL 277
L
Sbjct: 581 NL 582
Score = 186 (70.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 57/210 (27%), Positives = 101/210 (48%)
Query: 266 WETTQGKLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI 324
W + + + LKGH H + L + +G+ D+T K +S+ L +
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGG 345
Query: 325 KGNAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
++ R ++SGS D T+ +W + T + GH V ++ + V S S D
Sbjct: 346 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHT-LYGHTSTVRCMHLHE--KRVVSGSRD 402
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
++++W+ TG+ + V GHV V + + D R ++SG+ D +KVWD T+ L
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 460
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH + V+++ + DG V SG D +++W
Sbjct: 461 GHTNRVYSLQF--DGIHVVSGSLDTSIRVW 488
Score = 37 (18.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 234 ICLSGHTLAVTCVKW 248
+C+ L ++CV W
Sbjct: 3 VCVLSSVLVLSCVCW 17
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 266 (98.7 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 74/261 (28%), Positives = 131/261 (50%)
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW-ETTQGKLIRE 276
D +W + + +GH AVTCV + G ++ +GS+D T+++W +G+
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-V 60
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGN--APE-R 331
+ H V S+ ++ + T + D T K +++ + +L ++ N ++ +P+ R
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR 120
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
L VS SDD T+ LW+ + S++ H V +V F P G +A+A D ++K+W+
Sbjct: 121 LIVSASDDKTVKLWDKS-SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
T + + ++ H V +S+ L++ S DSTLK+ D+ +L L GH V
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTV 239
Query: 451 DWSPDGEKVASGGKDRVLKLW 471
+S GE ASGG D + +W
Sbjct: 240 AFSRTGEYFASGGSDEQVMVW 260
Score = 233 (87.1 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D TV++W + Q +F + H NWV C +S
Sbjct: 58 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP 117
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD ++ + + H ++T + + P + C +A D
Sbjct: 118 DGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 171
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 172 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 231
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 232 HQGPATTVAFS-----RTGEYFASG 251
Score = 232 (86.7 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 70/218 (32%), Positives = 101/218 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ ++P +R + GH +AV V FSP G LASGS D TVR+W N + H
Sbjct: 7 VWHMKPQSR-AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT 65
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + + +DG+ V+ S ++ W K + LS H W+ + P
Sbjct: 66 ATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFS-LSQHINWVRCAKFSP-----DG 119
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VSAS D ++WD S R+CV H VT V + G I D T+KVW+
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 270 QGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VN L+ S Y + T + D T K
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTLK 216
Score = 228 (85.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 71/284 (25%), Positives = 123/284 (43%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
D+ + +W + Q+ ++ TGHK+ V C+ +S G L SGS+ ++ W P K
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV-KGESTV 60
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
H + VH + + FV+AS D ++W +K + LS H V C K+
Sbjct: 61 FRAHTATVRS-----VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKF 115
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ 306
DG +I + S D T+K+W+ + + + HG +V + + D+T K
Sbjct: 116 SPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 175
Query: 307 YSSPEEMKKAALERYNK-IKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + ++ + G + P L++ S D T+ + + + T + GHQ
Sbjct: 176 WDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYT-LHGHQG 234
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
V FS G++ AS D+ + +W F V G V V
Sbjct: 235 PATTVAFSRTGEYFASGGSDEQVMVWKSN---FDIVDHGEVTKV 275
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 279 (103.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 80/245 (32%), Positives = 120/245 (48%)
Query: 243 VTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST--EYALRTGA 299
VT + W G+G + TGS D ++W T G+LI L H + SL + +Y L TG+
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLL-TGS 384
Query: 300 FDHTGKQYSSPEEMKKAALERYNKIKGNAPER----LVSGSDDFTMFLWEPAVSKQPKTR 355
D T + E K E ++ + R + S D ++L + ++ KT
Sbjct: 385 VDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKT- 443
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA--- 412
TGHQ VN V + P G +AS S D + K+WN FV R H +Y I WS
Sbjct: 444 FTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGP 503
Query: 413 -----DSRLLL-SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 466
+ +L L S S DST+K+WD K+ GH + V+++ +SP+GE +ASG D+
Sbjct: 504 GTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDK 563
Query: 467 VLKLW 471
+ +W
Sbjct: 564 SIHIW 568
Score = 246 (91.7 bits), Expect = 7.3e-18, P = 7.3e-18
Identities = 76/286 (26%), Positives = 131/286 (45%)
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG- 252
K +T + W N + S DG ARIW ++ + + LS H + +KW G
Sbjct: 325 KDVTTLDW-----NGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGD 378
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHG------HWVNSLALSTEYALRTGAFDHTGK- 305
+ TGS D T VW+ + ++ + H W N+++ +T T + + K
Sbjct: 379 YLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATS---STDSMIYLCKI 435
Query: 306 QYSSPEEMKKAALERYNKIKGNAPERLVSG-SDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+ P + N +K + L++ SDD T +W S + H + +
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHD-LREHTKEIY 494
Query: 365 HVYFSPDGQW---------VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSR 415
+ +SP G +ASASFD ++KLW+ GK + F GH PVY +++S +
Sbjct: 495 TIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGE 554
Query: 416 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
+ SGS D ++ +W I+ K+ + G+ +F V W+ +G K+A+
Sbjct: 555 YIASGSLDKSIHIWSIKEGKIVKTYTGNGG-IFEVCWNKEGNKIAA 599
Score = 220 (82.5 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 77/295 (26%), Positives = 130/295 (44%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V + W+ +G L +GS G+ + W G+ LS HK I + W N
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWT-LNGELIST-LSKHKGPIFSLKW-----NKKGDY 379
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
++ S D A +WDV + H+ V W + T S D I + + + +
Sbjct: 380 LLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETR 439
Query: 273 LIRELKGHGHWVNSLALS-TEYALRTGAFDHTGK-----QYSSPEEMKKAALERYN---K 323
+ GH VN + T L + + D T K Q + ++++ E Y
Sbjct: 440 PAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWS 499
Query: 324 IKG---NAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVAS 377
G N P + L S S D T+ LW+ + K GH++ V + FSP+G+++AS
Sbjct: 500 PTGPGTNNPNKQLTLASASFDSTVKLWDAELGKM-LCSFNGHREPVYSLAFSPNGEYIAS 558
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
S DKSI +W+ GK V + G+ G ++++ W+ + + + D+++ V D R
Sbjct: 559 GSLDKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSVCVLDFR 612
Score = 178 (67.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 50/180 (27%), Positives = 80/180 (44%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H+ L V + + A+ S D+ + L + P TGH+ V C+ W G L
Sbjct: 406 HSGPTLDVDWR-NNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLA 464
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH--LNAPCRRFV--SASKDGDA 222
S S + W+ + + L H K I I W P N P ++ SAS D
Sbjct: 465 SCSDDSTAKIWNIKQST-FVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTV 523
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD L K + +GH V + + +G I +GS D +I +W +GK+++ G+G
Sbjct: 524 KLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNG 583
Score = 173 (66.0 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 55/213 (25%), Positives = 95/213 (44%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+T++ H + S+ ++ G L +GS D T +WD+ + + H L + W +
Sbjct: 359 STLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNN 418
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKDG 220
S + + C +T +P+ +GH+ + + W+P L A C S D
Sbjct: 419 VSFATSSTDSMIYLCKIGET-RPA-KTFTGHQGEVNCVKWDPTGSLLASC------SDDS 470
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGV--------IYTGSQDCTIKVWETTQ 270
A+IW++ V L HT + ++W G G + + S D T+K+W+
Sbjct: 471 TAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAEL 530
Query: 271 GKLIRELKGHGHWVNSLALST--EYALRTGAFD 301
GK++ GH V SLA S EY + +G+ D
Sbjct: 531 GKMLCSFNGHREPVYSLAFSPNGEY-IASGSLD 562
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 31/123 (25%), Positives = 59/123 (47%)
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
+ K K + + V + ++ +G +A+ S D ++W G+ ++ H GP++
Sbjct: 312 ILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWT-LNGELISTLSKHKGPIFS 370
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 467
+ W+ LL+GS D T VWD++ ++ KQ H+ VDW + A+ D +
Sbjct: 371 LKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSM 429
Query: 468 LKL 470
+ L
Sbjct: 430 IYL 432
Score = 130 (50.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 44/163 (26%), Positives = 69/163 (42%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R + T GH V V + P G LAS S D+T ++W++ T + H + I W
Sbjct: 439 RPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRW 498
Query: 159 SADG-------KHLV--SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
S G K L S S ++ WD + GK + +GH++ + +++ P N
Sbjct: 499 SPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCS-FNGHREPVYSLAFSP---NG- 553
Query: 210 CRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG 252
S S D IW + K V +G+ + V W +G
Sbjct: 554 -EYIASGSLDKSIHIWSIKEGKIVKTYTGNG-GIFEVCWNKEG 594
Score = 118 (46.6 bits), Expect = 0.00098, P = 0.00098
Identities = 60/222 (27%), Positives = 85/222 (38%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC--TGHKNWVLCIAWSAD 161
+ GHT V + A+SP LASGSGD T R+W + + FK TG +N I A
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGS--FKAVHTG-RNINALILKHAK 317
Query: 162 GKHLVSGSKAGELQCWDPQ-----TGKPSG------------NPLSGHKKWITGISWEPV 204
GK L W+ + TG G + LS HK I + W
Sbjct: 318 GKSNEKSKDVTTLD-WNGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKW--- 373
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIK 264
N ++ S D A +WDV + H+ V W + T S D I
Sbjct: 374 --NKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIY 431
Query: 265 VWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGK 305
+ + + + + GH VN + T L + + D T K
Sbjct: 432 LCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAK 473
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 280 (103.6 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 90/335 (26%), Positives = 161/335 (48%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 376 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 429
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 430 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 481
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 482 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 540
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 541 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 599
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 600 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 657
Query: 396 AVF-----RGHVGPVYQISWSADSRLLLSGSKDST 425
G G V++I S + GS++ T
Sbjct: 658 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 692
Score = 275 (101.9 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 84/269 (31%), Positives = 123/269 (45%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 393 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 451
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 452 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 510
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 511 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 564
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG--- 442
+W+ TG + GH +L+SG+ DST+K+WDI+T + Q L G
Sbjct: 565 VWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK 622
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V + ++ + V + D +KLW
Sbjct: 623 HQSAVTCLQFNKNF--VITSSDDGTVKLW 649
Score = 256 (95.2 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 79/300 (26%), Positives = 143/300 (47%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 378 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 430
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 431 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 486
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 487 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 546 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 602
Query: 384 IKLWNGTTGKFVAVFRG---HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
+K+W+ TG+ + +G H V + ++ + +++ S D T+K+WD++T + ++L
Sbjct: 603 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 660
Score = 234 (87.4 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 412 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 467
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 468 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 519
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 520 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 578
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 579 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 637
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 638 ITSSDDGTVKLWD 650
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 58/210 (27%), Positives = 101/210 (48%)
Query: 266 WETTQGKLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI 324
W + K + LKGH H + L + +G+ D+T K +S+ L +
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGG 423
Query: 325 KGNAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
++ R ++SGS D T+ +W + T + GH V ++ + V S S D
Sbjct: 424 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHT-LYGHTSTVRCMHLHE--KRVVSGSRD 480
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
++++W+ TG+ + V GHV V + + D R ++SG+ D +KVWD T+ L
Sbjct: 481 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 538
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH + V+++ + DG V SG D +++W
Sbjct: 539 GHTNRVYSLQF--DGIHVVSGSLDTSIRVW 566
Score = 157 (60.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GHT V S+ F DG + SGS DT++R+WD+ T + TGH++ L
Sbjct: 533 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGME 588
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASK 218
LVSG+ ++ WD +TG+ L G K + ++ + N + FV ++S
Sbjct: 589 LKDNILVSGNADSTVKIWDIKTGQCL-QTLQGPNKHQSAVTC--LQFN---KNFVITSSD 642
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY 255
DG ++WD+ + + L VT G GV++
Sbjct: 643 DGTVKLWDLKTGEFIRNL------VTLESGGSGGVVW 673
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 280 (103.6 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 90/335 (26%), Positives = 161/335 (48%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 381 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 434
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 435 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 486
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 487 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 545
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 546 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 604
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 605 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 662
Query: 396 AVF-----RGHVGPVYQISWSADSRLLLSGSKDST 425
G G V++I S + GS++ T
Sbjct: 663 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 697
Score = 275 (101.9 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 84/269 (31%), Positives = 123/269 (45%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 398 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 456
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 457 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 515
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 516 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 569
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG--- 442
+W+ TG + GH +L+SG+ DST+K+WDI+T + Q L G
Sbjct: 570 VWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK 627
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V + ++ + V + D +KLW
Sbjct: 628 HQSAVTCLQFNKNF--VITSSDDGTVKLW 654
Score = 256 (95.2 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 79/300 (26%), Positives = 143/300 (47%)
Query: 148 GHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
GH + V+ C+ + G +VSGS L+ W TGK L GH TG W
Sbjct: 383 GHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-RTLVGH----TGGVWSSQMR 435
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+ +S S D ++W+ +C+ L GHT V C+ V+ +GS+D T++VW
Sbjct: 436 D---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 491
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK 325
+ G+ + L GH V + + +GA+D K + E L+ + N++
Sbjct: 492 DIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGHTNRVY 550
Query: 326 GNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +VSGS D ++ +W+ T +TGHQ L + + + + S + D +
Sbjct: 551 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTSGMELKDN--ILVSGNADST 607
Query: 384 IKLWNGTTGKFVAVFRG---HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
+K+W+ TG+ + +G H V + ++ + +++ S D T+K+WD++T + ++L
Sbjct: 608 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 665
Score = 234 (87.4 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 417 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 472
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 473 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 524
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 525 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 583
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 584 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 642
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 643 ITSSDDGTVKLWD 655
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 58/210 (27%), Positives = 101/210 (48%)
Query: 266 WETTQGKLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI 324
W + K + LKGH H + L + +G+ D+T K +S+ L +
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGG 428
Query: 325 KGNAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
++ R ++SGS D T+ +W + T + GH V ++ + V S S D
Sbjct: 429 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHT-LYGHTSTVRCMHLHE--KRVVSGSRD 485
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
++++W+ TG+ + V GHV V + + D R ++SG+ D +KVWD T+ L
Sbjct: 486 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ 543
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH + V+++ + DG V SG D +++W
Sbjct: 544 GHTNRVYSLQF--DGIHVVSGSLDTSIRVW 571
Score = 157 (60.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GHT V S+ F DG + SGS DT++R+WD+ T + TGH++ L
Sbjct: 538 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGME 593
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASK 218
LVSG+ ++ WD +TG+ L G K + ++ + N + FV ++S
Sbjct: 594 LKDNILVSGNADSTVKIWDIKTGQCL-QTLQGPNKHQSAVTC--LQFN---KNFVITSSD 647
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY 255
DG ++WD+ + + L VT G GV++
Sbjct: 648 DGTVKLWDLKTGEFIRNL------VTLESGGSGGVVW 678
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 257 (95.5 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 74/270 (27%), Positives = 126/270 (46%)
Query: 214 VSASKDGDARIWDVSLRKCVI--CLSGHTLAVTCVKWGGDGVIYTGSQ-DCTIKVWETTQ 270
V+ S D ++W S K + L GH L V V +G I S D I++W+
Sbjct: 36 VTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLET 95
Query: 271 GKLIRELKGH--GHWVNSLALSTEYALRTGAFDHTGKQ--YSSPEEMKKAALERYNKIK- 325
GK I+ + W + + ++Y + TG+ H GK + K+ +L+ K
Sbjct: 96 GKQIKSMDAGPVDAWTVAFSPDSKY-IATGS--HLGKVNIFGVESGKKEHSLDTRGKFIL 152
Query: 326 --GNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
+P+ L SG+ D + +++ A K T + GH + + FSPD Q + +AS D
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDIATGKLLHT-LEGHAMPIRSLTFSPDSQLLVTASDD 211
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
IK+++ GH V +++S D +S S D ++KVWD ++
Sbjct: 212 GYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFF 271
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H D+V++V ++P G K+ S G DR + ++
Sbjct: 272 DHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 239 (89.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 71/249 (28%), Positives = 122/249 (48%)
Query: 239 HTLAVTCVKWG-----GDGVIYTGSQDCTIKVWETTQGKLIRE--LKGHGHWVNSLALST 291
H A+ WG G I TGS D +KVW+ + KL + L+GH V S+ +S
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQ 74
Query: 292 EYALR-TGAFD-H-------TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
A+ + + D H TGKQ S M ++ + + + +GS +
Sbjct: 75 NGAIAASSSLDAHIRLWDLETGKQIKS---MDAGPVDAWTVAFSPDSKYIATGSHLGKVN 131
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
++ K+ + T + +++ Y SPDG+++AS + D I +++ TGK + GH
Sbjct: 132 IFGVESGKKEHSLDTRGKFILSIAY-SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 403 GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 462
P+ +++S DS+LL++ S D +K++D++ L L GH V +V +SPD S
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSS 250
Query: 463 GKDRVLKLW 471
D+ +K+W
Sbjct: 251 SSDKSIKVW 259
Score = 223 (83.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 59/193 (30%), Positives = 94/193 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSA 160
T+ GH V+SV S +G AS S D +RLWDL T Q W +A+S
Sbjct: 59 TLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWT--VAFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D K++ +GS G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSKYIATGSHLGKVNIFGVESGKKE-HSLDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLALSTE 292
HG WV S+A S +
Sbjct: 231 HGSWVLSVAFSPD 243
Score = 213 (80.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 50/158 (31%), Positives = 82/158 (51%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WD S R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHGSWVLSVAFSPDDTH-----FVSSSSDKSIKVWDTSSR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G I + D I +++
Sbjct: 265 SCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 176 (67.0 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 75/308 (24%), Positives = 133/308 (43%)
Query: 137 LNTQ-TPMFKCT-GHKNWVLCIAWSA---DGKH-LVSGSKAGELQCWDPQTGKPSGN-PL 189
++TQ + +FK H++ + AW DG +V+GS ++ W K L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTL 60
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
GH+ + ++ + N S+S D R+WD+ K + + + V +
Sbjct: 61 EGHQLGVVSVN---ISQNGAIA--ASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFS 115
Query: 250 GDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQY 307
D I TGS + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 116 PDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 308 SSPEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
LE + I+ +P+ LV+ SDD + +++ + T ++GH
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHGSW 234
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
V V FSPD S+S DKSIK+W+ ++ V F H V+ + ++ ++S
Sbjct: 235 VLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGD 294
Query: 423 DSTLKVWD 430
D + ++D
Sbjct: 295 DRAIHIYD 302
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+S D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD + + N H+ + + + P + VSA D
Sbjct: 245 THFVSSSSDKSIKVWDTSS-RSCVNTFFDHQDQVWSVKYNPTG-----SKIVSAGDDRAI 298
Query: 223 RIWD 226
I+D
Sbjct: 299 HIYD 302
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VLSVAFSPD S S D ++++WD ++++ + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ G +VS + +D
Sbjct: 275 DQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 274 (101.5 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 93/326 (28%), Positives = 145/326 (44%)
Query: 79 EKVLSIVYQPQAVFRIRPVN-----RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVR 133
+K S++ +P A R +P + I+GH V S+A P+ ASG+GD T++
Sbjct: 110 DKPTSLIQRPSAT-RQQPPEWHAPWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIK 168
Query: 134 LWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+W+L T TGH + V +A S +L S + ++CWD +T K + GH
Sbjct: 169 IWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRH-YHGHL 227
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDG 252
+ ++ P L+ V+ +DG AR+WD+ R + LSGHT V V+ D
Sbjct: 228 SGVYTLALHP-RLDL----LVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADP 282
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+ TGS D T+++W+ GK + L H + SLA A + KQ+ P
Sbjct: 283 QVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGG 342
Query: 313 MKKAALERYNKIKG----NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ--QL---- 362
E +N I N L SG D+ +M W+ + +T T Q L
Sbjct: 343 EFMQNFEGHNAIINTLSVNEDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEA 402
Query: 363 -VNHVYFSPDGQWVASASFDKSIKLW 387
+ F G + + DK+IK+W
Sbjct: 403 GIMTSTFDRTGLRLITGEADKTIKVW 428
Score = 208 (78.3 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 73/298 (24%), Positives = 130/298 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ ++ EP + F S + D +IW+++ + L+GH V +
Sbjct: 139 ISGHLGWVRSLAVEPNN-----EWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAV 193
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V +LAL L TG D +
Sbjct: 194 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARV 253
Query: 307 YSSPEEMKKAALERYNKIKGN-----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ L + + A ++++GS D T+ LW+ A K +T H++
Sbjct: 254 WDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGV-LTHHKK 312
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
+ + P ASAS SIK W G+F+ F GH + +S + D+ +L SG
Sbjct: 313 GIRSLATHPREFTFASASTG-SIKQWKCPGGEFMQNFEGHNAIINTLSVNEDN-VLFSGG 370
Query: 422 KDSTLKVWDIRTQKLKQDL-----PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ ++ WD +T Q + PG + + + G ++ +G D+ +K+W
Sbjct: 371 DNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLITGEADKTIKVW 428
Score = 192 (72.6 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 64/265 (24%), Positives = 119/265 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH V +A SP L S D V+ WDL T + GH + V +A
Sbjct: 180 TLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRL 239
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+G + G + WD +T + + + LSGH + + + P + ++ S D
Sbjct: 240 DLLVTGGRDGVARVWDMRT-RSNIHVLSGHTGTVADVQCQEAD---P--QVITGSLDATV 293
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
R+WD++ K + L+ H + + + + +IK W+ G+ ++ +GH
Sbjct: 294 RLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGGEFMQNFEGHNA 353
Query: 283 WVNSLALSTEYALRTGA-------FD-HTGKQYSSPEEMKK-AALERYNKIKGNAPER-- 331
+N+L+++ + L +G +D TG +Y + + + +LE I + +R
Sbjct: 354 IINTLSVNEDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTG 413
Query: 332 --LVSGSDDFTMFLWEPAVSKQPKT 354
L++G D T+ +W+ P+T
Sbjct: 414 LRLITGEADKTIKVWKQDDQATPET 438
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
K + V GH+G V ++ ++ SG+ D T+K+W++ T L+ L GH V +
Sbjct: 134 KLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAV 193
Query: 453 SPDGEKVASGGKDRVLKLW 471
SP + S G+D+++K W
Sbjct: 194 SPRHPYLFSCGEDKMVKCW 212
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 280 (103.6 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 91/336 (27%), Positives = 163/336 (48%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 429 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 482
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 483 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 534
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 535 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 593
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 594 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 652
Query: 338 DFTMFLWEPAVSKQPKTRMTG---HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
D T+ +W+ + +T + G HQ V + F+ + +V ++S D ++KLW+ TG+F
Sbjct: 653 DSTVKIWDIKTGQCLQT-LQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRTGEF 709
Query: 395 VAVF-----RGHVGPVYQISWSADSRLLLSGSKDST 425
+ G G V++I S + GS++ T
Sbjct: 710 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 745
Score = 275 (101.9 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 84/269 (31%), Positives = 123/269 (45%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 446 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 504
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 505 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 563
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 564 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 617
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG--- 442
+W+ TG + GH +L+SG+ DST+K+WDI+T + Q L G
Sbjct: 618 VWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHK 675
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V + ++ + V + D +KLW
Sbjct: 676 HQSAVTCLQFNKNF--VITSSDDGTVKLW 702
Score = 263 (97.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 85/319 (26%), Positives = 150/319 (47%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN 187
DT R DL + + GH + V+ C+ + G +VSGS L+ W TGK
Sbjct: 415 DTNWRRGDLKSPKVL---KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCL-R 468
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L GH TG W + +S S D ++W+ +C+ L GHT V C+
Sbjct: 469 TLVGH----TGGVWSSQMRD---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 521
Query: 248 WGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY 307
V+ +GS+D T++VW+ G+ + L GH V + + +GA+D K +
Sbjct: 522 LHEKRVV-SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVW 579
Query: 308 SSPEEMKKAALERY-NKIKGNAPE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
E L+ + N++ + +VSGS D ++ +W+ T +TGHQ L +
Sbjct: 580 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTS 638
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG---HVGPVYQISWSADSRLLLSGS 421
+ + + S + D ++K+W+ TG+ + +G H V + ++ + +++ S
Sbjct: 639 GMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSS 694
Query: 422 KDSTLKVWDIRTQKLKQDL 440
D T+K+WD+RT + ++L
Sbjct: 695 DDGTVKLWDLRTGEFIRNL 713
Score = 229 (85.7 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 465 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 520
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 521 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 572
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 573 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 631
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ +K + +
Sbjct: 632 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFV 690
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 691 ITSSDDGTVKLWD 703
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GHT V S+ F DG + SGS DT++R+WD+ T + TGH++ L
Sbjct: 586 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGME 641
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASK 218
LVSG+ ++ WD +TG+ L G K + ++ + N + FV ++S
Sbjct: 642 LKDNILVSGNADSTVKIWDIKTGQCL-QTLQGPHKHQSAVTC--LQFN---KNFVITSSD 695
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY 255
DG ++WD+ + + L VT G GV++
Sbjct: 696 DGTVKLWDLRTGEFIRNL------VTLESGGSGGVVW 726
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 255 (94.8 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 54/150 (36%), Positives = 87/150 (58%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P L+SGS D T+ +W +Q PK + GH +V+ S DG + SAS+DKS+
Sbjct: 28 PNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW ++G+ F GH V +S+SAD+R ++SGS+D T+K+W+ + K GH
Sbjct: 88 RLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
+ V V +SP+ + + S G D+++K+W
Sbjct: 148 TEWVSCVRFSPNPQNPVIVSAGWDKLVKVW 177
Score = 215 (80.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 70/237 (29%), Positives = 115/237 (48%)
Query: 236 LSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQ-----GKLIRELKGHGHWVNSLA 288
L GH VT + ++ +GS+D T+ +W T+ G R L+GH H V+
Sbjct: 11 LEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCV 70
Query: 289 LSTE--YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG---NAPER-LVSGSDDFTM 341
+S++ YAL + ++D + + + S + + + N + +A R +VSGS D T+
Sbjct: 71 ISSDGAYAL-SASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTI 129
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFR 399
LW + GH + V+ V FSP+ Q + SA +DK +K+W + +
Sbjct: 130 KLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHI 189
Query: 400 GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA-DEVFAVDWSPD 455
GH G + ++ S D L SG KD +WD+ K L HA DE+ A+ +SP+
Sbjct: 190 GHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSL--HAGDEIHALVFSPN 244
Score = 201 (75.8 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 66/248 (26%), Positives = 113/248 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ V S DG S S D ++RLW+L++ GH N VL +++SAD
Sbjct: 58 SLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADN 117
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSGS+ ++ W+ GH +W++ + + P N P VSA D
Sbjct: 118 RQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQN-PV--IVSAGWDKLV 174
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W+++ + GHT + V DG + +G +D +W+ + K + L G
Sbjct: 175 KVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHA-G 233
Query: 282 HWVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVS 334
+++L S Y L T + FD K S +E+K +E+ K + L
Sbjct: 234 DEIHALVFSPNRYWLCAATSSSITIFDLEKK--SKVDELKPEYIEKGKKSREPECVSLAW 291
Query: 335 GSDDFTMF 342
+D T+F
Sbjct: 292 SADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 79/312 (25%), Positives = 135/312 (43%)
Query: 148 GHKNWVLCIAWSADGKH-LVSGSKAGELQCW----DPQT-GKPSGNPLSGHKKWITGISW 201
GH WV +A S + + L+SGS+ L W D Q G P + L GH ++
Sbjct: 13 GHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRS-LEGHSHIVSDCV- 70
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQD 260
+++ +SAS D R+W++S + GHT V V + D I +GS+D
Sbjct: 71 ----ISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRD 126
Query: 261 CTIKVWETTQG-KLIRELKGHGHWVNSLALSTEY---ALRTGAFDHTGKQY---SSPEEM 313
TIK+W T K KGH WV+ + S + + +D K + S +
Sbjct: 127 RTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQT 186
Query: 314 KKAALERYNKIKGNAPERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD 371
Y +P+ + SG D LW+ SK + G + ++ + FSP+
Sbjct: 187 DHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDE--IHALVFSPN 244
Query: 372 GQWVASAS------FD--KSIKLWNGTTGKFVAVFRGHVGP-VYQISWSADSRLLLSGSK 422
W+ +A+ FD K K+ + +++ + P ++WSAD + L +G
Sbjct: 245 RYWLCAATSSSITIFDLEKKSKV-DELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDIRTQ 434
D+ ++ W + ++
Sbjct: 304 DNKIRAWGVMSR 315
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 69/267 (25%), Positives = 124/267 (46%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T ++ L P +S S+D IW+++ + L GH+ V
Sbjct: 11 LEGHNGWVTSLA---TSLENP-NMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIV 66
Query: 244 T-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ CV + S D ++++WE + G+ R GH + V S++ S + + +G+ D
Sbjct: 67 SDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRD 126
Query: 302 HTGKQYSSPEEMK-----KAALERYNKIKGNA-PER--LVSGSDDFTMFLWEPAVSKQPK 353
T K +++ + K K E + ++ + P+ +VS D + +WE A S + +
Sbjct: 127 RTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELA-SCRLQ 185
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP-VYQISWSA 412
T GH +N V SPDG AS D LW+ K + + H G ++ + +S
Sbjct: 186 TDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHL--YSLHAGDEIHALVFSP 243
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQD 439
+ R L + S++ ++D+ +K K D
Sbjct: 244 N-RYWLCAATSSSITIFDLE-KKSKVD 268
Score = 169 (64.5 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 64/256 (25%), Positives = 120/256 (46%)
Query: 236 LSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ CV + S D ++++WE + G+ R GH + V S++ S +
Sbjct: 59 LEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNR 118
Query: 295 -LRTGAFDHTGKQYSSPEEMK-----KAALERYNKIKGNA-PER--LVSGSDDFTMFLWE 345
+ +G+ D T K +++ + K K E + ++ + P+ +VS D + +WE
Sbjct: 119 QIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWE 178
Query: 346 PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP- 404
A S + +T GH +N V SPDG AS D LW+ K + + H G
Sbjct: 179 LA-SCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHL--YSLHAGDE 235
Query: 405 VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL-PGHAD--------EVFAVDWSPD 455
++ + +S + R L + S++ ++D+ + +L P + + E ++ WS D
Sbjct: 236 IHALVFSPN-RYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSAD 294
Query: 456 GEKVASGGKDRVLKLW 471
G+ + +G D ++ W
Sbjct: 295 GQTLFAGYTDNKIRAW 310
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 273 (101.2 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 83/289 (28%), Positives = 140/289 (48%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK IT + + P ++ +AS D +W+ + GH VT V++
Sbjct: 16 GHKAAITSVDFSPSG-----KQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSP 70
Query: 251 DG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQY 307
G ++ + S+D T+++W +GK E K H V S+ S + L T + D + K +
Sbjct: 71 LGNLLASASRDRTVRLWIPDKRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 308 SSPEEMKKAALERYN---KIKGNAPE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ + +L R+ + +P+ RL VS S+D T+ +W+ +KQ +
Sbjct: 130 NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TTNKQCVNNFSDSVGF 188
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
N V F+P+G +ASA D ++K+W+ K + ++ H G V +S+ +++ S
Sbjct: 189 ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASS 248
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D TLK+ D+ +L L GH VF V +S GE +SGG D + LW
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 262 (97.3 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 81/293 (27%), Positives = 135/293 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ SV FSP G+QLA+ S DT + LW+ Q F+ GHK+ V + +S G L
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + +AS+D ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKSS--EFKAHTAPVRSVDF-----SADGQFLATASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W++ ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N + + + + DHT K + + K L+ Y G P +++
Sbjct: 189 ANFVDFNPNGTCIASAGSDHTVKIWDI--RVNKL-LQHYQVHSGGVNCVSFHPSGNYIIT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ +S D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 249 (92.7 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 70/228 (30%), Positives = 111/228 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ LA+ S D ++++W++ Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + + + P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+IWD+ + K + H+ V CV + G I T S D T+K+ + +G+LI L+G
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQG 268
Query: 280 HGHWVNSLALSTEYAL-RTGAFD------HTGKQYSSPEEMKKAALER 320
H V +++ S L +G D T Y + ++M K L+R
Sbjct: 269 HTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMIKRNLKR 316
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH + + +S + L + S D+ L +W+ + Q GH D V +V +SP G
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGN 73
Query: 458 KVASGGKDRVLKLWM 472
+AS +DR ++LW+
Sbjct: 74 LLASASRDRTVRLWI 88
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 275 (101.9 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 76/251 (30%), Positives = 125/251 (49%)
Query: 239 HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR----ELKGHGH-WVNSLALSTE- 292
H V CV + DG + + ++++ GK + E + G ++ S+ S +
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDG 339
Query: 293 YALRTGAFDHTGKQYS-SPEEMKKA----ALERYNKIKGNAPERLVSGSDDFTMFLWEPA 347
L TGA D T K + ++++ L+ Y+ + +VSGS D +W+
Sbjct: 340 NYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIE 399
Query: 348 VSKQPKT---RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP 404
K T G + V V SPDG+ VA+ S D ++LW+ TG F+ + GH+
Sbjct: 400 KGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDS 459
Query: 405 VYQISWSADSRLLLSGSKDSTLKVWDI---RTQ-KLKQDLPGHADEVFAVDWSPDGEKVA 460
VY +++S D + L SGS D +LK+WD+ R++ + + GH D V +V +SPDG +
Sbjct: 460 VYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLI 519
Query: 461 SGGKDRVLKLW 471
SG KDR ++ W
Sbjct: 520 SGSKDRSVQFW 530
Score = 254 (94.5 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 81/302 (26%), Positives = 141/302 (46%)
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKK----WITGISWEPV 204
H + V C+ +S DGK+L +G Q +D TGK + +K +I + + P
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSP- 337
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
+ ++D ++WD+ +K GH L + + + DG I +GS D
Sbjct: 338 ----DGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKA 393
Query: 264 KVWETTQGK----LIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPE----EMK 314
K+W+ +GK L E G + V S+A+S + L G+ D+ + + + E
Sbjct: 394 KIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERY 453
Query: 315 KAALER-YNKIKGNAPERLVSGSDDFTMFLWEPAVSK-QPKTRMT--GHQQLVNHVYFSP 370
+ L+ Y+ + L SGS D ++ LW+ + S+ + + R T GH+ V V FSP
Sbjct: 454 EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP 513
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSR---LLLSGSKDSTLK 427
DG W+ S S D+S++ W+ G + +GH V ++ S + + +GS D +
Sbjct: 514 DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSR 573
Query: 428 VW 429
+W
Sbjct: 574 LW 575
Score = 242 (90.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 84/251 (33%), Positives = 123/251 (49%)
Query: 241 LAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTG 298
L + V + DG + TG++D T+KVW+ K+ GH + SL S++ + +G
Sbjct: 328 LYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSG 387
Query: 299 AFDHTGKQYSSPEEMKKAALERYNKIKG--N-------APE-RLVS-GSDDFTMFLWEPA 347
+ D K + E K A N+ G N +P+ RLV+ GS D + LW+ A
Sbjct: 388 SGDKKAKIWDI--EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWD-A 444
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN--GTTGKFV--AVFRGHVG 403
+ R GH V V FSPDG+ +AS S DKS+KLW+ G+ + A F GH
Sbjct: 445 QTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD 504
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEK---VA 460
V +++S D L+SGSKD +++ WD R L GH + V +V SP A
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFA 564
Query: 461 SGGKDRVLKLW 471
+G D +LW
Sbjct: 565 TGSGDFRSRLW 575
Score = 237 (88.5 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 71/252 (28%), Positives = 121/252 (48%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+ SV FSPDG LA+G+ D TV++WD++T+ GH+ + + +S+DG+ +VSGS
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 171 AGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
+ + WD + GK + GN G K +T ++ P R + S D R+WD
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSP-----DGRLVAAGSLDNIVRLWDA 444
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT----QGKLIRELKGHGH 282
+ GH +V V + DG + +GS D ++K+W+ + + + GH
Sbjct: 445 QTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD 504
Query: 283 WVNSLALSTEYA-LRTGAFDHT--------GKQYSSPEEMKKAALERYNKIKGNAPERLV 333
+V S+A S + + L +G+ D + G + + K + + K N+
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFA 564
Query: 334 SGSDDFTMFLWE 345
+GS DF LW+
Sbjct: 565 TGSGDFRSRLWK 576
Score = 224 (83.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 81/304 (26%), Positives = 140/304 (46%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKN---WVLCIAWSAD 161
H V V FS DG+ LA+G + + +++D++T + F K+ ++ + +S D
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G +L +G++ ++ WD T K + GH+ I + + ++ R VS S D
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQ-HTFYGHELDIYSLDY-----SSDGRFIVSGSGDKK 392
Query: 222 ARIWDVSLRKCVICLSGHTLA----VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
A+IWD+ KC L + VT V DG ++ GS D +++W+ G +
Sbjct: 393 AKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLER 452
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIK------GNA 328
+GH V S+A S + +L +G+ D + K + S + +N K +
Sbjct: 453 YEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 329 PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP--DGQWV-ASASFDKS 383
P+ L+SGS D ++ W+P + + GH+ V V SP + V A+ S D
Sbjct: 513 PDGSWLISGSKDRSVQFWDPR-NGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFR 571
Query: 384 IKLW 387
+LW
Sbjct: 572 SRLW 575
Score = 218 (81.8 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 60/197 (30%), Positives = 94/197 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGHKNWVLCIAW 158
T GH + S+ +S DGR + SGSGD ++WD+ F G KN V +A
Sbjct: 364 TFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAM 423
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S DG+ + +GS ++ WD QTG GH + +++ P + S S
Sbjct: 424 SPDGRLVAAGSLDNIVRLWDAQTGYFLER-YEGHLDSVYSVAFSP-----DGKSLASGSL 477
Query: 219 DGDARIWDVS----LRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKL 273
D ++WD+S +C +GH V V + DG + +GS+D +++ W+ G
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTT 537
Query: 274 IRELKGHGHWVNSLALS 290
L+GH + V S+ALS
Sbjct: 538 HMMLQGHKNSVISVALS 554
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 60/180 (33%), Positives = 85/180 (47%)
Query: 99 RCSATIA----GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+C+ T+ G V SVA SPDGR +A+GS D VRLWD T + + GH + V
Sbjct: 402 KCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVY 461
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN---PLSGHKKWITGISWEPVHLNAPCR 211
+A+S DGK L SGS L+ WD + +GHK ++ +++ P
Sbjct: 462 SVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP-----DGS 516
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV----KWGGDGVIYTGSQDCTIKVWE 267
+S SKD + WD + L GH +V V K GV TGS D ++W+
Sbjct: 517 WLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 160 (61.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/82 (43%), Positives = 47/82 (57%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
R +RC AT GH + VLSVAFSPDG L SGS D +V+ WD T GHKN V+
Sbjct: 490 RSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVI 549
Query: 155 CIAWSA-DGKHLVSGSKAGELQ 175
+A S + H V + +G+ +
Sbjct: 550 SVALSPKNNSHGVFATGSGDFR 571
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 254 (94.5 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 62/196 (31%), Positives = 98/196 (50%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 20 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 79
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 80 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 132
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 133 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 192
Query: 281 GHWVNSLALS-TEYAL 295
VN + EY L
Sbjct: 193 TGPVNVVEFHPNEYLL 208
Score = 206 (77.6 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 58/189 (30%), Positives = 96/189 (50%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
+ E+ H V+SL L ++ L TG D +S + +L + ++ N
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D +IKL
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKL 135
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ V +RGH V + +S D + L S + D T+K+WD+ K+ + PGH
Sbjct: 136 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 195
Query: 447 VFAVDWSPD 455
V V++ P+
Sbjct: 196 VNVVEFHPN 204
Score = 204 (76.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 59/173 (34%), Positives = 82/173 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 97
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 98 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 155
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLL 417
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + + + LL
Sbjct: 156 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 208
Score = 192 (72.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 49/164 (29%), Positives = 81/164 (49%)
Query: 311 EEMKKAALERYNKIKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTRM--TGHQQLVNHVY 367
EE+ A + + G A RL++ G DD + LW +++K P M TGH V V
Sbjct: 18 EEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLW--SINK-PNCIMSLTGHTSPVESVR 74
Query: 368 FSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLK 427
+ + + + S SI++W+ K + GH + + + + SGS+D+ +K
Sbjct: 75 LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIK 134
Query: 428 VWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+WDIR + GH+ V + +SPDG+ +AS D +KLW
Sbjct: 135 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 178
Score = 165 (63.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 104 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 163
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
K L S + ++ WD GK GH + + + P
Sbjct: 164 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHP 203
Score = 138 (53.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C ++ GHT V SV + + +GS ++R+WDL + GHK + + +
Sbjct: 59 CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH 118
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
G+ + SGS+ ++ WD + K GH + + + + P + SA+ D
Sbjct: 119 PYGEFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSP-----DGKWLASAADD 172
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKW 248
++WD++ K + GHT V V++
Sbjct: 173 HTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 175 (66.7 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 46/151 (30%), Positives = 70/151 (46%)
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
LA G D +++WDL ++T + GHK + + + G L+SGSK + WD G
Sbjct: 94 LAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWD-LVG 152
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRR---FVSASKDGDARIWDVSLRKCVICLSGH 239
+ L HK ITG W C+ +S SKDG ++WD+ +C+ H
Sbjct: 153 EVGLYKLRSHKDSITGF-W--------CQGEDWLISTSKDGMIKLWDLKTHQCIETHIAH 203
Query: 240 TLAVTCVKWG---GDGVIYTGSQDCTIKVWE 267
T C WG D ++ T D +K+W+
Sbjct: 204 T--GEC--WGLAVKDDLLITTGTDSQVKIWK 230
Score = 170 (64.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 62/233 (26%), Positives = 98/233 (42%)
Query: 108 TEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVS 167
T+ +L V SPD R LA D TV+++ L++ GHK VL I S D K +++
Sbjct: 531 TDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIIT 590
Query: 168 GSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
S ++ W G L H+ I + + P N F S SKD + WD
Sbjct: 591 SSADKNIKIWGLDFGD-CHKSLFAHQDSIMNVKFLPQSHN-----FFSCSKDAVVKYWDG 644
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNS 286
+C+ L H V + DG + + S D +I++WE T+ ++ E +
Sbjct: 645 EKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWEETEDQVFLEEEKEKELEEQ 704
Query: 287 LALSTEYALRTGAFDHTGKQYSSPE--EMKKAALERYNKIKGNAPERLVSGSD 337
+ +L G D K +S E E + + + + A ERL+ D
Sbjct: 705 YEDTLLTSLEEGNGDDAFKADASGEGVEDEASGVHKQTLESLKAGERLMEALD 757
Score = 157 (60.3 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 45/159 (28%), Positives = 75/159 (47%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQ--PKTR------MTGHQ----QLVNHVY---FSPDGQW 374
+RLV+GS D T+ W+ V P T+ + H +L + + SPD ++
Sbjct: 486 KRLVTGSADKTVKFWDFKVENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRY 545
Query: 375 VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ 434
+A + D ++K++ + KF GH PV I S DS+++++ S D +K+W +
Sbjct: 546 LAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFG 605
Query: 435 KLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
+ L H D + V + P S KD V+K W G
Sbjct: 606 DCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDG 644
Score = 136 (52.9 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLL 417
GH+ V + S D + + ++S DK+IK+W G H + + + S
Sbjct: 571 GHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNF 630
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S SKD+ +K WD + Q L H EV+A+ + DG V S D +++W
Sbjct: 631 FSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIW 684
Score = 129 (50.5 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 31/127 (24%), Positives = 64/127 (50%)
Query: 346 PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
PA K + G + V + S D + +A+AS + S+K+WN T K + F G
Sbjct: 377 PAPLKTHTIELQGQRTDVRSIDISDDNKLLATAS-NGSLKIWNIKTHKCIRTFE--CGYA 433
Query: 406 YQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP-GHADEVFAVDWSPDGEKVASGGK 464
+ L++ G+++ L+++D+ + L + H ++++D + DG+++ +G
Sbjct: 434 LTCKFLPGGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSA 493
Query: 465 DRVLKLW 471
D+ +K W
Sbjct: 494 DKTVKFW 500
Score = 127 (49.8 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 69 SYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIA--GHTEAVLSVAFSPDGRQLASG 126
+YLE HK + +L++ Y V ++ + + + GH A+ + F G +L SG
Sbjct: 83 TYLEAHKDT--DLLAVGYA-DGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISG 139
Query: 127 SGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSG 186
S D+ + +WDL + ++K HK+ + W L+S SK G ++ WD +T +
Sbjct: 140 SKDSNIIVWDLVGEVGLYKLRSHKDSITGF-WCQGEDWLISTSKDGMIKLWDLKTHQCIE 198
Query: 187 NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSL 229
++ H TG W L ++ D +IW + +
Sbjct: 199 THIA-H----TGECWG---LAVKDDLLITTGTDSQVKIWKLDI 233
Score = 122 (48.0 bits), Expect = 0.00062, P = 0.00062
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN--G 389
L G D + +W+ +SK GH+ + + F G + S S D +I +W+ G
Sbjct: 94 LAVGYADGVIKVWD-LMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVG 152
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
G + R H + W L+S SKD +K+WD++T + + H E +
Sbjct: 153 EVGLYK--LRSHKDSITGF-WCQGEDWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWG 209
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
+ D + + G D +K+W
Sbjct: 210 LAVKDD--LLITTGTDSQVKIW 229
Score = 99 (39.9 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+++ S D + +W K+ + HQ + +V F P S S D +K W+G
Sbjct: 588 IITSSADKNIKIWGLDFGDCHKS-LFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDGEK 646
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
+ + H V+ ++ + D ++S S D ++++W+
Sbjct: 647 FECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWE 685
Score = 99 (39.9 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 47/203 (23%), Positives = 88/203 (43%)
Query: 91 VFRIRPVNRCSATI-AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-G 148
++ I+ ++C T G+ L+ F P G + G+ + ++L+DL + + +
Sbjct: 416 IWNIK-THKCIRTFECGYA---LTCKFLPGGLLVILGTRNGELQLFDLASSSLLDTIEDA 471
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWD--------PQTGKPSGNPLSGHKKWITGIS 200
H + + ++DGK LV+GS ++ WD P T L H ++
Sbjct: 472 HDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVENSLVPGTKNKFLPVLKLHHDTTLELT 531
Query: 201 WEPVHLN-APCRRFVSASK-DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTG 257
+ + + +P R+++ S D +++ + K + L GH L V + D +I T
Sbjct: 532 DDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITS 591
Query: 258 SQDCTIKVWETTQGKLIRELKGH 280
S D IK+W G + L H
Sbjct: 592 SADKNIKIWGLDFGDCHKSLFAH 614
Score = 95 (38.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 51/200 (25%), Positives = 81/200 (40%)
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L G G ++ WD + N +GHK IT + ++ R +S SKD + +
Sbjct: 94 LAVGYADGVIKVWDLMSKTVLLN-FNGHKAAITLLQFDGTGT-----RLISGSKDSNIIV 147
Query: 225 WDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
WD+ + L H ++T W G D +I T S+D IK+W+ + I H
Sbjct: 148 WDLVGEVGLYKLRSHKDSITGF-WCQGEDWLIST-SKDGMIKLWDLKTHQCIETHIAHTG 205
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA--------LERYNKIKGNAPERLVS 334
LA+ + + TG D K + E K E+ +K +G E ++
Sbjct: 206 ECWGLAVKDDLLITTGT-DSQVKIWKLDIENDKMGGKLTEMGIFEKQSKQRGLKIE-FIT 263
Query: 335 GSDDFTMFLWEPAVSKQPKT 354
S D T F + K +T
Sbjct: 264 NSSDKTSFFYIQNADKTIET 283
Score = 79 (32.9 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 22/97 (22%), Positives = 51/97 (52%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLS-GHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQ 270
+ ++ + +G +IW++ KC+ G+ A+TC G ++ G+++ +++++
Sbjct: 404 KLLATASNGSLKIWNIKTHKCIRTFECGY--ALTCKFLPGGLLVILGTRNGELQLFDLAS 461
Query: 271 GKLIRELK-GHGHWVNSLALSTE-YALRTGAFDHTGK 305
L+ ++ H + SL L+++ L TG+ D T K
Sbjct: 462 SSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVK 498
Score = 78 (32.5 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 20/105 (19%), Positives = 49/105 (46%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
+L++ + + ++ +W K +T G+ F P G V + + ++L++
Sbjct: 404 KLLATASNGSLKIWNIKTHKCIRTFECGYALTCK---FLPGGLLVILGTRNGELQLFDLA 460
Query: 391 TGKFVAVFR-GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ 434
+ + H ++ + ++D + L++GS D T+K WD + +
Sbjct: 461 SSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVE 505
Score = 67 (28.6 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 37/155 (23%), Positives = 63/155 (40%)
Query: 243 VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAF 300
+ CV+ D + D T+KV+ K L GH V S+ +S + + T +
Sbjct: 534 ILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSA 593
Query: 301 DHTGKQYSSP-EEMKKAALERYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTR 355
D K + + K+ + I P+ S S D + W+ + +
Sbjct: 594 DKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWD-GEKFECIQK 652
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
+ HQ V + + DG +V S+S D SI++W T
Sbjct: 653 LYAHQSEVWALAVATDGGFVVSSSHDHSIRIWEET 687
Score = 66 (28.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 31/130 (23%), Positives = 58/130 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+T + G + V I S D K L + S G L+ W+ +T K G+ +T
Sbjct: 381 KTHTIELQGQRTDVRSIDISDDNKLLATASN-GSLKIWNIKTHKCIRTFECGYA--LT-C 436
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS-GHTLAVTCVKWGGDGV-IYTG 257
+ P L + +++G+ +++D++ + + H A+ + DG + TG
Sbjct: 437 KFLPGGLLV-----ILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTG 491
Query: 258 SQDCTIKVWE 267
S D T+K W+
Sbjct: 492 SADKTVKFWD 501
Score = 52 (23.4 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 29/124 (23%), Positives = 47/124 (37%)
Query: 229 LRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK-GHGHWVNSL 287
L+ I L G V + D + + + ++K+W K IR + G+ L
Sbjct: 380 LKTHTIELQGQRTDVRSIDISDDNKLLATASNGSLKIWNIKTHKCIRTFECGYALTCKFL 439
Query: 288 --ALSTEYALRTGA---FDHTGKQY-SSPEEMKKAALERYNKIKGNAPERLVSGSDDFTM 341
L R G FD + E+ AA+ + +RLV+GS D T+
Sbjct: 440 PGGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDG--KRLVTGSADKTV 497
Query: 342 FLWE 345
W+
Sbjct: 498 KFWD 501
Score = 48 (22.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 23/98 (23%), Positives = 39/98 (39%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPE 311
++ G D IKVW+ ++ GH + L T L +G+ D +
Sbjct: 93 LLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVG 152
Query: 312 EMKKAALERY-NKIKG---NAPERLVSGSDDFTMFLWE 345
E+ L + + I G + L+S S D + LW+
Sbjct: 153 EVGLYKLRSHKDSITGFWCQGEDWLISTSKDGMIKLWD 190
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 275 (101.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 80/313 (25%), Positives = 149/313 (47%)
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K++V+ ++ +D T + L GH + G+ W V + VS D +
Sbjct: 264 KYIVASLDNAKIHVYD--TNGENQKTLEGH---VMGV-WAMVPWD---NILVSGGCDREV 314
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
R+W+++ + + L GHT V C+K +GS+D T+++W+ G L GH
Sbjct: 315 RVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQA 374
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE-RYNKIKGNAPE--RLVSGSDDF 339
V LA+ + + +G++D T + +S E AL +++I A + R+ +GS D
Sbjct: 375 SVRCLAVHGDIVV-SGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRRIATGSLDT 433
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR 399
++ +W+P Q + GH LV + S G + + D S+++W+ T +
Sbjct: 434 SVRIWDPNTG-QCHAILQGHTSLVGQLQMS--GDTLVTGGSDGSVRVWSLTRMAPIHRLA 490
Query: 400 GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 459
H V + + D+ ++SG D +KVW +RT +L ++L +D V+ V + + +
Sbjct: 491 AHDNSVTSLQF--DNNRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVI 548
Query: 460 ASGGKDR-VLKLW 471
S R V+++W
Sbjct: 549 MSSRSGRTVMEVW 561
Score = 231 (86.4 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 65/196 (33%), Positives = 91/196 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GHT V + S D SGS DTT+R+WDL T T GH+ V C+A G
Sbjct: 328 LRGHTSTVRCLKMS-DKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLA--VHGD 384
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS + W G+ LSGH I I+++ RR + S D R
Sbjct: 385 IVVSGSYDTTARVWSISEGRFL-RALSGHFSQIYAIAFDG-------RRIATGSLDTSVR 436
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
IWD + +C L GHT V ++ GD ++ TG D +++VW T+ I L H +
Sbjct: 437 IWDPNTGQCHAILQGHTSLVGQLQMSGDTLV-TGGSDGSVRVWSLTRMAPIHRLAAHDNS 495
Query: 284 VNSLALSTEYALRTGA 299
V SL + G+
Sbjct: 496 VTSLQFDNNRIVSGGS 511
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C A + GHT V + S D L +G D +VR+W L P+ + H N V + +
Sbjct: 444 QCHAILQGHTSLVGQLQMSGD--TLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQF 501
Query: 159 SADGKHLVSGSKAGELQCWDPQTGK 183
D +VSG G ++ W +TG+
Sbjct: 502 --DNNRIVSGGSDGRVKVWCLRTGQ 524
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 277 (102.6 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+ V S +FSPD + L SGS D TVRLW ++T T + GH + V +++S G
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + S + W P +GH + +S+ P N C F +S D
Sbjct: 580 HYFATASHDQTARLWSCDHIYPL-RIFAGHLNDVDCVSFHP---NG-CYVFTGSS-DKTC 633
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+WDVS V GHT V + DG + TGS+D I VW+ GK +++++GHG
Sbjct: 634 RMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHG 693
Query: 282 -HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALE 319
+ + SL+ S E L +G DHT + + ++KKA E
Sbjct: 694 KNAIYSLSYSKEGNVLISGGADHTVRVW----DLKKATTE 729
Score = 232 (86.7 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 61/204 (29%), Positives = 101/204 (49%)
Query: 275 RELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---AP- 329
+ L GH V S + S + L +G+ D T + +S + + +N + +P
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 330 -ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ S D T LW P GH V+ V F P+G +V + S DK+ ++W+
Sbjct: 579 GHYFATASHDQTARLWS-CDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD 637
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA-DEV 447
+TG V +F GH PV I+ D R L +GS+D + VWDI T K + + GH + +
Sbjct: 638 VSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAI 697
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
+++ +S +G + SGG D +++W
Sbjct: 698 YSLSYSKEGNVLISGGADHTVRVW 721
Score = 220 (82.5 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 63/222 (28%), Positives = 105/222 (47%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST-EY 293
L GH+ V + D + +GS+D T+++W + KGH H V ++ S +
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 294 ALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPERLV-SGSDDFTMFLWEPAV 348
T + D T + +S P + L + + + V +GS D T +W+ V
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD--V 638
Query: 349 SKQPKTRM-TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH-VGPVY 406
S R+ GH V + PDG+W+++ S D I +W+ TGK + RGH +Y
Sbjct: 639 STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIY 698
Query: 407 QISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
+S+S + +L+SG D T++VWD++ K + DE F
Sbjct: 699 SLSYSKEGNVLISGGADHTVRVWDLK--KATTEPSAEPDEPF 738
Score = 57 (25.1 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 27/122 (22%), Positives = 49/122 (40%)
Query: 29 FPQNAGPQQLSQIVNKLLNNEEKLPYAFYIS----DHELLVPLGSYLE-KHKVSVEKVLS 83
F N G +I +K+ +EEK + D L P L K +++ L
Sbjct: 375 FKDNTGDDDKDKIKDKIAKDEEKKESELKVDGEKKDSNLSSPARDILPLPPKTALDLKLE 434
Query: 84 I--VYQPQAVFRIRPVNR-----CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
I V + + ++ + C T + + + FS D R A+G D+ +++W
Sbjct: 435 IQKVKESRDAIKLDNLQLALPSVCMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWS 494
Query: 137 LN 138
L+
Sbjct: 495 LD 496
Score = 43 (20.2 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 232 CVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVW 266
C+ ++C+ + D + G QD IK+W
Sbjct: 458 CMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIW 493
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 275 (101.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 75/221 (33%), Positives = 109/221 (49%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + + + LL SGS D
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 425 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
T++ WD+ ++ + G V +V ++PDG + SG +D
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 241 (89.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 64/205 (31%), Positives = 106/205 (51%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
++E+ H V+SL L ++ L TG D +S + +L + ++ N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D +IKL
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ V +RGH V + +S D + L S + D T+K+WD+ K+ + PGH
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V V++ P+ +ASG DR ++ W
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 66/230 (28%), Positives = 111/230 (48%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W ++ C++ L+GHT V V+ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH + SL E+ + +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLW---DIRRKGCVFRYRGHSQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S +DD T+ LW+ K + GH VN V F P+ +AS S
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
D++I+ W+ + V+ G GPV + ++ D L SG +DS L+V+
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 275 (101.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 75/221 (33%), Positives = 109/221 (49%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + + + LL SGS D
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 425 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
T++ WD+ ++ + G V +V ++PDG + SG +D
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 241 (89.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 64/205 (31%), Positives = 106/205 (51%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
++E+ H V+SL L ++ L TG D +S + +L + ++ N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D +IKL
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ V +RGH V + +S D + L S + D T+K+WD+ K+ + PGH
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V V++ P+ +ASG DR ++ W
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 66/230 (28%), Positives = 111/230 (48%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W ++ C++ L+GHT V V+ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH + SL E+ + +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLW---DIRRKGCVFRYRGHSQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S +DD T+ LW+ K + GH VN V F P+ +AS S
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
D++I+ W+ + V+ G GPV + ++ D L SG +DS L+V+
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 275 (101.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 75/221 (33%), Positives = 109/221 (49%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + + + LL SGS D
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 425 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
T++ WD+ ++ + G V +V ++PDG + SG +D
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 241 (89.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 64/205 (31%), Positives = 106/205 (51%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
++E+ H V+SL L ++ L TG D +S + +L + ++ N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D +IKL
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ V +RGH V + +S D + L S + D T+K+WD+ K+ + PGH
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V V++ P+ +ASG DR ++ W
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 66/230 (28%), Positives = 111/230 (48%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W ++ C++ L+GHT V V+ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH + SL E+ + +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLW---DIRRKGCVFRYRGHSQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S +DD T+ LW+ K + GH VN V F P+ +AS S
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
D++I+ W+ + V+ G GPV + ++ D L SG +DS L+V+
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 275 (101.9 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 75/221 (33%), Positives = 109/221 (49%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + + + LL SGS D
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 425 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
T++ WD+ ++ + G V +V ++PDG + SG +D
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 271 (100.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 241 (89.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 64/205 (31%), Positives = 106/205 (51%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
++E+ H V+SL L ++ L TG D +S + +L + ++ N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D +IKL
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ V +RGH V + +S D + L S + D T+K+WD+ K+ + PGH
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V V++ P+ +ASG DR ++ W
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 219 (82.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 66/230 (28%), Positives = 111/230 (48%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W ++ C++ L+GHT V V+ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH + SL E+ + +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLW---DIRRKGCVFRYRGHSQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S +DD T+ LW+ K + GH VN V F P+ +AS S
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
D++I+ W+ + V+ G GPV + ++ D L SG +DS L+V+
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVY 257
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 269 (99.8 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 96/376 (25%), Positives = 165/376 (43%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 66 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 125
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 126 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 182
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 183 HP---RAPV--LLAGTADGNTWMWKVPTGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 236
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 237 GTIRIWDLKQGNSIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVG 296
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ +S Q
Sbjct: 297 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYD--LSTQTLRHQ 354
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
HQ + + + V + S D ++LW+ TG+ + +RGH + + S D+ L
Sbjct: 355 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASL 414
Query: 417 LLSGSKDSTLKVWDIR 432
+++ S D KV+ ++
Sbjct: 415 VVTTSGDHKAKVFCVQ 430
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 55/209 (26%), Positives = 90/209 (43%)
Query: 239 HTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL- 295
H+ +V CV + + TG +D VW + G+L+ E GH V S + L
Sbjct: 90 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 149
Query: 296 RTGAFDHTGK--QYSSPEEM---KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
TG K Q + EE+ + LE + + AP L++G+ D ++W+
Sbjct: 150 ATGDMSGLLKVWQVDTKEEVWSFEAGDLE-WMEWHPRAPV-LLAGTADGNTWMWKVPTG- 206
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG---HVGPVYQ 407
KT G PDG+ D +I++W+ G + V +G H GP+
Sbjct: 207 DCKT-FQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQGPLTC 265
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
++ + D L+L+GS D K+ T K+
Sbjct: 266 VATNQDGSLILTGSVDCQAKLVSATTGKV 294
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 272 (100.8 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 76/249 (30%), Positives = 120/249 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V S+A P + +GS D T+++WDL + TGH + V +A S
Sbjct: 204 ISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSP 263
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + + P ++ V+ S+D AR
Sbjct: 264 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYDLDLHPT-IDV----LVTCSRDATAR 317
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+WD+ + V LSGHT V VK V+ GS D TI++W+ GK L H
Sbjct: 318 VWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHK 377
Query: 282 HWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGS 336
V +L L +Y +G+ D+ KQ+ P+ L +N I N+ LVSG+
Sbjct: 378 KSVRALVLHPRQYTFASGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGA 436
Query: 337 DDFTMFLWE 345
D+ T+ +W+
Sbjct: 437 DNGTIHMWD 445
Score = 235 (87.8 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 78/299 (26%), Positives = 136/299 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 204 ISGHLGWVRSIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAV 258
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 259 SNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARV 318
Query: 307 YSSPEEMKKAALERYN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ + L + K + P+ + GS D T+ LW+ K T +T H+
Sbjct: 319 WDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRAT-LTNHK 377
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSG 420
+ V + P AS S D +IK W G F+ GH + ++ ++D +L+SG
Sbjct: 378 KSVRALVLHPRQYTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLAVNSDG-VLVSG 435
Query: 421 SKDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ + T+ +WD RT Q++ + PG D +F+ + ++ + D+ +K++
Sbjct: 436 ADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVFDQSESRLITAEADKTIKVY 494
Score = 182 (69.1 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 81/327 (24%), Positives = 137/327 (41%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV IA + V+GS ++ WD +GK + L+GH + G++ V
Sbjct: 205 SGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVA---VSN 260
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
+P S +D + WD+ K + GH AV + V+ T S+D T +V
Sbjct: 261 RSPY--LFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARV 318
Query: 266 WETTQGKLIRELKGHGHWVNSLAL-STEYALRT-GAFDHTGKQYSSPEEMKKAALERYNK 323
W+ + L GH + V ++ S E + T G+ D T + + +A L + K
Sbjct: 319 WDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKK 378
Query: 324 IKGNAPERLVSGSDDFTMFLWEPAVSKQPK-------TRMTGHQQLVNHVYFSPDGQWVA 376
+ LV +T P KQ K ++GH ++N + + DG V+
Sbjct: 379 ----SVRALVLHPRQYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVS 434
Query: 377 SASFDKSIKLWNGTTG-KF----VAVFRGHVGP---VYQISWSADSRLLLSGSKDSTLKV 428
A + +I +W+ TG F AV G + ++ + L++ D T+KV
Sbjct: 435 GAD-NGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVFDQSESRLITAEADKTIKV 493
Query: 429 WDIRTQKLKQDLPGHADEVFAVDWSPD 455
+ K+D +E V+W P+
Sbjct: 494 Y-------KEDDTA-TEESHPVNWKPE 512
Score = 175 (66.7 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 55/210 (26%), Positives = 91/210 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI-AWSADGKH 164
GH AV + P L + S D T R+WD+ T+ + +GH N V + SA+ +
Sbjct: 290 GHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQV 349
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
+ GS ++ WD GK L+ HKK + + P F S S D + +
Sbjct: 350 VTVGSHDTTIRLWDLVAGKTRAT-LTNHKKSVRALVLHPRQYT-----FASGSPD-NIKQ 402
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
W + LSGH + + DGV+ +G+ + TI +W+ G + + H V
Sbjct: 403 WKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQRI--HAA-V 459
Query: 285 NSLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + + FD + + + E K
Sbjct: 460 QPGSLDSESGIFSCVFDQSESRLITAEADK 489
Score = 163 (62.4 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 56/202 (27%), Positives = 88/202 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V VA S L S D V+ WDL + GH + V +
Sbjct: 245 SLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTI 304
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K + + LSGH + + + +A + S D
Sbjct: 305 DVLVTCSRDATARVWDIRT-KANVHTLSGHTNTVATVKCQ----SAEPQVVTVGSHDTTI 359
Query: 223 RIWDVSLRKCVICLSGHTLAVTC-VKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K L+ H +V V +GS D IK W+ G I+ L GH
Sbjct: 360 RLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPD-NIKQWKFPDGNFIQNLSGHN 418
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+LA++++ L +GA + T
Sbjct: 419 AIINTLAVNSDGVLVSGADNGT 440
Score = 163 (62.4 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 55/207 (26%), Positives = 90/207 (43%)
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKG--- 326
KL R + GH WV S+A+ TG+ D T K + K +L + + ++G
Sbjct: 199 KLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAV 258
Query: 327 -NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
N L S +D + W+ +K + GH V + P + + S D + +
Sbjct: 259 SNRSPYLFSCGEDKQVKCWDLEYNKVIR-HYHGHLSAVYDLDLHPTIDVLVTCSRDATAR 317
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISW-SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
+W+ T V GH V + SA+ +++ GS D+T+++WD+ K + L H
Sbjct: 318 VWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHK 377
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V A+ P ASG D + K W
Sbjct: 378 KSVRALVLHPRQYTFASGSPDNI-KQW 403
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 252 (93.8 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 75/271 (27%), Positives = 125/271 (46%)
Query: 214 VSASKDGDARIWDV---SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
V+ D ++WD+ + K L GH L V V DG I + S D T+ +W+
Sbjct: 56 VTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDAR 115
Query: 270 QGKLIRELKGHGH---WVNSLALSTEYALRTGAFDHTGKQYS----SPEEMKKAALERYN 322
G + L G W + +Y + +G D YS E+ A +Y
Sbjct: 116 SGDK-KHLLSFGPVDLWTVQFSPCNKYVI-SGLNDGKISMYSVETGKAEQTLDAQNGKYT 173
Query: 323 KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+P+ + SG+ D + +++ A K +T + GH V + FSP+ Q + +AS
Sbjct: 174 LSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQT-LEGHAMPVRSLCFSPNSQLLLTASD 232
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
D +KL++ T V GH V +++S D + S S D+++K+WD +K
Sbjct: 233 DGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTF 292
Query: 441 PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H D+V+ V +SP +KVAS +D+ L ++
Sbjct: 293 AEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 245 (91.3 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 64/227 (28%), Positives = 113/227 (49%)
Query: 254 IYTGSQDCTIKVWETTQG---KLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS 309
+ TG D +KVW+ + KL +LKGH V S+A+S++ + + + D T + +
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 310 PEEMKKAAL-----ERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
KK L + + + ++SG +D + ++ K +T + +
Sbjct: 115 RSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTL 174
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+ +SPDG+++AS + D I +++ GK V GH PV + +S +S+LLL+ S D
Sbjct: 175 SIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDG 234
Query: 425 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+K++D+ + L GHA V V +S DG+ AS D +K+W
Sbjct: 235 HMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIW 281
Score = 197 (74.4 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 61/248 (24%), Positives = 121/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH V+SVA S DG+ +AS S D+T+ LWD + + + + +S K
Sbjct: 81 LKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNK 140
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+++SG G++ + +TGK + + K+ I++ P + S + DG
Sbjct: 141 YVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSP-----DGKYIASGAIDGIIT 195
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
I+DV+ K V L GH + V + + + ++ T S D +K+++ T ++ L GH
Sbjct: 196 IFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHAS 255
Query: 283 WVNSLALSTEYA-LRTGAFDHTGKQYSSPE-EMKKAALERYNKIKG--NAP--ERLVSGS 336
WV +A S + + + D++ K + + E + E +++ G +P +++ S S
Sbjct: 256 WVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASAS 315
Query: 337 DDFTMFLW 344
+D ++ ++
Sbjct: 316 EDKSLNIY 323
Score = 195 (73.7 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 79/281 (28%), Positives = 120/281 (42%)
Query: 123 LASGSGDTTVRLWDL---NTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP 179
L +G D V++WDL NT K GH V+ +A S+DG+ + S S + WD
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 180 QTGKPSGNPLSGHKKWITGISWEPVHL----NAPCRRFV-SASKDGDARIWDVSLRKCVI 234
+ SG KK + +S+ PV L +PC ++V S DG ++ V K
Sbjct: 115 R---------SGDKKHL--LSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQ 163
Query: 235 CLSGHTLAVTC-VKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-T 291
L T + + DG I +G+ D I +++ GK+++ L+GH V SL S
Sbjct: 164 TLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPN 223
Query: 292 EYALRTGAFDHTGKQYSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWEP 346
L T + D K Y L + + S S D ++ +W+
Sbjct: 224 SQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDT 283
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ K T H V V +SP VASAS DKS+ ++
Sbjct: 284 SERKCLHT-FAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 170 (64.9 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 38/123 (30%), Positives = 63/123 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH V S+ FSP+ + L + S D ++L+D+ + +GH +WVLC+A+S DG
Sbjct: 207 TLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDG 266
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
KH S S ++ WD K + + H + G+ + P + + SAS+D
Sbjct: 267 KHFASSSSDNSVKIWDTSERKCL-HTFAEHTDQVWGVRYSPGN-----DKVASASEDKSL 320
Query: 223 RIW 225
I+
Sbjct: 321 NIY 323
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 274 (101.5 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 74/221 (33%), Positives = 109/221 (49%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + + + LL SGS D
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 425 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
T++ WD+ ++ + G V ++ ++PDG + SG +D
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD 252
Score = 272 (100.8 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 76/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E I N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 241 (89.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 64/205 (31%), Positives = 106/205 (51%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
++E+ H V+SL L ++ L TG D +S + +L + ++ N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D +IKL
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ V +RGH V + +S D + L S + D T+K+WD+ K+ + PGH
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V V++ P+ +ASG DR ++ W
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 220 (82.5 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 67/230 (29%), Positives = 111/230 (48%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W ++ C++ L+GHT V V+ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH + SL E+ + +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLW---DIRRKGCVFRYRGHSQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S +DD T+ LW+ K + GH VN V F P+ +AS S
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
D++I+ W+ + V+ G GPV I ++ D L SG +DS L+V+
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDS-LRVY 257
Score = 218 (81.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 53/168 (31%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V + + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 270 (100.1 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 82/288 (28%), Positives = 137/288 (47%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK IT + P N C++ +AS D +W + GH VT +++
Sbjct: 16 GHKAAITSADFSP---N--CKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 251 DG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS 308
G ++ + S+D T+++W + E K H V S+ S + L T + D + K +S
Sbjct: 71 QGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWS 130
Query: 309 SPEEMKKAALERYN---KIKGNAPE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV 363
+ +L R+ + +P+ RL VS S+D T+ +W+ SKQ +
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TTSKQCVNNFSDSVGFA 189
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
N V FSP+G +ASA D ++++W+ + + ++ H V +S+ L++ S D
Sbjct: 190 NFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSD 249
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+ D+ +L L GH VF V +S DGE SGG D + +W
Sbjct: 250 GTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 246 (91.7 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 62/203 (30%), Positives = 100/203 (49%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ L + S D ++++W + Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + + + P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TSKQCVNNFSDSVGFANFVDFSP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
RIWD+ + + + H+ V C+ + G + T S D T+K+ + +G+LI L+G
Sbjct: 209 AVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQG 268
Query: 280 HGHWVNSLALSTEYALRT-GAFD 301
H V +++ S + L T G D
Sbjct: 269 HTGPVFTVSFSKDGELFTSGGAD 291
Score = 239 (89.2 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 77/293 (26%), Positives = 133/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S FSP+ +Q+A+ S DT + LW L ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 166 VSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W + GK S H + + + +A + V+AS+D ++
Sbjct: 76 ASASRDKTVRLWVLDRKGKSS--EFKAHTAPVRSVDF-----SADGQFLVTASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGN-APERLVS 334
N + S + + DH + + M + L+ Y N + + + LV+
Sbjct: 189 ANFVDFSPNGTCIASAGSDHAVRIWDI--RMNRL-LQHYQVHSCGVNCLSFHPSGNSLVT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS DG+ S D + +W
Sbjct: 246 ASSDGTVKILDLVEGRLIYT-LQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 210 (79.0 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 61/217 (28%), Positives = 101/217 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++P R + GH + V S+ FSP G LAS S D TVRLW L+ + + H
Sbjct: 44 LWSLKPHARAYRYV-GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHT 102
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + +SADG+ LV+ S+ ++ W + + L H W+ + P
Sbjct: 103 APVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYS-LYRHTHWVRCAKFSP-----DG 156
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VS S+D +IWD + ++CV S V + +G I + D +++W+
Sbjct: 157 RLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIR 216
Query: 270 QGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
+L++ + H VN L+ +L T + D T K
Sbjct: 217 MNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVK 253
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 268 (99.4 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 96/376 (25%), Positives = 166/376 (44%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 67 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 126
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W +T + + +G +W+ W
Sbjct: 127 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVETKEEVWSFEAGDLEWM---EW 183
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 184 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 237
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 238 GTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVG 297
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ +S Q
Sbjct: 298 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYD--LSTQTLRHQ 355
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
HQ + + + V + S D ++LW+ TG+ + +RGH + + S D+ L
Sbjct: 356 CQHQSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTGRLLTDYRGHTAEILDFALSKDASL 415
Query: 417 LLSGSKDSTLKVWDIR 432
+++ S D KV+ ++
Sbjct: 416 VVTTSGDHKAKVFCVQ 431
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 55/209 (26%), Positives = 91/209 (43%)
Query: 239 HTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL- 295
H+ +V CV + + TG +D VW + G+L+ E GH V S + L
Sbjct: 91 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 150
Query: 296 RTGAFDHTGK--QYSSPEEM---KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
TG K Q + EE+ + LE + + AP L++G+ D ++W+ +
Sbjct: 151 ATGDMSGLLKVWQVETKEEVWSFEAGDLE-WMEWHPRAPV-LLAGTADGNTWMWK-VPNG 207
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG---HVGPVYQ 407
KT G PDG+ D +I++W+ G + V +G H GP+
Sbjct: 208 DCKT-FQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPLTC 266
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
++ + D L+L+GS D K+ T K+
Sbjct: 267 VATNQDGSLILTGSVDCQAKLVSATTGKV 295
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 272 (100.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 87/306 (28%), Positives = 143/306 (46%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE------RY--NKIKGNAPER 331
VN + EY L +G+ D T + + + + +E RY + + G +P
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLSPPP 248
Query: 332 LVSG---------SDDFTMFLWEPAVSKQPK-TRMTGHQQLVNHVYFSPDGQWVASASFD 381
V G S + L+ + P R T H +L V F+PDG + S D
Sbjct: 249 KVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQD 308
Query: 382 KSIKLW 387
S++++
Sbjct: 309 -SLRVY 313
Score = 256 (95.2 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 70/209 (33%), Positives = 100/209 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + + + LL SGS D
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 425 TLKVWDIRTQKLKQDLPGHADEV-FAVDW 452
T++ WD+ ++ + G V +A W
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPVRYAGSW 240
Score = 241 (89.9 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 64/205 (31%), Positives = 106/205 (51%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGN 327
++E+ H V+SL L ++ L TG D +S + +L + ++ N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D +IKL
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ V +RGH V + +S D + L S + D T+K+WD+ K+ + PGH
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V V++ P+ +ASG DR ++ W
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 43/136 (31%), Positives = 64/136 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSG 238
R WD+ + V C+ G
Sbjct: 214 RFWDLEKFQVVSCIEG 229
Score = 146 (56.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 51/181 (28%), Positives = 81/181 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWDPQT--------GKPSGNPLSGHKKWITGISWEPVHLNAPCR 211
+ L SGS ++ WD + G+P P+ W+ G+S P +
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG--PVRYAGSWVVGLSPPPKVVGCRYG 256
Query: 212 RFVSASKDGDARIWD--VSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--W 266
VS S ++ + + + H+ V + DG +Y+G QD +++V W
Sbjct: 257 AGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQD-SLRVYGW 315
Query: 267 E 267
E
Sbjct: 316 E 316
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 251 (93.4 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 80/269 (29%), Positives = 131/269 (48%)
Query: 49 EEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQ----AVFRIRPVNRCSA-- 102
++K P Y+ L+ G ++ VS E +I+ + V+++ P + S
Sbjct: 3 QQKAPQVTYLEVGSLVGHNG-FVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGK 61
Query: 103 ---TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN--TQTPMFKCTGHKNWVLCIA 157
++ GH+ V V S DG+ SGS D T+RLWD+ T +FK GH V+ +A
Sbjct: 62 AHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFK--GHTQDVMSVA 119
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSG---HKKWITGISWEPVHLNAPCRRFV 214
+S+D + ++SGS+ ++ W+ G+ L G H+ W++ I + P N P V
Sbjct: 120 FSSDNRQIISGSRDATIKVWNT-LGECKFT-LEGPEAHQDWVSCIRFSP---NTPT--IV 172
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
S S D +IWD+ KC L+ HT V V DG + +G +D +WE + GK
Sbjct: 173 SGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKP 232
Query: 274 IRELKGHGHWVNSLALS-TEYALRTGAFD 301
+ +L+ + +N+LA S +Y L D
Sbjct: 233 LYKLEAR-NTINALAFSPNKYWLSAATDD 260
Score = 243 (90.6 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 51/150 (34%), Positives = 86/150 (57%)
Query: 329 PERLVSGSDDFTMFLWE--PAVSKQP-KTR--MTGHQQLVNHVYFSPDGQWVASASFDKS 383
P+ ++S S D T+ +W+ P + P K + GH V V S DGQ+ S S+D +
Sbjct: 34 PDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNT 93
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ-KLKQDLP- 441
++LW+ T G +F+GH V +++S+D+R ++SGS+D+T+KVW+ + K + P
Sbjct: 94 LRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGPE 153
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H D V + +SP+ + SG D +K+W
Sbjct: 154 AHQDWVSCIRFSPNTPTIVSGSWDNKVKIW 183
Score = 203 (76.5 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 81/287 (28%), Positives = 133/287 (46%)
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV------SLRKC 232
PQ L GH ++T I+ P + + +S+S+D +W + S K
Sbjct: 7 PQVTYLEVGSLVGHNGFVTSIAVSPENPDT----IISSSRDKTVMVWQLTPTDATSPGKA 62
Query: 233 VICLSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST 291
L GH+ V V DG +GS D T+++W+ T+G R KGH V S+A S+
Sbjct: 63 HRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSS 122
Query: 292 EYA-LRTGAFDHTGKQYSSPEEMK------KAALERYNKIK--GNAPERLVSGSDDFTMF 342
+ + +G+ D T K +++ E K +A + + I+ N P +VSGS D +
Sbjct: 123 DNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPT-IVSGSWDNKVK 181
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+W+ K T +T H VN V SPDG AS D LW ++GK +
Sbjct: 182 IWDIKSFKCNHT-LTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEAR- 239
Query: 403 GPVYQISWSADSRLLLSGSKDSTLKVWDIRT-QKLKQDLPGHADEVF 448
+ +++S + + LS + D + +WD+ T Q L + +P ++ F
Sbjct: 240 NTINALAFSPN-KYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAF 285
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 55/198 (27%), Positives = 84/198 (42%)
Query: 97 VNRCSATIAG---HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGH 149
+ C T+ G H + V + FSP+ + SGS D V++WD+ + FKC T H
Sbjct: 142 LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKS----FKCNHTLTDH 197
Query: 150 KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP--------SGNPL--SGHKKWITG- 198
+V + S DG SG K W+ +GKP + N L S +K W++
Sbjct: 198 TGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNKYWLSAA 257
Query: 199 -----ISWEPVHLNAPCRRFVSASKDG-DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG 252
I W+ + + D++ S K CLS LA W DG
Sbjct: 258 TDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPACLS---LA-----WSADG 309
Query: 253 -VIYTGSQDCTIKVWETT 269
V+Y G D I+V++++
Sbjct: 310 SVLYAGYNDGLIRVYKSS 327
>UNIPROTKB|B4P116 [details] [associations]
symbol:GE13328 "Ribosome biogenesis protein WDR12 homolog"
species:7245 "Drosophila yakuba" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM000157 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
EMBL:AY231921 RefSeq:XP_002088279.1 ProteinModelPortal:B4P116
STRING:B4P116 EnsemblMetazoa:FBtr0259846 GeneID:6527185
KEGG:dya:Dyak_GE13328 FlyBase:FBgn0068268 Uniprot:B4P116
Length = 420
Score = 174 (66.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 74/294 (25%), Positives = 133/294 (45%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ASGKWILSGCYDNTLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQG----KLIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S+ E++ A ++G++ SG + PK + GH++
Sbjct: 216 TMLKVWSA--EVEDA-------VEGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V+ V + D + + S+D ++K+W+ + + ++ S+S +RL+L+ S
Sbjct: 254 SVSAVQWM-DASTLLTGSWDHTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTAS 311
Query: 422 KDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLKLW 471
D L+++D RT + ++ GH V V WS E + SG D KLW
Sbjct: 312 ADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Score = 170 (64.9 bits), Expect = 8.9e-21, Sum P(2) = 8.9e-21
Identities = 44/145 (30%), Positives = 83/145 (57%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDHTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQISWSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADE 446
G V + GH V + WS L +SG+ D+ K+WD R+ K DL GH ++
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEK 383
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V +DWS + + + SGG D ++++
Sbjct: 384 VLDIDWS-NPKYIVSGGVDNTVRVF 407
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 61/232 (26%), Positives = 100/232 (43%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQ----------------TPM 143
C + GH V SV+ SPDG + A+GS DT +++W + TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEVEDAVEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DASTLLTGSWDHTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
D K+W+ K + +L GHG V + S + +G D+T + + S
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRVFKS 409
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 46/176 (26%), Positives = 80/176 (45%)
Query: 305 KQYSSPEEMKKAALERY--NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
K SS + + Y ++ + E+ +S D + E + +P+ + H
Sbjct: 50 KDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLL-HDDW 108
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW-SADSRL--LLS 419
V+ V S G+W+ S +D ++ LW GK + GH P+ + W S D +S
Sbjct: 109 VSAVKAS--GKWILSGCYDNTLNLWTNK-GKHILTISGHTAPIKAVDWISLDEETGRFVS 165
Query: 420 GSKDSTLKVW--DIRTQKLK--QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S+D T +W ++ + ++ GH V +V SPDG + A+G D +LK+W
Sbjct: 166 TSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVW 221
Score = 148 (57.2 bits), Expect = 8.9e-21, Sum P(2) = 8.9e-21
Identities = 66/256 (25%), Positives = 103/256 (40%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V S G+ + SG D T+ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAVKAS--GKWILSGCYDNTLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G S +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGL- 207
Query: 208 APCRRFVSASKDGDARIWDVSLRKCV----------------ICLSGHTLAVTCVKWGGD 251
RF + S D ++W + V I L GH +V+ V+W
Sbjct: 208 ----RFATGSWDTMLKVWSAEVEDAVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA 263
Query: 252 GVIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 STLLTGSWDHTLKVWD 279
Score = 127 (49.8 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERL---- 332
L+GH V+++ L TG++DHT K + E K + I + +L
Sbjct: 248 LQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLI 307
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWV-ASASFDKSIKLWNG 389
++ S D + L++P ++ R T GH V V +S +++ S ++D KLW+
Sbjct: 308 LTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDC 367
Query: 390 TTGKFVAV-FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ K GH V I WS + + ++SG D+T++V+ R
Sbjct: 368 RSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGVDNTVRVFKSR 410
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 189 (71.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 85/349 (24%), Positives = 152/349 (43%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW-SADGKHLVSGS 169
+L + P +L + + + + L+ T + G+ + VL + + D H+ +
Sbjct: 305 LLQLLLLPRTGRLITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVAT 364
Query: 170 KAGELQCWDPQTGKPSGNPLSGHKKWITGIS-WEPVHLNAPCRRFVSASK-DGDARIWDV 227
+ +L+ ++ T S L GH I I + + A C + S D V
Sbjct: 365 NSSQLKVFELSTN--SCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRV 422
Query: 228 SLRKCVICLSGHTLAV---TCVKWGGDGVIYTGSQDCTIKVW---ETT--QGKLIRELKG 279
CV +GH+ AV C + V+ +GSQDCT+KVW ETT +G ++ + +
Sbjct: 423 H---CVAQGTGHSNAVGSIACSRMKQQFVV-SGSQDCTVKVWDLPETTGAEGVMMMKARS 478
Query: 280 ----HGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPE 330
H VNS+ +S + L +G+ D T K ++ + + + ++ + +
Sbjct: 479 TERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVD 538
Query: 331 RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+++ S S D ++ +W KT GH V + F G + S+ D +KLW
Sbjct: 539 QILGSASADGSVRIWSIQDFSCLKT-FEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTI 597
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
T + V H V+ + L+++GS DST+ VW T KL++
Sbjct: 598 KTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW---TDKLRK 643
Score = 188 (71.2 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 63/210 (30%), Positives = 101/210 (48%)
Query: 279 GHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEE--------MKKAALERYNKIKGNA 328
GH + V S+A S + + +G+ D T K + PE MK + ER ++ N+
Sbjct: 430 GHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNS 489
Query: 329 ----P--ERLVSGSDDFTMFLWEPAVSKQPKTRMT-GHQQLVNHVYFSPDGQWVASASFD 381
P + L SGS D T LW A+S + GH++ V V FSP Q + SAS D
Sbjct: 490 VCVSPNDKLLASGSQDRTAKLW--ALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASAD 547
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
S+++W+ + F GH V +I + + L+S D +K+W I+T + + L
Sbjct: 548 GSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLD 607
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H D+V+A+ E + +G D + +W
Sbjct: 608 AHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 182 (69.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 73/279 (26%), Positives = 126/279 (45%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC---- 146
VF + N C + GHT+ +LS+ G A+ + D +VR+W ++ + C
Sbjct: 371 VFELS-TNSCQI-LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQG 428
Query: 147 TGHKNWVLCIAWSA-DGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPV 204
TGH N V IA S + +VSGS+ ++ WD P+T G + K T + E
Sbjct: 429 TGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMM--KARSTERAHEK- 485
Query: 205 HLNAPC-----RRFVSASKDGDARIWDVS-LRKCVICLSGHTLAVTCVKWGG-DGVIYTG 257
+N+ C + S S+D A++W +S LR +C GH V V++ D ++ +
Sbjct: 486 DVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVC-RGHRRGVWSVQFSPVDQILGSA 544
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLA-LSTEYALRTGAFDHTGKQYS-SPEEMKK 315
S D ++++W ++ +GH V + +S L + D K ++ E +
Sbjct: 545 SADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVR 604
Query: 316 AALERYNKI----KGNAPERLVSGSDDFTMFLWEPAVSK 350
+K+ G E +V+GS D T+ +W + K
Sbjct: 605 TLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRK 643
Score = 160 (61.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 49/154 (31%), Positives = 80/154 (51%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVA--SASFDKSIKLWN 388
L +G D T+ LW+ V KQ T + G +V+ V F PD + S+S D +I++W+
Sbjct: 121 LATGGCDGTIKLWD--VIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWD 178
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGH-ADE- 446
+ + V V H PV +++S D L+S +D VWD++ QK+K+ +P + A E
Sbjct: 179 LRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEG 238
Query: 447 -VF---AVDWSPDGEK-----VASGGKDRVLKLW 471
V + D+S G K + + G VL++W
Sbjct: 239 VVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVW 272
Score = 159 (61.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E LVS S + W+ + ++ H V + F +A+ D +IKLW+
Sbjct: 76 EMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDV 135
Query: 390 TTGKFVAVFRGHVGPVYQISWSAD-SRL-LLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
+G G V+ + + D SRL L S S D +++WD+R+ + L H V
Sbjct: 136 IKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPV 195
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
A+ +SPDG + S G+D++ +W
Sbjct: 196 TALAFSPDGHTLVSSGRDKICSVW 219
Score = 139 (54.0 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 41/141 (29%), Positives = 60/141 (42%)
Query: 100 CSATIAGHTEAVLSVAFSPD-GR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
C+ + G + V V F PD R QL S S D +R+WDL + + H + V +A
Sbjct: 140 CTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALA 199
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGK-----PSGNPLSGHKKWITGISWEPVHLNAPCRR 212
+S DG LVS + WD Q K P + G + + + +
Sbjct: 200 FSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALH 259
Query: 213 FVSASKDGDARIWDVSLRKCV 233
V+A G R+WD S +CV
Sbjct: 260 LVTAGSKGVLRVWDSSSSRCV 280
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/134 (32%), Positives = 60/134 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V SV FSP + L S S D +VR+W + + + GH VL I + + G L
Sbjct: 524 GHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQL 583
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR--FVSASKDGDAR 223
VS G ++ W +T + L H+ + W L+ CR V+ S D
Sbjct: 584 VSSGSDGLVKLWTIKTNE-CVRTLDAHQDKV----WA---LHGGCRDELMVTGSADSTIT 635
Query: 224 IWDVSLRKCVICLS 237
+W LRK VI S
Sbjct: 636 VWTDKLRKTVIIKS 649
Score = 132 (51.5 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 43/171 (25%), Positives = 70/171 (40%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG-HKNWVLCIAWSADGKHLVS 167
E + + A SPD L S S +R WD Q H V +++ L +
Sbjct: 64 EDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLAT 123
Query: 168 GSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
G G ++ WD + N L G + + + P + + S+S D RIWD+
Sbjct: 124 GGCDGTIKLWDVIKQYCTHN-LKGSSGVVHLVEFHP---DISRLQLFSSSSDCAIRIWDL 179
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
+CV L H VT + + DG + + +D VW+ + K+ R +
Sbjct: 180 RSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTI 230
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG-HVGPVYQISWSADSRLLL 418
Q+ + SPD + + SAS ++ W+ + +R H PV +S+ S LL
Sbjct: 63 QEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLA 122
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA--SGGKDRVLKLW 471
+G D T+K+WD+ Q +L G + V V++ PD ++ S D +++W
Sbjct: 123 TGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIW 177
Score = 104 (41.7 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 29/100 (29%), Positives = 44/100 (44%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT-----PMFKCTGHKNW 152
+RC + H V ++AFSPDG L S D +WDL Q P+++
Sbjct: 182 SRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAV---EG 238
Query: 153 VLCIAWSAD---------GKHLVSGSKAGELQCWDPQTGK 183
V+ ++ SAD HLV+ G L+ WD + +
Sbjct: 239 VVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSR 278
Score = 81 (33.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQISW-SADSRLLLSGSKDSTLKVWDIRTQKLKQD 439
+ +I L+ T F G+ V + + D + + S LKV+++ T Q
Sbjct: 323 EHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNSC-QI 381
Query: 440 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L GH D + ++D G A+ KD+ +++W
Sbjct: 382 LHGHTDTILSIDVFRKGSMFATCAKDKSVRVW 413
Score = 62 (26.9 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSG-HTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQG 271
VSAS+ R WD ++C H++ V + + + TG D TIK+W+ +
Sbjct: 79 VSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQ 138
Query: 272 KLIRELKG 279
LKG
Sbjct: 139 YCTHNLKG 146
Score = 38 (18.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 15/72 (20%), Positives = 27/72 (37%)
Query: 79 EKVLSIV-YQPQAVFRIRPVNRC--SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW 135
+K+ S+ Q Q V R PV + + + D L + +R+W
Sbjct: 213 DKICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVW 272
Query: 136 DLNTQTPMFKCT 147
D ++ +F T
Sbjct: 273 DSSSSRCVFTQT 284
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 271 (100.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 106/354 (29%), Positives = 165/354 (46%)
Query: 62 ELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGR 121
E + P+ S E + + + + Y P A R+ +N T+ H V V FS +G+
Sbjct: 271 EQIAPV-SDTEAARKTTSQSWYVTYNP-ACKRVFNINLVH-TLE-HPSVVCCVKFSNNGK 326
Query: 122 QLASGSGDTTVRLWDLNTQTPMFKCTGHKN--------WVLCIAWSADGKHLVSGSKAGE 173
LA+G ++D+ T +F T H+ +V IA+S DGK+LV+G++ +
Sbjct: 327 YLATGCNQAA-NVFDVQTGKKLF--TLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQ 383
Query: 174 LQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCV 233
++ WD T K SGH++ I + + H N R VS S D AR+WDV +C+
Sbjct: 384 IKLWDLSTQKVR-YVFSGHEQDIYSLDFS--H-NG--RFIVSGSGDRTARLWDVETGQCI 437
Query: 234 ICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
+ L VT + D I GS D I+VW + G L+ L+GH V S+A S +
Sbjct: 438 LKLEIEN-GVTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSPD 495
Query: 293 YA-LRTGAFDHTGKQYS------------SPEEMKKAALERYNKIKGN---APERL--VS 334
+ L +G+ D T K + PE + KA + + +P+ +S
Sbjct: 496 SSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLS 555
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
GS D +M W+ + T GH+ V V FSPDG+ AS S D ++W+
Sbjct: 556 GSKDRSMQFWDLQTGQSYLT-CQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
Score = 258 (95.9 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 81/305 (26%), Positives = 142/305 (46%)
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP-----SGNPLSGHKKWITGISWEP 203
H + V C+ +S +GK+L +G +D QTGK +P ++ I++ P
Sbjct: 312 HPSVVCCVKFSNNGKYLATGCNQAA-NVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
+ V+ ++D ++WD+S +K SGH + + + +G I +GS D T
Sbjct: 371 -----DGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRT 425
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERY 321
++W+ G+ I +L+ + V ++A+S + + G+ D + +S + +
Sbjct: 426 ARLWDVETGQCILKLEIE-NGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHK 484
Query: 322 NKIKGNA--PER--LVSGSDDFTMFLWEPAVSK-------QP----KTRMTGHQQLVNHV 366
+ A P+ L+SGS D T+ +WE ++ +P K TGH V V
Sbjct: 485 ESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSV 544
Query: 367 YFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTL 426
SPD +W S S D+S++ W+ TG+ +GH V + +S D R SGS D
Sbjct: 545 AVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRA 604
Query: 427 KVWDI 431
++W I
Sbjct: 605 RIWSI 609
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 77/249 (30%), Positives = 123/249 (49%)
Query: 241 LAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTG 298
L V + + DG + TG++D IK+W+ + K+ GH + SL S + +G
Sbjct: 361 LYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSG 420
Query: 299 AFDHTGKQYSSPEEMKKAALERYNKIKGNA--P-ERLVS-GSDDFTMFLWEPAVSKQPKT 354
+ D T + + LE N + A P ++ ++ GS D + +W +VS
Sbjct: 421 SGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVW--SVSGTLVE 478
Query: 355 RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN-------GTT-----GKFVAVFRGHV 402
R+ GH++ V + FSPD + S S DK+IK+W G + G A + GH
Sbjct: 479 RLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHT 538
Query: 403 GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 462
V ++ S DSR LSGSKD +++ WD++T + GH + V +V +SPDG + ASG
Sbjct: 539 DFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASG 598
Query: 463 GKDRVLKLW 471
D ++W
Sbjct: 599 SGDLRARIW 607
Score = 206 (77.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 78/263 (29%), Positives = 129/263 (49%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
V ++AFSPDG+ L +G+ D ++LWDL+TQ + +GH+ + + +S +G+ +VSGS
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA-SKDGDARIWDVSL 229
+ WD +TG+ L + +T I+ P N +F++ S D R+W VS
Sbjct: 423 DRTARLWDVETGQCILK-LE-IENGVTAIAISP---ND---QFIAVGSLDQIIRVWSVS- 473
Query: 230 RKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE--TTQGKLIRELK-------- 278
V L GH +V + + D ++ +GS D TIKVWE T+ + +K
Sbjct: 474 GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKAT 533
Query: 279 --GHGHWVNSLALSTE--YALRTGAFDH--------TGKQYSSPEEMKKAALERYNKIKG 326
GH +V S+A+S + + L +G+ D TG+ Y + + K + + G
Sbjct: 534 YTGHTDFVLSVAVSPDSRWGL-SGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG 592
Query: 327 NAPERLVSGSDDFTMFLW--EPA 347
+ SGS D +W +PA
Sbjct: 593 R---QFASGSGDLRARIWSIDPA 612
Score = 196 (74.1 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 49/144 (34%), Positives = 74/144 (51%)
Query: 41 IVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRC 100
+V +L ++E + Y+ S ++ GS L+K + V ++ + + + I+P C
Sbjct: 476 LVERLEGHKESV-YSIAFSPDSSILLSGS-LDK-TIKVWELQAT--RSVGLSAIKPEGIC 530
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
AT GHT+ VLSVA SPD R SGS D +++ WDL T C GHKN V+ + +S
Sbjct: 531 KATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSP 590
Query: 161 DGKHLVSGSKAGELQCWDPQTGKP 184
DG+ SGS + W P
Sbjct: 591 DGRQFASGSGDLRARIWSIDPASP 614
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 268 (99.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 72/252 (28%), Positives = 116/252 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+ S I+GH V +A P A+G+GD +++WDL + TGH + V +A
Sbjct: 163 KLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAV 222
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S +L S + +++CWD + K + GH + ++ P ++ ++ +
Sbjct: 223 STKHPYLFSCGEDRQVKCWDLEYNKVIRH-YHGHLSAVYSLALHPT-IDV----LATSGR 276
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV-TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ARIWD+ + V L+GHT V + V + I TGS D T+++W+ GK + L
Sbjct: 277 DSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTL 336
Query: 278 KGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI----KGNAPERLV 333
H V S+ L + A KQ+ PE + + I N+ LV
Sbjct: 337 TNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLV 396
Query: 334 SGSDDFTMFLWE 345
SG D+ TMF W+
Sbjct: 397 SGGDNGTMFFWD 408
Score = 256 (95.2 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 83/298 (27%), Positives = 140/298 (46%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + F + + D +IWD++ K + L+GH V V
Sbjct: 168 ISGHLGWVRCIAVEPGN-----EWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAV 222
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V SLAL T L T D T +
Sbjct: 223 STKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARI 282
Query: 307 YSSPEEMKKAALERY-NKIKGNAPE----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + N + + ++++GS D T+ LW+ A K T +T H++
Sbjct: 283 WDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCT-LTNHKK 341
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V + P ASAS D +IK W GKFV GH V ++ +++ +L+SG
Sbjct: 342 SVRSIVLHPSLYMFASASPD-NIKQWRCPEGKFVQNISGHTSIVNCMAANSEG-VLVSGG 399
Query: 422 KDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ T+ WD RT Q+ + + PG D +FA+ + G ++ + D+ +K++
Sbjct: 400 DNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVY 457
Score = 221 (82.9 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 61/209 (29%), Positives = 95/209 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV S+A P LA+ D+T R+WD+ T+ + TGH N V + A +
Sbjct: 254 GHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQI 313
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK S L+ HKK + I P F SAS D + + W
Sbjct: 314 ITGSHDSTVRLWDLAAGK-SVCTLTNHKKSVRSIVLHP-----SLYMFASASPD-NIKQW 366
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
K V +SGHT V C+ +GV+ +G + T+ W+ G + + V
Sbjct: 367 RCPEGKFVQNISGHTSIVNCMAANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAP---VQ 423
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
++ +E + FD +G + + E K
Sbjct: 424 PGSMDSEAGIFAMCFDQSGSRLITAEADK 452
Score = 184 (69.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 74/324 (22%), Positives = 134/324 (41%)
Query: 147 TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL 206
+GH WV CIA + +G+ ++ WD +GK + L+GH + G++ H
Sbjct: 169 SGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLS-LTGHVSTVRGVAVSTKH- 226
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKV 265
P S +D + WD+ K + GH AV + V+ T +D T ++
Sbjct: 227 --PY--LFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARI 282
Query: 266 WETTQGKLIRELKGHGHWVNSL-ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
W+ + L GH + V S+ A +T + TG+ D T + + L + K
Sbjct: 283 WDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKS 342
Query: 324 IKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
++ P S S D + W K + ++GH +VN + + +G V+
Sbjct: 343 VRSIVLHPSLYMFASASPD-NIKQWRCPEGKFVQN-ISGHTSIVNCMAANSEGVLVSGGD 400
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGP--------VYQISWSADSRLLLSGSKDSTLKVWDI 431
+ ++ W+ TG F+ V P ++ + + L++ D T+KV+
Sbjct: 401 -NGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVY-- 457
Query: 432 RTQKLKQDLPGHADEVFAVDWSPD 455
K+D ++E ++W PD
Sbjct: 458 -----KEDDEA-SEESHPINWRPD 475
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 174 (66.3 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 63/251 (25%), Positives = 107/251 (42%)
Query: 238 GHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYAL- 295
GH V V D + + +K+W + G +R + G+ + SL + +Y +
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHSEVKIWNPSTGSCLRTIDS-GYGLCSLIVPQNKYGIV 462
Query: 296 --RTGAFD--HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
++G + G + EE+K ++ V+ S D + WE V KQ
Sbjct: 463 GTKSGVLEIIDIGSA-TKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQV-KQ 520
Query: 352 PKTRMTGHQQLVN-----------HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG 400
+ T + N V SPD + +A A D ++K++ + KF G
Sbjct: 521 KSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYG 580
Query: 401 HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 460
H PV I S+D L+++GS+D LK+W + + + H D V V + + +
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLF 640
Query: 461 SGGKDRVLKLW 471
S GKDR++K W
Sbjct: 641 SIGKDRLVKYW 651
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 45/150 (30%), Positives = 73/150 (48%)
Query: 324 IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
I +A + G D ++ +W+ + H+ V + ++ G +AS S D
Sbjct: 71 IASSASSLVAVGYADGSIRIWDTEKGTC-EVNFNSHKGAVTALRYNKVGSMLASGSKDND 129
Query: 384 IKLWN--GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 441
I LW+ G +G F RGH V + + + L+S SKD L+VWD+ TQ Q +
Sbjct: 130 IILWDVVGESGLFR--LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVS 187
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH EV++VD P+ V +G D+ L+ +
Sbjct: 188 GHHSEVWSVDTDPEERYVVTGSADQELRFY 217
Score = 164 (62.8 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 62/273 (22%), Positives = 116/273 (42%)
Query: 216 ASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
++ + +IW+ S C+ + SG+ L V G++ G++ +++ + +
Sbjct: 423 STSHSEVKIWNPSTGSCLRTIDSGYGLCSLIVPQNKYGIV--GTKSGVLEIIDIGSATKV 480
Query: 275 RELKGHGHWVNSLA-LSTEYALRTGAFDHTGK--QYS----SPEEMKKAALERYNKIKGN 327
E+K HG + S+ + + T + DH K +Y S + KK + +K N
Sbjct: 481 EEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMN 540
Query: 328 APERLVSGSDD---FTMFLWEPAV------SKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
V+ S D + L + V S + + GH+ V + S DG+ + +
Sbjct: 541 DDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTG 600
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
S DK++K+W G H V + + ++ L S KD +K WD +
Sbjct: 601 SQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLL 660
Query: 439 DLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L GH E++ + S G+ + +G DR ++ W
Sbjct: 661 TLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRW 693
Score = 162 (62.1 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 54/203 (26%), Positives = 90/203 (44%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
VL+VA SPD + +A D+TV+++ +++ GHK V+CI S+DG+ +V+GS+
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
L+ W G + H + G+ + V N S KD + WD
Sbjct: 603 DKNLKIWGLDFGD-CHKSIFAHGDSVMGVKF--VR-NT--HYLFSIGKDRLVKYWDADKF 656
Query: 231 KCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+ ++ L GH + C+ G + TGS D +++ W+ ++ E + L
Sbjct: 657 EHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEEPFFLEEEKE----KRLEE 712
Query: 290 STEYALRTGAFDHTGKQYSSPEE 312
E + A D G PEE
Sbjct: 713 LFESEIDNAADDRHGPMEEIPEE 735
Score = 153 (58.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
S ++++ Y ++ RI + C H AV ++ ++ G LASGS D + L
Sbjct: 74 SASSLVAVGYADGSI-RIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIIL 132
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKK 194
WD+ ++ +F+ GH++ V + + GK LVS SK L+ WD +T + +SGH
Sbjct: 133 WDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLET-QHCMQIVSGHHS 191
Query: 195 WITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
+ + +P R V+ S D + R + V
Sbjct: 192 EVWSVDTDPEE-----RYVVTGSADQELRFYAV 219
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 42/154 (27%), Positives = 77/154 (50%)
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
RYNK+ G+ L SGS D + LW+ V + R+ GH+ V + F G+ + S+S
Sbjct: 113 RYNKV-GSM---LASGSKDNDIILWD-VVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSS 167
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 439
DK +++W+ T + + GH V+ + + R +++GS D L+ + ++
Sbjct: 168 KDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSSNGS 227
Query: 440 L--PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L +A+E+ A E+ ++ K +LKL+
Sbjct: 228 LVSDSNANEIKA------SEEHSTENKWEILKLF 255
Score = 135 (52.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 62/267 (23%), Positives = 107/267 (40%)
Query: 100 CSATI-AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
C TI +G+ L V P + G+ + + D+ + T + + H + I
Sbjct: 439 CLRTIDSGYGLCSLIV---PQNKYGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITP 495
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNP-----LSGHKKWITGISWEPVHLNAPCRRF 213
+ V+ S E++ W+ Q + SG +S K V ++ +
Sbjct: 496 IPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHI 555
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
A D +++ + K + L GH L V C+ DG +I TGSQD +K+W G
Sbjct: 556 AVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGD 615
Query: 273 LIRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYNK-----IK 325
+ + HG V + +T Y G D K + + + LE ++
Sbjct: 616 CHKSIFAHGDSVMGVKFVRNTHYLFSIGK-DRLVKYWDADKFEHLLTLEGHHAEIWCLAI 674
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQP 352
N + LV+GS D +M W+ S++P
Sbjct: 675 SNRGDFLVTGSHDRSMRRWDR--SEEP 699
Score = 131 (51.2 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 75/301 (24%), Positives = 125/301 (41%)
Query: 101 SATIAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLN------TQTPMFKCTGHKNWV 153
+AT G +V S +A+ G+ + + + + V +W + T TP G V
Sbjct: 10 AATSFGVISSVDSNIAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAV 68
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
IA SA V G G ++ WD + G N + HK +T + + V
Sbjct: 69 TSIASSASSLVAV-GYADGSIRIWDTEKGTCEVN-FNSHKGAVTALRYNKVG-----SML 121
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCTIKVWETTQG 271
S SKD D +WDV + L GH VT + + GG ++ + S+D ++VW+
Sbjct: 122 ASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV-SSSKDKFLRVWDLETQ 180
Query: 272 KLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSPEEMKKAAL---ERYNKIKG 326
++ + GH V S+ E Y + TG+ D + Y+ E +L N+IK
Sbjct: 181 HCMQIVSGHHSEVWSVDTDPEERYVV-TGSADQELRFYAVKEYSSNGSLVSDSNANEIKA 239
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ E + E + +Q K R V V F+ G+ +A K+I++
Sbjct: 240 SE-EHSTENKWEILKLFGE--IQRQTKDR-------VARVRFNVSGKLLACQMAGKTIEI 289
Query: 387 W 387
+
Sbjct: 290 F 290
Score = 56 (24.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 386 LWNGTTGKFVAV-FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT 433
L + K V + +GH V ++ S D+ LL+S S S +K+W+ T
Sbjct: 389 LKSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMSTSH-SEVKIWNPST 436
Score = 39 (18.8 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 311 EEMKKAALERYNKIKGNAPERL 332
+E K+ A K KG PE L
Sbjct: 764 DETKRHAAYEEEKTKGKVPEYL 785
Score = 37 (18.1 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 422 KDSTLKVWDIRTQKLKQ 438
KD+ K+ +IR+Q+ K+
Sbjct: 909 KDAKAKLLEIRSQQAKR 925
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 267 (99.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 82/288 (28%), Positives = 138/288 (47%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK IT + P N C++ +AS D +W + GH VT +++
Sbjct: 16 GHKAAITSADFSP---N--CKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 251 DG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS 308
G ++ + S+D T+++W + E K H V S+ S + L T + D + K +S
Sbjct: 71 QGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWS 130
Query: 309 SPEEMKKAALERYN---KIKGNAPE-RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV 363
+ +L R+ + +P+ RL VS S+D T+ +W+ +KQ +
Sbjct: 131 MFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TTNKQCVNNFSDSVGFA 189
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
N V F+P+G +ASA D ++K+W+ K + ++ H V +S+ L++ S D
Sbjct: 190 NFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSD 249
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
T+K+ D+ +L L GH VF V +S DGE + SGG D + +W
Sbjct: 250 GTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 244 (91.0 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 79/293 (26%), Positives = 133/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S FSP+ +Q+A+ S DT + LW L ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 166 VSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W + GK S H + + + +A + V+AS+D ++
Sbjct: 76 ASASRDRTVRLWVLDRKGKSS--EFKAHTAPVRSVDF-----SADGQLLVTASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY--NKIKGNA----P--ERLVS 334
N + + + + DH K + M K L+ Y + N P LV+
Sbjct: 189 ANFVDFNPNGTCIASAGSDHAVKIWDI--RMNKL-LQHYQVHSCGVNCLSFHPLGNSLVT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS DG+ + S D + +W
Sbjct: 246 ASSDGTVKMLDLIEGRLIYT-LQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 241 (89.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 62/204 (30%), Positives = 102/204 (50%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ L + S D ++++W + Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + + + P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+IWD+ + K + H+ V C+ + G+ ++ T S D T+K+ + +G+LI L+
Sbjct: 209 AVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLV-TASSDGTVKMLDLIEGRLIYTLQ 267
Query: 279 GHGHWVNSLALSTEYALRT-GAFD 301
GH V +++ S + L T G D
Sbjct: 268 GHTGPVFTVSFSKDGELLTSGGAD 291
Score = 117 (46.2 bits), Expect = 0.00088, P = 0.00088
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH + +S + + + + S D+ L +W ++ GH D V ++ +SP G
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 458 KVASGGKDRVLKLWM 472
+AS +DR ++LW+
Sbjct: 74 LLASASRDRTVRLWV 88
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 244 (91.0 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 49/139 (35%), Positives = 76/139 (54%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
VSG D LW QP GH V F P+ +VA+ S D++++LW+ G
Sbjct: 557 VSGGHDRVARLWATD-HYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNG 615
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
V +F GH GP++ +++S + + L SGS D + +WDI + +L GH ++A+ +
Sbjct: 616 NCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKF 675
Query: 453 SPDGEKVASGGKDRVLKLW 471
S DGE +ASG D ++LW
Sbjct: 676 SRDGEIIASGSIDNTVRLW 694
Score = 218 (81.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 62/205 (30%), Positives = 95/205 (46%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S + GH+ V V+FSPD L S S D T+RLW L T T + GH V +S
Sbjct: 492 SKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSP 551
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G + VSG + W +P +GH +T + P N+ + S D
Sbjct: 552 FGYYFVSGGHDRVARLWATDHYQPL-RIFAGHLADVTCTRFHP---NS--NYVATGSSDR 605
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
R+WDV CV +GH + + + +G + +GS D + +W+ G +I ELKG
Sbjct: 606 TVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKG 665
Query: 280 HGHWVNSLALSTE-YALRTGAFDHT 303
H + +L S + + +G+ D+T
Sbjct: 666 HTGTIYALKFSRDGEIIASGSIDNT 690
Score = 213 (80.0 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 61/222 (27%), Positives = 105/222 (47%)
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIR 275
S D RI D L GH+ V V + D + + S+D TI++W +
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 276 ELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPE 330
KGH + V S Y +G D + +++ P + L + +
Sbjct: 536 GYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNS 595
Query: 331 RLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
V+ GS D T+ LW+ ++ TGH+ ++ + FSP+G+++AS S D + LW+
Sbjct: 596 NYVATGSSDRTVRLWD-VLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
G +A +GH G +Y + +S D ++ SGS D+T+++WD+
Sbjct: 655 GHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 192 (72.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 49/169 (28%), Positives = 75/169 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH V FSP G SG D RLW + P+ GH V C +
Sbjct: 533 CLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFH 592
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ ++ +GS ++ WD G +GHK I +++ P N + S S D
Sbjct: 593 PNSNYVATGSSDRTVRLWDVLNGN-CVRIFTGHKGPIHSLAFSP---NG--KFLASGSTD 646
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
G +WD+ + L GHT + +K+ DG +I +GS D T+++W+
Sbjct: 647 GRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 191 (72.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 67/236 (28%), Positives = 110/236 (46%)
Query: 243 VTCVKWGGDGVIYTGS-QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD 301
+T V + D + G D T++VW T KL R++K +N + ++ L D
Sbjct: 429 LTAVDFTDDSSLIAGGFADSTVRVWSVTPKKL-RKVKSAAD-LNLIDKESDDVLER-IMD 485
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTG- 358
K S + + + Y +P+R L+S S+D T+ LW S Q T + G
Sbjct: 486 E--KTSSESKILHGHSGPVYGV--SFSPDRNYLLSSSEDGTIRLW----SLQTFTCLVGY 537
Query: 359 --HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
H V FSP G + S D+ +LW + + +F GH+ V + +S
Sbjct: 538 KGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 597
Query: 417 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD-RVLKLW 471
+ +GS D T+++WD+ + GH + ++ +SP+G+ +ASG D RVL LW
Sbjct: 598 VATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVL-LW 652
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 66/248 (26%), Positives = 103/248 (41%)
Query: 127 SGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSG 186
S D R+ D T + GH V +++S D +L+S S+ G ++ W QT
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 187 NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
GH + + P FVS D AR+W + + +GH VTC
Sbjct: 536 G-YKGHNYPVWDTQFSPFGYY-----FVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT 589
Query: 247 KWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTG 304
++ + TGS D T+++W+ G +R GH ++SLA S L +G+ D
Sbjct: 590 RFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRV 649
Query: 305 KQYSSPEEMKKAALERYN----KIKGNAP-ERLVSGSDDFTMFLWEPA-----VSKQPKT 354
+ + A L+ + +K + E + SGS D T+ LW+ V T
Sbjct: 650 LLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAIDDVETDDFT 709
Query: 355 RMTGHQQL 362
TGH L
Sbjct: 710 AATGHIHL 717
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 44/123 (35%), Positives = 58/123 (47%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AGH V F P+ +A+GS D TVRLWD+ + TGHK + +A+S +GK
Sbjct: 580 AGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKF 639
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SGS G + WD G L GH TG + + + S S D R+
Sbjct: 640 LASGSTDGRVLLWDIGHGLMIAE-LKGH----TGTIYA-LKFSRDGEIIASGSIDNTVRL 693
Query: 225 WDV 227
WDV
Sbjct: 694 WDV 696
Score = 74 (31.1 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 36/131 (27%), Positives = 58/131 (44%)
Query: 79 EKVLSIVYQPQAVFRIR--PVNR---CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVR 133
+K+ I+Y ++ RIR P C T + + +V F+ D +A G D+TVR
Sbjct: 392 DKLDKIMYMKESTKRIRLGPETLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVR 451
Query: 134 LWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQ-CWDPQTGKPSGNPLSGH 192
+W + TP K K+ +AD +L+ L+ D +T S L GH
Sbjct: 452 VWSV---TPK-KLRKVKS-------AAD-LNLIDKESDDVLERIMDEKTSSES-KILHGH 498
Query: 193 KKWITGISWEP 203
+ G+S+ P
Sbjct: 499 SGPVYGVSFSP 509
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 265 (98.3 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 77/242 (31%), Positives = 122/242 (50%)
Query: 238 GHTLAVTCVKWGGDG-VIYTGSQDCTIKVW-ETTQGKLIRELKGHGHWVNSLALSTE-YA 294
GH VT V++ G ++ + S+D T+++W +GK E K H V S+ S +
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQF 74
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYN---KIKGNAPE-RL-VSGSDDFTMFLWEPAVS 349
L T + D + K +S + +L R+ + +P+ RL VS S+D T+ +W+ +
Sbjct: 75 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-TTN 133
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
KQ + N V F+P G +ASA D+++K+W+ K + ++ H G V IS
Sbjct: 134 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 193
Query: 410 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 469
+ L++ S D TLK+ D+ +L L GH VF V +S GE ASGG D +
Sbjct: 194 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 253
Query: 470 LW 471
LW
Sbjct: 254 LW 255
Score = 236 (88.1 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 55/175 (31%), Positives = 89/175 (50%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
HT V SV FS DG+ LA+ S D ++++W + Q ++ H +WV C +S DG+ +V
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
S S+ ++ WD T K N S + + + P + C SA D ++WD
Sbjct: 119 SCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNP---SGTC--IASAGSDQTVKVWD 172
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
V + K + H+ V C+ + G + T S D T+K+ + +G+LI L+GH
Sbjct: 173 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGH 227
Score = 224 (83.9 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 44/118 (37%), Positives = 68/118 (57%)
Query: 355 RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQISWSAD 413
R GH+ +V V FSP G +ASAS D++++LW GKF + F+ H PV + +SAD
Sbjct: 13 RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSAD 71
Query: 414 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ L + S+D ++KVW + Q+ L H V +SPDG + S +D+ +K+W
Sbjct: 72 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 129
Score = 209 (78.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 62/203 (30%), Positives = 93/203 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + V SV FSP G LAS S D TVRLW + + + H V + +SADG+ L
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+ S+ ++ W + + L H W+ + P R VS S+D +IW
Sbjct: 76 ATASEDKSIKVWSMYRQRFLYS-LYRHTHWVRCAKFSP-----DGRLIVSCSEDKTIKIW 129
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D + ++CV S V + G I + D T+KVW+ KL++ + H V
Sbjct: 130 DTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV 189
Query: 285 NSLAL--STEYALRTGAFDHTGK 305
N ++ S Y + T + D T K
Sbjct: 190 NCISFHPSGNYLI-TASSDGTLK 211
Score = 178 (67.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/265 (24%), Positives = 113/265 (42%)
Query: 134 LWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP-QTGKPSGNPLSGH 192
LW+ ++ GHK+ V + +S G L S S+ ++ W P + GK S H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS--EFKAH 59
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG 252
+ + + +A + +AS+D ++W + ++ + L HT V C K+ DG
Sbjct: 60 TAPVRSVDF-----SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG 114
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSP 310
+I + S+D TIK+W+TT + + + N + + + + D T K +
Sbjct: 115 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV- 173
Query: 311 EEMKKAALERYNKIKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ K L+ Y G P L++ S D T+ + + + T + GH
Sbjct: 174 -RVNKL-LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYT-LQGHTGP 230
Query: 363 VNHVYFSPDGQWVASASFDKSIKLW 387
V V FS G+ AS D + LW
Sbjct: 231 VFTVSFSKGGELFASGGADTQVLLW 255
Score = 116 (45.9 bits), Expect = 0.00099, P = 0.00099
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHA 444
LWN + GH V + +S LL S S+D T+++W I ++ K + H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGKFSEFKAHT 60
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V +VD+S DG+ +A+ +D+ +K+W
Sbjct: 61 APVRSVDFSADGQFLATASEDKSIKVW 87
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 261 (96.9 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 78/279 (27%), Positives = 140/279 (50%)
Query: 215 SASKDGDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG 271
SA D +W+V C L GH+ AV + + DG ++++ S D T+ VW++ G
Sbjct: 110 SAGFDRLILLWNV-YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG 168
Query: 272 KLIRELKGHGHWVNSL--ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK--- 325
+ ++ LKGH +VNS A + TG+ D T K + + KKAA++ + N +
Sbjct: 169 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW---DIRKKAAVQTFQNTYQVLA 225
Query: 326 ---GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ ++++SG D + +W+ +K T M GH V + S +G ++ S + D
Sbjct: 226 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDN 284
Query: 383 SIKLWN----GTTGKFVAVFRGHVGP----VYQISWSADSRLLLSGSKDSTLKVWDIRTQ 434
++++W+ + V +F+G+V + + SWS D + GS D + VWD ++
Sbjct: 285 TVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSR 344
Query: 435 KLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
++ LPGHA V + + P+ + S D+ +L+MG
Sbjct: 345 RILYKLPGHAGSVNELAFHPEEPIILSASSDK--RLYMG 381
Score = 251 (93.4 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 82/298 (27%), Positives = 143/298 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
++GH V F P G LAS D + LW++ + GH V+ + ++ DG
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 148
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L S S + WD +TG+ L GH ++ S P P + + S DG
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCYPAR-RGP-QLVCTGSDDGTV 203
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ +K + +T V V + D +I +G D IKVW+ Q KL ++GH
Sbjct: 204 KLWDIR-KKAAVQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGH 261
Query: 281 GHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE--MK--KAALERYNK--IKGN-A 328
V L+LS+E + L + A D+T + + +P+E +K + + + K ++ + +
Sbjct: 262 ADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 321
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++ GS D +++W+ S++ ++ GH VN + F P+ + SAS DK +
Sbjct: 322 PDGSKIAGGSADRFVYVWD-TTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
Score = 230 (86.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 74/264 (28%), Positives = 117/264 (44%)
Query: 228 SLRKCVICLSGHTLAVTCVK---WGGDGVIYTGSQDCTIKVWETTQGKL--IRELKGHGH 282
SL+ ++ LSGH V C K WG + + D I +W G LKGH
Sbjct: 81 SLQAPIMLLSGHEGEVYCCKFHPWGN--TLASAGFDRLILLWNV-YGDCDNYATLKGHSG 137
Query: 283 WVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PERLVSG 335
V L +T+ + L + + D T + S + L+ + + P+ + +G
Sbjct: 138 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 197
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
SDD T+ LW+ +T +Q L V F+ + S D IK+W+ K
Sbjct: 198 SDDGTVKLWDIRKKAAVQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDLRQNKLT 255
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPG--HADE--V 447
RGH V +S S++ LLS + D+T+++WD+R ++ + G H E +
Sbjct: 256 YTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNL 315
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
WSPDG K+A G DR + +W
Sbjct: 316 LRCSWSPDGSKIAGGSADRFVYVW 339
Score = 196 (74.1 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 71/308 (23%), Positives = 138/308 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + G L S + W+ + L GH +G
Sbjct: 83 QAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 138
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 139 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 197
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + ++ + + + V ++ + T + +G D+ K + +
Sbjct: 198 SDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 256
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 257 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLL 316
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+SPDG +A S D+ + +W+ T+ + + GH G V ++++ + ++LS S D
Sbjct: 317 RCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDK 376
Query: 425 TLKVWDIR 432
L + +I+
Sbjct: 377 RLYMGEIQ 384
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 44/168 (26%), Positives = 82/168 (48%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH+ AV+ + ++ DG L S S D TV +WD T + + GH ++V +
Sbjct: 130 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 189
Query: 162 GKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G LV +GS G ++ WD + K + + + +++ N + +S D
Sbjct: 190 GPQLVCTGSDDGTVKLWDIR--KKAAVQTFQNTYQVLAVTF-----NDTSDQIISGGIDN 242
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D ++WD+ K + GH +VT + +G + + + D T+++W+
Sbjct: 243 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWD 290
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GH---- 149
N+ + T+ GH ++V ++ S +G L S + D TVR+WD+ P +C G+
Sbjct: 252 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNF 311
Query: 150 -KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW---EPVH 205
KN + C +WS DG + GS + WD T + L GH + +++ EP+
Sbjct: 312 EKNLLRC-SWSPDGSKIAGGSADRFVYVWDT-TSRRILYKLPGHAGSVNELAFHPEEPII 369
Query: 206 LNA 208
L+A
Sbjct: 370 LSA 372
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 264 (98.0 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 90/334 (26%), Positives = 156/334 (46%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIKGAEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P +E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPVVTLSGHME 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AVSSVLWSDAEEICSASWDHTIRVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQK 435
D+ I+LW+ T G V++ H G V + WS + L+SGS D+ +K+WD R+ K
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCK 376
Query: 436 LK-QDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
DL H D+V +VDW+ G + SGG D L
Sbjct: 377 APLYDLAAHEDKVLSVDWTDTG-LLLSGGADNKL 409
Score = 233 (87.1 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 54/161 (33%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EAV SV +S D ++ S S D T+R+WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 228 (85.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 83/322 (25%), Positives = 151/322 (46%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + E++ + T P H WI+ I + ++ S D +RIW
Sbjct: 75 ISSEEVVEIEYVEKYTA-PQPEQCMFHDDWISSIKGAEEWI-------LTGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + + S D TI +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCC 185
Query: 278 KGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVS 334
+GH V+S+A+ T++ +G++D K +S+ ++ +E N P +
Sbjct: 186 RGHAGSVDSIAVDGSGTKFC--SGSWDKMLKIWSTVPTDEEDEMEEST----NRPRKKQK 239
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
+ +++ P ++GH + V+ V +S D + + SAS+D +I++W+ +G
Sbjct: 240 TE--------QLGLTRTPVVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSL 290
Query: 395 VAVFRGHVGPVYQ-ISWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAV 450
+ G+ V+ IS+S + L SGS D +++WD RT+ + L H V +V
Sbjct: 291 KSTLTGN--KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSV 348
Query: 451 DWSPDGEK-VASGGKDRVLKLW 471
WSP E+ + SG D ++KLW
Sbjct: 349 KWSPTHEQQLISGSLDNIVKLW 370
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 54/176 (30%), Positives = 86/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH V + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPVVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 136 (52.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ I Y + + +C H + + S+ + + + +GS D T R+W L ++
Sbjct: 81 VEIEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + ++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDGSGTKFCSGSWDKMLKIW 216
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 267 (99.0 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 83/306 (27%), Positives = 139/306 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH V +V FSPD +ASG D V++W +T ++ GH + I+WS DG
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGA 231
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+ SGS ++ W+ TGK P GH ++ I++ P VS S D
Sbjct: 232 TIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKG-----NMLVSGSYDEAVF 286
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+WDV + + L H+ V+ + DG + + D +++W+T+ G+ +R L +
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDN 346
Query: 283 W-VNSLALST--EYALR------TGAFDHT-G---KQYSSPEEMK---KAALERYNK-IK 325
V+S+ S +Y L +D+ G K Y K A Y + I
Sbjct: 347 PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIP 406
Query: 326 GNAPERL--VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV--YFSPDGQWVASASFD 381
G P VSGS+D + W+ V+K+ R+ H +V V + +G+++ S D
Sbjct: 407 GRTPGYAFAVSGSEDGAILCWD-VVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLD 465
Query: 382 KSIKLW 387
++++W
Sbjct: 466 GTVRVW 471
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 77/305 (25%), Positives = 137/305 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + ++ + + P S DG ++W S K + GH ++ + W
Sbjct: 172 LRGHLRGVSAVRFSP-----DASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISW 226
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
DG I +GS D TI++W GK GH ++V ++A S + L +G++D
Sbjct: 227 SPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVF 286
Query: 306 QYS--SPEEMKK--AALERYNKIKGNAPERLVSG-SDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ S MK A + + I L++ + D + +W+ + + +T +
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDN 346
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW-------SAD 413
V+ V FSP+G++V + + D ++LW+ G+ + ++GH Y +S S
Sbjct: 347 PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIP 406
Query: 414 SR-----LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEK--VASGGKDR 466
R +SGS+D + WD+ T+K+ Q + H V VD GE + S G D
Sbjct: 407 GRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDG 466
Query: 467 VLKLW 471
+++W
Sbjct: 467 TVRVW 471
Score = 239 (89.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 46/126 (36%), Positives = 72/126 (57%)
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
+V+ + K + GH + V+ V FSPD +AS D ++K+W +TGK + F GH+ +
Sbjct: 163 SVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGIS 222
Query: 407 QISWSADSRLLLSGSKDSTLKVWDIRTQKLKQD-LPGHADEVFAVDWSPDGEKVASGGKD 465
ISWS D + SGS D T+++W++ T K GH + V+A+ +SP G + SG D
Sbjct: 223 TISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYD 282
Query: 466 RVLKLW 471
+ LW
Sbjct: 283 EAVFLW 288
Score = 232 (86.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 64/195 (32%), Positives = 101/195 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT----QTPMFKCTGHKNWVLCIAW 158
T GH + ++++SPDG +ASGS D T+RLW++ T TP GH N+V IA+
Sbjct: 213 TFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFI---GHHNYVYAIAF 269
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS--WEPVHLNAPCRRFVSA 216
S G LVSGS + WD ++ + + L H ++GI W+ L A C
Sbjct: 270 SPKGNMLVSGSYDEAVFLWDVRSARVMKS-LPAHSDPVSGIDVVWDGT-LIASC------ 321
Query: 217 SKDGDARIWDVSLRKCVICLSGH-TLAVTCVKWGGDG--VIYTGSQDCTIKVWETTQGKL 273
+ DG RIWD S +C+ L V+ VK+ +G V+ DC +++W+ +G+
Sbjct: 322 ATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDC-VRLWDYVEGRC 380
Query: 274 IRELKGHGHWVNSLA 288
++ +GH + SL+
Sbjct: 381 LKTYQGHSNKKYSLS 395
Score = 148 (57.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 73/311 (23%), Positives = 118/311 (37%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S D + SG G ++ W TGK GH I+ ISW P
Sbjct: 170 FLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYT-FEGHLAGISTISWSP 228
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKC-VICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
S S D R+W+V K GH V + + G ++ +GS D
Sbjct: 229 DGAT-----IASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDE 283
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTG-AFDHTGKQY-SSPEEMKKAALE 319
+ +W+ ++++ L H V+ + + + L A D + + +S + + +
Sbjct: 284 AVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVH 343
Query: 320 RYN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FSPD 371
N K N L DD LW+ + KT GH + F
Sbjct: 344 EDNPPVSSVKFSPNGKYVLAWTLDDCVR-LWDYVEGRCLKTYQ-GHSNKKYSLSGAFGVY 401
Query: 372 GQ----------WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW--SADSRLLLS 419
GQ + S S D +I W+ T K + H G V + + + R ++S
Sbjct: 402 GQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVS 461
Query: 420 GSKDSTLKVWD 430
D T++VW+
Sbjct: 462 CGLDGTVRVWE 472
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 53/193 (27%), Positives = 88/193 (45%)
Query: 89 QAVFR--IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC 146
+AVF +R R ++ H++ V + DG +AS + D VR+WD +T +
Sbjct: 283 EAVFLWDVRSA-RVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTL 341
Query: 147 TGHKNW-VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH--KKWIT----GI 199
N V + +S +GK++++ + ++ WD G+ GH KK+ G+
Sbjct: 342 VHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCL-KTYQGHSNKKYSLSGAFGV 400
Query: 200 SWEPVHLNAPCRRF-VSASKDGDARIWDVSLRKCVICLSGH---TLAV-TCVKWGGDGVI 254
+ + P F VS S+DG WDV +K + + H L V TC G ++
Sbjct: 401 YGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMV 460
Query: 255 YTGSQDCTIKVWE 267
G D T++VWE
Sbjct: 461 SCGL-DGTVRVWE 472
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 269 (99.8 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 66/204 (32%), Positives = 103/204 (50%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W +N + TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHT 303
VN + +EY L +G+ D T
Sbjct: 189 SGPVNVVEFHPSEYLLASGSSDRT 212
Score = 239 (89.2 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 69/221 (31%), Positives = 102/221 (46%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + VW + + L GH + SL +S + L A +G E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P + SGS D + LW+ K + H Q V
Sbjct: 94 AAKI-LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR-RKGCIFKYKSHTQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+ FSPDG+W+ASA+ D ++KLW+ T GK + F GH GPV + + LL SGS D
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDR 211
Query: 425 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
T++ WD+ + + A V + ++PDG + G +D
Sbjct: 212 TIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD 252
Score = 218 (81.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 60/205 (29%), Positives = 102/205 (49%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYN----KIKGN 327
++E+ H V+SL L ST L TG D +S + +L + ++ +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
A E L V+GS ++ +W+ +K +T + GH+ + + F P G +VAS S D IKL
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRT-LLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ + ++ H V + +S D + L S + D T+K+WD+ K+ + GH+
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGP 191
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V V++ P +ASG DR ++ W
Sbjct: 192 VNVVEFHPSEYLLASGSSDRTIRFW 216
Score = 213 (80.0 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 57/202 (28%), Positives = 91/202 (45%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSG 128
+E ++S ++ L + R+ + T+ GH + S+ F P G +ASGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD GK
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+GH + + + P S S D R WD+ V C+ V C+ +
Sbjct: 185 FTGHSGPVNVVEFHPSEY-----LLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILF 239
Query: 249 GGDGV-IYTGSQDCTIKV--WE 267
DG +Y G QD +++V WE
Sbjct: 240 NPDGCCLYGGFQD-SLRVYGWE 260
Score = 196 (74.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 63/229 (27%), Positives = 105/229 (45%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W V+ CV+ L+GHT + ++ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN------ 322
K++R L GH + SL + + +G+ D K + + +K + +Y
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW---DVRRKGCIFKYKSHTQAV 150
Query: 323 KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+ +P+ L S +DD T+ LW+ K TGH VN V F P +AS S
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKV-MFEFTGHSGPVNVVEFHPSEYLLASGSS 209
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
D++I+ W+ V+ PV I ++ D L G +DS L+V+
Sbjct: 210 DRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDS-LRVY 257
Score = 165 (63.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 49/232 (21%), Positives = 102/232 (43%)
Query: 97 VNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
VN+ C ++ GHT + S+ S + +GS ++R+WDL + GHK +
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ + G + SGS +++ WD + K H + + + + P +
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLA 163
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKL 273
SA+ D ++WD++ K + +GH+ V V++ + ++ +GS D TI+ W+ + +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHV 223
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
+ ++ V + + + G F + + Y PE + + K+
Sbjct: 224 VSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 275
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 263 (97.6 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 90/334 (26%), Positives = 156/334 (46%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIKGAEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P +E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPIVTLSGHME 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AVSSVLWSDAEEICSASWDHTIRVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQK 435
D+ I+LW+ T G V++ H G V + WS + L+SGS D+ +K+WD R+ K
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCK 376
Query: 436 LK-QDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
DL H D+V +VDW+ G + SGG D L
Sbjct: 377 APLYDLAAHEDKVLSVDWTDTG-LLLSGGADNKL 409
Score = 233 (87.1 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 54/161 (33%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EAV SV +S D ++ S S D T+R+WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 227 (85.0 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 83/322 (25%), Positives = 151/322 (46%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + E++ + T P H WI+ I + ++ S D +RIW
Sbjct: 75 ISSEEVVEIEYVEKYTA-PQPEQCMFHDDWISSIKGAEEWI-------LTGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + + S D TI +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCC 185
Query: 278 KGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVS 334
+GH V+S+A+ T++ +G++D K +S+ ++ +E N P +
Sbjct: 186 RGHAGSVDSIAVDGSGTKFC--SGSWDKMLKIWSTVPTDEEDEMEEST----NRPRKKQK 239
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
+ +++ P ++GH + V+ V +S D + + SAS+D +I++W+ +G
Sbjct: 240 TE--------QLGLTRTPIVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSL 290
Query: 395 VAVFRGHVGPVYQ-ISWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAV 450
+ G+ V+ IS+S + L SGS D +++WD RT+ + L H V +V
Sbjct: 291 KSTLTGN--KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSV 348
Query: 451 DWSPDGEK-VASGGKDRVLKLW 471
WSP E+ + SG D ++KLW
Sbjct: 349 KWSPTHEQQLISGSLDNIVKLW 370
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 54/176 (30%), Positives = 86/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH V + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 136 (52.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ I Y + + +C H + + S+ + + + +GS D T R+W L ++
Sbjct: 81 VEIEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + ++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDGSGTKFCSGSWDKMLKIW 216
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 174 (66.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 75/294 (25%), Positives = 132/294 (44%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ASGKWILSGCYDNTLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQG----KLIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S+ +E AA +G++ SG + PK + GH++
Sbjct: 216 TMLKVWSAEQE--DAA-------EGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V+ V + D + + S+D ++K+W+ + + ++ S+S +RL+L+ S
Sbjct: 254 SVSAVQWM-DASTLLTGSWDHTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTAS 311
Query: 422 KDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLKLW 471
D L+++D RT + ++ GH V V WS E + SG D KLW
Sbjct: 312 ADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Score = 170 (64.9 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 44/145 (30%), Positives = 83/145 (57%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDHTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQISWSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADE 446
G V + GH V + WS L +SG+ D+ K+WD R+ K DL GH ++
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEK 383
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V +DWS + + + SGG D ++++
Sbjct: 384 VLDIDWS-NPKYIVSGGVDNTVRVF 407
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 61/232 (26%), Positives = 101/232 (43%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW----------------DLNTQTPM 143
C + GH V SV+ SPDG + A+GS DT +++W + +TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEQEDAAEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DASTLLTGSWDHTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
D K+W+ K + +L GHG V + S + +G D+T + + S
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRVFKS 409
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 46/176 (26%), Positives = 80/176 (45%)
Query: 305 KQYSSPEEMKKAALERY--NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
K SS + + Y ++ + E+ +S D + E + +P+ + H
Sbjct: 50 KDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLL-HDDW 108
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW-SADSRL--LLS 419
V+ V S G+W+ S +D ++ LW GK + GH P+ + W S D +S
Sbjct: 109 VSAVKAS--GKWILSGCYDNTLNLWTNK-GKHILTISGHTAPIKAVDWISLDEETGRFVS 165
Query: 420 GSKDSTLKVW--DIRTQKLK--QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S+D T +W ++ + ++ GH V +V SPDG + A+G D +LK+W
Sbjct: 166 TSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVW 221
Score = 144 (55.7 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 65/251 (25%), Positives = 105/251 (41%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V S G+ + SG D T+ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAVKAS--GKWILSGCYDNTLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G S +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGLR 208
Query: 208 APCRRF-----VSASKDGDA------RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
+ V +++ DA R+ + +R I L GH +V+ V+W + T
Sbjct: 209 FATGSWDTMLKVWSAEQEDAAEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDASTLLT 268
Query: 257 GSQDCTIKVWE 267
GS D T+KVW+
Sbjct: 269 GSWDHTLKVWD 279
Score = 129 (50.5 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 46/171 (26%), Positives = 81/171 (47%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERL---- 332
L+GH V+++ L TG++DHT K + E K + I + +L
Sbjct: 248 LQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLI 307
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWV-ASASFDKSIKLWNG 389
++ S D + L++P ++ R T GH V V +S +++ S ++D KLW+
Sbjct: 308 LTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDC 367
Query: 390 TTGKFVAV-FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 439
+ K GH V I WS + + ++SG D+T++V+ R + L +D
Sbjct: 368 RSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGVDNTVRVFKSR-KALAED 416
>UNIPROTKB|B4HWV6 [details] [associations]
symbol:GM11446 "Ribosome biogenesis protein WDR12 homolog"
species:7238 "Drosophila sechellia" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH480818 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002036578.1
ProteinModelPortal:B4HWV6 EnsemblMetazoa:FBtr0194431 GeneID:6612061
KEGG:dse:Dsec_GM11446 FlyBase:FBgn0166389 Uniprot:B4HWV6
Length = 420
Score = 178 (67.7 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 45/145 (31%), Positives = 84/145 (57%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D+T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDYTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQISWSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADE 446
G V + GH V + WS L +SG+ D+ K+WD R+ K DL GH D+
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGDK 383
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V +DWS + + + SGG D ++++
Sbjct: 384 VLDIDWS-NPKYIVSGGVDNTVRVF 407
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 74/294 (25%), Positives = 131/294 (44%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ARGKWILSGCYDNSLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQGK----LIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S A L+ + ++G++ SG + PK + GH++
Sbjct: 216 TMLKVWS-------AELD--DGVEGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V+ V + D + + S+D ++K+W+ + + ++ S+S +RL+L+ S
Sbjct: 254 SVSAVQWM-DATTLLTGSWDYTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTAS 311
Query: 422 KDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLKLW 471
D L+++D RT + ++ GH V V WS E + SG D KLW
Sbjct: 312 ADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 62/232 (26%), Positives = 103/232 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLN--------------TQTPM 143
C + GH V SV+ SPDG + A+GS DT +++W +L+ +TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DATTLLTGSWDYTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
D K+W+ K + +L GHG V + S + +G D+T + + S
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGDKVLDIDWSNPKYIVSGGVDNTVRVFKS 409
Score = 155 (59.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 47/176 (26%), Positives = 75/176 (42%)
Query: 305 KQYSSPEEMKKAALERY--NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
K SS + + Y ++ + E+ +S D + E + +P+ + H
Sbjct: 50 KDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLL-HDDW 108
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW-SADSRL--LLS 419
V+ V G+W+ S +D S+ LW GK + GH P+ + W S D +S
Sbjct: 109 VSAV--KARGKWILSGCYDNSLNLWTNK-GKHILTISGHTAPIKAVDWISLDEETGRFVS 165
Query: 420 GSKDSTLKVWDIRTQKLKQDL----PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S+D T +W D GH V +V SPDG + A+G D +LK+W
Sbjct: 166 TSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVW 221
Score = 135 (52.6 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 64/256 (25%), Positives = 103/256 (40%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V G+ + SG D ++ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAV--KARGKWILSGCYDNSLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G + + +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGL- 207
Query: 208 APCRRFVSASKDGDARIWDVSL----------------RKCVICLSGHTLAVTCVKWGGD 251
RF + S D ++W L R I L GH +V+ V+W
Sbjct: 208 ----RFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA 263
Query: 252 GVIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 TTLLTGSWDYTLKVWD 279
Score = 125 (49.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 56/211 (26%), Positives = 89/211 (42%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLC 155
TI+GHT +AV ++ + + S S D T LW N + C GH+ V
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDS 199
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
++ S DG +GS L+ W + G S + +G+ + L R VS
Sbjct: 200 VSVSPDGLRFATGSWDTMLKVWSAELD--DGVEGSSKRMKESGVRTPKITLQGH-RESVS 256
Query: 216 ASKDGDARI-----WDVSLRKCVICLSGHTLAVTCVKWGGDG-------VIYTGSQDCTI 263
A + DA WD +L+ + L G ++ K D +I T S D +
Sbjct: 257 AVQWMDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLILTASADKNL 316
Query: 264 KVWE--TTQGKLIRELK-GHGHWVNSLALST 291
++++ T QG ++R GH WV ++ ST
Sbjct: 317 RLYDPRTNQGSVVRNTYLGHNAWVQTVMWST 347
Score = 124 (48.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 45/171 (26%), Positives = 81/171 (47%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERL---- 332
L+GH V+++ L TG++D+T K + E K + I + +L
Sbjct: 248 LQGHRESVSAVQWMDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLI 307
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWV-ASASFDKSIKLWNG 389
++ S D + L++P ++ R T GH V V +S +++ S ++D KLW+
Sbjct: 308 LTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDC 367
Query: 390 TTGKFVAV-FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 439
+ K GH V I WS + + ++SG D+T++V+ R + L +D
Sbjct: 368 RSPKAPLYDLLGHGDKVLDIDWS-NPKYIVSGGVDNTVRVFKSR-KALAED 416
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 266 (98.7 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 70/248 (28%), Positives = 117/248 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GHT V ++A A+GS D T+++WDL + TGH + + + S+
Sbjct: 203 ISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHP 262
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + ++ CWD ++ K N GH++ + ++ P L+ S +D R
Sbjct: 263 YLFSVGEDNKVLCWDLESNKQVRN-YYGHRQGVYSVALHPT-LDV----LFSGGRDNCVR 316
Query: 224 IWDVSLRKCVICLSGHTLAVTCVK-WGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ R + + GH + +K D + +GS D T+K+W+ G L H
Sbjct: 317 VWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKK 376
Query: 283 WVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V S+ + EY+ TGA D+ KQ+ P+ L +N I NA LVSG D
Sbjct: 377 GVRSMVIHEKEYSFATGAADNI-KQWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGD 435
Query: 338 DFTMFLWE 345
+ ++ W+
Sbjct: 436 NGSISFWD 443
Score = 207 (77.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 68/298 (22%), Positives = 136/298 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ + + F + S D ++WD++ + + L+GH A+ ++
Sbjct: 203 ISGHTGWVRAIAVDKSN-----EWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEV 257
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D + W+ K +R GH V S+AL T L +G D+ +
Sbjct: 258 SSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRV 317
Query: 307 YSSPEEMKKAALERYN----KIKG-NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ ++ + +K NA +++SGS D T+ LW+ A T +T H++
Sbjct: 318 WDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAAT-LTNHKK 376
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V + A+ + D +IK W G F+ GH + ++ +AD+ +L+SG
Sbjct: 377 GVRSMVIHEKEYSFATGAAD-NIKQWKCPDGSFIKNLSGHNSIINAMALNADN-VLVSGG 434
Query: 422 KDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGGKDRVLKLW 471
+ ++ WD +T QK + + PG + +F + + G ++ + D+ +K +
Sbjct: 435 DNGSISFWDWKTGYCFQKTQSIVQPGSLEGEAGIFDMAFDKTGSRLITCEADKTIKFY 492
Score = 195 (73.7 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 60/210 (28%), Positives = 97/210 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI-AWSADGKH 164
GH + V SVA P L SG D VR+WD+ T+ +F+ GHK +L + + +AD +
Sbjct: 289 GHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQ- 347
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
++SGS ++ WD TG S L+ HKK G+ +H F + + D + +
Sbjct: 348 VISGSMDTTVKLWDLATGT-SAATLTNHKK---GVRSMVIHEKE--YSFATGAAD-NIKQ 400
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
W + LSGH + + D V+ +G + +I W+ G ++ + V
Sbjct: 401 WKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGDNGSISFWDWKTGYCFQKTQSI---V 457
Query: 285 NSLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L E + AFD TG + + E K
Sbjct: 458 QPGSLEGEAGIFDMAFDKTGSRLITCEADK 487
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 59/208 (28%), Positives = 99/208 (47%)
Query: 272 KLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG-N 327
KL+R + GH WV ++A+ S E+ TG+ D+T K + + E+K + I+G
Sbjct: 198 KLMRVISGHTGWVRAIAVDKSNEW-FATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLE 256
Query: 328 APER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
R L S +D + W+ +KQ + GH+Q V V P + S D +
Sbjct: 257 VSSRHPYLFSVGEDNKVLCWDLESNKQVRNYY-GHRQGVYSVALHPTLDVLFSGGRDNCV 315
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI-SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGH 443
++W+ T + +GH G + + S +AD +++ SGS D+T+K+WD+ T L H
Sbjct: 316 RVWDMRTRANIFEMKGHKGTILSLKSQNADPQVI-SGSMDTTVKLWDLATGTSAATLTNH 374
Query: 444 ADEVFAVDWSPDGEKVASGGKDRVLKLW 471
V ++ A+G D + K W
Sbjct: 375 KKGVRSMVIHEKEYSFATGAADNI-KQW 401
Score = 176 (67.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH A+ + S L S D V WDL + + GH+ V +A
Sbjct: 244 TLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTL 303
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L SG + ++ WD +T + + + GHK I + + NA + +S S D
Sbjct: 304 DVLFSGGRDNCVRVWDMRT-RANIFEMKGHKGTILSLKSQ----NAD-PQVISGSMDTTV 357
Query: 223 RIWDVSLRKCVICLSGHTLAV-TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD++ L+ H V + V + TG+ D IK W+ G I+ L GH
Sbjct: 358 KLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAAD-NIKQWKCPDGSFIKNLSGHN 416
Query: 282 HWVNSLALSTEYALRTG 298
+N++AL+ + L +G
Sbjct: 417 SIINAMALNADNVLVSG 433
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 311 EEMKKAALERYNKIK-GNAPER-LVSGSDDFTMFL--WEPAVSKQPKTRMTGHQQLVNHV 366
E+ K + + YNK + R L++ + T W P K + ++GH V +
Sbjct: 156 EDDKSSQITIYNKTNTDDINNRTLINQYEPLTYTKPEWHPPW-KLMRV-ISGHTGWVRAI 213
Query: 367 YFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTL 426
+W A+ S D +IK+W+ +G+ GHV + + S+ L S +D+ +
Sbjct: 214 AVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKV 273
Query: 427 KVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
WD+ + K ++ GH V++V P + + SGG+D +++W
Sbjct: 274 LCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVW 318
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 263 (97.6 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 96/376 (25%), Positives = 164/376 (43%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 66 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 125
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 126 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 182
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 183 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 236
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 237 GTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVG 296
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ A Q
Sbjct: 297 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYDLAT--QTLRHQ 354
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
HQ + + + V + S D ++LW+ TG+ + +RGH + + S D+ L
Sbjct: 355 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASL 414
Query: 417 LLSGSKDSTLKVWDIR 432
+++ S D KV+ ++
Sbjct: 415 VVTTSGDHKAKVFCVQ 430
Score = 127 (49.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 55/209 (26%), Positives = 91/209 (43%)
Query: 239 HTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL- 295
H+ +V CV + + TG +D VW + G+L+ E GH V S + L
Sbjct: 90 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 149
Query: 296 RTGAFDHTGK--QYSSPEEM---KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
TG K Q + EE+ + LE + + AP L++G+ D ++W+ +
Sbjct: 150 ATGDMSGLLKVWQVDTKEEVWSFEAGDLE-WMEWHPRAPV-LLAGTADGNTWMWK-VPNG 206
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG---HVGPVYQ 407
KT G PDG+ D +I++W+ G + V +G H GP+
Sbjct: 207 DCKT-FQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTC 265
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
++ + D L+L+GS D K+ T K+
Sbjct: 266 VATNQDGSLILTGSVDCQAKLVSATTGKV 294
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 263 (97.6 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 96/376 (25%), Positives = 164/376 (43%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 66 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 125
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 126 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 182
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 183 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 236
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 237 GTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAANQDGSLILTGSVDCQAKLVSATTGKVVG 296
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ A Q
Sbjct: 297 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYDLAT--QTLRHQ 354
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
HQ + + + V + S D ++LW+ TG+ + +RGH + + S D+ L
Sbjct: 355 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASL 414
Query: 417 LLSGSKDSTLKVWDIR 432
+++ S D KV+ ++
Sbjct: 415 VVTTSGDHKAKVFCVQ 430
Score = 126 (49.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 55/209 (26%), Positives = 91/209 (43%)
Query: 239 HTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL- 295
H+ +V CV + + TG +D VW + G+L+ E GH V S + L
Sbjct: 90 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 149
Query: 296 RTGAFDHTGK--QYSSPEEM---KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
TG K Q + EE+ + LE + + AP L++G+ D ++W+ +
Sbjct: 150 ATGDMSGLLKVWQVDTKEEVWSFEAGDLE-WMEWHPRAPV-LLAGTADGNTWMWK-VPNG 206
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG---HVGPVYQ 407
KT G PDG+ D +I++W+ G + V +G H GP+
Sbjct: 207 DCKT-FQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTC 265
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
++ + D L+L+GS D K+ T K+
Sbjct: 266 VAANQDGSLILTGSVDCQAKLVSATTGKV 294
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 227 (85.0 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 67/226 (29%), Positives = 115/226 (50%)
Query: 107 HTEAVLSVAFSPDGRQL-ASGSGDTTVRLWDLNTQTPMF-----KCTGHKNWVLCIAWSA 160
HT+ V ++A D + + S D ++ LW L + + TGH ++V + S+
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +SGS GEL+ WD TG+ + GH K + +++ + R+ VSAS+D
Sbjct: 74 DGQFALSGSWDGELRLWDLATGETTRR-FVGHTKDVLSVAFSTDN-----RQIVSASRDR 127
Query: 221 DARIWDVSLRKCVICLS---GHTLAVTCVKWGGDGVIYT---GSQDCTIKVWETTQGKLI 274
++W+ +L +C +S GH V+CV++ + ++ T S D T+KVW KL
Sbjct: 128 TIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 275 RELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
L GH ++N++A+S + +L +G D + E K +LE
Sbjct: 187 NSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 226 (84.6 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 59/189 (31%), Positives = 95/189 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL T + GH VL +A+S D +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 164 HLVSGSKAGELQCWDPQTG-KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS S+ ++ W+ K + + GHK+W++ + + P N VSAS D
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSP---NTLVPTIVSASWDKTV 175
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W++ K L GH+ + V DG + +G +D I +W+ +GK + L+ G
Sbjct: 176 KVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-G 234
Query: 282 HWVNSLALS 290
++SL S
Sbjct: 235 SIIHSLCFS 243
Score = 222 (83.2 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 57/144 (39%), Positives = 85/144 (59%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SGS D + LW+ A + + R GH + V V FS D + + SAS D++IKLWN T G
Sbjct: 79 LSGSWDGELRLWDLATGETTR-RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLG 136
Query: 393 --KF-VAVFRGHVGPVYQISWSADSRL--LLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
K+ ++ GH V + +S ++ + ++S S D T+KVW+++ KL+ L GH+ +
Sbjct: 137 ECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYL 196
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
V SPDG ASGGKD V+ LW
Sbjct: 197 NTVAVSPDGSLCASGGKDGVILLW 220
Score = 201 (75.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 48/150 (32%), Positives = 82/150 (54%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKT------RMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+V+ S D ++ LW+ ++K K+ R+TGH V V S DGQ+ S S+D ++
Sbjct: 31 IVTASRDKSIILWK--LTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 88
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ-KLK-QDLPGH 443
LW+ TG+ F GH V +++S D+R ++S S+D T+K+W+ + K + GH
Sbjct: 89 LWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGH 148
Query: 444 ADEVFAVDWSPDG--EKVASGGKDRVLKLW 471
+ V V +SP+ + S D+ +K+W
Sbjct: 149 KEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Score = 186 (70.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 52/178 (29%), Positives = 89/178 (50%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL--NTQTPMFKCTGHKNWVLCIAWSADG- 162
GHT+ VLSVAFS D RQ+ S S D T++LW+ + + + GHK WV C+ +S +
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTL 162
Query: 163 -KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+VS S ++ W+ Q K N L GH ++ ++ P + C S KDG
Sbjct: 163 VPTIVSASWDKTVKVWNLQNCKLR-NSLVGHSGYLNTVAVSPD--GSLC---ASGGKDGV 216
Query: 222 ARIWDVSLRKCVICL-SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+WD++ K + L +G + C + + + + +I++W+ ++ +LK
Sbjct: 217 ILLWDLAEGKKLYSLEAGSIIHSLC--FSPNRYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 177 (67.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 70/268 (26%), Positives = 119/268 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
+ H +T I+ P+ N+ V+AS+D +W D S L+GH+ V
Sbjct: 11 MRAHTDIVTAIA-TPID-NSDI--IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG +GS D +++W+ G+ R GH V S+A ST+ + + + D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 302 HTGKQYSSPEEMKKAALE-----RYNKIKGNAPERLV----SGSDDFTMFLWEPAVSKQP 352
T K +++ E K E + +P LV S S D T+ +W K
Sbjct: 127 RTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL- 185
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
+ + GH +N V SPDG AS D I LW+ GK ++ G + +
Sbjct: 186 RNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHSLCFS 243
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
+R L + ++++++WD+ ++ + +DL
Sbjct: 244 PNRYWLCAATENSIRIWDLESKSVVEDL 271
Score = 64 (27.6 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 408 ISWSADSRLLLSGSKDSTLKVWDI 431
++WSAD L SG D ++VW I
Sbjct: 300 LNWSADGSTLFSGYTDGVVRVWGI 323
Score = 56 (24.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
+++WS DG + SG D V+++W
Sbjct: 299 SLNWSADGSTLFSGYTDGVVRVW 321
>FB|FBgn0032298 [details] [associations]
symbol:CG6724 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005654 EMBL:AE014134
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 HSSP:P63005 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
GeneTree:ENSGT00640000091456 EMBL:AY118871 RefSeq:NP_609452.1
UniGene:Dm.37812 ProteinModelPortal:Q9VKQ3 SMR:Q9VKQ3 IntAct:Q9VKQ3
MINT:MINT-818926 STRING:Q9VKQ3 PaxDb:Q9VKQ3 PRIDE:Q9VKQ3
EnsemblMetazoa:FBtr0080191 GeneID:34488 KEGG:dme:Dmel_CG6724
UCSC:CG6724-RA FlyBase:FBgn0032298 InParanoid:Q9VKQ3
PhylomeDB:Q9VKQ3 GenomeRNAi:34488 NextBio:788731 Bgee:Q9VKQ3
Uniprot:Q9VKQ3
Length = 420
Score = 171 (65.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 74/294 (25%), Positives = 132/294 (44%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ARGKWILSGCYDNTLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQG----KLIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S+ E+ A ++G++ SG + PK + GH++
Sbjct: 216 TMLKVWSA--ELDDA-------VEGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V+ V + D + + S+D ++K+W+ + + ++ S+S +RL+L+ S
Sbjct: 254 SVSAVQWM-DATTLLTGSWDHTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTAS 311
Query: 422 KDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLKLW 471
D L+++D RT + ++ GH V V WS E + SG D KLW
Sbjct: 312 ADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Score = 170 (64.9 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 44/145 (30%), Positives = 83/145 (57%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDHTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQISWSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADE 446
G V + GH V + WS L +SG+ D+ K+WD R+ K DL GH ++
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEK 383
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V +DWS + + + SGG D ++++
Sbjct: 384 VLDIDWS-NPKYIVSGGVDNTVRVF 407
Score = 162 (62.1 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 63/240 (26%), Positives = 107/240 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLN--------------TQTPM 143
C + GH V SV+ SPDG + A+GS DT +++W +L+ +TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DATTLLTGSWDHTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA 317
D K+W+ K + +L GHG V + S + +G D+T + + S + + + A
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRVFKSRKALAEEA 417
Score = 153 (58.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 45/176 (25%), Positives = 79/176 (44%)
Query: 305 KQYSSPEEMKKAALERY--NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
K SS + + Y ++ + E+ +S D + E + +P+ + H
Sbjct: 50 KDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLL-HDDW 108
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW-SADSRL--LLS 419
V+ V G+W+ S +D ++ LW GK + GH P+ + W S D +S
Sbjct: 109 VSAV--KARGKWILSGCYDNTLNLWTNK-GKHILTISGHTAPIKAVDWISLDEETGRFVS 165
Query: 420 GSKDSTLKVW--DIRTQKLK--QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S+D T +W ++ + ++ GH V +V SPDG + A+G D +LK+W
Sbjct: 166 TSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVW 221
Score = 143 (55.4 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 66/256 (25%), Positives = 102/256 (39%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V G+ + SG D T+ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAV--KARGKWILSGCYDNTLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G S +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGL- 207
Query: 208 APCRRFVSASKDGDARIWDVSLRKCV----------------ICLSGHTLAVTCVKWGGD 251
RF + S D ++W L V I L GH +V+ V+W
Sbjct: 208 ----RFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA 263
Query: 252 GVIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 TTLLTGSWDHTLKVWD 279
Score = 127 (49.8 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERL---- 332
L+GH V+++ L TG++DHT K + E K + I + +L
Sbjct: 248 LQGHRESVSAVQWMDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLI 307
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWV-ASASFDKSIKLWNG 389
++ S D + L++P ++ R T GH V V +S +++ S ++D KLW+
Sbjct: 308 LTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDC 367
Query: 390 TTGKFVAV-FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ K GH V I WS + + ++SG D+T++V+ R
Sbjct: 368 RSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGVDNTVRVFKSR 410
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 56/213 (26%), Positives = 92/213 (43%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLC 155
TI+GHT +AV ++ + + S S D T LW N + +C GH+ V
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDS 199
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI--TGISWEPVHLNAPCRRF 213
++ S DG +GS L+ W + + + G K + +G+ + L R
Sbjct: 200 VSVSPDGLRFATGSWDTMLKVWSAELD----DAVEGSSKRMKESGVRTPKITLQGH-RES 254
Query: 214 VSASKDGDARI-----WDVSLRKCVICLSGHTLAVTCVKWGGDG-------VIYTGSQDC 261
VSA + DA WD +L+ + L G ++ K D +I T S D
Sbjct: 255 VSAVQWMDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLILTASADK 314
Query: 262 TIKVWE--TTQGKLIRELK-GHGHWVNSLALST 291
+++++ T QG ++R GH WV ++ ST
Sbjct: 315 NLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWST 347
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 172 (65.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 66/238 (27%), Positives = 109/238 (45%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWDLN----TQTPMFKCTGHKNWVLC 155
TI+GHT +AV ++ + + S S D T LW N T + C GH+ V
Sbjct: 139 TISGHTAPIKAVDWISLDEESGRFVSSSQDQTAMLWQWNVGSNTAECVSVCKGHERGVDS 198
Query: 156 IAWSADGKHLVSGSKAGELQCW-----DPQTG-----KPSG--NP---LSGHKKWITGIS 200
++ S DG+ +GS L+ W D G K SG P L GH++ I+ +
Sbjct: 199 VSVSPDGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPKMTLQGHRESISAVQ 258
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
W ++A ++ S D ++WD+SL +S + + +I T S D
Sbjct: 259 W----MDAST--LLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSNLNRLIVTASAD 312
Query: 261 CTIKVWE--TTQGKLIRELK-GHGHWVNSLALST--EYALRTGAFDHTGKQYS--SPE 311
+++++ T QG ++R GH WV ++ ST E+ +GA+D+ K + SP+
Sbjct: 313 KNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGAYDNQNKLWDCRSPK 370
Score = 170 (64.9 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 68/266 (25%), Positives = 118/266 (44%)
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGG----DGVIYTGSQDCTIKVWETTQGKLI 274
D IW + K ++ +SGHT + V W G + SQD T +W+ G
Sbjct: 124 DNTLNIW-TNKGKHILTISGHTAPIKAVDWISLDEESGRFVSSSQDQTAMLWQWNVGSNT 182
Query: 275 REL----KGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP 329
E KGH V+S+++S + TG++D K +S+ E+ A +G +
Sbjct: 183 AECVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSA--ELDDAG-------EGTSK 233
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
SG + PK + GH++ ++ V + D + + S+D ++K+W+
Sbjct: 234 RMKESGV-------------RTPKMTLQGHRESISAVQWM-DASTLLTGSWDHTLKVWDL 279
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADE 446
+ + ++ S+S +RL+++ S D L+++D RT + ++ GH
Sbjct: 280 SLEGIKTEISTNKS-IFDASYSNLNRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAW 338
Query: 447 VFAVDWSPDGEKV-ASGGKDRVLKLW 471
V AV WS E + SG D KLW
Sbjct: 339 VQAVMWSTTEEFLFVSGAYDNQNKLW 364
Score = 168 (64.2 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 43/145 (29%), Positives = 83/145 (57%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 265 LLTGSWDHTLKVWDLSL-EGIKTEISTNKSIFDASY-SNLNRLIVTASADKNLRLYDART 322
Query: 392 --GKFVA-VFRGHVGPVYQISWSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADE 446
G V + GH V + WS L +SG+ D+ K+WD R+ K DL GH ++
Sbjct: 323 NQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEK 382
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V +DW+ + + + SGG D ++++
Sbjct: 383 VLDIDWT-NPKYIVSGGADNSVRVF 406
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 56/218 (25%), Positives = 103/218 (47%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM------KKAALERYNKIKGNAPE-RL 332
H WV+++ + ++ L TG +D+T +++ + A ++ + I + R
Sbjct: 104 HDDWVSAVKANGKWIL-TGCYDNTLNIWTNKGKHILTISGHTAPIKAVDWISLDEESGRF 162
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWN- 388
VS S D T LW+ V ++ GH++ V+ V SPDGQ A+ S+D +K+W+
Sbjct: 163 VSSSQDQTAMLWQWNVGSNTAECVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSA 222
Query: 389 -------GTTGKFVA--------VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT 433
GT+ + +GH + + W D+ LL+GS D TLKVWD+
Sbjct: 223 ELDDAGEGTSKRMKESGVRTPKMTLQGHRESISAVQWM-DASTLLTGSWDHTLKVWDLSL 281
Query: 434 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ +K ++ + +F +S + + D+ L+L+
Sbjct: 282 EGIKTEISTNKS-IFDASYSNLNRLIVTASADKNLRLY 318
Score = 164 (62.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 63/242 (26%), Positives = 110/242 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLN--------------TQTPM 143
C + GH V SV+ SPDG++ A+GS DT +++W +L+ +TP
Sbjct: 185 CVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPK 244
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ + + W D L++GS L+ WD + +S +K I S+
Sbjct: 245 MTLQGHRESISAVQWM-DASTLLTGSWDHTLKVWDLSL-EGIKTEISTNKS-IFDASYS- 300
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
+LN R V+AS D + R++D + + + GH V V W + + +G+
Sbjct: 301 -NLN---RLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGA 356
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA 317
D K+W+ K + +L GHG V + + + +G D++ + + S +KA
Sbjct: 357 YDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWTNPKYIVSGGADNSVRVFKS----RKAV 412
Query: 318 LE 319
+E
Sbjct: 413 VE 414
Score = 145 (56.1 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 61/255 (23%), Positives = 104/255 (40%)
Query: 37 QLSQIVNKLLNNEEKLP--YAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRI 94
+L+ VN LL ++ P + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNTLLQQKDGSPVDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FPA 95
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
C H + V +V +G+ + +G D T+ +W N + +GH +
Sbjct: 96 PEPQDCLL----HDDWVSAV--KANGKWILTGCYDNTLNIWT-NKGKHILTISGHTAPIK 148
Query: 155 CIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLNA 208
+ W S D + VS S+ W G + +S GH++ + +S P
Sbjct: 149 AVDWISLDEESGRFVSSSQDQTAMLWQWNVGSNTAECVSVCKGHERGVDSVSVSP----- 203
Query: 209 PCRRFVSASKDGDARIWDVSL----------------RKCVICLSGHTLAVTCVKWGGDG 252
+RF + S D ++W L R + L GH +++ V+W
Sbjct: 204 DGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPKMTLQGHRESISAVQWMDAS 263
Query: 253 VIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 TLLTGSWDHTLKVWD 278
>UNIPROTKB|B4Q9T6 [details] [associations]
symbol:GD22226 "Ribosome biogenesis protein WDR12 homolog"
species:7240 "Drosophila simulans" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CM000361 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002079018.1
ProteinModelPortal:B4Q9T6 EnsemblMetazoa:FBtr0222136 GeneID:6731883
KEGG:dsi:Dsim_GD22226 FlyBase:FBgn0193635 Uniprot:B4Q9T6
Length = 420
Score = 176 (67.0 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 45/145 (31%), Positives = 84/145 (57%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D+T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDYTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQISWSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADE 446
G V + GH V + WS L +SG+ D+ K+WD R+ K DL GH D+
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGDK 383
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V +DWS + + + SGG D ++++
Sbjct: 384 VLDIDWS-NPKYIVSGGVDNSVRVF 407
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 74/294 (25%), Positives = 131/294 (44%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ARGKWILSGCYDNSLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQGK----LIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S A L+ + ++G++ SG + PK + GH++
Sbjct: 216 TMLKVWS-------AELD--DGVEGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGS 421
V+ V + D + + S+D ++K+W+ + + ++ S+S +RL+L+ S
Sbjct: 254 SVSAVQWM-DATTLLTGSWDYTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTAS 311
Query: 422 KDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLKLW 471
D L+++D RT + ++ GH V V WS E + SG D KLW
Sbjct: 312 ADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 48/176 (27%), Positives = 75/176 (42%)
Query: 305 KQYSSPEEMKKAALERY--NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
K SS E + Y ++ + E+ +S D + E + +P+ + H
Sbjct: 50 KDGSSDTEFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLL-HDDW 108
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW-SADSRL--LLS 419
V+ V G+W+ S +D S+ LW GK + GH P+ + W S D +S
Sbjct: 109 VSAV--KARGKWILSGCYDNSLNLWTNK-GKHILTISGHTAPIKAVDWISLDEETGRFVS 165
Query: 420 GSKDSTLKVWDIRTQKLKQDL----PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S+D T +W D GH V +V SPDG + A+G D +LK+W
Sbjct: 166 TSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVW 221
Score = 153 (58.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 61/232 (26%), Positives = 103/232 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLN--------------TQTPM 143
C + GH V SV+ SPDG + A+GS DT +++W +L+ +TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DATTLLTGSWDYTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
D K+W+ K + +L GHG V + S + +G D++ + + S
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGDKVLDIDWSNPKYIVSGGVDNSVRVFKS 409
Score = 135 (52.6 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 64/256 (25%), Positives = 103/256 (40%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTEFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V G+ + SG D ++ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAV--KARGKWILSGCYDNSLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G + + +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGL- 207
Query: 208 APCRRFVSASKDGDARIWDVSL----------------RKCVICLSGHTLAVTCVKWGGD 251
RF + S D ++W L R I L GH +V+ V+W
Sbjct: 208 ----RFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA 263
Query: 252 GVIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 TTLLTGSWDYTLKVWD 279
Score = 125 (49.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 56/211 (26%), Positives = 89/211 (42%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLC 155
TI+GHT +AV ++ + + S S D T LW N + C GH+ V
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDS 199
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
++ S DG +GS L+ W + G S + +G+ + L R VS
Sbjct: 200 VSVSPDGLRFATGSWDTMLKVWSAELD--DGVEGSSKRMKESGVRTPKITLQGH-RESVS 256
Query: 216 ASKDGDARI-----WDVSLRKCVICLSGHTLAVTCVKWGGDG-------VIYTGSQDCTI 263
A + DA WD +L+ + L G ++ K D +I T S D +
Sbjct: 257 AVQWMDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLILTASADKNL 316
Query: 264 KVWE--TTQGKLIRELK-GHGHWVNSLALST 291
++++ T QG ++R GH WV ++ ST
Sbjct: 317 RLYDPRTNQGSVVRNTYLGHNAWVQTVMWST 347
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 260 (96.6 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 83/299 (27%), Positives = 146/299 (48%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 62 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 115
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 176 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 231
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGP----VYQI 408
GH V + S +G ++ S + D ++++W+ + V +F+G+V + +
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 291
Query: 409 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 467
SWS D + +GS D + VWD ++++ LPGHA + V + PD E + G R+
Sbjct: 292 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD-EPIIETGFHRI 349
Score = 249 (92.7 bits), Expect = 8.7e-19, P = 8.7e-19
Identities = 85/307 (27%), Positives = 147/307 (47%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 41 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 99
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 156
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 157 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 212
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 272
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 273 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 331
Query: 365 HVYFSPD 371
V F PD
Sbjct: 332 EVAFHPD 338
Score = 233 (87.1 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 74/262 (28%), Positives = 119/262 (45%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL--IRELKGHGHWV 284
SL+ ++ LSGH V C K+ +G + + D I +W G LKGH V
Sbjct: 54 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAV 112
Query: 285 NSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PERLVSGSD 337
L +T+ + L + + D T + S + L+ + + P+ + +GSD
Sbjct: 113 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 172
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ LW+ +T +Q L V F+ + S D IK+W+ K
Sbjct: 173 DGTVKLWDIRKKAAIQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT 230
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPG--HADE--VFA 449
RGH V +S S++ LLS + D+T++VWD+R ++ + G H E +
Sbjct: 231 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
WSPDG K+A+G DR + +W
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVW 312
Score = 193 (73.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 60/213 (28%), Positives = 100/213 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GHT V S + G QL +GS D TV+LWD+ + + + + VL + ++
Sbjct: 147 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI-QTFQNTYQVLAVTFNDTS 205
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
++SG +++ WD + K + + GH +TG+S L++ +S + D
Sbjct: 206 DQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLS-----LSSEGSYLLSNAMDNTV 259
Query: 223 RIWDVS----LRKCVICLSG--HTLAVTCVK--WGGDGV-IYTGSQDCTIKVWETTQGKL 273
R+WDV +CV G H ++ W DG I GS D + VW+TT ++
Sbjct: 260 RVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI 319
Query: 274 IRELKGHGHWVNSLALST-EYALRTGAFDHTGK 305
+ +L GH +N +A E + TG F G+
Sbjct: 320 LYKLPGHAGSINEVAFHPDEPIIETG-FHRIGQ 351
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 233 (87.1 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 49/141 (34%), Positives = 77/141 (54%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
++ S S D +++W ++P + GH+ V V +SPDG+ +AS D+ I+LW T
Sbjct: 61 QVASCSKDSIVYVWNFKPQQRP-FKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNT 119
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
++ + H G + +S+SAD LLS S D TLK+W ++ +K GH + V +
Sbjct: 120 VQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSG 179
Query: 451 DWSPDGEKVASGGKDRVLKLW 471
SPD VASG D+ + LW
Sbjct: 180 VISPDMRLVASGSDDKTVMLW 200
Score = 197 (74.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 78/283 (27%), Positives = 122/283 (43%)
Query: 39 SQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHK--VSVEKVLSIVYQPQAVFRIRP 96
S+I + ++ L +F HE ++ + K + S K SIVY V+ +P
Sbjct: 26 SKITEQQTTHDPALSRSF--RGHEDIITCADFDPKMRQVASCSKD-SIVY----VWNFKP 78
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
R GH AV V +SPDG +AS D +RLW Q+ H + +
Sbjct: 79 QQR-PFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSM 137
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI-TGISWEPVHLNAPCRRFVS 215
++SADG +L+S S L+ W Q K + +GHK W+ +G+ ++ R S
Sbjct: 138 SFSADGGYLLSSSDDKTLKLWRLQDKKFMCS-FAGHKNWVRSGV------ISPDMRLVAS 190
Query: 216 ASKDGDARIWDVSLRKCVI---------------CLSGHTLAVTCVKWGGDGV-IYTGSQ 259
S D +WD++ +K V S H V+ V + DG + + S
Sbjct: 191 GSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSF 250
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFD 301
D IK+ + KLI+ H VNS+++ T Y L + D
Sbjct: 251 DHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSD 293
Score = 176 (67.0 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 50/155 (32%), Positives = 73/155 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S SDD T+ LW K+ GH+ V SPD + VAS S DK++ LW+
Sbjct: 146 LLSSSDDKTLKLWR-LQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNF 204
Query: 392 GKFVAVFR---------------GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
K V+ + H+ V Q+ + D L+S S D +K+ DIR+ KL
Sbjct: 205 QKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKL 264
Query: 437 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
Q H +V ++ P G +AS G D +K+W
Sbjct: 265 IQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIW 299
Score = 172 (65.6 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 48/160 (30%), Positives = 74/160 (46%)
Query: 328 APE-RLV-SGSDDFTMFLWE----PAVSKQPK----------TRMTGHQQLVNHVYFSPD 371
+P+ RLV SGSDD T+ LW+ VSK + H V+ V F PD
Sbjct: 182 SPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPD 241
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
G + S+SFD IK+ + + K + + H V IS L S DS +K+WD+
Sbjct: 242 GTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDL 301
Query: 432 RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
R + L + ++ V ++ G+ A+GG + +W
Sbjct: 302 RQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 54/192 (28%), Positives = 84/192 (43%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
++CS I H A+ S++FS DG L S S D T++LW L + M GHKNWV
Sbjct: 122 SKCSI-IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGV 180
Query: 158 WSADGKHLVSGSKAGELQCWDPQ----TGKPSG-------NPLSGHKKWITGISWEPVHL 206
S D + + SGS + WD K S + ++ + + +S H
Sbjct: 181 ISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHP 240
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV 265
+ C +S+S D +I D+ K + + H V + G + + D IK+
Sbjct: 241 DGTC--LISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKI 298
Query: 266 WETTQGKLIREL 277
W+ QG+ I L
Sbjct: 299 WDLRQGRQIYTL 310
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP 404
+PA+S+ GH+ ++ F P + VAS S D + +WN + F GH G
Sbjct: 36 DPALSRS----FRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGA 91
Query: 405 VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 464
VY + +S D + S +D +++W Q + H + ++ +S DG + S
Sbjct: 92 VYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSD 151
Query: 465 DRVLKLW 471
D+ LKLW
Sbjct: 152 DKTLKLW 158
Score = 157 (60.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 37/107 (34%), Positives = 55/107 (51%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E + S D + LW+ V + + H + + FS DG ++ S+S DK++KLW
Sbjct: 102 ETIASCGQDRQIRLWQNTVQSKCSI-IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRL 160
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
KF+ F GH V S D RL+ SGS D T+ +WD+ QK+
Sbjct: 161 QDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKI 207
Score = 145 (56.1 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 47/191 (24%), Positives = 84/191 (43%)
Query: 121 RQLASGSGDTTVRLWDLNT-QTPMFKCT--GHKNWVLCIAWSADGKHLVSGSKAGELQCW 177
+Q S G+T+ ++ + T P + GH++ + C + + + S SK + W
Sbjct: 15 KQTQSKLGNTSSKITEQQTTHDPALSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVW 74
Query: 178 DPQTGKPSGNPLS--GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR-KCVI 234
+ KP P GHK + + + P S +D R+W +++ KC I
Sbjct: 75 N---FKPQQRPFKFVGHKGAVYCVKYSP-----DGETIASCGQDRQIRLWQNTVQSKCSI 126
Query: 235 CLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
+ H A+ + + DG + + S D T+K+W K + GH +WV S +S +
Sbjct: 127 -IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDM 185
Query: 294 AL-RTGAFDHT 303
L +G+ D T
Sbjct: 186 RLVASGSDDKT 196
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 56/196 (28%), Positives = 87/196 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT------------ 147
CS AGH V S SPD R +ASGS D TV LWDLN Q + K +
Sbjct: 167 CS--FAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQIN 224
Query: 148 ---GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
H + V + + DG L+S S +++ D ++ K + + H + IS +
Sbjct: 225 SYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQH-YNAHDAQVNSIS---I 280
Query: 205 HLNAPCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCT 262
H P F+ SA D +IWD+ + + L + +T V++ G + TG
Sbjct: 281 H---PTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNL 337
Query: 263 IKVWETTQGKLIRELK 278
VW+T + I+ ++
Sbjct: 338 CMVWKTNFDQNIQNIE 353
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 243 (90.6 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 50/151 (33%), Positives = 84/151 (55%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ-----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
P+ ++S S D T+ +W+ + P+ R+ GH ++ V S DG + S S+D++
Sbjct: 28 PDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQT 87
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ-KLKQDLPG 442
++LW+ GK F GH V +++SAD+R ++SGS+D T+K+W+ + K G
Sbjct: 88 LRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDG 147
Query: 443 HADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
H D V V +SP+ + S G DR +K+W
Sbjct: 148 HTDWVSCVRFSPNHSNPIIVSCGWDRTVKVW 178
Score = 223 (83.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 57/186 (30%), Positives = 87/186 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ + V S DG SGS D T+RLWDL + GH VL +A+SAD + +
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSGS+ ++ W+ GH W++ + + P H N P VS D ++W
Sbjct: 122 VSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSN-PI--IVSCGWDRTVKVW 178
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYT-GSQDCTIKVWETTQGKLIRELKGHGHWV 284
+++ K GH + V DG + T G +D +W+ GK + L+ H +
Sbjct: 179 NLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDII 237
Query: 285 NSLALS 290
N+L S
Sbjct: 238 NALCFS 243
Score = 214 (80.4 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 80/296 (27%), Positives = 129/296 (43%)
Query: 161 DGKHLVSGSKAGELQCW----DPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
D ++S S+ L W D T G P L GH +I+ + L++ +
Sbjct: 27 DPDTIISASRDKTLIVWKLTRDEDTNYGYPQKR-LYGHSHFISDVV-----LSSDGNYAL 80
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWET-TQGK 272
S S D R+WD++ K GHT V V + D I +GS+D TIK+W T + K
Sbjct: 81 SGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECK 140
Query: 273 LIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN-- 327
+ GH WV+ + S ++ + + +D T K ++ K +N
Sbjct: 141 FTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVT 200
Query: 328 -APERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+P+ + SG D LW+ K T H ++N + FSP+ W+ A + SI
Sbjct: 201 VSPDGSLCTSGGKDSKALLWDLNDGKNLYT--LEHNDIINALCFSPNRYWLCVA-YGPSI 257
Query: 385 KLWNGTTGKFVAVFRGHV-GPVYQ--------ISWSADSRLLLSGSKDSTLKVWDI 431
K+W+ K V R V P + ++WS D + L +G D+T++VW +
Sbjct: 258 KIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
Score = 211 (79.3 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 70/237 (29%), Positives = 112/237 (47%)
Query: 236 LSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQ------GKLIRELKGHGHWVNSL 287
L GH VT + I + S+D T+ VW+ T+ G + L GH H+++ +
Sbjct: 11 LIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDV 70
Query: 288 ALSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPER-LVSGSDDFT 340
LS++ YAL +G++D T + + E + K + +A R +VSGS D T
Sbjct: 71 VLSSDGNYAL-SGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKT 129
Query: 341 MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD--GQWVASASFDKSIKLWNGTTGKFVAVF 398
+ LW + + GH V+ V FSP+ + S +D+++K+WN K
Sbjct: 130 IKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNH 189
Query: 399 RGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
GH G + ++ S D L SG KDS +WD+ K L H D + A+ +SP+
Sbjct: 190 HGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPN 245
Score = 210 (79.0 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 55/142 (38%), Positives = 75/142 (52%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SGS D T+ LW+ A K + R GH + V V FS D + + S S DK+IKLWN
Sbjct: 80 LSGSWDQTLRLWDLAAGKTTR-RFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAE 138
Query: 393 -KFVAVFRGHVGPVYQISWSAD--SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
KF GH V + +S + + +++S D T+KVW++ KLK + GH +
Sbjct: 139 CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNT 198
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
V SPDG SGGKD LW
Sbjct: 199 VTVSPDGSLCTSGGKDSKALLW 220
Score = 184 (69.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/270 (27%), Positives = 118/270 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW------DVSLRKCVICLSGHTLA 242
L GH W+T I+ P + +SAS+D +W D + L GH+
Sbjct: 11 LIGHNGWVTQIATNPKDPDT----IISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHF 66
Query: 243 VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAF 300
++ V DG +GS D T+++W+ GK R +GH V S+A S + + +G+
Sbjct: 67 ISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 126
Query: 301 DHTGKQYSSPEEMKKAALE----------RYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
D T K +++ E K E R++ N P +VS D T+ +W A K
Sbjct: 127 DKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSN-PI-IVSCGWDRTVKVWNLANCK 184
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISW 410
K GH +N V SPDG S D LW+ GK + H + + +
Sbjct: 185 L-KNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCF 242
Query: 411 SADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
S + R L + ++K+WD+ +K ++L
Sbjct: 243 SPN-RYWLCVAYGPSIKIWDLACKKTVEEL 271
Score = 144 (55.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 52/184 (28%), Positives = 80/184 (43%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C TI GHT+ V V FSP+ + S D TV++W+L GH ++
Sbjct: 139 CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNT 198
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K + WD GK + L H I + + P N R ++
Sbjct: 199 VTVSPDGSLCTSGGKDSKALLWDLNDGK-NLYTLE-HNDIINALCFSP---N---RYWLC 250
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVT-------CVK--WGGDG-VIYTGSQDCTIKV 265
+ +IWD++ +K V L ++ T C+ W DG ++ G D TI+V
Sbjct: 251 VAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRV 310
Query: 266 WETT 269
W+ +
Sbjct: 311 WQVS 314
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 242 (90.2 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 48/138 (34%), Positives = 77/138 (55%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
SGS D T LW P GH V+ V F P+ ++A+ S DK+++LW+ G
Sbjct: 419 SGSHDRTARLWS-FDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 477
Query: 394 FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 453
V +F GH GPV +++S + + L S +D LK+WD+ + L ++L GH D + ++ +S
Sbjct: 478 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 537
Query: 454 PDGEKVASGGKDRVLKLW 471
PD +AS D +++W
Sbjct: 538 PDSSLIASASMDNSVRVW 555
Score = 218 (81.8 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 64/223 (28%), Positives = 108/223 (48%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH V ++ D + + S+D +I+ W+ +GH + V L +S Y+
Sbjct: 356 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP-YS 414
Query: 295 L--RTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPER-LVSGSDDFTMFLWEPA 347
L +G+ D T + +S P + L + +K + L +GS D T+ LW
Sbjct: 415 LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 474
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
+ TGH+ V + FSP+G+++ASA D+ +KLW+ +G RGH +
Sbjct: 475 QGNSVRL-FTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 533
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+++S DS L+ S S D++++VWDIR G + E+ V
Sbjct: 534 LTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGV 576
Score = 185 (70.2 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 46/128 (35%), Positives = 62/128 (48%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AGH V V F P+ LA+GS D TVRLW + TGH+ VL +A+S +GK+
Sbjct: 441 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY 500
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L S + L+ WD +G L GH IT +++ P SAS D R+
Sbjct: 501 LASAGEDQRLKLWDLASGTLY-KELRGHTDNITSLTFSP-----DSSLIASASMDNSVRV 554
Query: 225 WDVSLRKC 232
WD+ C
Sbjct: 555 WDIRNTYC 562
Score = 177 (67.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 46/163 (28%), Positives = 77/163 (47%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V + SP ASGS D T RLW + P+ GH V C+ + + +L
Sbjct: 400 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 459
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+GS ++ W Q G S +GH+ + +++ P N + SA +D ++W
Sbjct: 460 ATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP---NG--KYLASAGEDQRLKLW 513
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D++ L GHT +T + + D +I + S D +++VW+
Sbjct: 514 DLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 556
Score = 175 (66.7 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 41/140 (29%), Positives = 73/140 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S+D ++ W+ S GH V + SP + AS S D++ +LW+
Sbjct: 375 LLSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR 433
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ ++ GH+ V + + +S L +GS D T+++W + + GH V ++
Sbjct: 434 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 493
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+SP+G+ +AS G+D+ LKLW
Sbjct: 494 FSPNGKYLASAGEDQRLKLW 513
Score = 161 (61.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 52/199 (26%), Positives = 83/199 (41%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN--TQTPMFKCTGHKNWVLCIAWSAD 161
+ GH V S F D L S S D ++R WDL T T +++ + W L I S
Sbjct: 356 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI--SPY 413
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ SGS + W P +GH + + + P N+ + S D
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP---NS--NYLATGSTDKT 467
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+W V +GH V + + +G + + +D +K+W+ G L +EL+GH
Sbjct: 468 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGH 527
Query: 281 GHWVNSLALSTEYALRTGA 299
+ SL S + +L A
Sbjct: 528 TDNITSLTFSPDSSLIASA 546
Score = 151 (58.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 43/140 (30%), Positives = 67/140 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L +G D+ + LW + K + HQ V+ ++ + D + D+ +
Sbjct: 301 LAAGFDNSCIKLWS---LRSKKLKSEPHQVDVSRIHLACD---ILEEEDDE-----DDNA 349
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
G + + RGH GPVY + ADS LLS S+D +++ WD+ + GHA V+ +D
Sbjct: 350 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 409
Query: 452 WSPDGEKVASGGKDRVLKLW 471
SP ASG DR +LW
Sbjct: 410 ISPYSLYFASGSHDRTARLW 429
Score = 148 (57.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV--AVFRGHVGPVYQISWSAD 413
+ GH V F D + S S D SI+ W+ G F +++GH PV+ + S
Sbjct: 356 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAYPVWDLDISPY 413
Query: 414 SRLLLSGSKDSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S SGS D T ++W RT L+ GH +V V + P+ +A+G D+ ++LW
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 471
Score = 145 (56.1 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 49/157 (31%), Positives = 66/157 (42%)
Query: 136 DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPL-SGHKK 194
D N T M GH V + AD L+S S+ ++ WD G + L GH
Sbjct: 346 DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAY 403
Query: 195 WITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGV 253
+ + P L F S S D AR+W + +GH V CVK+
Sbjct: 404 PVWDLDISPYSLY-----FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 458
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
+ TGS D T+++W QG +R GH V SLA S
Sbjct: 459 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFS 495
Score = 67 (28.6 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 107 HTEAVLSVA-FSPDGRQLASGSGDTTVRLWDLNTQ 140
+TE +L+ A SPD + LA+G ++ ++LW L ++
Sbjct: 284 NTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK 318
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 260 (96.6 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 96/376 (25%), Positives = 164/376 (43%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 67 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 126
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 127 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 183
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 184 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 237
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFD--------HTGKQYS 308
TI++W+ QG I LKG GH + +A + + +L TG+ D TGK
Sbjct: 238 GTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAQLVSATTGKVVG 297
Query: 309 --SPEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + + + + N+ E L G D T+ +++ +S Q
Sbjct: 298 VFRPETVASQPNVGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYD--LSTQTLRHQ 355
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRL 416
HQ + + + V + S D ++LW+ TG+ + +RGH + + S D+ L
Sbjct: 356 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASL 415
Query: 417 LLSGSKDSTLKVWDIR 432
+++ S D KV+ ++
Sbjct: 416 VVTTSGDHKAKVFCVQ 431
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 54/209 (25%), Positives = 91/209 (43%)
Query: 239 HTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL- 295
H+ +V CV + + TG +D VW + G+L+ E GH V S + L
Sbjct: 91 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 150
Query: 296 RTGAFDHTGK--QYSSPEEM---KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
TG K Q + EE+ + LE + + AP L++G+ D ++W+ +
Sbjct: 151 ATGDMSGLLKVWQVDTKEEVWSFEAGDLE-WMEWHPRAPV-LLAGTADGNTWMWK-VPNG 207
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG---HVGPVYQ 407
KT G PDG+ D +I++W+ G + V +G H GP+
Sbjct: 208 DCKT-FQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTC 266
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
++ + D L+L+GS D ++ T K+
Sbjct: 267 VATNQDGSLILTGSVDCQAQLVSATTGKV 295
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 264 (98.0 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 83/304 (27%), Positives = 147/304 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
SA + GH + V++ D L +GS D T+++W ++ M+ GH V S
Sbjct: 248 SAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQ 306
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G+++VSGS ++ W G + L GH + ++ L V+ S+D
Sbjct: 307 CGRYIVSGSTDRTVKVWSTVDGSLL-HTLQGHTSTVRCMAMAGSIL-------VTGSRDT 358
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WDV + + L GH AV CV++ G V+ +G D T+K+W G+ IR L GH
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKIWNAHTGRCIRTLTGH 417
Query: 281 GHWVNSLALSTEYALR-TGAFDHTGK--QYSSPEEMKKAAL-ERYNKIKGNAPER---LV 333
+ V SL +E ++ +G+ D + + ++ PE + AL + + + R LV
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILV 477
Query: 334 SGSDDFTMFLWEPAVSKQPKTRM-TGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTT 391
S + D + +W+ + + M +GH+ + + +F + VA++S D ++KLW+
Sbjct: 478 SCNADSHVRVWD--IHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIER 533
Query: 392 GKFV 395
G +
Sbjct: 534 GALI 537
Score = 259 (96.2 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 77/265 (29%), Positives = 122/265 (46%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
V+ S D ++W + + + L GHT V + G I +GS D T+KVW T G
Sbjct: 270 VTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS 329
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP--- 329
L+ L+GH V +A++ L TG+ D T + + A L ++
Sbjct: 330 LLHTLQGHTSTVRCMAMAGSI-LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDG 388
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+VSG DFT+ +W + +T +TGH V + F + V S S D SI++W+
Sbjct: 389 TTVVSGGYDFTVKIWNAHTGRCIRT-LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF 447
Query: 390 TT--GK-FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
T G+ VA+ +GH + + +L+S + DS ++VWDI L GH
Sbjct: 448 TRPEGQECVALLQGHTSLTSGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSA 505
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
+ ++ W VA+ D +KLW
Sbjct: 506 ITSLQWF-GRNMVATSSDDGTVKLW 529
Score = 258 (95.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 71/245 (28%), Positives = 120/245 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC++ D V+ TGS D T+KVW +G+++ L GH G W + ++
Sbjct: 251 LRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVS 349
Y + +G+ D T K +S+ + L+ + + A LV+GS D T+ +W+
Sbjct: 310 YIV-SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESG 368
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
+ T + GH V V F DG V S +D ++K+WN TG+ + GH VY +
Sbjct: 369 RHLAT-LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 410 WSADSRLLLSGSKDSTLKVWDIRT---QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 466
+ ++ ++ SGS D++++VWD Q+ L GH + G + S D
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADS 483
Query: 467 VLKLW 471
+++W
Sbjct: 484 HVRVW 488
Score = 249 (92.7 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 69/212 (32%), Positives = 106/212 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH AV V F DG + SG D TV++W+ +T + TGH N V + + ++
Sbjct: 372 ATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNP----LSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ SGS ++ WD +P G L GH +G+ + N VS +
Sbjct: 430 RSIVCSGSLDTSIRVWD--FTRPEGQECVALLQGHTSLTSGMQ---LRGNI----LVSCN 480
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D R+WD+ CV LSGH A+T ++W G ++ T S D T+K+W+ +G LIR+L
Sbjct: 481 ADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDL 540
Query: 278 K-----GHGHWVNSL-ALSTEYALRTGAFDHT 303
G+G + L + ST A G+ ++T
Sbjct: 541 VTLDSGGNGGCIWRLCSTSTMLACAVGSRNNT 572
Score = 235 (87.8 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 82/321 (25%), Positives = 140/321 (43%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN 187
D + W+ N GH++ V+ C+ D LV+GS L+ W G+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYT 291
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRF-VSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
L GH TG W + C R+ VS S D ++W + L GHT V C+
Sbjct: 292 -LVGH----TGGVW--TSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM 344
Query: 247 KWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQ 306
G ++ TGS+D T++VW+ G+ + L GH V + + +G +D T K
Sbjct: 345 AMAGS-ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKI 402
Query: 307 YSSPEEMKKAALERYNKIKGNA---PERLV--SGSDDFTMFLWE--PAVSKQPKTRMTGH 359
+++ L +N + ER + SGS D ++ +W+ ++ + GH
Sbjct: 403 WNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH 462
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
L + + G + S + D +++W+ G V + GH + + W + ++ +
Sbjct: 463 TSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVAT 519
Query: 420 GSKDSTLKVWDIRTQKLKQDL 440
S D T+K+WDI L +DL
Sbjct: 520 SSDDGTVKLWDIERGALIRDL 540
Score = 147 (56.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVL 154
RC T+ GH V S+ F + + SGS DT++R+WD T+ +C GH + L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF-TRPEGQECVALLQGHTS--L 465
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
G LVS + ++ WD G + LSGH+ IT + W ++ A
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGT-CVHMLSGHRSAITSLQWFGRNMVA------ 518
Query: 215 SASKDGDARIWDV 227
++S DG ++WD+
Sbjct: 519 TSSDDGTVKLWDI 531
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 264 (98.0 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 83/304 (27%), Positives = 147/304 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
SA + GH + V++ D L +GS D T+++W ++ M+ GH V S
Sbjct: 248 SAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQ 306
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G+++VSGS ++ W G + L GH + ++ L V+ S+D
Sbjct: 307 CGRYIVSGSTDRTVKVWSTVDGSLL-HTLQGHTSTVRCMAMAGSIL-------VTGSRDT 358
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WDV + + L GH AV CV++ G V+ +G D T+K+W G+ IR L GH
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKIWNAHTGRCIRTLTGH 417
Query: 281 GHWVNSLALSTEYALR-TGAFDHTGK--QYSSPEEMKKAAL-ERYNKIKGNAPER---LV 333
+ V SL +E ++ +G+ D + + ++ PE + AL + + + R LV
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILV 477
Query: 334 SGSDDFTMFLWEPAVSKQPKTRM-TGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTT 391
S + D + +W+ + + M +GH+ + + +F + VA++S D ++KLW+
Sbjct: 478 SCNADSHVRVWD--IHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIER 533
Query: 392 GKFV 395
G +
Sbjct: 534 GALI 537
Score = 259 (96.2 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 77/265 (29%), Positives = 122/265 (46%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
V+ S D ++W + + + L GHT V + G I +GS D T+KVW T G
Sbjct: 270 VTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS 329
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP--- 329
L+ L+GH V +A++ L TG+ D T + + A L ++
Sbjct: 330 LLHTLQGHTSTVRCMAMAGSI-LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDG 388
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+VSG DFT+ +W + +T +TGH V + F + V S S D SI++W+
Sbjct: 389 TTVVSGGYDFTVKIWNAHTGRCIRT-LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF 447
Query: 390 TT--GK-FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
T G+ VA+ +GH + + +L+S + DS ++VWDI L GH
Sbjct: 448 TRPEGQECVALLQGHTSLTSGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSA 505
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
+ ++ W VA+ D +KLW
Sbjct: 506 ITSLQWF-GRNMVATSSDDGTVKLW 529
Score = 258 (95.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 71/245 (28%), Positives = 120/245 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC++ D V+ TGS D T+KVW +G+++ L GH G W + ++
Sbjct: 251 LRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVS 349
Y + +G+ D T K +S+ + L+ + + A LV+GS D T+ +W+
Sbjct: 310 YIV-SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESG 368
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
+ T + GH V V F DG V S +D ++K+WN TG+ + GH VY +
Sbjct: 369 RHLAT-LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 410 WSADSRLLLSGSKDSTLKVWDIRT---QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 466
+ ++ ++ SGS D++++VWD Q+ L GH + G + S D
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADS 483
Query: 467 VLKLW 471
+++W
Sbjct: 484 HVRVW 488
Score = 249 (92.7 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 69/212 (32%), Positives = 106/212 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH AV V F DG + SG D TV++W+ +T + TGH N V + + ++
Sbjct: 372 ATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNP----LSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ SGS ++ WD +P G L GH +G+ + N VS +
Sbjct: 430 RSIVCSGSLDTSIRVWD--FTRPEGQECVALLQGHTSLTSGMQ---LRGNI----LVSCN 480
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D R+WD+ CV LSGH A+T ++W G ++ T S D T+K+W+ +G LIR+L
Sbjct: 481 ADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDL 540
Query: 278 K-----GHGHWVNSL-ALSTEYALRTGAFDHT 303
G+G + L + ST A G+ ++T
Sbjct: 541 VTLDSGGNGGCIWRLCSTSTMLACAVGSRNNT 572
Score = 235 (87.8 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 82/321 (25%), Positives = 140/321 (43%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVL-CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN 187
D + W+ N GH++ V+ C+ D LV+GS L+ W G+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYT 291
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRF-VSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
L GH TG W + C R+ VS S D ++W + L GHT V C+
Sbjct: 292 -LVGH----TGGVW--TSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM 344
Query: 247 KWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQ 306
G ++ TGS+D T++VW+ G+ + L GH V + + +G +D T K
Sbjct: 345 AMAGS-ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKI 402
Query: 307 YSSPEEMKKAALERYNKIKGNA---PERLV--SGSDDFTMFLWE--PAVSKQPKTRMTGH 359
+++ L +N + ER + SGS D ++ +W+ ++ + GH
Sbjct: 403 WNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH 462
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
L + + G + S + D +++W+ G V + GH + + W + ++ +
Sbjct: 463 TSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVAT 519
Query: 420 GSKDSTLKVWDIRTQKLKQDL 440
S D T+K+WDI L +DL
Sbjct: 520 SSDDGTVKLWDIERGALIRDL 540
Score = 147 (56.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVL 154
RC T+ GH V S+ F + + SGS DT++R+WD T+ +C GH + L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF-TRPEGQECVALLQGHTS--L 465
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
G LVS + ++ WD G + LSGH+ IT + W ++ A
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGT-CVHMLSGHRSAITSLQWFGRNMVA------ 518
Query: 215 SASKDGDARIWDV 227
++S DG ++WD+
Sbjct: 519 TSSDDGTVKLWDI 531
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 229 (85.7 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20
Identities = 44/126 (34%), Positives = 75/126 (59%)
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN-GTTGKFVAVFRGHVGPV 405
++ QP + GH +VN F P G+++ ++S DKS +LW+ + GK + GH V
Sbjct: 374 SIETQPILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGV 433
Query: 406 YQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
IS +D LL +GS+D +++WD+R+ + GH+ +V +VDWSP+G ++AS +D
Sbjct: 434 MGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQLASSSED 493
Query: 466 RVLKLW 471
+ +W
Sbjct: 494 NTVVIW 499
Score = 222 (83.2 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 65/224 (29%), Positives = 105/224 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTP-MFKCTGHKNWVLCIAWSAD 161
++ GH++ V +F P GR + + S D + RLWDL + + GH + V+ I+ +D
Sbjct: 382 SLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSD 441
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G L +GS+ G ++ WD ++G+P GH K + + W P N + S+S+D
Sbjct: 442 GSLLATGSQDGLVRIWDLRSGRPILY-FQGHSKQVISVDWSP---NG--YQLASSSEDNT 495
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKW-------------GGDGVI-Y--TGSQDCTIKV 265
IWD+ ++ + H V+CVK+ G + Y T S D IK
Sbjct: 496 VVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKT 555
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
W + +GH V S+ L+ L T +FD T K +S+
Sbjct: 556 WSPNTWSPLATFEGHSSKVTSIDLTNSKILST-SFDKTWKIWSN 598
Score = 183 (69.5 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 48/178 (26%), Positives = 83/178 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C GH++ V+ ++ DG LA+GS D VR+WDL + P+ GH V+ + W
Sbjct: 421 KCLLDQEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDW 480
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP--VHLN------AP- 209
S +G L S S+ + WD + + S L+ H ++ + ++ N +P
Sbjct: 481 SPNGYQLASSSEDNTVVIWDIRKKEQSCQILA-HNSIVSCVKFQKQSTQTNNNNNNSSPG 539
Query: 210 CRRFVSA-SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
C +++ S DG + W + + GH+ VT + ++ T S D T K+W
Sbjct: 540 CVNYLATCSFDGKIKTWSPNTWSPLATFEGHSSKVTSIDLTNSKILST-SFDKTWKIW 596
Score = 147 (56.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+ + S+D + LW+ + GH V + DG +A+ S D +++W+ +
Sbjct: 402 ITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDGSLLATGSQDGLVRIWDLRS 461
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
G+ + F+GH V + WS + L S S+D+T+ +WDIR ++ + H V V
Sbjct: 462 GRPILYFQGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRKKEQSCQILAHNSIVSCV 520
Score = 138 (53.6 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 38/158 (24%), Positives = 72/158 (45%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
D TV + TQ P+ GH + V ++ G+++ + S + WD ++G
Sbjct: 370 DATV---SIETQ-PILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLD 425
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
GH + GIS + + + S+DG RIWD+ + ++ GH+ V V W
Sbjct: 426 QEGHSDGVMGIS-----IQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDW 480
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+G + + S+D T+ +W+ + + ++ H V+
Sbjct: 481 SPNGYQLASSSEDNTVVIWDIRKKEQSCQILAHNSIVS 518
Score = 107 (42.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 35/114 (30%), Positives = 55/114 (48%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYF-------------SPDG--QWV 375
+L S S+D T+ +W+ K+ ++ H +V+ V F S G ++
Sbjct: 486 QLASSSEDNTVVIWDIR-KKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYL 544
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
A+ SFD IK W+ T +A F GH V I + +S++L S S D T K+W
Sbjct: 545 ATCSFDGKIKTWSPNTWSPLATFEGHSSKVTSIDLT-NSKIL-STSFDKTWKIW 596
Score = 100 (40.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/155 (23%), Positives = 64/155 (41%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L +GS D + +W+ S +P GH + V V +SP+G +AS+S D ++ +W+
Sbjct: 445 LATGSQDGLVRIWDLR-SGRPILYFQGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRK 503
Query: 392 GKFVAVFRGHVGPVYQISWSADS---------------RLLLSGSKDSTLKVWDIRTQKL 436
+ H V + + S L + S D +K W T
Sbjct: 504 KEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKTWSPNTWSP 563
Query: 437 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GH+ +V ++D + K+ S D+ K+W
Sbjct: 564 LATFEGHSSKVTSIDLT--NSKILSTSFDKTWKIW 596
Score = 81 (33.6 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 116 FSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW----SADGKH 164
FSPDG+ +A GS ++W ++ Q GH V CIA+ DG H
Sbjct: 277 FSPDGKNVAIGSWSGVSKVWSVSGQKKQI-LAGHSQRVSCIAYHPLSGIDGNH 328
Score = 65 (27.9 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKW----GGDGV-------IYTGSQDCTIKV 265
S G +++W VS +K I L+GH+ V+C+ + G DG I T S D T K+
Sbjct: 288 SWSGVSKVWSVSGQKKQI-LAGHSQRVSCIAYHPLSGIDGNHTKNLVNIATTSADSTCKL 346
Query: 266 W 266
W
Sbjct: 347 W 347
Score = 59 (25.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+S DGK++ GS +G + W K L+GH + ++ I++ P+
Sbjct: 277 FSPDGKNVAIGSWSGVSKVWSVSGQKKQ--ILAGHSQRVSCIAYHPL 321
Score = 58 (25.5 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 312 EMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYF 368
+ +K + + N ++P L + S D + W P + P GH V +
Sbjct: 521 KFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKTWSPN-TWSPLATFEGHSSKVTSIDL 579
Query: 369 SPDGQWVASASFDKSIKLWN 388
+ + S SFDK+ K+W+
Sbjct: 580 T--NSKILSTSFDKTWKIWS 597
Score = 57 (25.1 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 104 IAGHTEAVLSVAFSP----DGRQ------LASGSGDTTVRLWDL 137
+AGH++ V +A+ P DG +A+ S D+T +LW L
Sbjct: 306 LAGHSQRVSCIAYHPLSGIDGNHTKNLVNIATTSADSTCKLWPL 349
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 242 (90.2 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 77/291 (26%), Positives = 131/291 (45%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI--CLSGHTLAVTCVKWG 249
H+ I + W + N +S S D ++W S + + L GH L V V
Sbjct: 15 HEDAIWSVGWGK-NSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVS 73
Query: 250 GDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQ- 306
G ++ + S D I++W+ GK IR + S+A S + L TG+ H GK
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGS--HVGKVN 131
Query: 307 -YSSPEEMKKAALERYNKIK---GNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ K+ +L+ K +P+ L SG+ D + +++ A K T + GH
Sbjct: 132 IFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT-LEGHA 190
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSG 420
+ + FSPD Q + +AS D IK++ A GH V +++S D +S
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSS 250
Query: 421 SKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S D ++KVWD+ + H D+V+ V ++ +G K+ S D+ + ++
Sbjct: 251 SSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Score = 236 (88.1 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 59/192 (30%), Positives = 95/192 (49%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+T+ GH V+SV SP G +AS S D +RLWDL + + +A+S D
Sbjct: 58 STLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPD 117
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+HL +GS G++ + +TGK + L K+I I++ P + S + DG
Sbjct: 118 SQHLATGSHVGKVNIFGVETGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDGI 171
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
I+D++ K + L GH + + + + D ++ T S D IK++E L L GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGH 231
Query: 281 GHWVNSLALSTE 292
G WV ++A S +
Sbjct: 232 GSWVLNVAFSPD 243
Score = 194 (73.4 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 56/177 (31%), Positives = 87/177 (49%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A SVAFSPD + LA+GS V ++ + T + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH 280
++V LSGH V V + D + + S D ++KVW+ + + H
Sbjct: 217 YEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 77/308 (25%), Positives = 136/308 (44%)
Query: 137 LNTQ-TPMFKCT-GHKNWVLCIAW---SADGKHLV-SGSKAGELQCWDPQTGKPS-GNPL 189
++TQ + +FK H++ + + W S DG LV SGS ++ W + + L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTL 60
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
GH+ + + P N S+S D R+WD+ K + + + V +
Sbjct: 61 EGHQLGVVSVDVSPSG-NI----MASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFS 115
Query: 250 GDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQY 307
D + TGS + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 308 SSPEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
LE + I+ +P+ LV+ SDD + ++E + T ++GH
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAAT-LSGHGSW 234
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
V +V FSPD S+S DKS+K+W+ + V F H V+ + ++ + ++S +
Sbjct: 235 VLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVAD 294
Query: 423 DSTLKVWD 430
D + V+D
Sbjct: 295 DQEIHVYD 302
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 32/124 (25%), Positives = 62/124 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++++ + +GH +WVL +A+S D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD + + + H+ + G+ + N + VS + D +
Sbjct: 245 THFVSSSSDKSVKVWDV-SARTCVHTFLDHQDQVWGVKY-----NKNGSKIVSVADDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 134 (52.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
S + L + +I V S AT++GH VL+VAFSPD S S D +V++
Sbjct: 199 SPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKV 258
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
WD++ +T + H++ V + ++ +G +VS + E+ +D
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 240 (89.5 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 48/138 (34%), Positives = 77/138 (55%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
SGS D T LW P GH V+ V F P+ ++A+ S DK+++LW+ G
Sbjct: 401 SGSHDRTARLWS-FDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 394 FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 453
V +F GH GPV +++S + + L S +D LK+WD+ + L ++L GH D + ++ +S
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 454 PDGEKVASGGKDRVLKLW 471
PD +AS D +++W
Sbjct: 520 PDSGLIASASMDNSVRVW 537
Score = 218 (81.8 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 64/223 (28%), Positives = 108/223 (48%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH V ++ D + + S+D +I+ W+ +GH + V L +S Y+
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP-YS 396
Query: 295 L--RTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPER-LVSGSDDFTMFLWEPA 347
L +G+ D T + +S P + L + +K + L +GS D T+ LW
Sbjct: 397 LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
+ TGH+ V + FSP+G+++ASA D+ +KLW+ +G RGH +
Sbjct: 457 QGNSVRL-FTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+++S DS L+ S S D++++VWDIR G + E+ V
Sbjct: 516 LTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGV 558
Score = 184 (69.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 46/128 (35%), Positives = 62/128 (48%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AGH V V F P+ LA+GS D TVRLW + TGH+ VL +A+S +GK+
Sbjct: 423 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY 482
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L S + L+ WD +G L GH IT +++ P SAS D R+
Sbjct: 483 LASAGEDQRLKLWDLASGTLY-KELRGHTDNITSLTFSP-----DSGLIASASMDNSVRV 536
Query: 225 WDVSLRKC 232
WD+ C
Sbjct: 537 WDIRNTYC 544
Score = 183 (69.5 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 47/163 (28%), Positives = 78/163 (47%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V + SP ASGS D T RLW + P+ GH V C+ + + +L
Sbjct: 382 GHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+GS ++ W Q G S +GH+ + +++ P N + SA +D ++W
Sbjct: 442 ATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP---NG--KYLASAGEDQRLKLW 495
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWE 267
D++ L GHT +T + + D G+I + S D +++VW+
Sbjct: 496 DLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWD 538
Score = 175 (66.7 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 41/140 (29%), Positives = 73/140 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S+D ++ W+ S GH V + SP + AS S D++ +LW+
Sbjct: 357 LLSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR 415
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ ++ GH+ V + + +S L +GS D T+++W + + GH V ++
Sbjct: 416 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+SP+G+ +AS G+D+ LKLW
Sbjct: 476 FSPNGKYLASAGEDQRLKLW 495
Score = 160 (61.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN--TQTPMFKCTGHKNWVLCIAWSAD 161
+ GH V S F D L S S D ++R WDL T T +++ + W L I S
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI--SPY 395
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ SGS + W P +GH + + + P N+ + S D
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP---NS--NYLATGSTDKT 449
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+W V +GH V + + +G + + +D +K+W+ G L +EL+GH
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGH 509
Query: 281 GHWVNSLALSTEYALRTGA 299
+ SL S + L A
Sbjct: 510 TDNITSLTFSPDSGLIASA 528
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 43/140 (30%), Positives = 67/140 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L +G D+ + LW + K + HQ V+ ++ + D + D+ +
Sbjct: 283 LAAGFDNSCIKLWS---LRSKKLKSEPHQVDVSRIHLACD---ILEEEDDE-----DDNA 331
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
G + + RGH GPVY + ADS LLS S+D +++ WD+ + GHA V+ +D
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 391
Query: 452 WSPDGEKVASGGKDRVLKLW 471
SP ASG DR +LW
Sbjct: 392 ISPYSLYFASGSHDRTARLW 411
Score = 148 (57.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV--AVFRGHVGPVYQISWSAD 413
+ GH V F D + S S D SI+ W+ G F +++GH PV+ + S
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAYPVWDLDISPY 395
Query: 414 SRLLLSGSKDSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S SGS D T ++W RT L+ GH +V V + P+ +A+G D+ ++LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 453
Score = 145 (56.1 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 49/157 (31%), Positives = 66/157 (42%)
Query: 136 DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPL-SGHKK 194
D N T M GH V + AD L+S S+ ++ WD G + L GH
Sbjct: 328 DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAY 385
Query: 195 WITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGV 253
+ + P L F S S D AR+W + +GH V CVK+
Sbjct: 386 PVWDLDISPYSLY-----FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
+ TGS D T+++W QG +R GH V SLA S
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFS 477
Score = 67 (28.6 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 107 HTEAVLSVA-FSPDGRQLASGSGDTTVRLWDLNTQ 140
+TE +L+ A SPD + LA+G ++ ++LW L ++
Sbjct: 266 NTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK 300
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 241 (89.9 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 77/291 (26%), Positives = 132/291 (45%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI--CLSGHTLAVTCVKWG 249
H+ I + W + N +S S D ++W S + + L GH L V V
Sbjct: 15 HEDAIWSVGWGK-NSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVS 73
Query: 250 GDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQ- 306
G ++ + S D I++W+ GK IR + S+A S + L TG+ H GK
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGS--HVGKVN 131
Query: 307 -YSSPEEMKKAALERYNKIK---GNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ K+ +L+ K +P+ L SG+ D + +++ A K T + GH
Sbjct: 132 IFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT-LEGHA 190
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSG 420
+ + FS D Q + +AS D IK+++ A GH V +++S D +S
Sbjct: 191 MPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSS 250
Query: 421 SKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S D ++KVWD+ + H D+V+ V ++ +G K+ S G D+ + ++
Sbjct: 251 SSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Score = 229 (85.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 58/192 (30%), Positives = 94/192 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH V+SV SP G +AS S D +RLWDL + + +A+S D +
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQ 119
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
HL +GS G++ + +TGK + L K+I I++ P + S + DG
Sbjct: 120 HLATGSHVGKVNIFGVETGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDGIIN 173
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
I+D++ K + L GH + + + + D ++ T S D IK+++ L L GHG
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGS 233
Query: 283 WVNSLALSTEYA 294
WV ++A S + A
Sbjct: 234 WVLNVAFSPDDA 245
Score = 174 (66.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 76/311 (24%), Positives = 135/311 (43%)
Query: 137 LNTQ-TPMFKCT-GHKNWVLCIAW---SADGKHLV-SGSKAGELQCWDPQTGKPSGN-PL 189
++TQ + +FK H++ + + W S DG LV SGS ++ W + L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWAL 60
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
GH+ + + P N S+S D R+WD+ K + + + V +
Sbjct: 61 EGHQLGVVSVDVSPSG-NI----MASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFS 115
Query: 250 GDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDH----- 302
D + TGS + ++ GK L G ++ S+A S + L +GA D
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 303 ---TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
TGK + ++ A+ + + LV+ SDD + +++ + T ++GH
Sbjct: 176 DIATGKLLHT---LEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAAT-LSGH 231
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
V +V FSPD S+S DKS+K+W+ + V F H V+ + ++ + ++S
Sbjct: 232 GSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVS 291
Query: 420 GSKDSTLKVWD 430
D + V+D
Sbjct: 292 VGDDQEIHVYD 302
Score = 141 (54.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FS D + L + S D ++++D+ + +GH +WVL +A+S D
Sbjct: 185 TLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD + + + H+ + G+ + N + VS D +
Sbjct: 245 AHFVSSSSDKSVKVWDV-SARTCVHTFLDHQDQVWGVKY-----NRNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
S + L + +I V S AT++GH VL+VAFSPD S S D +V++
Sbjct: 199 STDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKV 258
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
WD++ +T + H++ V + ++ +G +VS E+ +D
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 260 (96.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 79/309 (25%), Positives = 142/309 (45%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++ +N ++ +A T V FS D + + +V +W K GH +
Sbjct: 191 VQQINLHASQVAD-TRPVAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQA 249
Query: 154 LCI-----AWSAD---GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C A++ + ++VS S G + W P G L H + ++ +++ P
Sbjct: 250 GCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGE-LEQHPQRVSKVAFHP-- 306
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIK 264
N +A D R++D++ +K ++ GH+ +V V + DG V TG DC +
Sbjct: 307 -NG--HHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGR 363
Query: 265 VWETTQGKLIRELKGHGHWVNSLA-LSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN- 322
VW+ G+ I L GH ++S+ + Y + TG+ D++ K + + +
Sbjct: 364 VWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTS 423
Query: 323 ---KIKGNAP-ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
+++ +A + LVS S D T+ +W QP ++ GH + V SPDGQW+ S+
Sbjct: 424 VVTRVRADAAGQYLVSASFDCTLKMWS-TTGWQPLRQLQGHDTRILCVDISPDGQWMCSS 482
Query: 379 SFDKSIKLW 387
+FD++ KLW
Sbjct: 483 AFDRTFKLW 491
Score = 258 (95.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 63/207 (30%), Positives = 105/207 (50%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H + V VAF P+G LA+ D+T R++DL T+ + GH V +A+ DG +
Sbjct: 295 HPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVAL 354
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
+G + WD +TG+ L GH K I + W P N ++ S D ++WD
Sbjct: 355 TGGHDCYGRVWDMRTGRCIMF-LDGHTKEIHSVEWMP---NG--YEMITGSSDNSMKVWD 408
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ +R+ + HT VT V+ G + + S DCT+K+W TT + +R+L+GH +
Sbjct: 409 LRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRIL 468
Query: 286 SLALSTEYA-LRTGAFDHTGKQYSSPE 311
+ +S + + + AFD T K ++ +
Sbjct: 469 CVDISPDGQWMCSSAFDRTFKLWAQSD 495
Score = 221 (82.9 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 46/140 (32%), Positives = 78/140 (55%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S D T+ LW + + P + H Q V+ V F P+G +A+A FD + ++++ TT
Sbjct: 269 VVSCSYDGTVLLWSLS-QESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTT 327
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
K + GH V +++ D + L+G D +VWD+RT + L GH E+ +V+
Sbjct: 328 KKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVE 387
Query: 452 WSPDGEKVASGGKDRVLKLW 471
W P+G ++ +G D +K+W
Sbjct: 388 WMPNGYEMITGSSDNSMKVW 407
Score = 181 (68.8 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 45/178 (25%), Positives = 83/178 (46%)
Query: 299 AFDHTGKQYSSPEEMKKAALERY-NKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPK 353
++D T +S +E LE++ ++ A P L + D T +++ +K+
Sbjct: 273 SYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYD-LTTKKEL 331
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD 413
GH + V V F PDG + D ++W+ TG+ + GH ++ + W +
Sbjct: 332 LYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPN 391
Query: 414 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+++GS D+++KVWD+R ++ +P H V V G+ + S D LK+W
Sbjct: 392 GYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMW 449
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 189 (71.6 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 45/144 (31%), Positives = 76/144 (52%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+R+ S D T+ +++ A + + + H+ V FS D +++A+ S DK +K+WN
Sbjct: 628 QRIASCGADKTLQVFK-AETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNS 686
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSR--LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
TG+ V + H V ++ S LL +GS D LK+WD+ ++ + + GH + V
Sbjct: 687 MTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSV 746
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
+SPD + +AS D LKLW
Sbjct: 747 NHCRFSPDDKLLASCSADGTLKLW 770
Score = 176 (67.0 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 43/175 (24%), Positives = 84/175 (48%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + + H++ VLC A
Sbjct: 605 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 664
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+S D + + + S +++ W+ TG+ + H + + H + A+
Sbjct: 665 FSTDDRFIATCSVDKKVKIWNSMTGELV-HTYDEHSEQVNCC-----HFTNSSHHLLLAT 718
Query: 218 KDGDA--RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETT 269
D ++WD++ ++C + GHT +V ++ D + S D T+K+W+ T
Sbjct: 719 GSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDAT 773
Score = 168 (64.2 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 91/385 (23%), Positives = 160/385 (41%)
Query: 107 HTEAVLSVAFSPDGRQL--ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
H+E V F+ L A+GS D ++LWDLN + GH N V +S D K
Sbjct: 698 HSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKL 757
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L S S G L+ WD + + K++ + +P + S S DG ARI
Sbjct: 758 LASCSADGTLKLWDATSANERKS--INVKQFFLNLE-DPQEDMEVIVKCCSWSADG-ARI 813
Query: 225 WDVSLRKCVI-----------CLSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVWETTQG 271
+ K + +GH + + + SQ C +++W T
Sbjct: 814 MVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALSQYC-VELWNTDSR 872
Query: 272 KLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAA--LERYNKIKGNA 328
+ + +GH WV+ + S + + T + D T + + + + K +A L++ +
Sbjct: 873 SKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVFQE 932
Query: 329 PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
E +V D + Q +T Q V+ SP Q++A + +I++
Sbjct: 933 NEVMVLAVDHIRRLQLINGRTGQIDY-LTEAQ--VSCCCLSPHLQYIAFGDENGAIEILE 989
Query: 389 GTTGK-FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
+ F + F+ H V+ I ++AD + L+S S D+ ++VW+ + K L GH + V
Sbjct: 990 LVNNRIFQSRFQ-HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETV 1047
Query: 448 FAVDWSP-DGEKVASGGKDRVLKLW 471
D+ ++ S D +K+W
Sbjct: 1048 --KDFRLLKNSRLLSWSFDGTVKVW 1070
Score = 154 (59.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLL 418
H V H FS DGQ +AS DK+++++ TG+ + + H V ++S D R +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 673
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV--ASGGKDRVLKLW 471
+ S D +K+W+ T +L H+++V ++ + A+G D LKLW
Sbjct: 674 TCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLW 728
Score = 147 (56.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
NR + H + V + F+ D + L S S D +++W+ +F GH+ V
Sbjct: 993 NRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETVKDFR 1051
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ + L+S S G ++ W+ TG + + H+ T +S + H +F S S
Sbjct: 1052 LLKNSR-LLSWSFDGTVKVWNIITGNKEKDFVC-HQG--TVLSCDISH---DATKFSSTS 1104
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIR- 275
D A+IW L + L GH V C + D + TG + I++W + G+L+
Sbjct: 1105 ADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHL 1164
Query: 276 ----ELKG---HGHWVNSLALSTE 292
+G HG WV L S +
Sbjct: 1165 CAPLSEEGAATHGGWVTDLCFSPD 1188
Score = 145 (56.1 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 45/149 (30%), Positives = 68/149 (45%)
Query: 324 IKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
I+ A E+ L+S SDD + +W + K R GHQ+ V + + + S SFD
Sbjct: 1009 IQFTADEKTLISSSDDAEIQVWNWQLDKCIFLR--GHQETVKDFRLLKNSR-LLSWSFDG 1065
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 442
++K+WN TG F H G V S D+ S S D T K+W +L G
Sbjct: 1066 TVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRG 1125
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V +S D +A+G + +++W
Sbjct: 1126 HNGCVRCSAFSVDSTLLATGDDNGEIRIW 1154
Score = 136 (52.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 61/220 (27%), Positives = 99/220 (45%)
Query: 93 RIRPVNRCSATIAGHTEAVLSVA-FSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHK 150
R++ +N + I TEA +S SP + +A G + + + +L +F+ HK
Sbjct: 945 RLQLINGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILEL-VNNRIFQSRFQHK 1003
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V I ++AD K L+S S E+Q W+ Q K L GH++ + + N+
Sbjct: 1004 KTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF--LRGHQETVKDFR---LLKNS-- 1056
Query: 211 RRFVSASKDGDARIWDV---SLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVW 266
R +S S DG ++W++ + K +C G L+ C D ++ S D T K+W
Sbjct: 1057 -RLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLS--C-DISHDATKFSSTSADKTAKIW 1112
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGK 305
+ EL+GH V A S + L TG D G+
Sbjct: 1113 SFDLLLPLHELRGHNGCVRCSAFSVDSTLLATG--DDNGE 1150
Score = 128 (50.1 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
RL+S S D T+ +W + K + HQ V S D +S S DK+ K+W+
Sbjct: 1057 RLLSWSFDGTVKVWNIITGNKEKDFVC-HQGTVLSCDISHDATKFSSTSADKTAKIWSFD 1115
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKL--------KQDLPG 442
+ RGH G V ++S DS LL +G + +++W++ +L ++
Sbjct: 1116 LLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAAT 1175
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V + +SPDG+ + S G +K W
Sbjct: 1176 HGGWVTDLCFSPDGKMLISAGG--YIKWW 1202
Score = 113 (44.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 53/231 (22%), Positives = 94/231 (40%)
Query: 239 HTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRT 297
H V +++ D + + S D I+VW K I L+GH V L L +
Sbjct: 1002 HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETVKDFRLLKNSRLLS 1060
Query: 298 GAFDHTGKQYS--SPEEMKKAALERYNKIK---GNAPERLVSGSDDFTMFLWEPAVSKQP 352
+FD T K ++ + + K + + + + S S D T +W + P
Sbjct: 1061 WSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLL-P 1119
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVF-----RG---HVGP 404
+ GH V FS D +A+ + I++WN + G+ + + G H G
Sbjct: 1120 LHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGW 1179
Query: 405 VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
V + +S D ++L+S +K W++ T + Q + + + SPD
Sbjct: 1180 VTDLCFSPDGKMLISAG--GYIKWWNVVTGESSQTFYTNGTNLKKIHVSPD 1228
Score = 97 (39.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + FSP V LW+ ++++ + C GH +WV + +S DG
Sbjct: 838 GHHSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSF 897
Query: 166 VSGSKAGELQCWD 178
++ S ++ W+
Sbjct: 898 LTSSDDQTIRLWE 910
Score = 87 (35.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/153 (22%), Positives = 62/153 (40%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
+R S D +++ + ++ + H V C + D I T S D +K+W +
Sbjct: 628 QRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSM 687
Query: 270 QGKLIRELKGHGHWVNSLAL---STEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIK 325
G+L+ H VN S L TG+ D K + + +E + N +
Sbjct: 688 TGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVN 747
Query: 326 GN--APER--LVSGSDDFTMFLWEPAVSKQPKT 354
+P+ L S S D T+ LW+ + + K+
Sbjct: 748 HCRFSPDDKLLASCSADGTLKLWDATSANERKS 780
Score = 81 (33.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
A GH V V FSPDG + S D T+RLW+
Sbjct: 876 ADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE 910
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 175 (66.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 52/173 (30%), Positives = 79/173 (45%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
V +V S DG LASG D ++R+W ++ GH+ V + ++ G LVSGSK
Sbjct: 62 VTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSK 121
Query: 171 AGELQCWDPQTGKPSGN-PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSL 229
E+ WD T SG L GH+ IT + L +++SKDG +IWD
Sbjct: 122 DTEVIVWDIIT--ESGLFRLRGHRDQITSVK-----LLERSNHLITSSKDGFIKIWDTET 174
Query: 230 RKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
+ C+ + GH + + D + + + D I+ W + RE G G
Sbjct: 175 QHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQRE-DGSG 226
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 38/109 (34%), Positives = 61/109 (55%)
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK 422
V +V S DG +AS D SI++W+ + + AVF GH G V ++++ +L+SGSK
Sbjct: 62 VTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSK 121
Query: 423 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D+ + VWDI T+ L GH D++ +V + + KD +K+W
Sbjct: 122 DTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIW 170
Score = 168 (64.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 38/140 (27%), Positives = 67/140 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L SG D ++ +W + Q + GH+ V + F+ G + S S D + +W+ T
Sbjct: 74 LASGYSDGSIRIWSMS-DYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIIT 132
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ RGH + + S L++ SKD +K+WD TQ Q + GH + ++ +D
Sbjct: 133 ESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGID 192
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+PD ++ S D ++ W
Sbjct: 193 VNPDETRLCSCTSDNQIRFW 212
Score = 165 (63.1 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 38/126 (30%), Positives = 62/126 (49%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A GH +V ++ F+ G L SGS DT V +WD+ T++ +F+ GH++ + +
Sbjct: 95 AVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLER 154
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
HL++ SK G ++ WD +T + + GH+ I GI P R S + D
Sbjct: 155 SNHLITSSKDGFIKIWDTET-QHCIQTIVGHRNPIWGIDVNPDET-----RLCSCTSDNQ 208
Query: 222 ARIWDV 227
R W +
Sbjct: 209 IRFWRI 214
Score = 143 (55.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLK 427
+S D +++A + D ++K++ T KF GH PV + S DS L+++GS D +K
Sbjct: 539 YSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIK 598
Query: 428 VWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+W + + H D + V + P S KD+ +K W
Sbjct: 599 IWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYW 642
Score = 135 (52.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 43/167 (25%), Positives = 74/167 (44%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
VL++ +S D + LA D TV+++ +T GHK V+C+ S D +++GS
Sbjct: 534 VLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSA 593
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
++ W G H I +S+ P F+SASKD + WD
Sbjct: 594 DKNIKIWGLDYGD-CHKSFFAHDDSIMQVSFIP-----STHHFISASKDKRIKYWDADKF 647
Query: 231 KCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRE 276
+ + + H V + G G + +GS D +I+++ T+ + E
Sbjct: 648 EHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFNQTETPIFVE 694
Score = 132 (51.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLL 417
GH+ V + S D + + S DK+IK+W G F H + Q+S+ +
Sbjct: 571 GHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHF 630
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+S SKD +K WD + Q + H EV+++ G+ SG DR ++++
Sbjct: 631 ISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIF 684
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 321 YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+N++ GN LVSGS D + +W+ +++ R+ GH+ + V + ++S
Sbjct: 109 FNRL-GNI---LVSGSKDTEVIVWD-IITESGLFRLRGHRDQITSVKLLERSNHLITSSK 163
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT-QKLKQD 439
D IK+W+ T + GH P++ I + D L S + D+ ++ W I + ++ ++D
Sbjct: 164 DGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQRED 223
Query: 440 LPG 442
G
Sbjct: 224 GSG 226
Score = 113 (44.8 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 49/209 (23%), Positives = 91/209 (43%)
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYS--SPEEMKKAALERYNKIKGNAPERL--VS 334
GH + SL+LS+ + + K ++ S ++ A + Y AP L +
Sbjct: 394 GHRSDIRSLSLSSNDQMLVSTSSESVKVWNMKSLSCIRSIACD-YGLCTVFAPGNLHVIV 452
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN------ 388
G+ T+ ++E A + + + + H+ V + +PD + V S DK +K W+
Sbjct: 453 GTKTGTIEVFELASAARVAS-IKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIAS 511
Query: 389 --GTTGKFVAVFRGHV----GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 442
+ K + + V + +SAD++ L D+T+K++ T K L G
Sbjct: 512 QENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYG 571
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V +D S D + +G D+ +K+W
Sbjct: 572 HKLPVMCLDISDDSTLIITGSADKNIKIW 600
Score = 103 (41.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 24/99 (24%), Positives = 45/99 (45%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+++GS D + +W K+ H + V F P SAS DK IK W+
Sbjct: 588 IITGSADKNIKIWGLDYGDCHKS-FFAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADK 646
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
+ + H G V+ ++ + +SGS D ++++++
Sbjct: 647 FEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN 685
Score = 98 (39.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 41/146 (28%), Positives = 67/146 (45%)
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWET-TQGK 272
S DG RIW +S + +GH +VT + + G ++ +GS+D + VW+ T+
Sbjct: 76 SGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESG 135
Query: 273 LIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSP-EEMKKAALERYNKIKG---N 327
L R L+GH + S+ L L T + D K + + + + + N I G N
Sbjct: 136 LFR-LRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVN 194
Query: 328 APE-RLVSGSDDFTMFLWE-PAVSKQ 351
E RL S + D + W P+ +Q
Sbjct: 195 PDETRLCSCTSDNQIRFWRIPSNERQ 220
Score = 73 (30.8 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 42/175 (24%), Positives = 74/175 (42%)
Query: 224 IWDVSLRKCVICLSGHT----LAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELK 278
IWD LRK V+ S + VT V DG + +G D +I++W + +L
Sbjct: 41 IWD--LRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFN 98
Query: 279 GHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKG-NAPER---L 332
GH V ++ + L +G+ D + E L + ++I ER L
Sbjct: 99 GHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHL 158
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
++ S D + +W+ +T + GH+ + + +PD + S + D I+ W
Sbjct: 159 ITSSKDGFIKIWDTETQHCIQT-IVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 70 (29.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW 135
C TI GH + + +PD +L S + D +R W
Sbjct: 177 CIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 39 (18.8 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 375 VASASFDKSIKLWN-GTTGKFVAVFR 399
V+ FD + K+ +TGKFV +F+
Sbjct: 290 VSGVRFDPTNKILAVQSTGKFVDLFK 315
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 259 (96.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 80/288 (27%), Positives = 137/288 (47%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK I+ + P + ++ + S D IW+++ + GHT +T V +
Sbjct: 16 GHKDVISCADFNPNN-----KQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAP 70
Query: 251 DG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS 308
G ++ + S+D T+++W + K H V S+ S + L T + D + K +
Sbjct: 71 SGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWG 130
Query: 309 SPEEMKKAALERY-NKIKGN--APE-RLVSG-SDDFTMFLWEPAVSKQPKTRMTGHQQLV 363
+ +L R+ N ++ +P+ RL++ DD T+ LW+ + S Q T +
Sbjct: 131 VERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTS-SHQCINIFTDYGGSA 189
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
V F+ G +AS+ D +IK+W+ T K + ++ H V S+ L+SGS D
Sbjct: 190 TFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSD 249
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
ST+K+ D+ +L L GH V V +S DG+ ASGG D + +W
Sbjct: 250 STIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 243 (90.6 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 74/293 (25%), Positives = 135/293 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + + F+P+ +QLA+GS D ++ +W+L + F+ GH + + + ++ G +
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLV 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S S+ ++ W P K H S VH + +R V+AS D ++W
Sbjct: 76 ASSSRDQTVRLWTPSI-KGESTVFKAHTA-----SVRSVHFSRDGQRLVTASDDKSVKVW 129
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
V +K + L+ HT V C ++ DG +I + D T+++W+T+ + I +G
Sbjct: 130 GVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSA 189
Query: 285 NSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NA----PER--LVS 334
+ S+ + + D+T K + +++ L ++ K+ N P L+S
Sbjct: 190 TFVDFNSSGTCIASSGADNTIKIW----DIRTNKLIQHYKVHNAGVNCFSFHPSGNYLIS 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T+ + + + T + GH+ V V FS DG AS D + +W
Sbjct: 246 GSSDSTIKILDLLEGRLIYT-LHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 224 (83.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 64/220 (29%), Positives = 102/220 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLNTQTPMFKCTG 148
++ + P R + GHT+ + V F+P G +AS S D TVRLW + ++ +FK
Sbjct: 44 IWNLAPKARAFRFV-GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKA-- 100
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V + +S DG+ LV+ S ++ W + K + L+ H W+ + P
Sbjct: 101 HTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYS-LNRHTNWVRCARFSP----- 154
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R S D R+WD S +C+ + + + T V + G I + D TIK+W+
Sbjct: 155 DGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD 214
Query: 268 TTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
KLI+ K H VN + S Y + +G+ D T K
Sbjct: 215 IRTNKLIQHYKVHNAGVNCFSFHPSGNYLI-SGSSDSTIK 253
Score = 216 (81.1 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 53/181 (29%), Positives = 85/181 (46%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT +V SV FS DG++L + S D +V++W + + ++ H NWV C +S
Sbjct: 95 STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ + S ++ WD + + N + + G S V N+ S+ D
Sbjct: 155 DGRLIASCGDDRTVRLWDTSSHQCI-NIFTDY-----GGSATFVDFNSSGTCIASSGADN 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+IWD+ K + H V C + G + +GS D TIK+ + +G+LI L G
Sbjct: 209 TIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHG 268
Query: 280 H 280
H
Sbjct: 269 H 269
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 21/74 (28%), Positives = 42/74 (56%)
Query: 398 FRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 457
F+GH + ++ +++ L +GS D +L +W++ + GH D + V+++P G
Sbjct: 14 FKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGS 73
Query: 458 KVASGGKDRVLKLW 471
VAS +D+ ++LW
Sbjct: 74 LVASSSRDQTVRLW 87
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 222 (83.2 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 59/202 (29%), Positives = 98/202 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL + GH VL +A+S D +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 164 HLVSGSKAGELQCWDP--QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+VS S+ ++ W+ + GH+ W++ + + P L P VSAS D
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ-PT--IVSASWDKT 175
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH 280
++W++S K L+GHT V+ V DG + +G +D + +W+ +GK + L+ +
Sbjct: 176 VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN 235
Query: 281 GHWVNSLALSTEYALRTGAFDH 302
+++L S A +H
Sbjct: 236 SV-IHALCFSPNRYWLCAATEH 256
Score = 222 (83.2 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 70/231 (30%), Positives = 117/231 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQL-ASGSGDTTVRLWDLNTQTPMF-----KCTGHKNWVLCI 156
T+ HT+ V ++A D + S S D ++ LW L + + TGH ++V +
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+DG+ +SGS GEL+ WD G S GH K + +++ L+ R+ VSA
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAGV-STRRFVGHTKDVLSVAFS---LDN--RQIVSA 123
Query: 217 SKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGV---IYTGSQDCTIKVWETT 269
S+D ++W+ +L +C +S GH V+CV++ + + I + S D T+KVW +
Sbjct: 124 SRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 270 QGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
KL L GH +V+++A+S + +L +G D + E K +LE
Sbjct: 183 NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 233
Score = 211 (79.3 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 57/145 (39%), Positives = 78/145 (53%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SGS D + LW+ A + R GH + V V FS D + + SAS D++IKLWN T G
Sbjct: 79 LSGSWDGELRLWDLAAGVSTR-RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN-TLG 136
Query: 393 KFVAVF----RGHVGPVYQISWSADSR--LLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
+ GH V + +S ++ ++S S D T+KVW++ KL+ L GH
Sbjct: 137 ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY 196
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V V SPDG ASGGKD V+ LW
Sbjct: 197 VSTVAVSPDGSLCASGGKDGVVLLW 221
Score = 200 (75.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 48/151 (31%), Positives = 80/151 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKT------RMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+VS S D ++ LW+ ++K K R+TGH V V S DGQ+ S S+D ++
Sbjct: 31 IVSASRDKSIILWK--LTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 88
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ---KLKQDLPG 442
LW+ G F GH V +++S D+R ++S S+D T+K+W+ + + + G
Sbjct: 89 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEG 148
Query: 443 HADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
H D V V +SP+ + + S D+ +K+W
Sbjct: 149 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
Score = 175 (66.7 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 49/178 (27%), Positives = 89/178 (50%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQ---TPMFKCTGHKNWVLCIAWSADG 162
GHT+ VLSVAFS D RQ+ S S D T++LW+ + T GH++WV C+ +S +
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 162
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+VS S ++ W+ K L+GH +++ ++ P + C S KDG
Sbjct: 163 LQPTIVSASWDKTVKVWNLSNCKLRST-LAGHTGYVSTVAVSPD--GSLC---ASGGKDG 216
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+WD++ K + L +++ + + + + + + IK+W+ ++ +LK
Sbjct: 217 VVLLWDLAEGKKLYSLEANSV-IHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 166 (63.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 70/269 (26%), Positives = 118/269 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
+ H +T I+ P+ NA VSAS+D +W D + L+GH+ V
Sbjct: 11 MRAHTDMVTAIA-TPID-NADI--IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG +GS D +++W+ G R GH V S+A S + + + + D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD 126
Query: 302 HTGKQYSSPEEMKKAALERYN---------KIKGNAPE-RLVSGSDDFTMFLWEPAVSKQ 351
T K +++ E K E + N + +VS S D T+ +W + K
Sbjct: 127 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 186
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
T + GH V+ V SPDG AS D + LW+ GK + + ++ + +S
Sbjct: 187 RST-LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFS 244
Query: 412 ADSRLLLSGSKDSTLKVWDIRTQKLKQDL 440
+ R L + + +K+WD+ ++ + +DL
Sbjct: 245 PN-RYWLCAATEHGIKIWDLESKSIVEDL 272
Score = 106 (42.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+T+AGHT V +VA SPDG ASG D V LWDL ++ + + + + +S +
Sbjct: 188 STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSPN 246
Query: 162 GKHLVSGSKAGELQCWD 178
L + ++ G ++ WD
Sbjct: 247 RYWLCAATEHG-IKIWD 262
Score = 65 (27.9 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 408 ISWSADSRLLLSGSKDSTLKVWDI 431
++WSAD L SG D ++VW I
Sbjct: 301 LNWSADGSTLFSGYTDGVIRVWGI 324
Score = 62 (26.9 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 410 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE----VF--AVDWSPDGEKVASGG 463
W +S+ ++ +D LKV D++ + K D G A ++ +++WS DG + SG
Sbjct: 261 WDLESKSIV---ED--LKV-DLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY 314
Query: 464 KDRVLKLW 471
D V+++W
Sbjct: 315 TDGVIRVW 322
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 246 (91.7 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 50/139 (35%), Positives = 77/139 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
VSG D LW QP GH VN F P+ +VA+ S D++++LW+ G
Sbjct: 361 VSGGHDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 419
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
V +F GH GP++ +++S + R L +G+ D + +WDI + +L GH D V ++ +
Sbjct: 420 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF 479
Query: 453 SPDGEKVASGGKDRVLKLW 471
S DGE +ASG D ++LW
Sbjct: 480 SRDGEILASGSMDNTVRLW 498
Score = 217 (81.4 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 62/200 (31%), Positives = 92/200 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ V +FSPD L S S D TVRLW L T T + GH V +S G +
Sbjct: 301 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 360
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSG + W +P +GH + ++ H N+ + S D R+W
Sbjct: 361 VSGGHDRVARLWATDHYQPL-RIFAGH---LADVNCTRFHPNS--NYVATGSADRTVRLW 414
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
DV CV +GH + + + +G + TG+ D + +W+ G ++ ELKGH V
Sbjct: 415 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV 474
Query: 285 NSLALSTE-YALRTGAFDHT 303
SL S + L +G+ D+T
Sbjct: 475 CSLRFSRDGEILASGSMDNT 494
Score = 191 (72.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 58/221 (26%), Positives = 102/221 (46%)
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIR 275
S D RI D + L GH+ V + D + + S+D T+++W +
Sbjct: 280 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 339
Query: 276 ELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPE 330
KGH + V S Y +G D + +++ P + L N + +
Sbjct: 340 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 399
Query: 331 RLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
V+ GS D T+ LW+ ++ TGH+ ++ + FSP+G+++A+ + D + LW+
Sbjct: 400 NYVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 458
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
G V +GH V + +S D +L SGS D+T+++WD
Sbjct: 459 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 184 (69.8 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 48/172 (27%), Positives = 76/172 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH V FSP G SG D RLW + P+ GH V C +
Sbjct: 337 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 396
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ ++ +GS ++ WD G +GHK I +++ P N R + + D
Sbjct: 397 PNSNYVATGSADRTVRLWDVLNGN-CVRIFTGHKGPIHSLTFSP---NG--RFLATGATD 450
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQ 270
G +WD+ V L GHT V +++ DG ++ +GS D T+++W+ +
Sbjct: 451 GRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 502
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 65/245 (26%), Positives = 109/245 (44%)
Query: 236 LSGHTLAVTCVKWGGDGVIYTGS-QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L+ + +T V D + G D T++VW T KL R +K ++ + ++
Sbjct: 226 LNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-RSVKQAAD-LSLIDKESDDV 283
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSK 350
L + T + K + G + P+R L+S S+D T+ LW S
Sbjct: 284 LERIMDEKTASEL-------KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW----SL 332
Query: 351 QPKTRMTG---HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
Q T + G H V FSP G + S D+ +LW + + +F GH+ V
Sbjct: 333 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 392
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD-R 466
+ +S + +GS D T+++WD+ + GH + ++ +SP+G +A+G D R
Sbjct: 393 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 452
Query: 467 VLKLW 471
VL LW
Sbjct: 453 VL-LW 456
Score = 168 (64.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 68/264 (25%), Positives = 110/264 (41%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG 172
SV + D + S D R+ D T + + GH V ++S D +L+S S+ G
Sbjct: 266 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 325
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
++ W QT L G+K + W+ + FVS D AR+W +
Sbjct: 326 TVRLWSLQTF----TCLVGYKGHNYPV-WD-TQFSPYGYYFVSGGHDRVARLWATDHYQP 379
Query: 233 VICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST 291
+ +GH V C ++ + TGS D T+++W+ G +R GH ++SL S
Sbjct: 380 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 439
Query: 292 EYA-LRTGAFDHTGKQYSSPEEMKKAALERYN----KIKGNAP-ERLVSGSDDFTMFLWE 345
L TGA D + + L+ + ++ + E L SGS D T+ LW+
Sbjct: 440 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Query: 346 PAVSKQPKTRMTGHQQLVNHVYFS 369
AV Q+L+ Y +
Sbjct: 500 -AVKAFEDLETDNSQELLLGTYMT 522
Score = 56 (24.8 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRP---VNRCSAT-IAGHTEAVLSVAFSPDG 120
+PL + K+ +K++++ + V R+ P + C T + + + + +V + D
Sbjct: 186 IPLPELKDSDKL--DKIMNMKETTKRV-RLGPDCLPSICFYTFLNAYQQGLTAVDVTDDS 242
Query: 121 RQLASGSGDTTVRLWDL 137
+A G D+TVR+W +
Sbjct: 243 SLIAGGFADSTVRVWSV 259
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 246 (91.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 48/139 (34%), Positives = 77/139 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
VSG D LW QP GH V F P+ ++A+ S D++++LW+ G
Sbjct: 581 VSGGHDRVARLWATD-HYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNG 639
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
V +F GH GP++ +++S + R L +G+ D + +WDI + +L GH D ++A+ +
Sbjct: 640 NCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRF 699
Query: 453 SPDGEKVASGGKDRVLKLW 471
S DGE +ASG D ++LW
Sbjct: 700 SRDGEILASGSMDNTVRLW 718
Score = 219 (82.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 65/229 (28%), Positives = 103/229 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ V +FSPD L S S D TVRLW L T T + GH V +S G +
Sbjct: 521 GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 580
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSG + W +P +GH +T + P N+ + S D R+W
Sbjct: 581 VSGGHDRVARLWATDHYQPL-RIFAGHLADVTCTRFHP---NS--NYIATGSADRTVRLW 634
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
DV CV +GH + + + +G + TG+ D + +W+ G ++ ELKGH +
Sbjct: 635 DVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTI 694
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG--NAPE 330
+L S + L +G+ D+T + + + + + + + G N PE
Sbjct: 695 YALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPE 743
Score = 188 (71.2 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 56/221 (25%), Positives = 102/221 (46%)
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIR 275
S D RI D + L GH+ V + D + + S+D T+++W +
Sbjct: 500 SDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLV 559
Query: 276 ELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPE 330
KGH + V S Y +G D + +++ P + L + +
Sbjct: 560 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNS 619
Query: 331 RLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
++ GS D T+ LW+ ++ TGH+ ++ + FSP+G+++A+ + D + LW+
Sbjct: 620 NYIATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
G V +GH +Y + +S D +L SGS D+T+++WD
Sbjct: 679 GHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 186 (70.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 47/172 (27%), Positives = 76/172 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH V FSP G SG D RLW + P+ GH V C +
Sbjct: 557 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFH 616
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ ++ +GS ++ WD G +GHK I +++ P N R + + D
Sbjct: 617 PNSNYIATGSADRTVRLWDVLNGN-CVRIFTGHKGPIHSLAFSP---NG--RFLATGATD 670
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQ 270
G +WD+ V L GHT + +++ DG ++ +GS D T+++W+ +
Sbjct: 671 GRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVK 722
Score = 177 (67.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 62/227 (27%), Positives = 103/227 (45%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+I G D T++VW T KL R +K ++ + ++ L + T +
Sbjct: 464 MIVGGFADSTVRVWSVTPKKL-RSVKAAAD-LSLIDKESDDVLERIMDEKTASEL----- 516
Query: 313 MKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTG---HQQLVNH 365
K + G + P+R L+S S+D T+ LW S Q T + G H V
Sbjct: 517 --KILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLW----SLQTFTCLVGYKGHNYPVWD 570
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDST 425
FSP G + S D+ +LW + + +F GH+ V + +S + +GS D T
Sbjct: 571 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRT 630
Query: 426 LKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD-RVLKLW 471
+++WD+ + GH + ++ +SP+G +A+G D RVL LW
Sbjct: 631 VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVL-LW 676
Score = 172 (65.6 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 71/262 (27%), Positives = 110/262 (41%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG 172
SV + D + S D R+ D T + + GH V ++S D +L+S S+ G
Sbjct: 486 SVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDG 545
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
++ W QT L G+K + W+ + FVS D AR+W +
Sbjct: 546 TVRLWSLQTF----TCLVGYKGHNYPV-WD-TQFSPYGYYFVSGGHDRVARLWATDHYQP 599
Query: 233 VICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST 291
+ +GH VTC ++ I TGS D T+++W+ G +R GH ++SLA S
Sbjct: 600 LRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP 659
Query: 292 EYA-LRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAP-ERLVSGSDDFTMFLWE 345
L TGA D + + L+ + ++ + E L SGS D T+ LW+
Sbjct: 660 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Query: 346 PA-----VSKQPKTRMTGHQQL 362
+ T TGH L
Sbjct: 720 AVKAFEDLETDDFTTATGHINL 741
Score = 62 (26.9 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHT-----EAVLSVAFSPD 119
+PL + K+ +KV+++ +A R+R C +I +T + + +V + D
Sbjct: 407 IPLPELKDSDKL--DKVMNM---KEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDD 461
Query: 120 GRQLASGSGDTTVRLWDL 137
+ G D+TVR+W +
Sbjct: 462 SSMIVGGFADSTVRVWSV 479
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 241 (89.9 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 48/138 (34%), Positives = 77/138 (55%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
SGS D T LW P GH V+ V F P+ ++A+ S DK+++LW+ G
Sbjct: 401 SGSHDRTARLWS-FDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 394 FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 453
V +F GH GPV +++S + + L S +D LK+WD+ + L ++L GH D + ++ +S
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFS 519
Query: 454 PDGEKVASGGKDRVLKLW 471
PD +AS D +++W
Sbjct: 520 PDSSLIASASMDNSVRVW 537
Score = 217 (81.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 63/223 (28%), Positives = 108/223 (48%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH V ++ D + + S+D +I+ W+ +GH + V + +S Y+
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISP-YS 396
Query: 295 L--RTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPER-LVSGSDDFTMFLWEPA 347
L +G+ D T + +S P + L + +K + L +GS D T+ LW
Sbjct: 397 LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
+ TGH+ V + FSP+G+++ASA D+ +KLW+ +G RGH +
Sbjct: 457 QGNSVRL-FTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITS 515
Query: 408 ISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+++S DS L+ S S D++++VWDIR G + E+ V
Sbjct: 516 LTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGV 558
Score = 186 (70.5 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 46/128 (35%), Positives = 62/128 (48%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AGH V V F P+ LA+GS D TVRLW + TGH+ VL +A+S +GK+
Sbjct: 423 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY 482
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L S + L+ WD +G L GH IT +++ P SAS D R+
Sbjct: 483 LASAGEDQRLKLWDLASGTLF-KELRGHTDNITSLTFSP-----DSSLIASASMDNSVRV 536
Query: 225 WDVSLRKC 232
WD+ C
Sbjct: 537 WDIRNTHC 544
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 47/163 (28%), Positives = 77/163 (47%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V V SP ASGS D T RLW + P+ GH V C+ + + +L
Sbjct: 382 GHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+GS ++ W Q G S +GH+ + +++ P N + SA +D ++W
Sbjct: 442 ATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP---NG--KYLASAGEDQRLKLW 495
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D++ L GHT +T + + D +I + S D +++VW+
Sbjct: 496 DLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 178 (67.7 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 42/140 (30%), Positives = 73/140 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S+D ++ W+ S GH V V SP + AS S D++ +LW+
Sbjct: 357 LLSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDR 415
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ ++ GH+ V + + +S L +GS D T+++W + + GH V ++
Sbjct: 416 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+SP+G+ +AS G+D+ LKLW
Sbjct: 476 FSPNGKYLASAGEDQRLKLW 495
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 57/230 (24%), Positives = 91/230 (39%)
Query: 72 EKHKVSVEKV-LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
E H+V V ++ L+ + V + GH V S F D L S S D
Sbjct: 305 EPHRVDVSRIHLACDILEEEDDEDDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDM 364
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLS 190
++R WDL + T GH V + S + SGS + W P +
Sbjct: 365 SIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPL-RIYA 423
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GH + + + P N+ + S D R+W V +GH V + +
Sbjct: 424 GHLADVDCVKFHP---NS--NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSP 478
Query: 251 DG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGA 299
+G + + +D +K+W+ G L +EL+GH + SL S + +L A
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASA 528
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 52/192 (27%), Positives = 86/192 (44%)
Query: 284 VNSLALSTEYALRTGAFDHTG-KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
+N+ +S E L FD++ K +S + K R + + + ++ DD
Sbjct: 271 LNTAEISPESKLLAAGFDNSCIKLWSLRSKKLKPEPHRVDVSRIHLACDILEEEDDE--- 327
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV--AVFRG 400
+ V + K + GH V F D + S S D SI+ W+ G F +++G
Sbjct: 328 --DDDVGTEMKV-LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQG 382
Query: 401 HVGPVYQISWSADSRLLLSGSKDSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSPDGEKV 459
H PV+ + S S SGS D T ++W RT L+ GH +V V + P+ +
Sbjct: 383 HAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYL 441
Query: 460 ASGGKDRVLKLW 471
A+G D+ ++LW
Sbjct: 442 ATGSTDKTVRLW 453
Score = 63 (27.2 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 107 HTEAVLSVA-FSPDGRQLASGSGDTTVRLWDLNTQ 140
+TE +L+ A SP+ + LA+G ++ ++LW L ++
Sbjct: 266 NTEQLLNTAEISPESKLLAAGFDNSCIKLWSLRSK 300
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 187 (70.9 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 51/171 (29%), Positives = 82/171 (47%)
Query: 308 SSPEEMKKAALER-----YNKIKGNAPERLVS-GSDDFTMFLWE-PAVSKQPKTRMTGHQ 360
S PE + ER N + + ++L++ GS D LW P S TGH+
Sbjct: 475 SGPETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGV--FTGHK 532
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSG 420
+ + V FSP Q +A++S D ++KLW + F GH V +I + + LLSG
Sbjct: 533 RGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSG 592
Query: 421 SKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D LK+W I+T + + L GH D+++ + + + V + D + LW
Sbjct: 593 GSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 183 (69.5 bits), Expect = 5.7e-19, Sum P(2) = 5.7e-19
Identities = 48/155 (30%), Positives = 79/155 (50%)
Query: 332 LVSGSDDFTMFLW---EPAVSKQ-------PKT---RMT--GHQQLVNHVYFSPDGQWVA 376
+V+ S D T+ +W E SK P+T +MT GH + +N V SP+ + +A
Sbjct: 447 VVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPNDKLIA 506
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
+ S D+ KLW+ + VF GH ++ + +S ++L + S D TLK+W ++
Sbjct: 507 TGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSC 566
Query: 437 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ GH V + + G ++ SGG D +LKLW
Sbjct: 567 LKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLW 601
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 47/170 (27%), Positives = 76/170 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH + + SVA SP+ + +A+GS D +LW + + TGHK + C+ +S
Sbjct: 485 TERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVD 544
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ L + S G L+ W Q GH + I + V + +S DG
Sbjct: 545 QILATSSADGTLKLWGLQDFSCL-KTFEGHDASVLKIIF--VSRGT---QLLSGGSDGLL 598
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG-----GDGVIYTGSQDCTIKVWE 267
++W + +CV L GH + WG D ++ T S D +I +W+
Sbjct: 599 KLWTIKTNECVKTLDGHEDKI----WGLHTNKQDDMVVTASSDSSITLWK 644
Score = 151 (58.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E LV+GS + W ++ +T H V + F +A+ D +IK+W+
Sbjct: 80 EVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDM 139
Query: 390 TTGKFVAVFRGHVGPVYQISWSAD-SRL-LLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 447
+G G V+ + + D SRL L S S D +++WD+ + K L GH V
Sbjct: 140 IKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAV 199
Query: 448 FAVDWSPDGEKVASGGKDRVLKLW 471
++ ++ DG + S G+D++ +W
Sbjct: 200 TSLAFTADGNTLISSGRDKICMVW 223
Score = 149 (57.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVA--SASFDKSIKLWN 388
L +G D T+ +W+ + KQ T + G +V+ V F PD + S+S D I++W+
Sbjct: 125 LATGGCDSTIKIWD--MIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWD 182
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
+ K VAV GH V ++++AD L+S +D VW+++T++ + +P +
Sbjct: 183 LNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESVEA 242
Query: 449 AV------DWSPDGEK-----VASGGKDRVLKLW 471
AV D+S G K + G VLK+W
Sbjct: 243 AVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVW 276
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 62/260 (23%), Positives = 108/260 (41%)
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL 273
S+S D RIWD++ KCV L GH AVT + + DG + + +D VW +
Sbjct: 171 SSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRES 230
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLV 333
IR + + V + L E G F G + + A + K+ A V
Sbjct: 231 IRTIPIYES-VEAAVLLPEQ----GDFSQLGVKKQGLHFLT-AGSKGVLKVWEVATAACV 284
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
F EP S++ + H + H P+ + + S + +I ++ T +
Sbjct: 285 YSQP--VPF--EPVESEEEASE---HS--LTHCMLVPERNEIVTVSVEHNIVFYDAQTLQ 335
Query: 394 FVAVFRGHVGPVYQISW--SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
G+ V + + DS ++++ + LKV+++ T Q L GH + + A+D
Sbjct: 336 LRKQLAGYNDEVLDVKFLGPGDSHIVVA-TNSPQLKVFELSTSHC-QILYGHTETILALD 393
Query: 452 WSPDGEKVASGGKDRVLKLW 471
G S KD+ +++W
Sbjct: 394 VFRKGLMFVSCAKDKSIRVW 413
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG-HVGPVYQISWSADSRLLL 418
Q+ + SPD + + + S +K WN + V ++ H+ PV + + + S LL
Sbjct: 67 QEDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLA 126
Query: 419 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA--SGGKDRVLKLW 471
+G DST+K+WD+ Q +L G + V V++ PD ++ S D +++W
Sbjct: 127 TGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIW 181
Score = 126 (49.4 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 44/172 (25%), Positives = 72/172 (41%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDL--NTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
E + S SPD L +GS ++ W+ N +K H V + + + L
Sbjct: 68 EDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAV-HIAPVATMVFDSTSTLLA 126
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
+G ++ WD + N L G + + + P + + S+S D RIWD
Sbjct: 127 TGGCDSTIKIWDMIKQYCTHN-LKGSSGVVHLVEFHP---DISRLQLFSSSMDYKIRIWD 182
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
++ KCV L GH AVT + + DG + + +D VW + IR +
Sbjct: 183 LNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTI 234
Score = 125 (49.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 40/175 (22%), Positives = 78/175 (44%)
Query: 278 KGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPER- 331
+GH +NS+A+S + + TG+ D K +S P+ + + ++ + ++
Sbjct: 487 RGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQI 546
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L + S D T+ LW KT GH V + F G + S D +KLW T
Sbjct: 547 LATSSADGTLKLWGLQDFSCLKT-FEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKT 605
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
+ V GH ++ + + ++++ S DS++ +W T+ +++ +E
Sbjct: 606 NECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDVTEIEQEEAQAKREE 660
Score = 124 (48.7 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPD-GR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
C+ + G + V V F PD R QL S S D +R+WDLN+ + GH + V +A
Sbjct: 144 CTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLA 203
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI------SWEPVHLNAPCR 211
++ADG L+S + W+ +T + S + ++ + + + +
Sbjct: 204 FTADGNTLISSGRDKICMVWNLKT-RESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGL 262
Query: 212 RFVSASKDGDARIWDVSLRKCV 233
F++A G ++W+V+ CV
Sbjct: 263 HFLTAGSKGVLKVWEVATAACV 284
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 50/211 (23%), Positives = 96/211 (45%)
Query: 88 PQA-VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC 146
PQ VF + + C + GHTE +L++ G S + D ++R+W +N + C
Sbjct: 367 PQLKVFELS-TSHCQI-LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVV-C 423
Query: 147 T----GHKNWVLCIAWSA-DGKHLVSGSKAGELQCWD-PQ--TGKPSGNPLSGHKKWITG 198
GH + V ++ S +V+ S+ ++ W+ P+ T K +SG +
Sbjct: 424 VAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQ 483
Query: 199 ISWEPVH---LNA----PCRRFVSA-SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
++ E H +N+ P + ++ S+D A++W + +GH + CV++
Sbjct: 484 MT-ERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSP 542
Query: 251 -DGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
D ++ T S D T+K+W ++ +GH
Sbjct: 543 VDQILATSSADGTLKLWGLQDFSCLKTFEGH 573
Score = 120 (47.3 bits), Expect = 8.6e-19, Sum P(2) = 8.6e-19
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG-KHLVSGSKAGELQC 176
P+ ++ + S + + +D T + G+ + VL + + G H+V + + +L+
Sbjct: 312 PERNEIVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKV 371
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
++ T L GH + I + L FVS +KD R+W ++ V+C+
Sbjct: 372 FELSTSHCQ--ILYGHTETILALDVFRKGL-----MFVSCAKDKSIRVWRMNKDGRVVCV 424
Query: 237 S---GHTL---AVTCVKWGGDGVIYTGSQDCTIKVW 266
+ GH AV+C + + + T SQDCTIKVW
Sbjct: 425 AQGLGHAHGVGAVSCSRLK-ESFVVTSSQDCTIKVW 459
Score = 109 (43.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 34/139 (24%), Positives = 60/139 (43%)
Query: 98 NRCSATI-AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
NRC T A H V ++ F LA+G D+T+++WD+ Q G V +
Sbjct: 99 NRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLV 158
Query: 157 AWSADGKHL--VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ D L S S +++ WD + K L GH +T +++ A +
Sbjct: 159 EFHPDISRLQLFSSSMDYKIRIWDLNSSKCVA-VLDGHFSAVTSLAF-----TADGNTLI 212
Query: 215 SASKDGDARIWDVSLRKCV 233
S+ +D +W++ R+ +
Sbjct: 213 SSGRDKICMVWNLKTRESI 231
Score = 94 (38.1 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 41/183 (22%), Positives = 78/183 (42%)
Query: 114 VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADGKHLVSGSKAG 172
V S DG+ + G T + + D+ T + + + S D + LV+GS+A
Sbjct: 31 VQVSRDGKFMFCPCG-TKLNVIDVETGALLHSLEQDDQEDITSFVLSPDDEVLVTGSRAL 89
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
L+ W+ + + + H I ++ + ++ + D +IWD+ + C
Sbjct: 90 LLKQWNWRENRCVRTWKAVH---IAPVA--TMVFDSTSTLLATGGCDSTIKIWDMIKQYC 144
Query: 233 VICLSGHTLAVTCVKWGGDGV---IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
L G + V V++ D +++ S D I++W+ K + L GH V SLA
Sbjct: 145 THNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAF 204
Query: 290 STE 292
+ +
Sbjct: 205 TAD 207
Score = 85 (35.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWN-GTTGKFVAVFRGHVGPVYQISWSADSRL 416
GH + + + G S + DKSI++W G+ V V +G +G + + + SRL
Sbjct: 384 GHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQG-LGHAHGVGAVSCSRL 442
Query: 417 ----LLSGSKDSTLKVWDI 431
+++ S+D T+KVW+I
Sbjct: 443 KESFVVTSSQDCTIKVWNI 461
>UNIPROTKB|F1P1L6 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 GO:GO:0014909 EMBL:AADN02016792
IPI:IPI00586339 Ensembl:ENSGALT00000018663 ArrayExpress:F1P1L6
Uniprot:F1P1L6
Length = 408
Score = 254 (94.5 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 85/357 (23%), Positives = 161/357 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T + H+ +V V+ P LA +G D +W L+ +F+C+GHK+ V C +S D
Sbjct: 60 TFSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHD 119
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP-VHLNAPCRRFVSASKDG 220
+ +G +G ++ W T + + + G +W+ W P H+ ++ + DG
Sbjct: 120 SVFVATGDMSGLIKVWRVDTKEEAWSFEVGDLEWM---EWHPQAHV------LLAGTADG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKG 279
++ +W + C G TC K DG G +D T+++W+ QG + LKG
Sbjct: 171 NSWMWKIPSGDCKT-FQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGTSLHVLKG 229
Query: 280 H-GHW--VNSLALSTEYAL-RTGAFD-H-------TGKQ---YSSPEEMKKAALERYNKI 324
GH + +A + + +L TG+ D H TGK + KA +
Sbjct: 230 QDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSATGKVVCVFKMESAAPKAPASEGEEA 289
Query: 325 KGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ N+ E L G D T+ +++ +S Q H+ + + + + V
Sbjct: 290 ESNSVESLGFCNVMPLAAVGYLDGTLAIYD--LSTQSLRHKCQHESGIVQLLWEENSAVV 347
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ S D +++LW+ +GK ++ +RGH + + + D+ ++++ S D KV+ ++
Sbjct: 348 YTCSLDGAVRLWDARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAKVFCVQ 404
Score = 127 (49.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 36/139 (25%), Positives = 61/139 (43%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+G +D F+W + + +GH+ V FS D +VA+ IK+W T
Sbjct: 82 VTGGEDDKAFVWRLS-DGELLFECSGHKDSVTCAGFSHDSVFVATGDMSGLIKVWRVDTK 140
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
+ F VG + + W + +LL+G+ D +W I + K G A
Sbjct: 141 EEAWSFE--VGDLEWMEWHPQAHVLLAGTADGNSWMWKIPSGDCKT-FQGPACPATCGKI 197
Query: 453 SPDGEKVASGGKDRVLKLW 471
PDG++ G +D +++W
Sbjct: 198 LPDGKRAVVGYEDGTMRIW 216
>UNIPROTKB|F1ND84 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 OMA:VWSFEVG GO:GO:0014909
EMBL:AADN02016792 IPI:IPI00821947 Ensembl:ENSGALT00000038174
ArrayExpress:F1ND84 Uniprot:F1ND84
Length = 411
Score = 254 (94.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 85/357 (23%), Positives = 161/357 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T + H+ +V V+ P LA +G D +W L+ +F+C+GHK+ V C +S D
Sbjct: 63 TFSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHD 122
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP-VHLNAPCRRFVSASKDG 220
+ +G +G ++ W T + + + G +W+ W P H+ ++ + DG
Sbjct: 123 SVFVATGDMSGLIKVWRVDTKEEAWSFEVGDLEWM---EWHPQAHV------LLAGTADG 173
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKG 279
++ +W + C G TC K DG G +D T+++W+ QG + LKG
Sbjct: 174 NSWMWKIPSGDCKT-FQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGTSLHVLKG 232
Query: 280 H-GHW--VNSLALSTEYAL-RTGAFD-H-------TGKQ---YSSPEEMKKAALERYNKI 324
GH + +A + + +L TG+ D H TGK + KA +
Sbjct: 233 QDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSATGKVVCVFKMESAAPKAPASEGEEA 292
Query: 325 KGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ N+ E L G D T+ +++ +S Q H+ + + + + V
Sbjct: 293 ESNSVESLGFCNVMPLAAVGYLDGTLAIYD--LSTQSLRHKCQHESGIVQLLWEENSAVV 350
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
+ S D +++LW+ +GK ++ +RGH + + + D+ ++++ S D KV+ ++
Sbjct: 351 YTCSLDGAVRLWDARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAKVFCVQ 407
Score = 127 (49.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 36/139 (25%), Positives = 61/139 (43%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+G +D F+W + + +GH+ V FS D +VA+ IK+W T
Sbjct: 85 VTGGEDDKAFVWRLS-DGELLFECSGHKDSVTCAGFSHDSVFVATGDMSGLIKVWRVDTK 143
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
+ F VG + + W + +LL+G+ D +W I + K G A
Sbjct: 144 EEAWSFE--VGDLEWMEWHPQAHVLLAGTADGNSWMWKIPSGDCKT-FQGPACPATCGKI 200
Query: 453 SPDGEKVASGGKDRVLKLW 471
PDG++ G +D +++W
Sbjct: 201 LPDGKRAVVGYEDGTMRIW 219
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 260 (96.6 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 58/186 (31%), Positives = 93/186 (50%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V FSP G AS S D T R+W ++ P+ GH + V C+ W + ++
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI 517
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+GS ++ WD QTG+ GH+ + ++ P R S +DG +W
Sbjct: 518 ATGSSDKTVRLWDVQTGE-CVRIFIGHRSMVLSLAMSP-----DGRYMASGDEDGTIMMW 571
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG-KLIR--ELKGHG 281
D+S +C+ L GH V + + G+G ++ +GS DCT+K+W+ T KL + E G+
Sbjct: 572 DLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNS 631
Query: 282 HWVNSL 287
+ + SL
Sbjct: 632 NRLRSL 637
Score = 242 (90.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 79/246 (32%), Positives = 109/246 (44%)
Query: 94 IRPVNRCSATIA-GHTEAVLSVAFSPDGRQLASGSGDTTVRLWD--LNTQTPMFKCTGHK 150
I P R S T+ GH+ V S FSP G + S S DTT+RLW LN +K GH
Sbjct: 403 IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYK--GHN 460
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V +S G + S S + W +P ++GH + + W P N C
Sbjct: 461 YPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPL-RIMAGHLSDVDCVQWHP---N--C 514
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
+ S D R+WDV +CV GH V + DG + +G +D TI +W+ +
Sbjct: 515 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 574
Query: 270 QGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA 328
+ I L GH V SL+ S E +L +G+ D T K + K E N GN+
Sbjct: 575 TARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKN---GNS 631
Query: 329 PERLVS 334
RL S
Sbjct: 632 -NRLRS 636
Score = 229 (85.7 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 49/139 (35%), Positives = 80/139 (57%)
Query: 334 SGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
S S D T +W ++ + QP M GH V+ V + P+ ++A+ S DK+++LW+ TG
Sbjct: 477 SCSHDRTARIW--SMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTG 534
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
+ V +F GH V ++ S D R + SG +D T+ +WD+ T + L GH V+++ +
Sbjct: 535 ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSY 594
Query: 453 SPDGEKVASGGKDRVLKLW 471
S +G +ASG D +KLW
Sbjct: 595 SGEGSLLASGSADCTVKLW 613
Score = 207 (77.9 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 59/239 (24%), Positives = 108/239 (45%)
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQ 259
W+ + + A D + + R+ L GH+ V + G + + S
Sbjct: 379 WDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSA 438
Query: 260 DCTIKVWETTQGKLIRELKGHGH--WVNSLALSTEYALRTGAFDHTGKQYS----SPEEM 313
D TI++W T + KGH + W + Y + + D T + +S P +
Sbjct: 439 DTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHY-FASCSHDRTARIWSMDRIQPLRI 497
Query: 314 KKAALERYNKIKGNAP-ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
L + ++ + + +GS D T+ LW+ + + GH+ +V + SPDG
Sbjct: 498 MAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRI-FIGHRSMVLSLAMSPDG 556
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
+++AS D +I +W+ +T + + GH V+ +S+S + LL SGS D T+K+WD+
Sbjct: 557 RYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 202 (76.2 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 41/140 (29%), Positives = 73/140 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
++S S D T+ LW ++ GH V FSP G + AS S D++ ++W+
Sbjct: 433 VLSSSADTTIRLWSTKLNAN-LVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDR 491
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + + GH+ V + W + + +GS D T+++WD++T + + GH V ++
Sbjct: 492 IQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLA 551
Query: 452 WSPDGEKVASGGKDRVLKLW 471
SPDG +ASG +D + +W
Sbjct: 552 MSPDGRYMASGDEDGTIMMW 571
Score = 187 (70.9 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 45/136 (33%), Positives = 70/136 (51%)
Query: 93 RIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNW 152
RI+P+ +AGH V V + P+ +A+GS D TVRLWD+ T + GH++
Sbjct: 491 RIQPLR----IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSM 546
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
VL +A S DG+++ SG + G + WD T + PL GH + +S+ +
Sbjct: 547 VLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI-TPLMGHNSCVWSLSY-----SGEGSL 600
Query: 213 FVSASKDGDARIWDVS 228
S S D ++WDV+
Sbjct: 601 LASGSADCTVKLWDVT 616
Score = 186 (70.5 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 39/119 (32%), Positives = 62/119 (52%)
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD 413
T + GH V FSP G +V S+S D +I+LW+ + ++GH PV+ +S
Sbjct: 412 TLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPF 471
Query: 414 SRLLLSGSKDSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S S D T ++W + R Q L+ + GH +V V W P+ +A+G D+ ++LW
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRI-MAGHLSDVDCVQWHPNCNYIATGSSDKTVRLW 529
Score = 154 (59.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 53/218 (24%), Positives = 100/218 (45%)
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
G+ S L GH + ++ P P +S+S D R+W L ++C GH
Sbjct: 407 GRRSYTLLLGHSGPVYSATFSP-----PGDFVLSSSADTTIRLWSTKLNANLVCYKGHNY 461
Query: 242 AVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STEYALRTG 298
V ++ G + S D T ++W + + +R + GH V+ + + Y + TG
Sbjct: 462 PVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNY-IATG 520
Query: 299 AFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSKQPK 353
+ D T + + E + + + + A P+ + SG +D T+ +W+ + ++
Sbjct: 521 SSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI- 579
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
T + GH V + +S +G +AS S D ++KLW+ T+
Sbjct: 580 TPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
Score = 54 (24.1 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 115 AFSPDGRQLASGSGDTTVRLWDL 137
+ S DG +A G D+++++WD+
Sbjct: 359 SISHDGSLVAGGFSDSSIKVWDM 381
Score = 40 (19.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
N + C + S DG + G ++ WD
Sbjct: 353 NGLNCSSISHDGSLVAGGFSDSSIKVWD 380
>UNIPROTKB|O93277 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF020054 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 IPI:IPI00581678
RefSeq:NP_001004402.1 UniGene:Gga.2409 ProteinModelPortal:O93277
STRING:O93277 PRIDE:O93277 GeneID:422842 KEGG:gga:422842
NextBio:20825413 Uniprot:O93277
Length = 609
Score = 259 (96.2 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 105/400 (26%), Positives = 171/400 (42%)
Query: 90 AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG- 148
A F P + T++ HT V V FSPDG + A+ S D + ++D T + G
Sbjct: 173 AAFFEGPPFKFKFTLSDHTRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGG 232
Query: 149 --HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGK--PSGNPLSGHKKWITGISWEPV 204
H + I+WS D L+S S + WD + N S G W+
Sbjct: 233 KAHDGGIYAISWSPDSSQLLSASGDKTAKIWDVGANSVVSTFNMGSNVLDQQLGCLWQKD 292
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR-KCVICLSGHTLAVTCV---KWGGDGVIYTGSQD 260
HL +S S G D + K + + GH+ ++ C+ K GG IY+GS D
Sbjct: 293 HL-------LSLSLSGYINYLDKNNPDKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSND 345
Query: 261 CTIKVWETTQGKLIR-ELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
I W++ G+ KGH + V+ +A+ L T + D T + Y++ + K
Sbjct: 346 GHINYWDSDTGENDGFSGKGHTNQVSRMAVDEMDQLVTCSMDDTVR-YTN---LSKRDYS 401
Query: 320 RYNKIKGNA-PERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQL---VNHVYFSPDGQW 374
+ +K + P+ L G +T+ L V + K + L V P G
Sbjct: 402 GQDAVKMDVQPKCLAVGPGGYTVVLCIGQIVLMKDKKKCFAIDDLGYEPEAVAVHPGGGS 461
Query: 375 VASASFDKSIKLWN--GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
VA D +++L++ GT+ K GPV +++S D L + + V+ +
Sbjct: 462 VAVGGTDGNVRLYSIQGTSLKSDDKTLEAKGPVTDLAYSHDGAFLAVCDANKVVTVFSVP 521
Query: 433 TQKLKQDL-PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
++ ++ GH +V + WSPD E ASGG D ++ +W
Sbjct: 522 DGYVEHNVFYGHHAKVVCIAWSPDNEHFASGGMDMMVYVW 561
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 69/210 (32%), Positives = 100/210 (47%)
Query: 239 HTLAVTCVKWGGDGVIYTGSQDCT--IKVWETTQGK-LIR-ELKGHGHWVNSLALSTEYA 294
H V K+ G Y S D + +++W+TTQ + L++ E + + LA TE +
Sbjct: 59 HAHQVVVAKYAPSG-FYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDLAW-TEDS 116
Query: 295 LRTGAFDHTGKQYSS----PEEMKKAALERYNK------IKGNAPERLVSGSDDFTMFLW 344
R +++ + + +NK IK P RL +GSDD +
Sbjct: 117 KRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQTRPYRLATGSDDNCAAFF 176
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG---H 401
E K K ++ H + VN V FSPDG A+AS D I +++G TG+ V G H
Sbjct: 177 EGPPFKF-KFTLSDHTRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGGKAH 235
Query: 402 VGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
G +Y ISWS DS LLS S D T K+WD+
Sbjct: 236 DGGIYAISWSPDSSQLLSASGDKTAKIWDV 265
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 37/142 (26%), Positives = 63/142 (44%)
Query: 335 GSDDF-TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW-VASASFDKSIKLWNGTTG 392
G + F +FLW+ S +TGH +++N V + +A+ S D + G
Sbjct: 125 GREKFGAVFLWDSGSSVG---EITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGPPF 181
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG---HADEVFA 449
KF H V + +S D + S D + ++D +T + L G H ++A
Sbjct: 182 KFKFTLSDHTRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGGKAHDGGIYA 241
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
+ WSPD ++ S D+ K+W
Sbjct: 242 ISWSPDSSQLLSASGDKTAKIW 263
Score = 135 (52.6 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 50/194 (25%), Positives = 81/194 (41%)
Query: 104 IAGHTEAVLSVAFSPDGR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I GH + + SV +LA+GS D ++ F + H +V C+ +S DG
Sbjct: 144 ITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGPPFKFKFTLSDHTRFVNCVRFSPDG 203
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSG---HKKWITGISWEPVHLNAPCRRFVSASKD 219
+ S G++ +D +TG+ L G H I ISW P + +SAS D
Sbjct: 204 NRFATASADGQIFIYDGKTGEKVC-ALGGGKAHDGGIYAISWSP-----DSSQLLSASGD 257
Query: 220 GDARIWDVSLRKCVICLS-GHTLA---VTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
A+IWDV V + G + + C+ W D ++ + + K +R
Sbjct: 258 KTAKIWDVGANSVVSTFNMGSNVLDQQLGCL-WQKDHLLSLSLSGYINYLDKNNPDKPLR 316
Query: 276 ELKGHGHWVNSLAL 289
+KGH + L +
Sbjct: 317 VIKGHSKSIQCLTV 330
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 48/204 (23%), Positives = 89/204 (43%)
Query: 213 FVSASKD--GDARIWDVSLRKCVICLSGHTLA--VTCVKWGGDG----VIYTGSQDC-TI 263
F AS D G RIWD + ++ ++ A + + W D V+ G + +
Sbjct: 73 FYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDLAWTEDSKRIAVVGEGREKFGAV 132
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERY 321
+W++ G + E+ GH +NS+ + + Y L TG+ D+ + P K L +
Sbjct: 133 FLWDS--GSSVGEITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGPPFKFKFTLSDH 190
Query: 322 NKIKGN---APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTG--HQQLVNHVYFSPDGQW 374
+ +P+ R + S D +F+++ ++ G H + + +SPD
Sbjct: 191 TRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGGKAHDGGIYAISWSPDSSQ 250
Query: 375 VASASFDKSIKLWNGTTGKFVAVF 398
+ SAS DK+ K+W+ V+ F
Sbjct: 251 LLSASGDKTAKIWDVGANSVVSTF 274
Score = 97 (39.2 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA--VFRGHVGPVYQISWSADSRLLLSG 420
V + +S DG ++A +K + +++ G +V VF GH V I+WS D+ SG
Sbjct: 494 VTDLAYSHDGAFLAVCDANKVVTVFSVPDG-YVEHNVFYGHHAKVVCIAWSPDNEHFASG 552
Query: 421 SKDSTLKVWDIRTQKLKQDLP-GHA-DEVFAVDWSPDGEKVASGGKDRVLKLW 471
D + VW + + + +P H V + W D + + D +K W
Sbjct: 553 GMDMMVYVWTVSDPETRIKIPDAHRLHHVSGLAWL-DEHTLVTTSHDASVKEW 604
Score = 75 (31.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF-VAVFRGH-VGPVYQISWSADSR 415
GH V + +SPD + AS D + +W + + + + H + V ++W D
Sbjct: 532 GHHAKVVCIAWSPDNEHFASGGMDMMVYVWTVSDPETRIKIPDAHRLHHVSGLAW-LDEH 590
Query: 416 LLLSGSKDSTLKVWDI 431
L++ S D+++K W I
Sbjct: 591 TLVTTSHDASVKEWSI 606
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 254 (94.5 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 89/334 (26%), Positives = 154/334 (46%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISAIEGTEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPIVTLSGHKE 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AISSVLWSDAEEICSASWDHTIKVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQK 435
D+ I+LW+ T G V++ H G V + WS + L+SGS D+ +K+WD R+ K
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWDTRSCK 376
Query: 436 LK-QDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
DL H D+V +VDW+ G + SGG D L
Sbjct: 377 APLYDLAAHEDKVLSVDWTDSG-LLLSGGADNKL 409
Score = 237 (88.5 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 85/320 (26%), Positives = 151/320 (47%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + EL+ + T P H WI+ I + ++ S D +RIW
Sbjct: 75 ISSEEVVELEYVEKYTA-PQPEQCMFHDDWISAIEGTEEWI-------LTGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + + S D TI +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCC 185
Query: 278 KGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
+GH V+S+A+ ST +G++D K +S+ ++ +E N P +
Sbjct: 186 RGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWSTVPTDEEDEMEEST----NRPRKKQKTE 241
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
+ +++ P ++GH++ ++ V +S D + + SAS+D +IK+W+ +G +
Sbjct: 242 --------QLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVESGSLKS 292
Query: 397 VFRGHVGPVYQ-ISWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDW 452
G+ V+ IS+S + L SGS D +++WD RT+ + L H V +V W
Sbjct: 293 TLTGN--KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 453 SPDGEK-VASGGKDRVLKLW 471
SP E+ + SG D ++KLW
Sbjct: 351 SPTHEQQLISGSLDNMVKLW 370
Score = 230 (86.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 52/161 (32%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EA+ SV +S D ++ S S D T+++WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGAD 406
Score = 175 (66.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 54/176 (30%), Positives = 87/176 (49%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GHK + + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGADN--KLYS 411
Score = 137 (53.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 254 (94.5 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 89/334 (26%), Positives = 154/334 (46%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISAIEGAEEW--ILTGSYDKTSRIWSSE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTRFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPIVTLSGHKE 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AISSVLWSDAEEICSASWDHTIGVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQK 435
D+ I+LW+ T G V++ H G V + WS + L+SGS D+ +K+WD R+ K
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCK 376
Query: 436 LK-QDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
DL H D+V +VDW+ G + SGG D L
Sbjct: 377 APLYDLAAHEDKVLSVDWTNTG-LLLSGGADNKL 409
Score = 232 (86.7 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 85/320 (26%), Positives = 150/320 (46%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + EL+ + T P H WI+ I + ++ S D +RIW
Sbjct: 75 ISSEEVVELEYVEKYTA-PQPEQCMFHDDWISAIEGAEEWI-------LTGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
S K ++ + GHT V V W D + + + S D TI +WE + ++ L
Sbjct: 127 S-SEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCC 185
Query: 278 KGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
+GH V+S+A+ ST +G++D K +S+ ++ +E N P +
Sbjct: 186 RGHAGSVDSIAVDSTGTRFCSGSWDKMLKIWSTVPTDEEDEMEEST----NRPRKKQKTE 241
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
+ +++ P ++GH++ ++ V +S D + + SAS+D +I +W+ +G +
Sbjct: 242 --------QLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIGVWDVESGSLKS 292
Query: 397 VFRGHVGPVYQ-ISWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDW 452
G+ V+ IS+S + L SGS D +++WD RT+ + L H V +V W
Sbjct: 293 TLTGN--KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 453 SPDGEK-VASGGKDRVLKLW 471
SP E+ + SG D ++KLW
Sbjct: 351 SPTHEQQLISGSLDNIVKLW 370
Score = 226 (84.6 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 52/161 (32%), Positives = 84/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EA+ SV +S D ++ S S D T+ +WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHKEAISSVLWS-DAEEICSASWDHTIGVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTNTGLLLSGGAD 406
Score = 172 (65.6 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 54/176 (30%), Positives = 86/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GHK + + WS D + + S S + WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIGVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTNTGLLLSGGADN--KLYS 411
Score = 136 (52.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 256 (95.2 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 81/298 (27%), Positives = 135/298 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I GH V SVAF P +GS D T+++WD+ T TGH V +A S
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
++ S +++CWD + K + GH + ++ P L+ ++ +D R
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRS-YHGHLSGVYCLALHPT-LDV----LLTGGRDSVCR 285
Query: 224 IWDVSLRKCVICLSGHTLAVTCV-KWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ + + LSGH V V D + TGS D TIK W+ GK + L H
Sbjct: 286 VWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345
Query: 283 WVNSLALST-EYALRTGAFDHTGKQYSSPE-EMKKAALERY----NKIKGNAPERLVSGS 336
V ++ L E A + + D+T K++S P+ E L + N + N +V+G
Sbjct: 346 SVRAMTLHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGG 404
Query: 337 DDFTMFLWEPAVS---KQPKTRMT-GHQQLVNHVY---FSPDGQWVASASFDKSIKLW 387
D+ +++ W+ +Q +T + G + +Y + G + + DK+IK+W
Sbjct: 405 DNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 198 (74.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 46/142 (32%), Positives = 72/142 (50%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E +GS D T+ +W+ A K +TGH + V + S ++ SA DK +K W+
Sbjct: 189 EWFCTGSADRTIKIWDVATGVL-KLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDL 247
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
K + + GH+ VY ++ +LL+G +DS +VWDIRT+ L GH + V +
Sbjct: 248 EQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCS 307
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
V P +V +G D +K W
Sbjct: 308 VFTRPTDPQVVTGSHDTTIKFW 329
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 61/236 (25%), Positives = 103/236 (43%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N+ + GH V +A P L +G D+ R+WD+ T+ +F +GH N V +
Sbjct: 250 NKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVF 309
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+V+GS ++ WD + GK L+ HKK + ++ P NA F SAS
Sbjct: 310 TRPTDPQVVTGSHDTTIKFWDLRYGKTMST-LTHHKKSVRAMTLHPKE-NA----FASAS 363
Query: 218 KDGDARIWDVSLRKCVIC---LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
D + SL K C LS + + DGV+ TG + +I W+ G
Sbjct: 364 ADNTKKF---SLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSF 420
Query: 275 RELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPE 330
++ + V +L +E + +D+TG + + E K ++ + + + PE
Sbjct: 421 QQSETI---VQPGSLESEAGIYAACYDNTGSRLVTCEADK--TIKMWKEDENATPE 471
Score = 173 (66.0 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLL 417
GH V V F P +W + S D++IK+W+ TG GH+ V ++ S +
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM 233
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S D +K WD+ K+ + GH V+ + P + + +GG+D V ++W
Sbjct: 234 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVW 287
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 72/300 (24%), Positives = 115/300 (38%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH WV +A+ + +GS ++ WD TG L+GH + + G++ H
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLT-LTGHIEQVRGLAVSNRHTY 232
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVW 266
SA D + WD+ K + GH V C+ V+ TG +D +VW
Sbjct: 233 -----MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVW 287
Query: 267 ETTQGKLIRELKGHGHWVNSL-ALSTEYALRTGAFDHT--------GKQYSSPEEMKKAA 317
+ I L GH + V S+ T+ + TG+ D T GK S+ KK+
Sbjct: 288 DIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSV 347
Query: 318 LERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVAS 377
K NA S S D T P + ++ + ++N + + DG V
Sbjct: 348 RAMTLHPKENA---FASASADNTKKFSLPK-GEFCHNMLSQQKTIINAMAVNEDGVMVTG 403
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGP--------VYQISWSADSRLLLSGSKDSTLKVW 429
+ SI W+ +G V P +Y + L++ D T+K+W
Sbjct: 404 GD-NGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 63/267 (23%), Positives = 110/267 (41%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH E V +A S + S D V+ WDL + GH + V C+A
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTL 272
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L++G + + WD +T K LSGH + + P P + V+ S D
Sbjct: 273 DVLLTGGRDSVCRVWDIRT-KMQIFALSGHDNTVCSVFTRPTD---P--QVVTGSHDTTI 326
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+ WD+ K + L+ H +V + + + S D T K + +G+ +
Sbjct: 327 KFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQ 385
Query: 282 HWV-NSLALSTEYALRTGA-------FD-HTGKQYSSPEEM-KKAALER----YNKIKGN 327
+ N++A++ + + TG +D +G + E + + +LE Y N
Sbjct: 386 KTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDN 445
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKT 354
RLV+ D T+ +W+ + P+T
Sbjct: 446 TGSRLVTCEADKTIKMWKEDENATPET 472
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 52/205 (25%), Positives = 84/205 (40%)
Query: 272 KLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKG-- 326
K R ++GH WV S+A S E+ TG+ D T K + + K L + +++G
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFC-TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLA 225
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
N + S DD + W+ +K ++ GH V + P + + D
Sbjct: 226 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRS-YHGHLSGVYCLALHPTLDVLLTGGRDSVC 284
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
++W+ T + GH V + +++GS D+T+K WD+R K L H
Sbjct: 285 RVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHK 344
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLK 469
V A+ P AS D K
Sbjct: 345 KSVRAMTLHPKENAFASASADNTKK 369
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDG 456
V +GH+G V +++ + +GS D T+K+WD+ T LK L GH ++V + S
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 457 EKVASGGKDRVLKLW 471
+ S G D+ +K W
Sbjct: 231 TYMFSAGDDKQVKCW 245
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 259 (96.2 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 66/205 (32%), Positives = 102/205 (49%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W +N + TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 281 GHWVNSLAL--STEYALRTGAFDHT 303
VN + S EY L +G+ T
Sbjct: 189 YGPVNVVEFHPSIEYLLASGSSSMT 213
Score = 225 (84.3 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 68/222 (30%), Positives = 101/222 (45%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + VW + + L GH + SL +S + L A +G E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P + SGS D + LW+ K + H Q V
Sbjct: 94 AAKI-LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR-RKGCIFKYKSHTQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLL-SGSKD 423
+ FSPDG+W+ASA+ D ++KLW+ T GK + F GH GPV + + LL SGS
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSS 211
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
T++ WD+ + + A V + ++PDG + G +D
Sbjct: 212 MTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD 253
Score = 201 (75.8 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 58/204 (28%), Positives = 93/204 (45%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSG 128
+E ++S ++ L + R+ + T+ GH + S+ F P G +ASGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD GK
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 189 LSGHKKWITGISWEPV--HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
+GH + + + P +L A S S R WD+ V C+ V C+
Sbjct: 185 FTGHYGPVNVVEFHPSIEYLLA------SGSSSMTIRFWDLEKFHVVSCIEEEATPVRCI 238
Query: 247 KWGGDGV-IYTGSQDCTIKV--WE 267
+ DG +Y G QD +++V WE
Sbjct: 239 LFNPDGCCLYGGFQD-SLRVYGWE 261
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 59/206 (28%), Positives = 100/206 (48%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYN----KIKGN 327
++E+ H V+SL L ST L TG D +S + +L + ++ +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
A E L V+GS ++ +W+ +K +T + GH+ + + F P G +VAS S D IKL
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRT-LLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ + ++ H V + +S D + L S + D T+K+WD+ K+ + GH
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 191
Query: 447 VFAVDWSPDGEKV-ASGGKDRVLKLW 471
V V++ P E + ASG ++ W
Sbjct: 192 VNVVEFHPSIEYLLASGSSSMTIRFW 217
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 62/230 (26%), Positives = 105/230 (45%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W V+ CV+ L+GHT + ++ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN------ 322
K++R L GH + SL + + +G+ D K + + +K + +Y
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW---DVRRKGCIFKYKSHTQAV 150
Query: 323 KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV-ASAS 379
+ +P+ L S +DD T+ LW+ K TGH VN V F P +++ AS S
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKV-MFEFTGHYGPVNVVEFHPSIEYLLASGS 209
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
+I+ W+ V+ PV I ++ D L G +DS L+V+
Sbjct: 210 SSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDS-LRVY 258
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 48/233 (20%), Positives = 100/233 (42%)
Query: 97 VNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
VN+ C ++ GHT + S+ S + +GS ++R+WDL + GHK +
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ + G + SGS +++ WD + K H + + + + P +
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLA 163
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGK 272
SA+ D ++WD++ K + +GH V V++ + ++ +GS TI+ W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFH 223
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
++ ++ V + + + G F + + Y PE + + K+
Sbjct: 224 VVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 276
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 250 (93.1 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 52/138 (37%), Positives = 79/138 (57%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
+ S D T LW P TGH N V F P+ ++A+ S DKS +LW TGK
Sbjct: 738 TASHDRTARLWTTN-HISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGK 796
Query: 394 FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 453
V +F GH P+Y +++S D RLL + +D+++ +WD+ T K + + GH V+++D+S
Sbjct: 797 CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFS 856
Query: 454 PDGEKVASGGKDRVLKLW 471
DG +ASG D ++LW
Sbjct: 857 CDGSILASGSSDCTVRLW 874
Score = 237 (88.5 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 74/281 (26%), Positives = 125/281 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH+ V +FSPD + L S S DTT RLW + T + + GH V +++S G
Sbjct: 674 TFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFG 733
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + S + W P +GH + + P ++N + S D A
Sbjct: 734 FYFATASHDRTARLWTTNHISPL-RIFTGHLSDCNTVRFHP-NINY----LATGSNDKSA 787
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+W++ KCV GH + V + DG ++ T +D ++ +W+ + GK ++++ GH
Sbjct: 788 RLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHT 847
Query: 282 HWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFT 340
V SL S + + L +G+ D T + + ++KKA +N P L++
Sbjct: 848 KCVYSLDFSCDGSILASGSSDCTVRLW----DVKKA----FNSSLSTQPSSLINDESRKR 899
Query: 341 MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
L S + Q V +V FS +AS +F+
Sbjct: 900 KTLKSKLFSDELLETYPTKQTPVYNVCFSRRNLLLASGAFN 940
Score = 223 (83.6 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 63/203 (31%), Positives = 102/203 (50%)
Query: 238 GHTLAVTCVKWGGDG-VIYTGSQDCTIKVWET-TQGKLIRELKGHGHWVNSLALST-EYA 294
GH+ V + D + + S+D T ++W T L+ KGH V ++ S +
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVC-YKGHNFPVWDVSFSPFGFY 735
Query: 295 LRTGAFDHTGKQYS----SPEEMKKAALERYNKIKGNAP-ERLVSGSDDFTMFLWEPAVS 349
T + D T + ++ SP + L N ++ + L +GS+D + LWE
Sbjct: 736 FATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTG 795
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
K + M GH+ + V FSPDG+ +A+A D S+ LW+ +TGK V GH VY +
Sbjct: 796 KCVRIFM-GHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLD 854
Query: 410 WSADSRLLLSGSKDSTLKVWDIR 432
+S D +L SGS D T+++WD++
Sbjct: 855 FSCDGSILASGSSDCTVRLWDVK 877
Score = 195 (73.7 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 53/192 (27%), Positives = 91/192 (47%)
Query: 285 NSLALSTEYALRTGAFDHTGKQYSSPEEMK-KAALERYNKIKGNA--PER--LVSGSDDF 339
N+ + + L +G+ + K +E + K L + G + P+ L+S S+D
Sbjct: 642 NNKSTTANNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDT 701
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR 399
T LW GH V V FSP G + A+AS D++ +LW + +F
Sbjct: 702 TARLWSMETMSN-LVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFT 760
Query: 400 GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 459
GH+ + + + L +GS D + ++W+I+T K + GH ++ V +SPDG +
Sbjct: 761 GHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLL 820
Query: 460 ASGGKDRVLKLW 471
A+ G+D + LW
Sbjct: 821 ATAGEDTSVILW 832
Score = 167 (63.8 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 53/218 (24%), Positives = 90/218 (41%)
Query: 257 GSQDCTIKVW---ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM 313
G D ++K+W E + +L ++ + + G F + SS M
Sbjct: 576 GFSDSSVKIWNLKEMKEQRLQQQQQQQQQQQQQQNSNQNGYFENGNFASSASSASSA--M 633
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ 373
+ N A L SGS + L + + KT + GH V FSPD Q
Sbjct: 634 NGSGNNNENNKSTTANNNLNSGSSSSSNKLQKQQKESEFKTFL-GHSGPVYGCSFSPDSQ 692
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT 433
++ S S D + +LW+ T + ++GH PV+ +S+S + S D T ++W
Sbjct: 693 YLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNH 752
Query: 434 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ GH + V + P+ +A+G D+ +LW
Sbjct: 753 ISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLW 790
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C GH + +VAFSPDGR LA+ DT+V LWDL+T + K GH V + +
Sbjct: 796 KCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDF 855
Query: 159 SADGKHLVSGSKAGELQCWD 178
S DG L SGS ++ WD
Sbjct: 856 SCDGSILASGSSDCTVRLWD 875
Score = 151 (58.2 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 48/188 (25%), Positives = 82/188 (43%)
Query: 284 VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL 343
+N+ +S + L G F + + + +EMK+ L++ + + ++ S + +
Sbjct: 561 LNTTDISKDAQLVAGGFSDSSVKIWNLKEMKEQRLQQQQQQQQQQQQQQNSNQNGYFENG 620
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
+ + + M G + + + S S S KL F GH G
Sbjct: 621 NFASSASSASSAMNGSGNNNENNKSTTANNNLNSGSSSSSNKLQKQQKESEFKTFLGHSG 680
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
PVY S+S DS+ LLS S+D+T ++W + T GH V+ V +SP G A+
Sbjct: 681 PVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATAS 740
Query: 464 KDRVLKLW 471
DR +LW
Sbjct: 741 HDRTARLW 748
Score = 146 (56.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 76/318 (23%), Positives = 135/318 (42%)
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
L SGS ++ +L ++ GH V ++S D ++L+S S+ + W +T
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMET- 710
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA 242
+ GH + +S+ P F +AS D AR+W + + +GH
Sbjct: 711 MSNLVCYKGHNFPVWDVSFSPFGFY-----FATASHDRTARLWTTNHISPLRIFTGHLSD 765
Query: 243 VTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD 301
V++ + + TGS D + ++WE GK +R GH + ++A S + L A +
Sbjct: 766 CNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGE 825
Query: 302 HTGK---QYSSPEEMKKAALERYNKIKGNAP-----ERLVSGSDDFTMFLWEPAVSKQPK 353
T S+ +++KK ++ + K + L SGS D T+ LW+ V K
Sbjct: 826 DTSVILWDLSTGKKVKK--MDGHTKCVYSLDFSCDGSILASGSSDCTVRLWD--VKKAFN 881
Query: 354 TRM-TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
+ + T L+N S + + S F + + + PVY + +S
Sbjct: 882 SSLSTQPSSLINDE--SRKRKTLKSKLFSDEL----------LETYPTKQTPVYNVCFSR 929
Query: 413 DSRLLLSGSKDSTLKVWD 430
+ LL SG+ + TL +D
Sbjct: 930 RNLLLASGAFN-TLTAFD 946
Score = 58 (25.5 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 29/125 (23%), Positives = 55/125 (44%)
Query: 15 LTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAF--YISDHELLVPLGSYLE 72
LTDP PL P+ P P S + KL ++K +S E VP+ + E
Sbjct: 469 LTDPNA-PL-PPVVAPPPP-PPPTSGYIPKLKKKDKKKKEVKDERMSKIESNVPIPNLTE 525
Query: 73 KHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTV 132
+ + +++ + ++ + C TI + + + S D + +A G D++V
Sbjct: 526 RFE---NELMEDFTKCVSLSSSHLPSICFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSV 582
Query: 133 RLWDL 137
++W+L
Sbjct: 583 KIWNL 587
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 236 (88.1 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 51/150 (34%), Positives = 84/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P L+S S D T+ +W + PK + GH +V+ S DG + SAS+DK++
Sbjct: 28 PNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISSDGAYALSASWDKTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW TG F GH V +S+SAD+R ++SGS+D ++K+W+ + K GH
Sbjct: 88 RLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNPQNPVIVSSGWDKLVKVW 177
Score = 218 (81.8 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 55/189 (29%), Positives = 92/189 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ V S DG S S D T+RLW+L T T + GH N VL +++SAD
Sbjct: 58 SLKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADN 117
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSGS+ ++ W+ GH +W++ + + P N P VS+ D
Sbjct: 118 RQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQN-PV--IVSSGWDKLV 174
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W++S K GHT + V DG + +G +D T +W+ + K + L +
Sbjct: 175 KVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAND 234
Query: 282 HWVNSLALS 290
+++L S
Sbjct: 235 E-IHALVFS 242
Score = 217 (81.4 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 69/236 (29%), Positives = 116/236 (49%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVW-----ETTQGKLIRELKGHGHWVNSLA 288
L GH VT + + ++ + S+D T+ +W ET+ G R LKGH H V+
Sbjct: 11 LEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCV 70
Query: 289 LSTE--YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG---NAPER-LVSGSDDFTM 341
+S++ YAL + ++D T + + + + + N + +A R +VSGS D ++
Sbjct: 71 ISSDGAYAL-SASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSI 129
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFR 399
LW + GH + V+ V FSP+ Q + S+ +DK +K+W ++ K
Sbjct: 130 KLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHI 189
Query: 400 GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
GH G + ++ S D L SG KD T +WD+ K L + DE+ A+ +SP+
Sbjct: 190 GHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAN-DEIHALVFSPN 244
Score = 189 (71.6 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 63/213 (29%), Positives = 104/213 (48%)
Query: 103 TIAGHTEAVLSVAFSPDG-RQLASGSGDTTVRLWDLNT-QT----PMFKCTGHKNWVLCI 156
T+ GH V S+A S + L S S D T+ +W+L +T P GH + V
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+DG + +S S L+ W+ TG + GH + +S+ +A R+ VS
Sbjct: 70 VISSDGAYALSASWDKTLRLWELATGTTTRR-FVGHTNDVLSVSF-----SADNRQIVSG 123
Query: 217 SKDGDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDG---VIYTGSQDCTIKVWETTQG 271
S+D ++W+ +L C I GH+ V+CV++ + VI + D +KVWE +
Sbjct: 124 SRDRSIKLWN-TLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSC 182
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHT 303
KL + GH ++N++ +S + +L +G D T
Sbjct: 183 KLQTDHIGHTGYINTVTISPDGSLCASGGKDGT 215
Score = 184 (69.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 79/311 (25%), Positives = 138/311 (44%)
Query: 148 GHKNWVLCIAWSADGKH-LVSGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV +A S + + L+S S+ L W+ + S G P L GH ++
Sbjct: 13 GHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ +SAS D R+W+++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDR 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEY---ALRTGAFDHTGK--QYSSPE-EMK 314
+IK+W T K KGH WV+ + S + + +D K + SS + +
Sbjct: 128 SIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTD 187
Query: 315 KAALERYNKIKGNAPERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
Y +P+ + SG D T LW+ SK + + + + ++ + FSP+
Sbjct: 188 HIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYS-LNANDE-IHALVFSPNR 245
Query: 373 QWVASAS------FD--KSIKLWNGTTGKFVAVFRGHVGP-VYQISWSADSRLLLSGSKD 423
W+ +A+ FD K K+ + +F AV + P ++WSAD + L +G D
Sbjct: 246 YWLCAATASSIIIFDLEKKSKV-DELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTD 304
Query: 424 STLKVWDIRTQ 434
+ ++ W + ++
Sbjct: 305 NIIRAWGVMSR 315
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 60/255 (23%), Positives = 116/255 (45%)
Query: 236 LSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ CV + S D T+++WE G R GH + V S++ S +
Sbjct: 59 LKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNR 118
Query: 295 -LRTGAFDHTGKQYSSPEEMKKAALERYNK-----IKGNA-PER--LVSGSDDFTMFLWE 345
+ +G+ D + K +++ + K E+ + ++ + P+ +VS D + +WE
Sbjct: 119 QIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWE 178
Query: 346 PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
+ K +T GH +N V SPDG AS D + LW+ K + + +
Sbjct: 179 LSSCKL-QTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAN-DEI 236
Query: 406 YQISWSADSRLLLSGSKDSTLKVWDI----RTQKLKQDLPG-----HADEVFAVDWSPDG 456
+ + +S + R L + S++ ++D+ + +LK + E ++ WS DG
Sbjct: 237 HALVFSPN-RYWLCAATASSIIIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADG 295
Query: 457 EKVASGGKDRVLKLW 471
+ + +G D +++ W
Sbjct: 296 QTLFAGYTDNIIRAW 310
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 260 (96.6 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 72/242 (29%), Positives = 117/242 (48%)
Query: 239 HTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYAL 295
H+ AV C+K G V+ TG +D + +W + I L GH ++S+ ++E +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 296 RTGAFDHTGKQYSSPEEMKKAAL--ERYNKIKGNA-P--ERLVSGSDDFTMFLWEPAVSK 350
GA T K + E L R N + N P E SGS D + +W+ + K
Sbjct: 75 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWD--IRK 132
Query: 351 QPKTRM-TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
+ GH + VN + F+PDG+W+ S D +K+W+ T GK + F+ H G + +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD 192
Query: 410 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 469
+ LL +GS D T+K WD+ T +L V + ++PDG+ V G ++ LK
Sbjct: 193 FHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQES-LK 251
Query: 470 LW 471
++
Sbjct: 252 IF 253
Score = 237 (88.5 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 58/202 (28%), Positives = 95/202 (47%)
Query: 107 HTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H+ AV + R L +G D V LW + + GH + + + + A +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+G+ +G ++ WD + K L+GH+ +++ P F S S D + +IW
Sbjct: 75 AAGAASGTIKLWDLEEAKVV-RTLTGHRSNCVSVNFHPFG-----EFFASGSLDTNLKIW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+ + C+ GHT V +++ DG I +G +D +KVW+ T GKL+ E K H +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKI 188
Query: 285 NSLALST-EYALRTGAFDHTGK 305
SL E+ L TG+ D T K
Sbjct: 189 QSLDFHPHEFLLATGSADKTVK 210
Score = 228 (85.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 60/213 (28%), Positives = 106/213 (49%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHTGKQYSSPEEMKKAALERYNKIK 325
T + ++E H VN L + + + L TG DH ++ + A L Y
Sbjct: 3 TKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP--NAILSLYGHSS 60
Query: 326 G------NAPERLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
G +A E LV+ G+ T+ LW+ +K +T +TGH+ V F P G++ AS
Sbjct: 61 GIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRT-LTGHRSNCVSVNFHPFGEFFASG 119
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
S D ++K+W+ + ++GH V + ++ D R ++SG +D+ +KVWD+ KL
Sbjct: 120 SLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLH 179
Query: 439 DLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ H ++ ++D+ P +A+G D+ +K W
Sbjct: 180 EFKSHEGKIQSLDFHPHEFLLATGSADKTVKFW 212
Score = 207 (77.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 52/172 (30%), Positives = 82/172 (47%)
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT--GH 359
+T + Y E + +A KI + LV+G +D + LW A+ K P ++ GH
Sbjct: 2 NTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLW--AIGK-PNAILSLYGH 58
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
++ V F VA+ + +IKLW+ K V GH +++ S
Sbjct: 59 SSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFAS 118
Query: 420 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
GS D+ LK+WDIR + GH V + ++PDG + SGG+D V+K+W
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 170
Score = 170 (64.9 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 45/168 (26%), Positives = 77/168 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH +SV F P G ASGS DT +++WD+ + + GH V + ++ DG
Sbjct: 96 TLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSG + ++ WD GK + H+ I + + P + S D
Sbjct: 156 RWIVSGGEDNVVKVWDLTAGKLL-HEFKSHEGKIQSLDFHPHEF-----LLATGSADKTV 209
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
+ WD+ + + T V C+ + DG + G Q+ ++K+ WE
Sbjct: 210 KFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFSWE 256
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ + SV F +A+G+ T++LWDL + TGH++ + + + G
Sbjct: 54 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 113
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ SGS L+ WD + K + GH + + + + P R VS +D
Sbjct: 114 EFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTP-----DGRWIVSGGEDNVV 167
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLI 274
++WD++ K + H + + + + ++ TGS D T+K W+ +LI
Sbjct: 168 KVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELI 220
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 246 (91.7 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 50/139 (35%), Positives = 77/139 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
VSG D LW QP GH VN F P+ +VA+ S D++++LW+ G
Sbjct: 599 VSGGHDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 657
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
V +F GH GP++ +++S + R L +G+ D + +WDI + +L GH D V ++ +
Sbjct: 658 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF 717
Query: 453 SPDGEKVASGGKDRVLKLW 471
S DGE +ASG D ++LW
Sbjct: 718 SRDGEILASGSMDNTVRLW 736
Score = 223 (83.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ V +FSPD L S S D TVRLW L T T + GH V +S G +
Sbjct: 539 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 598
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSG + W +P +GH + ++ H N+ + S D R+W
Sbjct: 599 VSGGHDRVARLWATDHYQPL-RIFAGH---LADVNCTRFHPNS--NYVATGSADRTVRLW 652
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
DV CV +GH + + + +G + TG+ D + +W+ G ++ ELKGH V
Sbjct: 653 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV 712
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG--NAPE 330
SL S + L +G+ D+T + + + + + + + G N PE
Sbjct: 713 CSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPE 761
Score = 191 (72.3 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 58/221 (26%), Positives = 102/221 (46%)
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIR 275
S D RI D + L GH+ V + D + + S+D T+++W +
Sbjct: 518 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 577
Query: 276 ELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPE 330
KGH + V S Y +G D + +++ P + L N + +
Sbjct: 578 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 637
Query: 331 RLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
V+ GS D T+ LW+ ++ TGH+ ++ + FSP+G+++A+ + D + LW+
Sbjct: 638 NYVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 696
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
G V +GH V + +S D +L SGS D+T+++WD
Sbjct: 697 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/169 (28%), Positives = 75/169 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH V FSP G SG D RLW + P+ GH V C +
Sbjct: 575 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 634
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ ++ +GS ++ WD G +GHK I +++ P N R + + D
Sbjct: 635 PNSNYVATGSADRTVRLWDVLNGN-CVRIFTGHKGPIHSLTFSP---NG--RFLATGATD 688
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
G +WD+ V L GHT V +++ DG ++ +GS D T+++W+
Sbjct: 689 GRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 177 (67.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+I G D T++VW T KL R +K + L+L + + + + ++ E
Sbjct: 482 LIAGGFADSTVRVWSVTPKKL-RSVKQ----ASDLSLIDKES--DDVLERIMDEKTASE- 533
Query: 313 MKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTG---HQQLVNH 365
K + G + P+R L+S S+D T+ LW S Q T + G H V
Sbjct: 534 -LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW----SLQTFTCLVGYKGHNYPVWD 588
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDST 425
FSP G + S D+ +LW + + +F GH+ V + +S + +GS D T
Sbjct: 589 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 648
Query: 426 LKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD-RVLKLW 471
+++WD+ + GH + ++ +SP+G +A+G D RVL LW
Sbjct: 649 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL-LW 694
Score = 164 (62.8 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 63/240 (26%), Positives = 102/240 (42%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG 172
SV + D + S D R+ D T + + GH V ++S D +L+S S+ G
Sbjct: 504 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 563
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
++ W QT L G+K + W+ + FVS D AR+W +
Sbjct: 564 TVRLWSLQTF----TCLVGYKGHNYPV-WD-TQFSPYGYYFVSGGHDRVARLWATDHYQP 617
Query: 233 VICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST 291
+ +GH V C ++ + TGS D T+++W+ G +R GH ++SL S
Sbjct: 618 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 677
Query: 292 EYA-LRTGAFDHTGKQYSSPEEMKKAALERYN----KIKGNAP-ERLVSGSDDFTMFLWE 345
L TGA D + + L+ + ++ + E L SGS D T+ LW+
Sbjct: 678 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 59 (25.8 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRP---VNRCSATIAGHTEAVLSVAFSPDGR 121
+PL + K+ +K++++ + V R+ P + C T + + +V + D
Sbjct: 425 IPLPELKDSDKL--DKIMNMKETTKRV-RLGPDCLPSICFYTFLNAYQGLTAVDVTDDSS 481
Query: 122 QLASGSGDTTVRLWDL 137
+A G D+TVR+W +
Sbjct: 482 LIAGGFADSTVRVWSV 497
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 246 (91.7 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 50/139 (35%), Positives = 77/139 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
VSG D LW QP GH VN F P+ +VA+ S D++++LW+ G
Sbjct: 601 VSGGHDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 659
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
V +F GH GP++ +++S + R L +G+ D + +WDI + +L GH D V ++ +
Sbjct: 660 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF 719
Query: 453 SPDGEKVASGGKDRVLKLW 471
S DGE +ASG D ++LW
Sbjct: 720 SRDGEILASGSMDNTVRLW 738
Score = 225 (84.3 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ V +FSPD L S S D TVRLW L T T + GH V +S G +
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 600
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSG + W +P +GH + ++ H N+ + S D R+W
Sbjct: 601 VSGGHDRVARLWATDHYQPL-RIFAGH---LADVNCTRFHPNS--NYVATGSADRTVRLW 654
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
DV CV +GH + + + +G + TG+ D + +W+ G ++ ELKGH V
Sbjct: 655 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV 714
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG--NAPE 330
SL S + L +G+ D+T + + + + + + + G N PE
Sbjct: 715 CSLRFSRDGEILASGSMDNTVRLWDAVKAFEDVETDDFTTATGHINLPE 763
Score = 191 (72.3 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 58/221 (26%), Positives = 102/221 (46%)
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIR 275
S D RI D + L GH+ V + D + + S+D T+++W +
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 579
Query: 276 ELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPE 330
KGH + V S Y +G D + +++ P + L N + +
Sbjct: 580 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 639
Query: 331 RLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
V+ GS D T+ LW+ ++ TGH+ ++ + FSP+G+++A+ + D + LW+
Sbjct: 640 NYVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
G V +GH V + +S D +L SGS D+T+++WD
Sbjct: 699 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 184 (69.8 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 48/172 (27%), Positives = 76/172 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH V FSP G SG D RLW + P+ GH V C +
Sbjct: 577 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 636
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ ++ +GS ++ WD G +GHK I +++ P N R + + D
Sbjct: 637 PNSNYVATGSADRTVRLWDVLNGN-CVRIFTGHKGPIHSLTFSP---NG--RFLATGATD 690
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQ 270
G +WD+ V L GHT V +++ DG ++ +GS D T+++W+ +
Sbjct: 691 GRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 742
Score = 175 (66.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 62/227 (27%), Positives = 103/227 (45%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+I G D T++VW T KL R +K ++ + ++ L + T +
Sbjct: 484 LIAGGFADSTVRVWSVTPKKL-RSVKQAAD-LSLIDKESDDVLERIMDEKTASEL----- 536
Query: 313 MKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTG---HQQLVNH 365
K + G + P+R L+S S+D T+ LW S Q T + G H V
Sbjct: 537 --KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW----SLQTFTCLVGYKGHNYPVWD 590
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDST 425
FSP G + S D+ +LW + + +F GH+ V + +S + +GS D T
Sbjct: 591 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 650
Query: 426 LKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD-RVLKLW 471
+++WD+ + GH + ++ +SP+G +A+G D RVL LW
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL-LW 696
Score = 168 (64.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 69/262 (26%), Positives = 108/262 (41%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG 172
SV + D + S D R+ D T + + GH V ++S D +L+S S+ G
Sbjct: 506 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 565
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
++ W QT L G+K + W+ + FVS D AR+W +
Sbjct: 566 TVRLWSLQTF----TCLVGYKGHNYPV-WD-TQFSPYGYYFVSGGHDRVARLWATDHYQP 619
Query: 233 VICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST 291
+ +GH V C ++ + TGS D T+++W+ G +R GH ++SL S
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 292 EYA-LRTGAFDHTGKQYSSPEEMKKAALERYN----KIKGNAP-ERLVSGSDDFTMFLWE 345
L TGA D + + L+ + ++ + E L SGS D T+ LW+
Sbjct: 680 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Query: 346 PA-----VSKQPKTRMTGHQQL 362
V T TGH L
Sbjct: 740 AVKAFEDVETDDFTTATGHINL 761
Score = 59 (25.8 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRP---VNRCSATIAGHTEAVLSVAFSPDGR 121
+PL + K+ +K++++ + V R+ P + C T + + +V + D
Sbjct: 427 IPLPELKDSDKL--DKIMNMKETTKRV-RLGPDCLPSICFYTFLNAYQGLTAVDVTDDSS 483
Query: 122 QLASGSGDTTVRLWDL 137
+A G D+TVR+W +
Sbjct: 484 LIAGGFADSTVRVWSV 499
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 246 (91.7 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 50/139 (35%), Positives = 77/139 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
VSG D LW QP GH VN F P+ +VA+ S D++++LW+ G
Sbjct: 601 VSGGHDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 659
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
V +F GH GP++ +++S + R L +G+ D + +WDI + +L GH D V ++ +
Sbjct: 660 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF 719
Query: 453 SPDGEKVASGGKDRVLKLW 471
S DGE +ASG D ++LW
Sbjct: 720 SRDGEILASGSMDNTVRLW 738
Score = 223 (83.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ V +FSPD L S S D TVRLW L T T + GH V +S G +
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 600
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSG + W +P +GH + ++ H N+ + S D R+W
Sbjct: 601 VSGGHDRVARLWATDHYQPL-RIFAGH---LADVNCTRFHPNS--NYVATGSADRTVRLW 654
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
DV CV +GH + + + +G + TG+ D + +W+ G ++ ELKGH V
Sbjct: 655 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV 714
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG--NAPE 330
SL S + L +G+ D+T + + + + + + + G N PE
Sbjct: 715 CSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPE 763
Score = 191 (72.3 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 58/221 (26%), Positives = 102/221 (46%)
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIR 275
S D RI D + L GH+ V + D + + S+D T+++W +
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 579
Query: 276 ELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPE 330
KGH + V S Y +G D + +++ P + L N + +
Sbjct: 580 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 639
Query: 331 RLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
V+ GS D T+ LW+ ++ TGH+ ++ + FSP+G+++A+ + D + LW+
Sbjct: 640 NYVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
G V +GH V + +S D +L SGS D+T+++WD
Sbjct: 699 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/169 (28%), Positives = 75/169 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH V FSP G SG D RLW + P+ GH V C +
Sbjct: 577 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 636
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ ++ +GS ++ WD G +GHK I +++ P N R + + D
Sbjct: 637 PNSNYVATGSADRTVRLWDVLNGN-CVRIFTGHKGPIHSLTFSP---NG--RFLATGATD 690
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
G +WD+ V L GHT V +++ DG ++ +GS D T+++W+
Sbjct: 691 GRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 177 (67.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+I G D T++VW T KL R +K + L+L + + + + ++ E
Sbjct: 484 LIAGGFADSTVRVWSVTPKKL-RSVKQ----ASDLSLIDKES--DDVLERIMDEKTASE- 535
Query: 313 MKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTG---HQQLVNH 365
K + G + P+R L+S S+D T+ LW S Q T + G H V
Sbjct: 536 -LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW----SLQTFTCLVGYKGHNYPVWD 590
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDST 425
FSP G + S D+ +LW + + +F GH+ V + +S + +GS D T
Sbjct: 591 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 650
Query: 426 LKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD-RVLKLW 471
+++WD+ + GH + ++ +SP+G +A+G D RVL LW
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL-LW 696
Score = 164 (62.8 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 63/240 (26%), Positives = 102/240 (42%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG 172
SV + D + S D R+ D T + + GH V ++S D +L+S S+ G
Sbjct: 506 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 565
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
++ W QT L G+K + W+ + FVS D AR+W +
Sbjct: 566 TVRLWSLQTF----TCLVGYKGHNYPV-WD-TQFSPYGYYFVSGGHDRVARLWATDHYQP 619
Query: 233 VICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST 291
+ +GH V C ++ + TGS D T+++W+ G +R GH ++SL S
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 292 EYA-LRTGAFDHTGKQYSSPEEMKKAALERYN----KIKGNAP-ERLVSGSDDFTMFLWE 345
L TGA D + + L+ + ++ + E L SGS D T+ LW+
Sbjct: 680 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 59 (25.8 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRP---VNRCSATIAGHTEAVLSVAFSPDGR 121
+PL + K+ +K++++ + V R+ P + C T + + +V + D
Sbjct: 427 IPLPELKDSDKL--DKIMNMKETTKRV-RLGPDCLPSICFYTFLNAYQGLTAVDVTDDSS 483
Query: 122 QLASGSGDTTVRLWDL 137
+A G D+TVR+W +
Sbjct: 484 LIAGGFADSTVRVWSV 499
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 246 (91.7 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 50/139 (35%), Positives = 77/139 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
VSG D LW QP GH VN F P+ +VA+ S D++++LW+ G
Sbjct: 602 VSGGHDRVARLWATD-HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG 660
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
V +F GH GP++ +++S + R L +G+ D + +WDI + +L GH D V ++ +
Sbjct: 661 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF 720
Query: 453 SPDGEKVASGGKDRVLKLW 471
S DGE +ASG D ++LW
Sbjct: 721 SRDGEILASGSMDNTVRLW 739
Score = 224 (83.9 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ V +FSPD L S S D TVRLW L T T + GH V +S G +
Sbjct: 542 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 601
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSG + W +P +GH + ++ H N+ + S D R+W
Sbjct: 602 VSGGHDRVARLWATDHYQPL-RIFAGH---LADVNCTRFHPNS--NYVATGSADRTVRLW 655
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
DV CV +GH + + + +G + TG+ D + +W+ G ++ ELKGH V
Sbjct: 656 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV 715
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG--NAPE 330
SL S + L +G+ D+T + + + + + + + G N PE
Sbjct: 716 CSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPE 764
Score = 191 (72.3 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 58/221 (26%), Positives = 102/221 (46%)
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIR 275
S D RI D + L GH+ V + D + + S+D T+++W +
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 580
Query: 276 ELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPE 330
KGH + V S Y +G D + +++ P + L N + +
Sbjct: 581 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 640
Query: 331 RLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
V+ GS D T+ LW+ ++ TGH+ ++ + FSP+G+++A+ + D + LW+
Sbjct: 641 NYVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
G V +GH V + +S D +L SGS D+T+++WD
Sbjct: 700 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 184 (69.8 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 48/172 (27%), Positives = 76/172 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH V FSP G SG D RLW + P+ GH V C +
Sbjct: 578 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFH 637
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ ++ +GS ++ WD G +GHK I +++ P N R + + D
Sbjct: 638 PNSNYVATGSADRTVRLWDVLNGN-CVRIFTGHKGPIHSLTFSP---NG--RFLATGATD 691
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQ 270
G +WD+ V L GHT V +++ DG ++ +GS D T+++W+ +
Sbjct: 692 GRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
Score = 175 (66.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 62/227 (27%), Positives = 103/227 (45%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+I G D T++VW T KL R +K ++ + ++ L + T +
Sbjct: 485 LIAGGFADSTVRVWSVTPKKL-RSVKQAAD-LSLIDKESDDVLERIMDEKTASEL----- 537
Query: 313 MKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTG---HQQLVNH 365
K + G + P+R L+S S+D T+ LW S Q T + G H V
Sbjct: 538 --KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW----SLQTFTCLVGYKGHNYPVWD 591
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDST 425
FSP G + S D+ +LW + + +F GH+ V + +S + +GS D T
Sbjct: 592 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 651
Query: 426 LKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD-RVLKLW 471
+++WD+ + GH + ++ +SP+G +A+G D RVL LW
Sbjct: 652 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL-LW 697
Score = 165 (63.1 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 68/262 (25%), Positives = 108/262 (41%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG 172
SV + D + S D R+ D T + + GH V ++S D +L+S S+ G
Sbjct: 507 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 566
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
++ W QT L G+K + W+ + FVS D AR+W +
Sbjct: 567 TVRLWSLQTF----TCLVGYKGHNYPV-WD-TQFSPYGYYFVSGGHDRVARLWATDHYQP 620
Query: 233 VICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST 291
+ +GH V C ++ + TGS D T+++W+ G +R GH ++SL S
Sbjct: 621 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 292 EYA-LRTGAFDHTGKQYSSPEEMKKAALERYN----KIKGNAP-ERLVSGSDDFTMFLWE 345
L TGA D + + L+ + ++ + E L SGS D T+ LW+
Sbjct: 681 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Query: 346 PA-----VSKQPKTRMTGHQQL 362
+ T TGH L
Sbjct: 741 AVKAFEDLETDDFTTATGHINL 762
Score = 59 (25.8 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRP---VNRCSATIAGHTEAVLSVAFSPDGR 121
+PL + K+ +K++++ + V R+ P + C T + + +V + D
Sbjct: 428 IPLPELKDSDKL--DKIMNMKETTKRV-RLGPDCLPSICFYTFLNAYQGLTAVDVTDDSS 484
Query: 122 QLASGSGDTTVRLWDL 137
+A G D+TVR+W +
Sbjct: 485 LIAGGFADSTVRVWSV 500
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 235 (87.8 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
S S D T LW P GH V+ V F P+ ++A+ S DK+++LW+ G
Sbjct: 397 SASHDRTARLWS-FDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 455
Query: 394 FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 453
V +F GH GPV +++S + + L S +D LK+WD+ + L ++L GH D + ++ +S
Sbjct: 456 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 515
Query: 454 PDGEKVASGGKDRVLKLW 471
PD VAS D +++W
Sbjct: 516 PDSSLVASASMDNSVRVW 533
Score = 214 (80.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 76/299 (25%), Positives = 132/299 (44%)
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S D K L +G ++ W ++ K P H+ + +HL C F+
Sbjct: 273 SPDSKLLAAGFDNSCIKLWSLRSKKLKSEP---HQ-----VDVSRIHL--ACD-FLEEED 321
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIREL 277
D D + ++ L GH V ++ D + + S+D +I+ W+
Sbjct: 322 DEDDNL-GTEMK----VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLY 376
Query: 278 KGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPER- 331
+GH + V L +S + + D T + +S P + L + +K +
Sbjct: 377 QGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 436
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L +GS D T+ LW + TGH+ V + FSP+G+++ASA D+ +KLW+ +
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRL-FTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 495
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
G RGH + +++S DS L+ S S D++++VWDIR+ G + E+ V
Sbjct: 496 GTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGV 554
Score = 186 (70.5 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 46/128 (35%), Positives = 62/128 (48%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AGH V V F P+ LA+GS D TVRLW + TGH+ VL +A+S +GK+
Sbjct: 419 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKY 478
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L S + L+ WD +G L GH IT +++ P SAS D R+
Sbjct: 479 LASAGEDQRLKLWDLASGTLY-KELRGHTDNITSLTFSP-----DSSLVASASMDNSVRV 532
Query: 225 WDVSLRKC 232
WD+ C
Sbjct: 533 WDIRSSHC 540
Score = 181 (68.8 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 42/140 (30%), Positives = 74/140 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S+D ++ W+ S GH V + SP + ASAS D++ +LW+
Sbjct: 353 LLSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDR 411
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ ++ GH+ V + + +S L +GS D T+++W + + GH V ++
Sbjct: 412 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLA 471
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+SP+G+ +AS G+D+ LKLW
Sbjct: 472 FSPNGKYLASAGEDQRLKLW 491
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 44/163 (26%), Positives = 76/163 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V + SP AS S D T RLW + P+ GH V C+ + + +L
Sbjct: 378 GHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 437
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+GS ++ W Q G S +GH+ + +++ P N + SA +D ++W
Sbjct: 438 ATGSTDKTVRLWSTQQGN-SVRLFTGHRGPVLSLAFSP---NG--KYLASAGEDQRLKLW 491
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D++ L GHT +T + + D ++ + S D +++VW+
Sbjct: 492 DLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWD 534
Score = 157 (60.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 51/199 (25%), Positives = 82/199 (41%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN--TQTPMFKCTGHKNWVLCIAWSAD 161
+ GH V S F D L S S D ++R WDL T T +++ + W L I S
Sbjct: 334 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI--SPH 391
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ S S + W P +GH + + + P N+ + S D
Sbjct: 392 SLYFASASHDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP---NS--NYLATGSTDKT 445
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+W V +GH V + + +G + + +D +K+W+ G L +EL+GH
Sbjct: 446 VRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGH 505
Query: 281 GHWVNSLALSTEYALRTGA 299
+ SL S + +L A
Sbjct: 506 TDNITSLTFSPDSSLVASA 524
Score = 152 (58.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 51/157 (32%), Positives = 68/157 (43%)
Query: 136 DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPL-SGHKK 194
D N T M GH V + AD L+S S+ ++ WD G + L GH
Sbjct: 324 DDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAY 381
Query: 195 WITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGV 253
+ + P L F SAS D AR+W + +GH V CVK+
Sbjct: 382 PVWDLDISPHSLY-----FASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 436
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
+ TGS D T+++W T QG +R GH V SLA S
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFS 473
Score = 148 (57.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 46/140 (32%), Positives = 66/140 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L +G D+ + LW + K + HQ V+ ++ + D D+ L GT
Sbjct: 279 LAAGFDNSCIKLWS---LRSKKLKSEPHQVDVSRIHLACD---FLEEEDDEDDNL--GTE 330
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
K V RGH GPVY + ADS LLS S+D +++ WD+ + GHA V+ +D
Sbjct: 331 MK---VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 387
Query: 452 WSPDGEKVASGGKDRVLKLW 471
SP AS DR +LW
Sbjct: 388 ISPHSLYFASASHDRTARLW 407
Score = 144 (55.7 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 37/119 (31%), Positives = 57/119 (47%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV--AVFRGHVGPVYQISWSAD 413
+ GH V F D + S S D SI+ W+ G F +++GH PV+ + S
Sbjct: 334 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAYPVWDLDISPH 391
Query: 414 SRLLLSGSKDSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S S S D T ++W RT L+ GH +V V + P+ +A+G D+ ++LW
Sbjct: 392 SLYFASASHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 449
Score = 66 (28.3 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 107 HTEAVLSVA-FSPDGRQLASGSGDTTVRLWDLNTQ 140
+TE +L+ A SPD + LA+G ++ ++LW L ++
Sbjct: 262 NTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLRSK 296
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 241 (89.9 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 49/138 (35%), Positives = 77/138 (55%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
SGS D T LW P GH V+ V F P+ ++A+ S DK+++LW+ G
Sbjct: 401 SGSHDRTARLWS-FDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 394 FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 453
V +F GH GPV +S+S + + L S +D LK+WD+ + L ++L GH D + ++ +S
Sbjct: 460 SVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFS 519
Query: 454 PDGEKVASGGKDRVLKLW 471
PD +AS D +++W
Sbjct: 520 PDSGLIASASMDNSVRVW 537
Score = 212 (79.7 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 63/224 (28%), Positives = 108/224 (48%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGH--W-VNSLALST 291
L GH V ++ D + + S+D +I+ W+ +GH + W V+ S
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSL 397
Query: 292 EYALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPER-LVSGSDDFTMFLWEP 346
+A +G+ D T + +S P + L + +K + L +GS D T+ LW
Sbjct: 398 YFA--SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
+ TGH+ V + FSP+G+++ASA D+ +KLW+ +G RGH +
Sbjct: 456 QQGNSVRL-FTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSIT 514
Query: 407 QISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+++S DS L+ S S D++++VWDIR+ G + E+ V
Sbjct: 515 SLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGV 558
Score = 192 (72.6 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 49/163 (30%), Positives = 79/163 (48%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V V SP ASGS D T RLW + P+ GH V C+ + + +L
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+GS ++ W Q G S +GH+ + +S+ P N + SA +D ++W
Sbjct: 442 ATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLSFSP---NG--KYLASAGEDQRLKLW 495
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWE 267
D++ L GHT ++T + + D G+I + S D +++VW+
Sbjct: 496 DLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWD 538
Score = 182 (69.1 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 45/128 (35%), Positives = 62/128 (48%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AGH V V F P+ LA+GS D TVRLW + TGH+ VL +++S +GK+
Sbjct: 423 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKY 482
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L S + L+ WD +G L GH IT +++ P SAS D R+
Sbjct: 483 LASAGEDQRLKLWDLASGTLF-KELRGHTDSITSLAFSP-----DSGLIASASMDNSVRV 536
Query: 225 WDVSLRKC 232
WD+ C
Sbjct: 537 WDIRSTCC 544
Score = 180 (68.4 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 42/140 (30%), Positives = 73/140 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S+D ++ W+ S GH V V SP + AS S D++ +LW+
Sbjct: 357 LLSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDR 415
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ ++ GH+ V + + +S L +GS D T+++W + + GH V ++
Sbjct: 416 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLS 475
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+SP+G+ +AS G+D+ LKLW
Sbjct: 476 FSPNGKYLASAGEDQRLKLW 495
Score = 167 (63.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 52/197 (26%), Positives = 80/197 (40%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH V S F D L S S D ++R WDL + T GH V + S
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSL 397
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+ SGS + W P +GH + + + P N+ + S D R
Sbjct: 398 YFASGSHDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP---NS--NYLATGSTDKTVR 451
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+W V +GH V + + +G + + +D +K+W+ G L +EL+GH
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTD 511
Query: 283 WVNSLALSTEYALRTGA 299
+ SLA S + L A
Sbjct: 512 SITSLAFSPDSGLIASA 528
Score = 149 (57.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/81 (41%), Positives = 45/81 (55%)
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
TG + + RGH GPVY + ADS LLS S+D +++ WD+ + GHA V+ V
Sbjct: 331 TGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV 390
Query: 451 DWSPDGEKVASGGKDRVLKLW 471
D SP ASG DR +LW
Sbjct: 391 DISPFSLYFASGSHDRTARLW 411
Score = 149 (57.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV--AVFRGHVGPVYQISWSAD 413
+ GH V F D + S S D SI+ W+ G F +++GH PV+ + S
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAYPVWDVDISPF 395
Query: 414 SRLLLSGSKDSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S SGS D T ++W RT L+ GH +V V + P+ +A+G D+ ++LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 453
Score = 146 (56.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 48/155 (30%), Positives = 66/155 (42%)
Query: 138 NTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPL-SGHKKWI 196
NT T M GH V + AD L+S S+ ++ WD G + L GH +
Sbjct: 330 NTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD--LGSFTNTVLYQGHAYPV 387
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIY 255
+ P L F S S D AR+W + +GH V CVK+ +
Sbjct: 388 WDVDISPFSLY-----FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLA 442
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
TGS D T+++W QG +R GH V SL+ S
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFS 477
Score = 59 (25.8 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 107 HTEAVLSVA-FSPDGRQLASGSGDTTVRLWDLNTQ 140
+TE +L+ A S D + LA+G ++ ++LW L ++
Sbjct: 266 NTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSK 300
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 252 (93.8 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 94/338 (27%), Positives = 154/338 (45%)
Query: 146 CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C H +WV + A +++G L W + GK + GH + G++W +
Sbjct: 107 CLLHDDWVSAV--EAKDNWILTGCYDNTLNIWTTK-GKHKLT-IPGHIAPVKGVTW--IS 160
Query: 206 LNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
L+ F SAS+D +W+ +++ +CV GH V C+ + TGS D
Sbjct: 161 LDEEKGVFASASQDQTVMLWEWNVKANSVECVQVCKGHERGVDCIAANRSKTRMATGSWD 220
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLA--LSTEYALRTGAFDHTGKQYSSPEEMKKAAL 318
+K+W T +R G S L TE A RT G + +
Sbjct: 221 TMLKIWSTD----VRN-DGDSQPSTSKRQKLDTEKA-RTPVLTLAGH---------RECI 265
Query: 319 ERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
I N LV+ S D T+ +W+ A+S K+ + GH+ + Y +G +A A
Sbjct: 266 SGVQWIDDNT---LVTSSWDHTIKIWDLALSGI-KSEICGHKSFFDLSYSHLNGLIIA-A 320
Query: 379 SFDKSIKLWN--GTTGKFVA-VFRGHVGPVYQISWSADSR-LLLSGSKDSTLKVWDIRTQ 434
S DK+++L++ G V + GH V + WS + L +SG+ D+ +K+WD R+
Sbjct: 321 SPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVKLWDYRSP 380
Query: 435 KLKQ-DLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
K +L GH D+V A DWS + + + SGG D ++++
Sbjct: 381 KAPIFELIGHEDKVLACDWS-NPKFILSGGSDNSVRVF 417
Score = 173 (66.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 44/169 (26%), Positives = 80/169 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+AGH E + V + D L + S D T+++WDL + GHK++ +++S
Sbjct: 257 TLAGHRECISGVQWIDDNT-LVTSSWDHTIKIWDLALSGIKSEICGHKSF-FDLSYSHLN 314
Query: 163 KHLVSGSKAGELQCWDPQTGKPS--GNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+++ S L+ +DP++ + + N GH +W+ + W + FVS + D
Sbjct: 315 GLIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYL----FVSGAYDN 370
Query: 221 DARIWDVSLRKCVIC-LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET 268
++WD K I L GH V W I +G D +++V+++
Sbjct: 371 HVKLWDYRSPKAPIFELIGHEDKVLACDWSNPKFILSGGSDNSVRVFKS 419
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 66/284 (23%), Positives = 116/284 (40%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN---NEE--KLPYAFYISDHELLVPLGSYLEKHKVSVEK 80
P N ++L+ ++N LL N E K+ + F ++ + +PLG +L++ ++S E
Sbjct: 30 PYSIRANVSNKELNVLINTLLKDSGNSEAGKVEFDFLLNGEFVKIPLGQHLKEREISFED 89
Query: 81 VLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQ 140
+ + Y V R P + H + V +V + D + +G D T+ +W +
Sbjct: 90 TVELEY----VERY-PAPEPQDCLL-HDDWVSAVE-AKDN-WILTGCYDNTLNIWTTKGK 141
Query: 141 TPMFKCTGHKNWVLCIAW-SADGKHLV--SGSKAGELQCWDPQTGKPSGNPLSGHKKWIT 197
+ GH V + W S D + V S S+ + W+ S + K
Sbjct: 142 HKL-TIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNVKANSVECVQVCKGHER 200
Query: 198 GISWEPVHLNAPCRRFVSASKDGDARIWDVSLR------------------KC---VICL 236
G+ + + N R + S D +IW +R K V+ L
Sbjct: 201 GV--DCIAANRSKTRMATGSWDTMLKIWSTDVRNDGDSQPSTSKRQKLDTEKARTPVLTL 258
Query: 237 SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+GH ++ V+W D + T S D TIK+W+ + E+ GH
Sbjct: 259 AGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALSGIKSEICGH 302
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 252 (93.8 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 101/385 (26%), Positives = 170/385 (44%)
Query: 107 HTEAVLSVAFSPDGRQL--ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
H+E V F+ L A+GS D ++LWDLN + GH N V +S D K
Sbjct: 698 HSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKL 757
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS--WEPVHLNAPC-------RRFVS 215
L S S G L+ WD + + K++ + E + + C R +
Sbjct: 758 LASCSADGTLKLWDATSANERKS--INVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMV 815
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQ---- 270
A+K+ +W+ R V GH V V + DG + T S D TI++WET +
Sbjct: 816 AAKN-KIFLWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKN 874
Query: 271 -GKLIRELKGHGHWVNS-LALSTEYALRTGAFD-HTGK-QYSSPEEMKKAALERYNKIKG 326
++++ N + L+ ++ R + TG+ Y + ++ L + +
Sbjct: 875 SAVMLKQEVDVVFQENEVMVLAVDHIRRLQLINGRTGQIDYLTEAQVSCCCLSPHLQY-- 932
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ G ++ + + E ++ ++R H++ V H+ F+ D + + S+S D I++
Sbjct: 933 -----IAFGDENGAIEILELVNNRIFQSRFQ-HKKTVWHIQFTADEKTLISSSDDAEIQV 986
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
WN K + + RGH V +SRLL S S D T+KVW+I T ++D H
Sbjct: 987 WNWQLDKCIFL-RGHQETVKDFRLLKNSRLL-SWSFDGTVKVWNIITGNKEKDFVCHQGT 1044
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V + D S D K +S D+ K+W
Sbjct: 1045 VLSCDISHDATKFSSTSADKTAKIW 1069
Score = 212 (79.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 74/256 (28%), Positives = 118/256 (46%)
Query: 239 HTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-L 295
HT AV C G + G+ D T++V++ G+ + E+K H V A ST+ +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGA-DKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFI 672
Query: 296 RTGAFDHTGKQYSSPE-EMKKAALERYNKIK----GNAPERLV--SGSDDFTMFLWEPAV 348
T + D K ++S E+ E ++ N+ L+ +GS D + LW+
Sbjct: 673 ATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWD-LN 731
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG---KFVAV---FRGHV 402
K+ + M GH VNH FSPD + +AS S D ++KLW+ T+ K + V F
Sbjct: 732 QKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLE 791
Query: 403 GP-------VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 455
P V SWSAD ++ +K+ +W+ ++ D GH V V +SPD
Sbjct: 792 DPQEDMEVIVKCCSWSADGARIMVAAKNKIF-LWNTDSRSKVADCRGHLSWVHGVMFSPD 850
Query: 456 GEKVASGGKDRVLKLW 471
G + D+ ++LW
Sbjct: 851 GSSFLTSSDDQTIRLW 866
Score = 176 (67.0 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 43/175 (24%), Positives = 84/175 (48%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + + H++ VLC A
Sbjct: 605 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 664
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+S D + + + S +++ W+ TG+ + H + + H + A+
Sbjct: 665 FSTDDRFIATCSVDKKVKIWNSMTGELV-HTYDEHSEQVNCC-----HFTNSSHHLLLAT 718
Query: 218 KDGDA--RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETT 269
D ++WD++ ++C + GHT +V ++ D + S D T+K+W+ T
Sbjct: 719 GSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDAT 773
Score = 138 (53.6 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 47/157 (29%), Positives = 72/157 (45%)
Query: 324 IKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
I+ A E+ L+S SDD + +W + K R GHQ+ V + + + S SFD
Sbjct: 966 IQFTADEKTLISSSDDAEIQVWNWQLDKCIFLR--GHQETVKDFRLLKNSR-LLSWSFDG 1022
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKL------ 436
++K+WN TG F H G V S D+ S S D T K+W++ +L
Sbjct: 1023 TVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWNVSNGELLHLCAP 1082
Query: 437 --KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
++ H V + +SPDG+ + S G +K W
Sbjct: 1083 LSEEGAATHGGWVTDLCFSPDGKMLISAGG--YIKWW 1117
Score = 82 (33.9 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 43/173 (24%), Positives = 68/173 (39%)
Query: 239 HTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRT 297
H V +++ D + + S D I+VW K I L+GH V L L +
Sbjct: 959 HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETVKDFRLLKNSRLLS 1017
Query: 298 GAFDHTGKQYS--SPEEMKKAALERYNKIK---GNAPERLVSGSDDFTMFLWEPAVSK-- 350
+FD T K ++ + + K + + + + S S D T +W + +
Sbjct: 1018 WSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWNVSNGELL 1077
Query: 351 ---QPKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVF 398
P + H V + FSPDG+ + SA IK WN TG+ F
Sbjct: 1078 HLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG--GYIKWWNVVTGESSQTF 1128
Score = 81 (33.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
A GH V V FSPDG + S D T+RLW+
Sbjct: 833 ADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE 867
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 256 (95.2 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 78/242 (32%), Positives = 121/242 (50%)
Query: 234 ICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
+ LSGH+ V C++ + ++ +GS D TI++W + + L+GH V L +
Sbjct: 267 VVLSGHSDGVMCLQLVRN-ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFD-QC 324
Query: 294 ALRTGAFDHTGK--QYSSPE--EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVS 349
L +G+ D T + Y + E + + + ++ LVSGS D T+ LW +
Sbjct: 325 KLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST-LLVSGSADCTVKLWHFSGG 383
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
K+ R GH VN V D V S S D +IK+W+ T + F H+GPV ++
Sbjct: 384 KRITLR--GHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLA 441
Query: 410 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 469
ADSRL S S D T+K WDI +K L GH + V+ + + D ++ SG D V+K
Sbjct: 442 L-ADSRLF-SCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEI--AADHLRLISGAHDGVVK 497
Query: 470 LW 471
+W
Sbjct: 498 VW 499
Score = 238 (88.8 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 90/296 (30%), Positives = 138/296 (46%)
Query: 99 RC-SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
RC ++GH++ V+ + + LASGS D T+RLW+L T + GH + V C+
Sbjct: 263 RCRQVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQ 320
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ D L+SGS ++ W+ +T + + L GH + ++++ L VS S
Sbjct: 321 F--DQCKLISGSMDKTIRIWNYRTSECI-SILHGHTDSVLCLTFDSTLL-------VSGS 370
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRE 276
D ++W S K I L GHT V V+ D G++ +GS D TIK+W +
Sbjct: 371 ADCTVKLWHFSGGKR-ITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHT 429
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APE--R 331
H V SLAL+ + L + + D T KQ+ E KK + I+G A + R
Sbjct: 430 FSAHIGPVQSLALA-DSRLFSCSLDGTIKQWDI--EKKKCVHTLFGHIEGVWEIAADHLR 486
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L+SG+ D + +WE + H + V V D + V S S D I LW
Sbjct: 487 LISGAHDGVVKVWEACECVHT---LKNHSEPVTSVALG-DCE-VVSGSEDGKIYLW 537
Score = 223 (83.6 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 79/263 (30%), Positives = 129/263 (49%)
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
S S D R+W+++ + V L GH+ VTC+++ +I +GS D TI++W + I
Sbjct: 288 SGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLI-SGSMDKTIRIWNYRTSECI 346
Query: 275 RELKGHGHWVNSLALSTEYALR-TGAFDHTGK--QYSSPEEMK-KAALERYNKIKGNAPE 330
L HGH + L L+ + L +G+ D T K +S + + + N ++
Sbjct: 347 SIL--HGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDR 404
Query: 331 RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
LV SGSDD T+ +W + T + H V + + D + + S S D +IK W+
Sbjct: 405 GLVLSGSDDSTIKIWSLETNTCLHT-FSAHIGPVQSLALA-DSR-LFSCSLDGTIKQWDI 461
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
K V GH+ V++I+ AD L+SG+ D +KVW+ + L H++ V +
Sbjct: 462 EKKKCVHTLFGHIEGVWEIA--ADHLRLISGAHDGVVKVWE--ACECVHTLKNHSEPVTS 517
Query: 450 VDWSPDGEKVASGGKDRVLKLWM 472
V D E V SG +D + LW+
Sbjct: 518 VALG-DCE-VVSGSEDGKIYLWL 538
Score = 182 (69.1 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 58/193 (30%), Positives = 89/193 (46%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
+ C + + GHT++VL + F D L SGS D TV+LW + + GH V +
Sbjct: 343 SECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVR 399
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
D ++SGS ++ W +T + S H + ++ A R F S S
Sbjct: 400 IIRDRGLVLSGSDDSTIKIWSLETNTCL-HTFSAHIGPVQSLAL------ADSRLF-SCS 451
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRE 276
DG + WD+ +KCV L GH V + D + + +G+ D +KVWE + +
Sbjct: 452 LDGTIKQWDIEKKKCVHTLFGHIEGVWEI--AADHLRLISGAHDGVVKVWEACE--CVHT 507
Query: 277 LKGHGHWVNSLAL 289
LK H V S+AL
Sbjct: 508 LKNHSEPVTSVAL 520
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 234 (87.4 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 78/291 (26%), Positives = 127/291 (43%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI--CLSGHTLAVTCVKWG 249
H I ++W N +S S D ++W + K + L GH L V V
Sbjct: 15 HDDAIWSVAWGKNKKNGS-ETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDIS 73
Query: 250 GDGVIYTGSQ-DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQ- 306
G I S D I++W+ GK I+ + SLA S + L TG+ H GK
Sbjct: 74 HTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGS--HVGKVN 131
Query: 307 -YSSPEEMKKAALERYNKIK---GNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ K+ +L+ K +P+ L SG+ D + +++ A K T + GH
Sbjct: 132 IFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT-LEGHA 190
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSG 420
+ + FSPD Q + +AS D IK+++ GH V +++ D +S
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSS 250
Query: 421 SKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S D ++KVWD T+ H D+V+ V ++ G K+ S G D+ + ++
Sbjct: 251 SSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 209 (78.6 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 50/158 (31%), Positives = 82/158 (51%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WD R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHGSWVLNVAFCPDDTH-----FVSSSSDKSVKVWDAGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G G I + D I +++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 189 (71.6 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 66/221 (29%), Positives = 107/221 (48%)
Query: 48 NEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGH 107
N+EKL + + H+L V S H S+ S+ + ++ + + + AG
Sbjct: 50 NDEKLDLQWTLEGHQLGVV--SVDISHTGSIAASSSLDAHIR-LWDLETGKQIKSIDAGP 106
Query: 108 TEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVS 167
+A S+AFSPD + LA+GS V ++ + T + ++L IA+S DGK+L S
Sbjct: 107 VDA-WSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 168 GSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
G+ G + +D TGK + L GH I +++ P + V+AS DG +I+DV
Sbjct: 166 GAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKIYDV 219
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
LSGH V V + D + + S D ++KVW+
Sbjct: 220 QHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 164 (62.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 68/294 (23%), Positives = 126/294 (42%)
Query: 149 HKNWVLCIAWSADGKH----LVSGSKAGELQCWDPQTGKPSGN-PLSGHKKWITGISWEP 203
H + + +AW + K+ ++SGS ++ W K L GH+ + +S +
Sbjct: 15 HDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGV--VSVDI 72
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
H + S+S D R+WD+ K + + + + + D + TGS
Sbjct: 73 SHTGSIA---ASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGK 129
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERY 321
+ ++ GK L G ++ S+A S + L +GA D + LE +
Sbjct: 130 VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 322 NK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
I+ +P+ LV+ SDD + +++ + T ++GH V +V F PD
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHGSWVLNVAFCPDDTHFV 248
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
S+S DKS+K+W+ T V F H V+ + ++ ++S D + ++D
Sbjct: 249 SSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 245 THFVSSSSDKSVKVWDAGT-RTCVHTFFDHQDQVWGVKY-----NGSGSKIVSVGDDQEI 298
Query: 223 RIWD 226
I+D
Sbjct: 299 HIYD 302
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ G +VS E+ +D
Sbjct: 275 DQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 251 (93.4 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 88/334 (26%), Positives = 154/334 (46%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + ++SGS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIEGAEEW--ILSGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVI----CLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ ++AS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGHAGSVDAIAVDSSGAKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ +T + + G +P E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------ATNRPRKKQKTEQLGLT-RTPLVTLSGHTE 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AISSVLWSDAEEICSASWDHTIRVWD-VESGGLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQK 435
D+ I+LW+ T G V++ H G V + WS + L+SGS D+ +K+WD R+ K
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCK 376
Query: 436 LK-QDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
DL H D+V +VDW+ G + SGG D L
Sbjct: 377 APLYDLAAHEDKVLSVDWTDTG-LLLSGGADNKL 409
Score = 235 (87.8 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 54/161 (33%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHTEA+ SV +S D ++ S S D T+R+WD+ + TG+K + CI++S
Sbjct: 252 TLSGHTEAISSVLWS-DAEEICSASWDHTIRVWDVESGGLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 234 (87.4 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 83/320 (25%), Positives = 150/320 (46%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + EL+ + T P H WI+ I + +S S D +RIW
Sbjct: 75 ISSEEVVELEYVEKYTA-PQPEQCMFHDDWISSIEGAEEWI-------LSGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + T S D T+ +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCC 185
Query: 278 KGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
+GH V+++A+ + A +G++D K +S+ ++ +E N P +
Sbjct: 186 RGHAGSVDAIAVDSSGAKFCSGSWDKMLKIWSTVPTDEEDEMEEAT----NRPRKKQKTE 241
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
+ +++ P ++GH + ++ V +S D + + SAS+D +I++W+ +G +
Sbjct: 242 --------QLGLTRTPLVTLSGHTEAISSVLWS-DAEEICSASWDHTIRVWDVESGGLKS 292
Query: 397 VFRGHVGPVYQ-ISWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDW 452
G+ V+ IS+S + L SGS D +++WD RT+ + L H V +V W
Sbjct: 293 TLTGN--KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 453 SPDGEK-VASGGKDRVLKLW 471
SP E+ + SG D ++KLW
Sbjct: 351 SPTHEQQLISGSLDNIVKLW 370
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 54/179 (30%), Positives = 87/179 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH + + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPLVTLSGHTEAISSVLWS-DAEEICSASWDHTIRVWDVESGGLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SP 310
+ +GS D +K+W+T K + +L H V S+ + L +G D+ YS SP
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 416
Score = 136 (52.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 55/210 (26%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLNNEEKL----PYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P A LS I+NKLL + +L + F I L VPL ++E +S E+V
Sbjct: 21 PFSIPAAAEVADLSNIINKLLETKNELHKHVEFDFLIKGQFLRVPLVKHMELENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + S+ + + + SGS D T R+W L ++
Sbjct: 81 VELEYVEK--YTAPQPEQCMF----HDDWISSIEGAEEW--ILSGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L++ S + W+ K L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ +F S S D +IW
Sbjct: 189 -AG-SVDAIAVDSSGAKFCSGSWDKMLKIW 216
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 258 (95.9 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 73/242 (30%), Positives = 117/242 (48%)
Query: 239 HTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYAL 295
H+ AV C+K G V+ TG +D + +W + I L GH ++S+ ++E +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 296 RTGAFDHTGKQYSSPEEMKKAAL--ERYNKIKGNA-P--ERLVSGSDDFTMFLWEPAVSK 350
GA T K + E L R N I + P E SGS D + +W+ + K
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD--IRK 132
Query: 351 QPKTRM-TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
+ GH + VN + F+PDG+WV S D +K+W+ T GK + F+ H G + +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 192
Query: 410 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 469
+ LL +GS D T+K WD+ T +L V + ++PDG+ V G ++ LK
Sbjct: 193 FHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQES-LK 251
Query: 470 LW 471
++
Sbjct: 252 IF 253
Score = 233 (87.1 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 57/202 (28%), Positives = 94/202 (46%)
Query: 107 HTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H+ AV + R L +G D V LW + + GH + + + + A +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+G+ +G ++ WD + K L+GH+ + + P F S S D + +IW
Sbjct: 75 AAGAASGTIKLWDLEEAKIV-RTLTGHRSNCISVDFHPFG-----EFFASGSLDTNLKIW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+ + C+ GHT V +++ DG + +G +D +KVW+ T GKL+ E K H +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQI 188
Query: 285 NSLALST-EYALRTGAFDHTGK 305
SL E+ L TG+ D T K
Sbjct: 189 QSLDFHPHEFLLATGSADRTVK 210
Score = 226 (84.6 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 61/213 (28%), Positives = 106/213 (49%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHTGKQYSSPEEMKKAALERYNKIK 325
T + ++E H VN L + + + L TG DH ++ + A L Y
Sbjct: 3 TKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP--NAILSLYGHSS 60
Query: 326 G------NAPERLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
G +A E LV+ G+ T+ LW+ +K +T +TGH+ V F P G++ AS
Sbjct: 61 GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRT-LTGHRSNCISVDFHPFGEFFASG 119
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
S D ++K+W+ + ++GH V + ++ D R ++SG +D+ +KVWD+ KL
Sbjct: 120 SLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLT 179
Query: 439 DLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ H ++ ++D+ P +A+G DR +K W
Sbjct: 180 EFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 172 (65.6 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH +SV F P G ASGS DT +++WD+ + + GH V + ++ DG
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSG + ++ WD GK H+ I + + P + S D
Sbjct: 156 RWVVSGGEDNIVKVWDLTAGKLL-TEFKSHEGQIQSLDFHPHEF-----LLATGSADRTV 209
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKV--WE 267
+ WD+ + + T V C+ + DG + G Q+ ++K+ WE
Sbjct: 210 KFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFSWE 256
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ + SV F +A+G+ T++LWDL + TGH++ + + + G
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ SGS L+ WD + K + GH + + + + P R VS +D
Sbjct: 114 EFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTP-----DGRWVVSGGEDNIV 167
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLI 274
++WD++ K + H + + + + ++ TGS D T+K W+ +LI
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELI 220
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 166 (63.5 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 44/154 (28%), Positives = 77/154 (50%)
Query: 332 LVSGSDDFTMFLW---EPAVSK-----------QPKTRMTGHQQLVNHVYFSPDGQWVAS 377
LV+GS D T+ LW + +SK Q +T H + +N V +P+ + +A+
Sbjct: 437 LVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLAT 496
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLK 437
S D++ KLW + + VF GH ++ + +S ++L + S D T+K+W ++
Sbjct: 497 GSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL 556
Query: 438 QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ GH V V + G ++ S G D ++KLW
Sbjct: 557 KTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLW 590
Score = 163 (62.4 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 44/141 (31%), Positives = 71/141 (50%)
Query: 332 LVSGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
L +GS D T LW A+ + Q +GH++ + V FSP Q +A+AS D +IKLW
Sbjct: 494 LATGSQDRTAKLW--ALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 551
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+ F GH V ++++ + LLS D +K+W I+ + + L H D+V+ +
Sbjct: 552 DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGL 611
Query: 451 DWSPDGEKVASGGKDRVLKLW 471
S + +G D + LW
Sbjct: 612 HCSRLDDHALTGASDSRVILW 632
Score = 143 (55.4 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 48/189 (25%), Positives = 86/189 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLA--SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
G V VAF PD +L S + D +R+W L ++ + T H + V +A+SADG
Sbjct: 149 GSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGH 208
Query: 164 HLVSGSKAGELQCWDPQTGKPSGN-PLSGHKKWITGISWEPVH---LNAPCRRFVSASKD 219
++S + WD Q+ + + P+ + + EPV + +P F++A
Sbjct: 209 TMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQ 268
Query: 220 GDARIWDVSLRKCVICLS---GHTLAVT-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
G R+W+ + +CV + G +T C GV+ T + D + ++E +L +
Sbjct: 269 GTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARSLRLQK 328
Query: 276 ELKGHGHWV 284
+ G+ V
Sbjct: 329 QFAGYSEEV 337
Score = 138 (53.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 42/172 (24%), Positives = 77/172 (44%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H + + SVA +P+ + LA+GS D T +LW L + +GH+ + C+ +S + L
Sbjct: 478 HDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLA 537
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
+ S G ++ W Q GH + +++ V + +S+ DG ++W
Sbjct: 538 TASADGTIKLWALQDFSCL-KTFEGHDASVLKVAF--VSRGT---QLLSSGSDGLVKLWT 591
Query: 227 VSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVW-ETTQGKLIRE 276
+ +CV L H V + D TG+ D + +W + T+ + E
Sbjct: 592 IKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKDVTEAEQAEE 643
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/146 (26%), Positives = 71/146 (48%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTG--HQQLVNHVYFSPDGQWVASASFDKSIKLW 387
E LV+ S + W A + TR+ H V + F P +A+ D ++++W
Sbjct: 79 EVLVTASRALLLAQW--AWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVW 136
Query: 388 NGTTGKFVAVFRGHVGPVYQISWSAD-SRLLL-SGSKDSTLKVWDIRTQKLKQDLPGHAD 445
+ FRG G V+ +++ D +RLLL S + D+ ++VW ++ + L H
Sbjct: 137 DIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYS 196
Query: 446 EVFAVDWSPDGEKVASGGKDRVLKLW 471
V ++ +S DG + S G+D++ +W
Sbjct: 197 AVTSLAFSADGHTMLSSGRDKICIIW 222
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC---- 146
VF ++ + C + GHT+ VL++ G AS + D +VR+W +N + C
Sbjct: 361 VFELQ-TSACQI-LHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMN-KAGQVMCVAQG 417
Query: 147 TGHKNWVLCIAWSA-DGKHLVSGSKAGELQCWD-PQT--GK---PSGNPLSGHKKWITGI 199
+GH + V + S LV+GS+ ++ W P+ K P P+ +
Sbjct: 418 SGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRC 477
Query: 200 SWEPVH--LNAPCRRFVSA-SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGG-DGV 253
+ ++ AP + ++ S+D A++W +L +C + SGH + CV++ D V
Sbjct: 478 HDKDINSVAIAPNDKLLATGSQDRTAKLW--ALPQCQLLGVFSGHRRGLWCVQFSPMDQV 535
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGH 280
+ T S D TIK+W ++ +GH
Sbjct: 536 LATASADGTIKLWALQDFSCLKTFEGH 562
Score = 123 (48.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 52/209 (24%), Positives = 95/209 (45%)
Query: 125 SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW-SADGKHLVSGSKAGELQCWDPQTGK 183
+ + D + L++ + + G+ VL + + + H+V S + L+ ++ QT
Sbjct: 309 TATADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTS- 367
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL---SGHT 240
+ L GH + + V F S +KD RIW ++ V+C+ SGHT
Sbjct: 368 -ACQILHGHTDIVLALD---VFRKGWL--FASCAKDQSVRIWRMNKAGQVMCVAQGSGHT 421
Query: 241 LAV--TCVKWGGDGVIYTGSQDCTIKVW--------ETT---QGKLIRELKG----HGHW 283
+V C + + TGSQDCT+K+W + T G ++ + + H
Sbjct: 422 HSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKD 481
Query: 284 VNSLALS-TEYALRTGAFDHTGKQYSSPE 311
+NS+A++ + L TG+ D T K ++ P+
Sbjct: 482 INSVAIAPNDKLLATGSQDRTAKLWALPQ 510
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 76/339 (22%), Positives = 134/339 (39%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
HT V ++AF P LA+G D VR+WD+ G V +A+ D L+
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 167 SGSKAGE--LQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S A + ++ W Q + L+ H +T +++ +A +S+ +D I
Sbjct: 168 LFSSATDAAIRVWSLQD-RSCLAVLTAHYSAVTSLAF-----SADGHTMLSSGRDKICII 221
Query: 225 WDV----SLR--------KCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
WD+ + R + + L ++ VK G + G Q T++VWE G+
Sbjct: 222 WDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQG-TLRVWEAASGQ 280
Query: 273 LI---RELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA 328
+ + G G + L+ T + T DH Y E + L++ + G +
Sbjct: 281 CVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLY----EARSLRLQK--QFAGYS 334
Query: 329 PE----RLVSGSDDFTMFLWEPAVSK--QPKTR----MTGHQQLVNHVYFSPDGQWVASA 378
E R + D + K + +T + GH +V + G AS
Sbjct: 335 EEVLDVRFLGPEDSHVVVASNSPCLKVFELQTSACQILHGHTDIVLALDVFRKGWLFASC 394
Query: 379 SFDKSIKLWN-GTTGKFVAVFRGHVGPVYQISWSADSRL 416
+ D+S+++W G+ + V +G G + + SRL
Sbjct: 395 AKDQSVRIWRMNKAGQVMCVAQGS-GHTHSVGTVCCSRL 432
Score = 109 (43.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 37/143 (25%), Positives = 68/143 (47%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
++ D T+ +WE A + T+ G Q + H + V +A+ D ++ L+
Sbjct: 263 LTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEAR 322
Query: 391 TGKFVAVFRGHVGPVYQISWSA--DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
+ + F G+ V + + DS ++++ S LKV++++T Q L GH D V
Sbjct: 323 SLRLQKQFAGYSEEVLDVRFLGPEDSHVVVA-SNSPCLKVFELQTSAC-QILHGHTDIVL 380
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
A+D G AS KD+ +++W
Sbjct: 381 ALDVFRKGWLFASCAKDQSVRIW 403
Score = 90 (36.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN----TQT-PMFKCTGH----- 149
C A + H AV S+AFS DG + S D +WDL T+T P+F+
Sbjct: 187 CLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLP 246
Query: 150 KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGK 183
+ V + + G + ++ G L+ W+ +G+
Sbjct: 247 EEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQ 280
Score = 88 (36.0 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 40/150 (26%), Positives = 64/150 (42%)
Query: 251 DGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTEYALRTGAFDHTGKQYS 308
D ++ TGSQD T K+W Q +L+ GH G W + + L T + D T K ++
Sbjct: 491 DKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFS-PMDQVLATASADGTIKLWA 549
Query: 309 SPEEMKKAALERYN----KIK--GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ E ++ K+ + L SGSD LW ++ +T + H+
Sbjct: 550 LQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVK-LWTIKNNECVRT-LDAHEDK 607
Query: 363 VNHVYFSP-DGQWVASASFDKSIKLWNGTT 391
V ++ S D + AS D + LW T
Sbjct: 608 VWGLHCSRLDDHALTGAS-DSRVILWKDVT 636
>UNIPROTKB|B4LS78 [details] [associations]
symbol:GJ17641 "Ribosome biogenesis protein WDR12 homolog"
species:7244 "Drosophila virilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH940649 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_002052609.1 ProteinModelPortal:B4LS78 STRING:B4LS78
EnsemblMetazoa:FBtr0233566 GeneID:6629233 KEGG:dvi:Dvir_GJ17641
FlyBase:FBgn0204810 InParanoid:B4LS78 Uniprot:B4LS78
Length = 419
Score = 178 (67.7 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 46/145 (31%), Positives = 83/145 (57%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LV+GS D T+ +W+ + + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 265 LVTGSWDHTLKVWDLQL-EGIKTEISTNKSIFDASY-SKLNRLIVTASADKNLRLYDART 322
Query: 392 --GKFVA-VFRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHADE 446
G V + GH V + WS + L +SGS D+ K+WD R+ K DL GH ++
Sbjct: 323 NQGSVVRNTYLGHNAWVQTVMWSNTEEFLFVSGSYDTQNKLWDCRSPKAPLYDLLGHGEK 382
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V +DWS + + + SGG D ++++
Sbjct: 383 VLDIDWS-NPKYIVSGGADNTVRVF 406
Score = 174 (66.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 63/232 (27%), Positives = 101/232 (43%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW----------------DLNTQTPM 143
C + GH V SV SPD ++ A+GS DT +++W + +TP
Sbjct: 185 CVSVCKGHERGVDSVCVSPDAQRFATGSWDTMLKIWSAGLDDTSEGTAKRVKESGVRTPK 244
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ + + W D LV+GS L+ WD Q + +S +K I S+
Sbjct: 245 MTLQGHRESISAVQWM-DATTLVTGSWDHTLKVWDLQL-EGIKTEISTNKS-IFDASYSK 301
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R V+AS D + R++D + + + GH V V W + + +GS
Sbjct: 302 --LN---RLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVMWSNTEEFLFVSGS 356
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
D K+W+ K + +L GHG V + S + +G D+T + + S
Sbjct: 357 YDTQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGADNTVRVFKS 408
Score = 161 (61.7 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 55/218 (25%), Positives = 103/218 (47%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMK------KAALERYNKIKGNAPE-RL 332
H WV+++ ++ L TG +D+T +++ + K A ++ + I + R
Sbjct: 104 HDDWVSAVKACGKWIL-TGCYDNTINIWTNKGKHKLTIPGHTAPIKAVDWISMDDENGRF 162
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
VS S D T LW+ ++ ++ GH++ V+ V SPD Q A+ S+D +K+W+
Sbjct: 163 VSTSQDQTAMLWQWNIASNAVECVSVCKGHERGVDSVCVSPDAQRFATGSWDTMLKIWSA 222
Query: 390 T-------TGKFVA---------VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT 433
T K V +GH + + W D+ L++GS D TLKVWD++
Sbjct: 223 GLDDTSEGTAKRVKESGVRTPKMTLQGHRESISAVQWM-DATTLVTGSWDHTLKVWDLQL 281
Query: 434 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ +K ++ + +F +S + + D+ L+L+
Sbjct: 282 EGIKTEISTNKS-IFDASYSKLNRLIVTASADKNLRLY 318
Score = 120 (47.3 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 146 CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C H +WV + A GK +++G + W + GK + GH I + W +
Sbjct: 101 CLLHDDWVSAV--KACGKWILTGCYDNTINIWTNK-GKHKLT-IPGHTAPIKAVDW--IS 154
Query: 206 LNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQD 260
++ RFVS S+D A +W ++ +CV GH V V D + TGS D
Sbjct: 155 MDDENGRFVSTSQDQTAMLWQWNIASNAVECVSVCKGHERGVDSVCVSPDAQRFATGSWD 214
Query: 261 CTIKVW-----ETTQG--KLIRE 276
+K+W +T++G K ++E
Sbjct: 215 TMLKIWSAGLDDTSEGTAKRVKE 237
Score = 120 (47.3 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 59/255 (23%), Positives = 101/255 (39%)
Query: 37 QLSQIVNKLLNNE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRI 94
+L+ +N LL ++ E + + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNIFLNALLQSKGAEGVDFDFLVFDEYLRGRLCDHLREKAISFEDAIDIEYVER--FPA 95
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
C H + V +V G+ + +G D T+ +W N GH +
Sbjct: 96 PEPQDCLL----HDDWVSAVKAC--GKWILTGCYDNTINIWT-NKGKHKLTIPGHTAPIK 148
Query: 155 CIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLNA 208
+ W S D ++ VS S+ W + +S GH++ + + P
Sbjct: 149 AVDWISMDDENGRFVSTSQDQTAMLWQWNIASNAVECVSVCKGHERGVDSVCVSP----- 203
Query: 209 PCRRFVSASKDGDARIWDVSL----------------RKCVICLSGHTLAVTCVKWGGDG 252
+RF + S D +IW L R + L GH +++ V+W
Sbjct: 204 DAQRFATGSWDTMLKIWSAGLDDTSEGTAKRVKESGVRTPKMTLQGHRESISAVQWMDAT 263
Query: 253 VIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 TLVTGSWDHTLKVWD 278
Score = 116 (45.9 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 33/126 (26%), Positives = 62/126 (49%)
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIS 409
+ PK + GH++ ++ V + D + + S+D ++K+W+ + ++ S
Sbjct: 241 RTPKMTLQGHRESISAVQWM-DATTLVTGSWDHTLKVWDLQLEGIKTEISTNKS-IFDAS 298
Query: 410 WSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGKD 465
+S +RL+++ S D L+++D RT + ++ GH V V WS E + SG D
Sbjct: 299 YSKLNRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVMWSNTEEFLFVSGSYD 358
Query: 466 RVLKLW 471
KLW
Sbjct: 359 TQNKLW 364
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 243 (90.6 bits), Expect = 8.9e-19, Sum P(2) = 8.9e-19
Identities = 49/139 (35%), Positives = 77/139 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
VSG D LW QP GH VN + P+ +VA+ S D++++LW+ G
Sbjct: 602 VSGGHDRVARLWATD-HYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNG 660
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
V +F GH GP++ +++S + R L +G+ D + +WDI + +L GH D V ++ +
Sbjct: 661 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF 720
Query: 453 SPDGEKVASGGKDRVLKLW 471
S DGE +ASG D ++LW
Sbjct: 721 SRDGEILASGSMDNTVRLW 739
Score = 224 (83.9 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 66/229 (28%), Positives = 103/229 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ V +FSPD L S S D TVRLW L T T + GH V +S G +
Sbjct: 542 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 601
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSG + W +P +GH + ++ H N+ + S D R+W
Sbjct: 602 VSGGHDRVARLWATDHYQPL-RIFAGH---LADVNCTRYHPNS--NYVATGSADRTVRLW 655
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
DV CV +GH + + + +G + TG+ D + +W+ G ++ ELKGH V
Sbjct: 656 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV 715
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG--NAPE 330
SL S + L +G+ D+T + + + + + + + G N PE
Sbjct: 716 CSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPE 764
Score = 191 (72.3 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 58/221 (26%), Positives = 102/221 (46%)
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIR 275
S D RI D + L GH+ V + D + + S+D T+++W +
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 580
Query: 276 ELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPE 330
KGH + V S Y +G D + +++ P + L N + +
Sbjct: 581 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNS 640
Query: 331 RLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
V+ GS D T+ LW+ ++ TGH+ ++ + FSP+G+++A+ + D + LW+
Sbjct: 641 NYVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
G V +GH V + +S D +L SGS D+T+++WD
Sbjct: 700 GHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 185 (70.2 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 48/172 (27%), Positives = 76/172 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH V FSP G SG D RLW + P+ GH V C +
Sbjct: 578 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYH 637
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ ++ +GS ++ WD G +GHK I +++ P N R + + D
Sbjct: 638 PNSNYVATGSADRTVRLWDVLNGN-CVRIFTGHKGPIHSLTFSP---NG--RFLATGATD 691
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQ 270
G +WD+ V L GHT V +++ DG ++ +GS D T+++W+ +
Sbjct: 692 GRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
Score = 178 (67.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+I G D T++VW T KL R +K + L+L + + + + ++ E
Sbjct: 485 LIAGGFADSTVRVWSVTPKKL-RSVKQ----ASDLSLIDKES--DDVLERIMDEKTASE- 536
Query: 313 MKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTG---HQQLVNH 365
K + G + P+R L+S S+D T+ LW S Q T + G H V
Sbjct: 537 -LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW----SLQTFTCLVGYKGHNYPVWD 591
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDST 425
FSP G + S D+ +LW + + +F GH+ V + +S + +GS D T
Sbjct: 592 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRT 651
Query: 426 LKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD-RVLKLW 471
+++WD+ + GH + ++ +SP+G +A+G D RVL LW
Sbjct: 652 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL-LW 697
Score = 166 (63.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 68/262 (25%), Positives = 108/262 (41%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG 172
SV + D + S D R+ D T + + GH V ++S D +L+S S+ G
Sbjct: 507 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDG 566
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
++ W QT L G+K + W+ + FVS D AR+W +
Sbjct: 567 TVRLWSLQTF----TCLVGYKGHNYPV-WD-TQFSPYGYYFVSGGHDRVARLWATDHYQP 620
Query: 233 VICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST 291
+ +GH V C ++ + TGS D T+++W+ G +R GH ++SL S
Sbjct: 621 LRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 292 EYA-LRTGAFDHTGKQYSSPEEMKKAALERYN----KIKGNAP-ERLVSGSDDFTMFLWE 345
L TGA D + + L+ + ++ + E L SGS D T+ LW+
Sbjct: 681 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Query: 346 PA-----VSKQPKTRMTGHQQL 362
+ T TGH L
Sbjct: 741 AVKAFEDLETDDFTTATGHINL 762
Score = 59 (25.8 bits), Expect = 8.9e-19, Sum P(2) = 8.9e-19
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRP---VNRCSATIAGHTEAVLSVAFSPDGR 121
+PL + K+ +K++++ + V R+ P + C T + + +V + D
Sbjct: 428 IPLPELKDSDKL--DKIMNMKETTKRV-RLGPDCLPSICFYTFLNAYQGLTAVDVTDDSS 484
Query: 122 QLASGSGDTTVRLWDL 137
+A G D+TVR+W +
Sbjct: 485 LIAGGFADSTVRVWSV 500
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 177 (67.4 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 42/121 (34%), Positives = 62/121 (51%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA---VFRGHVGPVYQISWSA 412
+ GH+ V +V ++P G +AS DKSI+LW G +V + GH V +SWS
Sbjct: 9 LEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVSWSN 68
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQ--DLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 470
R L S S D T +W + + L GH +EV A WSP G +A+ +D+ + +
Sbjct: 69 CGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWI 128
Query: 471 W 471
W
Sbjct: 129 W 129
Score = 163 (62.4 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 52/170 (30%), Positives = 79/170 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT---GHKNWVLCIAWSA 160
+ GH + V +VA++P G LAS GD ++RLW L + + K GH+ V ++WS
Sbjct: 9 LEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVSWSN 68
Query: 161 DGKHLVSGSKAGELQCWDPQTGK-PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA-SK 218
G++L S S G W Q S L GH+ + W +P RF++ S+
Sbjct: 69 CGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGW------SPSGRFLATCSR 122
Query: 219 DGDARIWDVSLRK---CVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIK 264
D IW+V + C + H+ V V W D + + S D TI+
Sbjct: 123 DKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIR 172
Score = 151 (58.2 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF--VAVFRGHVGPVYQISWSAD 413
+ GHQ+ V V +S G+++AS+SFD + +W F A GH V WS
Sbjct: 54 LDGHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWSPS 113
Query: 414 SRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 470
R L + S+D T+ +W++ + H+ +V V W PD +++AS D ++
Sbjct: 114 GRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIRF 173
Query: 471 W 471
+
Sbjct: 174 F 174
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 57/215 (26%), Positives = 85/215 (39%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGHKNWVLCIA 157
AT+ GH V + +SP GR LA+ S D TV +W++ + F+C T H V +
Sbjct: 96 ATLEGHENEVKACGWSPSGRFLATCSRDKTVWIWEVG-EDEEFECASVQTCHSQDVKKVL 154
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGK-PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
W D L S S ++ + + L H + G+S+ P P + S
Sbjct: 155 WHPDRDELASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGP----GPEPQLASC 210
Query: 217 SKDGDARIWDVS--LRKCVIC--LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQG 271
+ DG +W R +C L H V V W G + T D ++V+ G
Sbjct: 211 AADGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVFVKDGG 270
Query: 272 KLIREL-----KGHGHWVNSLALSTEYALRTGAFD 301
L + H VNS++ S L A D
Sbjct: 271 DCSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAGD 305
Score = 130 (50.8 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 46/158 (29%), Positives = 72/158 (45%)
Query: 329 PER--LVSGSDDFTM-FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ-WVASASFDKSI 384
P+R L S S D T+ F E Q + H V + F P + +AS + D S+
Sbjct: 157 PDRDELASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGPGPEPQLASCAADGSV 216
Query: 385 KLWNGTTG-----KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR-----TQ 434
+W GT G + H PVY +SW L + D+ ++V+ ++ +
Sbjct: 217 YVW-GTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVF-VKDGGDCSW 274
Query: 435 KLKQDLP-GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+L L H+ +V +V WSP G +AS G D ++LW
Sbjct: 275 RLGCTLTQAHSQDVNSVSWSPSGGLLASAGDDGYVRLW 312
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 49/188 (26%), Positives = 77/188 (40%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT---GHKNWVLCIA 157
S + GH V V++S GR LAS S D T +W T C GH+N V
Sbjct: 51 SVLLDGHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDDT-FESCATLEGHENEVKACG 109
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKP--SGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
WS G+ L + S+ + W+ + + + H + + + W P S
Sbjct: 110 WSPSGRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDR-----DELAS 164
Query: 216 ASKDGDARIW--DVSLRKCVICLSGHTLAVTCVKWG-G-DGVIYTGSQDCTIKVWETTQG 271
AS D R + +V +C L H V + +G G + + + + D ++ VW T
Sbjct: 165 ASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGD 224
Query: 272 KLIRELKG 279
+ EL G
Sbjct: 225 RRSWELCG 232
Score = 65 (27.9 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 26/116 (22%), Positives = 51/116 (43%)
Query: 326 GNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTG----HQQLVNHVYFSPDGQWVASASF 380
G PE +L S + D ++++W ++ + G H + V V + ++A+A
Sbjct: 200 GPGPEPQLASCAADGSVYVWGTKGDRR-SWELCGTLERHPRPVYDVSWCRTRGFLATACG 258
Query: 381 DKSIKLWNGTTGKF-----VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
D +++++ G + + H V +SWS LL S D +++W I
Sbjct: 259 DNAVRVFVKDGGDCSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAGDDGYVRLWQI 314
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 173 (66.0 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 45/141 (31%), Positives = 72/141 (51%)
Query: 332 LVSGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
L +GS D T LW A+ + Q +GH++ + V FSP Q +A+AS D +IKLW
Sbjct: 494 LATGSQDRTAKLW--ALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 551
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+ F GH V ++++ + LLS D LK+W I+ + + L H D+V+ +
Sbjct: 552 DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKVWGL 611
Query: 451 DWSPDGEKVASGGKDRVLKLW 471
S ++ +G D + LW
Sbjct: 612 HCSRLDDRALTGASDSRVVLW 632
Score = 162 (62.1 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 332 LVSGSDDFTMFLW---EPAVSK-----------QPKTRMTGHQQLVNHVYFSPDGQWVAS 377
LV+GS D T+ LW E +SK Q + H + +N V +P+ + +A+
Sbjct: 437 LVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAPNDKLLAT 496
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLK 437
S D++ KLW + + F GH ++ + +S ++L + S D T+K+W ++
Sbjct: 497 GSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL 556
Query: 438 QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ GH V V + G ++ S G D +LKLW
Sbjct: 557 KTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW 590
Score = 149 (57.5 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 56/207 (27%), Positives = 98/207 (47%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC---- 146
VF ++ + C + GHT+ VL++ GR AS + D ++R+W +N + C
Sbjct: 361 VFDLQ-TSACQI-LHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEV-ACVAQG 417
Query: 147 TGHKNWVLCIAWSA-DGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPV 204
+GH + V I S LV+GS+ ++ W P+ G G ++ + +
Sbjct: 418 SGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHC 477
Query: 205 H---LN----APCRRFVSA-SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGG-DGV 253
H +N AP + ++ S+D A++W +L +C + SGH + CV++ D V
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLW--ALPRCQLLGTFSGHRRGLWCVQFSPMDQV 535
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGH 280
+ T S D TIK+W ++ +GH
Sbjct: 536 LATASADGTIKLWALQDFSCLKTFEGH 562
Score = 140 (54.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+ AT H + + SVA +P+ + LA+GS D T +LW L + +GH+ + C+ +
Sbjct: 470 QAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQF 529
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S + L + S G ++ W Q GH + +++ V + +S+
Sbjct: 530 SPMDQVLATASADGTIKLWALQDFSCL-KTFEGHDASVLKVAF--VSRGT---QLLSSGS 583
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVW-ETTQGKLIRE 276
DG ++W + +CV L H V + D TG+ D + +W + T+ + E
Sbjct: 584 DGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAEQAEE 643
Score = 138 (53.6 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 31/115 (26%), Positives = 60/115 (52%)
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD-SRLL 417
H V + F P +A+ D ++++W+ FRG G V+ +++ D +RLL
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 418 L-SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L S + D++++VW ++ + L H V ++ +S DG + S G+D++ +W
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIW 222
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 63/257 (24%), Positives = 108/257 (42%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL---- 154
C A +GHT +V ++ S L +GS D TV+LW L + + K TGH+ +
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPL-PEALLSKGTGHEGGPVFLQA 471
Query: 155 -----C-------IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWE 202
C +A + + K L +GS+ + W + G SGH++ + + +
Sbjct: 472 QATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGT-FSGHRRGLWCVQFS 530
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDC 261
P+ + +AS DG ++W + C+ GH +V V + G + + D
Sbjct: 531 PMD-----QVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDG 585
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALST--EYALRTGAFDHT---GKQYSSPEEMKKA 316
+K+W + +R L H V L S + AL TGA D K + E+ ++
Sbjct: 586 LLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRAL-TGASDSRVVLWKDVTEAEQAEEQ 644
Query: 317 ALERYNKIKGNAPERLV 333
A +K + L+
Sbjct: 645 AKREEQVVKQQELDNLL 661
Score = 134 (52.2 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 48/204 (23%), Positives = 92/204 (45%)
Query: 93 RIRPVNRCSAT--IAGHTEAVLSVAFSPDGRQLA--SGSGDTTVRLWDLNTQTPMFKCTG 148
R+ V RC T G V VAF PD +L S + DT++R+W L ++ + T
Sbjct: 134 RVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTA 193
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN-PLSGHKKWITGISWEP---V 204
H + V + +SADG ++S + WD ++ + + P+ + + EP +
Sbjct: 194 HYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPEL 253
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVIC---LSGHTLAVT-CVKWGGDGVIYTGSQD 260
+ + F++A G R+W+ + +CV L G +T C G++ + + D
Sbjct: 254 GVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTAD 313
Query: 261 CTIKVWETTQGKLIRELKGHGHWV 284
+ +++ +L ++ G+ V
Sbjct: 314 HNLLLYDARSLRLRKQFAGYSEEV 337
Score = 131 (51.2 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 48/166 (28%), Positives = 75/166 (45%)
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW-SADGKHLVSGSKAGELQCWDPQT 181
L S + D + L+D + + G+ VL + + + H+V S + L+ +D QT
Sbjct: 307 LLSVTADHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQT 366
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL---SG 238
+ L GH + + V R F S +KD R+W ++ V C+ SG
Sbjct: 367 S--ACQILHGHTDIVLALD---VFRKG--RLFASCAKDQSIRVWRMNKSGEVACVAQGSG 419
Query: 239 HTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
HT +V C + + TGSQDCT+K+W + L KG GH
Sbjct: 420 HTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLS---KGTGH 462
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 40/153 (26%), Positives = 71/153 (46%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
+K+L+ Q + ++ + RC T +GH + V FSP + LA+ S D T++LW
Sbjct: 491 DKLLATGSQDRTA-KLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWA 549
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L + + GH VL +A+ + G L+S G L+ W + + L H+ +
Sbjct: 550 LQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNE-CVRTLDAHEDKV 608
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIW-DVS 228
G+ H + R ++ + D +W DV+
Sbjct: 609 WGL-----HCSRLDDRALTGASDSRVVLWKDVT 636
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 244 (91.0 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 69/274 (25%), Positives = 124/274 (45%)
Query: 215 SASKDGDARIWDV---SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQ 270
S D + +W+V + V L GH + + W D IYT D +I VW++ +
Sbjct: 79 SGGSDKEIFLWNVYGECINYSV--LKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNK 136
Query: 271 GKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG-- 326
G+LI+ ++ H VNS A + +G+ D + + + + + + +
Sbjct: 137 GELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVC 196
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+A ++L++G D + +W+ + P + HQ + S DG ++ S S D S
Sbjct: 197 FSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSC 256
Query: 385 KLWN----GTTGKFVAVFRGHVGP----VYQISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
K+W+ + + F G + + SWS D R + GS D + +WD T++L
Sbjct: 257 KIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQL 316
Query: 437 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 470
+ LPGH+ V V + P+ +AS D+ + L
Sbjct: 317 QYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYL 350
Score = 210 (79.0 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 83/301 (27%), Positives = 126/301 (41%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
+ GH + S F+ G LASG D + LW++ + + GHK +L + WS D
Sbjct: 58 LIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDS 117
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + + WD G+ + H + P P S S D A
Sbjct: 118 NEIYTACTDKSIGVWDSNKGELIKR-IREHSGVVNSCC--PARRGPPL--VASGSDDRSA 172
Query: 223 RIWDVSLRKCVICLSGHTLAVT--CVKWGGDGVIYTGSQDCTIKVWET-TQGKLIRELKG 279
RI+D K L H VT C D +I TG D I+VW+ Q + L
Sbjct: 173 RIFDTR-SKGSTHLFQHKYPVTSVCFSDASDQLI-TGGIDNVIRVWDIRNQEDPLYTLAS 230
Query: 280 HGHWVNSLALSTEYA-LRTGAFDHTGK-----QYSSPEEMKKA---ALERYNK--IKGNA 328
H + S ++S + A L + + D++ K Y+ P K A + K IK +
Sbjct: 231 HQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSW 290
Query: 329 P---ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
R+ GS D +++W+ +KQ + + GH VN V F P+ +AS S DK+I
Sbjct: 291 SIDGRRIGCGSSDRQVYIWDTN-TKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIY 349
Query: 386 L 386
L
Sbjct: 350 L 350
Score = 169 (64.5 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 73/338 (21%), Positives = 142/338 (42%)
Query: 112 LSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKA 171
L V S GR++ G+ + T +L + P+ + GHK + +++ G L SG
Sbjct: 30 LQVVSSGGGREIILGT-ERTSKL-----EHPIMQLIGHKGEIYSCKFNSYGTALASGGSD 83
Query: 172 GELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK 231
E+ W+ + + L GHK I + W + +A D +WD + +
Sbjct: 84 KEIFLWNVYGECINYSVLKGHKGTILELHW-----STDSNEIYTACTDKSIGVWDSNKGE 138
Query: 232 CVICLSGHTLAVT--CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+ + H+ V C G ++ +GS D + ++++T + K L H + V S+
Sbjct: 139 LIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDT-RSKGSTHLFQHKYPVTSVCF 197
Query: 290 S-TEYALRTGAFDHTGKQYS--SPEEMKKAALERYNKIKGNAPER----LVSGSDDFTMF 342
S L TG D+ + + + E+ + I + + L+S S D +
Sbjct: 198 SDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCK 257
Query: 343 LWEPAVSKQPKTRM---TGHQQ-----LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
+W+ P + G Q L+ + S DG+ + S D+ + +W+ T +
Sbjct: 258 IWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSW-SIDGRRIGCGSSDRQVYIWDTNTKQL 316
Query: 395 VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
GH G V ++++ + ++ S S D T+ + +I+
Sbjct: 317 QYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEIK 354
Score = 162 (62.1 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 68/258 (26%), Positives = 110/258 (42%)
Query: 233 VICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRE--LKGHGHWVNSLAL 289
++ L GH + K+ G + +G D I +W G+ I LKGH + L
Sbjct: 55 IMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNV-YGECINYSVLKGHKGTILELHW 113
Query: 290 STEY-ALRTGAFDHT-GKQYSSPEEMKKAALERYNKIKGNAPER----LV-SGSDDFTMF 342
ST+ + T D + G S+ E+ K E + P R LV SGSDD +
Sbjct: 114 STDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSAR 173
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF-VAVFRGH 401
+++ SK T + H+ V V FS + + D I++W+ + + H
Sbjct: 174 IFDTR-SKG-STHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASH 231
Query: 402 VGPVYQISWSADSRLLLSGSKDSTLKVWDIR-----TQKLK--QDLPGHADE-VFAVDWS 453
+ S S D LLS S D++ K+WDIR + +K + ++ + WS
Sbjct: 232 QDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWS 291
Query: 454 PDGEKVASGGKDRVLKLW 471
DG ++ G DR + +W
Sbjct: 292 IDGRRIGCGSSDRQVYIW 309
Score = 160 (61.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 47/170 (27%), Positives = 77/170 (45%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDL-NTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H V SV FS QL +G D +R+WD+ N + P++ H++ + + S DG +L
Sbjct: 188 HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYL 247
Query: 166 VSGSKAGELQCWDPQTGKPSGNPL-------SGHKKWITGISWEPVHLNAPCRRFVSASK 218
+S S + WD + P + + +K + SW ++ RR S
Sbjct: 248 LSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWS---IDG--RRIGCGSS 302
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWE 267
D IWD + ++ CL GH+ V V + + +I + S D TI + E
Sbjct: 303 DRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGE 352
Score = 155 (59.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE- 311
V+ GS D T + + +++ G G + L TE RT +H Q +
Sbjct: 12 VLVNGSNDTTPNKKQKNELQVVSS--GGGR---EIILGTE---RTSKLEHPIMQLIGHKG 63
Query: 312 EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD 371
E+ Y G A L SG D +FLW + + GH+ + +++S D
Sbjct: 64 EIYSCKFNSY----GTA---LASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTD 116
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSR-LLLSGSKDSTLKVWD 430
+ +A DKSI +W+ G+ + R H G V + L+ SGS D + +++D
Sbjct: 117 SNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFD 176
Query: 431 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
R+ K L H V +V +S +++ +GG D V+++W
Sbjct: 177 TRS-KGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVW 216
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFK----CTGHKNW----VL 154
T+A H + + S + S DG L S S D + ++WD+ P + G +N ++
Sbjct: 227 TLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLI 286
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+WS DG+ + GS ++ WD T K L GH + +++ P N P
Sbjct: 287 KSSWSIDGRRIGCGSSDRQVYIWDTNT-KQLQYCLPGHSGTVNEVTFHP---NEPIIASC 342
Query: 215 SASK 218
S+ K
Sbjct: 343 SSDK 346
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 249 (92.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 89/336 (26%), Positives = 155/336 (46%)
Query: 146 CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C H +WV + + DG +++G+ + W+ + GK + GH + G++W +
Sbjct: 107 CLLHDDWVSAVQ-AKDG-WILTGTYDNTVNLWNTK-GKHKLT-IPGHVAAVKGVAW--IS 160
Query: 206 LNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWG-GDGVIYTGSQD 260
LN F SAS D IW+ ++ +CV GH V C+ + +GS D
Sbjct: 161 LNEQTGVFASASHDQTIMIWEWNMTTNTAECVHVCKGHERGVGCIAVNPAKTQMASGSMD 220
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+K+W T ++ KG L + +RT G + E
Sbjct: 221 TMLKIWSTE----LQADKGEPSATKKAKLEQDN-VRTPVVTLAGHR------------EF 263
Query: 321 YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+ ++ + + S D T+ LW+ ++ KT TG++ + Y SP + +AS
Sbjct: 264 VSGVQWIDNTTIATCSWDHTIKLWDLSMGGI-KTEFTGNKSFFDLSY-SPLNGMIITASP 321
Query: 381 DKSIKLWNGTT--GKFVA-VFRGHVGPVYQISWSADSR-LLLSGSKDSTLKVWDIRTQKL 436
DK+++L++ + G FV + GH V WS + L +SG+ D+ +K+WD R+ K
Sbjct: 322 DKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTNEYLFVSGAYDNRVKLWDYRSPKA 381
Query: 437 KQ-DLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+L GH D+V A DWS + + + SGG D ++++
Sbjct: 382 PIFELIGHEDKVLACDWS-NPKYILSGGSDNAVRVF 416
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 47/169 (27%), Positives = 80/169 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+AGH E V V + D +A+ S D T++LWDL+ + TG+K++ +++S
Sbjct: 256 TLAGHREFVSGVQWI-DNTTIATCSWDHTIKLWDLSMGGIKTEFTGNKSF-FDLSYSPLN 313
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+++ S L+ +DP++ G N GH +W+ W + FVS + D
Sbjct: 314 GMIITASPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTNEYL----FVSGAYDN 369
Query: 221 DARIWDVSLRKCVIC-LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET 268
++WD K I L GH V W I +G D ++V+++
Sbjct: 370 RVKLWDYRSPKAPIFELIGHEDKVLACDWSNPKYILSGGSDNAVRVFKS 418
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 42/149 (28%), Positives = 70/149 (46%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
ER +S D + E + QP+ + H V+ V + DG W+ + ++D ++ LWN
Sbjct: 82 ERDISFEDTIELEYVERYPAPQPQDCLL-HDDWVSAVQ-AKDG-WILTGTYDNTVNLWN- 137
Query: 390 TTGKFVAVFRGHVGPVYQISW---SADSRLLLSGSKDSTLKVWD----IRTQKLKQDLPG 442
T GK GHV V ++W + + + S S D T+ +W+ T + G
Sbjct: 138 TKGKHKLTIPGHVAAVKGVAWISLNEQTGVFASASHDQTIMIWEWNMTTNTAECVHVCKG 197
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H V + +P ++ASG D +LK+W
Sbjct: 198 HERGVGCIAVNPAKTQMASGSMDTMLKIW 226
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 71/294 (24%), Positives = 116/294 (39%)
Query: 103 TIAGHTEAVLSVAFSPDGRQ---LASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLC 155
TI GH AV VA+ Q AS S D T+ +W+ N T +C GH+ V C
Sbjct: 145 TIPGHVAAVKGVAWISLNEQTGVFASASHDQTIMIWEWNMTTNTAECVHVCKGHERGVGC 204
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWE-PVHLNAPCRRFV 214
IA + + SGS L+ W + G P + K + + PV A R FV
Sbjct: 205 IAVNPAKTQMASGSMDTMLKIWSTELQADKGEPSATKKAKLEQDNVRTPVVTLAGHREFV 264
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
S + W + C HT+ + + GG +TG++ + G +I
Sbjct: 265 SGVQ------W-IDNTTIATCSWDHTIKLWDLSMGGIKTEFTGNKSFFDLSYSPLNGMII 317
Query: 275 RELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERL-V 333
+L L Y R+ + Y + + R++ E L V
Sbjct: 318 TASPD-----KNLRL---YDPRSKHGNFVKNTYLGHSQWVQTC--RWSTTN----EYLFV 363
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
SG+ D + LW+ K P + GH+ V +S + +++ S D +++++
Sbjct: 364 SGAYDNRVKLWDYRSPKAPIFELIGHEDKVLACDWS-NPKYILSGGSDNAVRVF 416
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 78/343 (22%), Positives = 136/343 (39%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH-- 164
H + V +V + DG + +G+ D TV LW+ + + GH V +AW + +
Sbjct: 110 HDDWVSAVQ-AKDG-WILTGTYDNTVNLWNTKGKHKL-TIPGHVAAVKGVAWISLNEQTG 166
Query: 165 -LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
S S + W+ + + K G+ + +N + S S D +
Sbjct: 167 VFASASHDQTIMIWEWNMTTNTAECVHVCKGHERGVGC--IAVNPAKTQMASGSMDTMLK 224
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
IW L+ G A K D V T + L GH +
Sbjct: 225 IWSTELQAD----KGEPSATKKAKLEQDNV-------------RTP----VVTLAGHREF 263
Query: 284 VNSLALSTEYALRTGAFDHTGKQYS-SPEEMK------KAALE-RYNKIKGNAPERLVSG 335
V+ + + T ++DHT K + S +K K+ + Y+ + G +++
Sbjct: 264 VSGVQWIDNTTIATCSWDHTIKLWDLSMGGIKTEFTGNKSFFDLSYSPLNG----MIITA 319
Query: 336 SDDFTMFLWEPAVSKQP---KTRMTGHQQLVNHVYFSPDGQWV-ASASFDKSIKLWNGTT 391
S D + L++P SK K GH Q V +S +++ S ++D +KLW+ +
Sbjct: 320 SPDKNLRLYDPR-SKHGNFVKNTYLGHSQWVQTCRWSTTNEYLFVSGAYDNRVKLWDYRS 378
Query: 392 GKFVAVFR--GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
K +F GH V WS + + +LSG D+ ++V+ R
Sbjct: 379 PK-APIFELIGHEDKVLACDWS-NPKYILSGGSDNAVRVFKSR 419
>UNIPROTKB|O75083 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=TAS] [GO:0002576 "platelet
degranulation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0030168 "platelet activation"
evidence=TAS] Reactome:REACT_604 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005576
GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0002576 GO:GO:0007605 EMBL:AC005674
HOVERGEN:HBG000780 CTD:9948 EMBL:AF020056 EMBL:AF020260
EMBL:AB010427 EMBL:AK291614 EMBL:AC093664 EMBL:BC000201
EMBL:BC002489 EMBL:BC030541 EMBL:AL050108 EMBL:AL110208
IPI:IPI00746165 IPI:IPI00903292 PIR:T13152 RefSeq:NP_005103.2
RefSeq:NP_059830.1 UniGene:Hs.128548 ProteinModelPortal:O75083
SMR:O75083 IntAct:O75083 STRING:O75083 PhosphoSite:O75083
OGP:O75083 REPRODUCTION-2DPAGE:IPI00746165
REPRODUCTION-2DPAGE:O75083 UCD-2DPAGE:O75083 PaxDb:O75083
PRIDE:O75083 Ensembl:ENST00000382451 Ensembl:ENST00000382452
Ensembl:ENST00000499869 Ensembl:ENST00000502702 GeneID:9948
KEGG:hsa:9948 UCSC:uc021xlv.1 UCSC:uc021xlw.1 GeneCards:GC04M010075
HGNC:HGNC:12754 HPA:CAB020804 MIM:604734 neXtProt:NX_O75083
PharmGKB:PA37358 OMA:LKDQKKC ChiTaRS:WDR1 GenomeRNAi:9948
NextBio:37534 ArrayExpress:O75083 Bgee:O75083 CleanEx:HS_WDR1
Genevestigator:O75083 GermOnline:ENSG00000071127 Uniprot:O75083
Length = 606
Score = 253 (94.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 101/404 (25%), Positives = 174/404 (43%)
Query: 90 AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG- 148
A F P + TI H+ V V FSPDG + A+ S D + ++D T + G
Sbjct: 171 AAFFEGPPFKFKFTIGDHSRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGS 230
Query: 149 --HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGK-----PSGNPLSGHKKWITGISW 201
H + I+WS D HL+S S + WD P G+ + + G W
Sbjct: 231 KAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQ---LGCLW 287
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSL-RKCVICLSGHTLAVTCV---KWGGDGVIYTG 257
+ HL +S S G D + K + + GH+ ++ C+ K GG IY+G
Sbjct: 288 QKDHL-------LSVSLSGYINYLDRNNPSKPLHVIKGHSKSIQCLTVHKNGGKSYIYSG 340
Query: 258 SQDCTIKVWETTQGKLIREL-KGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKA 316
S D I W++ G+ KGH + V+ + + L + + D T + Y+S ++
Sbjct: 341 SHDGHINYWDSETGENDSFAGKGHTNQVSRMTVDESGQLISCSMDDTVR-YTSLM-LRDY 398
Query: 317 ALERYNKIKGNAPERLVSGSDDFTMF--LWEPAVSKQPKTRMT----GHQQLVNHVYFSP 370
+ + K+ P+ + G + + + + + K + + G++ V V+ P
Sbjct: 399 SGQGVVKLDVQ-PKCVAVGPGGYAVVVCIGQIVLLKDQRKCFSIDNPGYEPEVVAVH--P 455
Query: 371 DGQWVASASFDKSIKLWN--GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKV 428
G VA D +++L++ GTT K GPV +++S D L + V
Sbjct: 456 GGDTVAIGGVDGNVRLYSILGTTLKDEGKLLEAKGPVTDVAYSHDGAFLAVCDASKVVTV 515
Query: 429 WDIRTQKLKQDL-PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ + + ++ GH ++ + WSPD E ASGG D ++ +W
Sbjct: 516 FSVADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVW 559
Score = 218 (81.8 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 73/237 (30%), Positives = 107/237 (45%)
Query: 239 HTLAVTCVKWGGDGVIYTGSQDCT--IKVWETTQGK-LIR-ELKGHGHWVNSLALSTEYA 294
H V K+ G Y S D + +++W+TTQ + L++ E + + +A TE +
Sbjct: 57 HAHQVVVAKYAPSG-FYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW-TEDS 114
Query: 295 LRTGAFDHTGKQYSS----PEEMKKAALERYNK------IKGNAPERLVSGSDDFTMFLW 344
R +++ + + +NK IK + P RL +GSDD +
Sbjct: 115 KRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFF 174
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG---H 401
E K K + H + VN V FSPDG A+AS D I +++G TG+ V G H
Sbjct: 175 EGPPFKF-KFTIGDHSRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGSKAH 233
Query: 402 VGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP-GHA--DEVFAVDWSPD 455
G +Y ISWS DS LLS S D T K+WD+ + P G D+ W D
Sbjct: 234 DGGIYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKD 290
Score = 137 (53.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 50/194 (25%), Positives = 79/194 (40%)
Query: 104 IAGHTEAVLSVAFSPDGR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I GH + + SV +LA+GS D ++ F H +V C+ +S DG
Sbjct: 142 ITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFTIGDHSRFVNCVRFSPDG 201
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSG---HKKWITGISWEPVHLNAPCRRFVSASKD 219
+ S G++ +D +TG+ L G H I ISW P +SAS D
Sbjct: 202 NRFATASADGQIYIYDGKTGEKVC-ALGGSKAHDGGIYAISWSP-----DSTHLLSASGD 255
Query: 220 GDARIWDVSLRKCVICLS-GHTLA---VTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
++IWDVS+ V G T+ + C+ W D ++ + K +
Sbjct: 256 KTSKIWDVSVNSVVSTFPMGSTVLDQQLGCL-WQKDHLLSVSLSGYINYLDRNNPSKPLH 314
Query: 276 ELKGHGHWVNSLAL 289
+KGH + L +
Sbjct: 315 VIKGHSKSIQCLTV 328
Score = 120 (47.3 bits), Expect = 0.00058, P = 0.00058
Identities = 47/204 (23%), Positives = 89/204 (43%)
Query: 213 FVSASKD--GDARIWDVSLRKCVICLSGHTLA--VTCVKWGGDG----VIYTGSQDC-TI 263
F AS D G RIWD + ++ ++ A + + W D V+ G + +
Sbjct: 71 FYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAV 130
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAAL--- 318
+W++ G + E+ GH +NS+ + S Y L TG+ D+ + P K +
Sbjct: 131 FLWDS--GSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFTIGDH 188
Query: 319 ERYNKIKGNAPE--RLVSGSDDFTMFLWEPAVSKQPKTR--MTGHQQLVNHVYFSPDGQW 374
R+ +P+ R + S D +++++ ++ H + + +SPD
Sbjct: 189 SRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTH 248
Query: 375 VASASFDKSIKLWNGTTGKFVAVF 398
+ SAS DK+ K+W+ + V+ F
Sbjct: 249 LLSASGDKTSKIWDVSVNSVVSTF 272
Score = 87 (35.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 27/112 (24%), Positives = 48/112 (42%)
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA-VFRGHVGPVYQISWSADSRLLLSGS 421
V V +S DG ++A K + +++ G VF GH + ++WS D+ SG
Sbjct: 492 VTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHHAKIVCLAWSPDNEHFASGG 551
Query: 422 KDSTLKVWDIRTQKLKQDLP-GHA-DEVFAVDWSPDGEKVASGGKDRVLKLW 471
D + VW + + + + H V ++ W D + + D +K W
Sbjct: 552 MDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWL-DEHTLVTTSHDASVKEW 602
Score = 74 (31.1 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF-VAVFRGH-VGPVYQISWSADSR 415
GH + + +SPD + AS D + +W + + V + H + V ++W D
Sbjct: 530 GHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAW-LDEH 588
Query: 416 LLLSGSKDSTLKVWDI 431
L++ S D+++K W I
Sbjct: 589 TLVTTSHDASVKEWTI 604
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 252 (93.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 68/212 (32%), Positives = 109/212 (51%)
Query: 102 ATIAGHT-EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
A I GH V VAF P GR LA+ D++ RLWDL +T + GH V C+++ +
Sbjct: 346 ADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHS 405
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG LV+G + WD +TG+ L GH + G+ + P + + S+D
Sbjct: 406 DGSVLVTGGLDAFGRVWDLRTGRCIMF-LEGHLGAVFGVDFSPNGFH-----IATGSQDN 459
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVWETTQGKLIRELK 278
+IWD+ R+ V + HT ++ VK+ + + T S D T K+W + ++ L+
Sbjct: 460 TCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQ 519
Query: 279 GHGHWVNS--LALSTEYALRTGAFDHTGKQYS 308
GH + V S +A +++Y + T +FD T K +S
Sbjct: 520 GHDNKVISVDIAPNSQY-IATTSFDRTFKLWS 550
Score = 230 (86.0 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 65/202 (32%), Positives = 107/202 (52%)
Query: 284 VNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--P------ERLV 333
V+S A S + +L T ++ K +S P+ E+K+ + + G A P E +V
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVV 323
Query: 334 ---SGSDDFTMFLWEPAVSKQPKTRMTGHQ-QLVNHVYFSPDGQWVASASFDKSIKLWNG 389
SG D + LW +++ +TGH V+ V F P G+++A+A +D S +LW+
Sbjct: 324 AMASGGHDGAVKLWG-FNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDL 382
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
V GH PV+ +S+ +D +L++G D+ +VWD+RT + L GH VF
Sbjct: 383 EQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFG 442
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
VD+SP+G +A+G +D K+W
Sbjct: 443 VDFSPNGFHIATGSQDNTCKIW 464
Score = 206 (77.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 71/260 (27%), Positives = 116/260 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQ-------LASGSGDTTVRLWDLNTQTPMFKCTGHK-NWVL 154
T+ GH V VA P + +ASG D V+LW N + + TGH + V
Sbjct: 298 TLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVS 357
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+A+ G+ L + + WD + K GH K + +S+ H + V
Sbjct: 358 KVAFHPSGRFLATACYDSSWRLWDLEQ-KTEVLHQEGHAKPVHCLSY---HSDGSV--LV 411
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKL 273
+ D R+WD+ +C++ L GH AV V + +G I TGSQD T K+W+ + +
Sbjct: 412 TGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQP 471
Query: 274 IRELKGHGHWVNSLALSTEYA--LRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGN--A 328
+ + H + ++ + E L T ++D T K +S+ L+ + NK+ A
Sbjct: 472 VYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIA 531
Query: 329 P--ERLVSGSDDFTMFLWEP 346
P + + + S D T LW P
Sbjct: 532 PNSQYIATTSFDRTFKLWSP 551
Score = 202 (76.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 69/305 (22%), Positives = 135/305 (44%)
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L + P+ G V A+S D L++ S +G + W + L GH ++
Sbjct: 248 LQSLAPLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELK-QTLRGHASYV 306
Query: 197 TGISWEPVHLNAPCRRFV---SASKDGDARIWDVSLRKCVICLSGHTL-AVTCVKWGGDG 252
G++ P + A V S DG ++W + + + ++GH V+ V + G
Sbjct: 307 GGVALRP-GVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSG 365
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSP 310
+ T D + ++W+ Q + +GH V+ L+ ++ + L TG D G+ +
Sbjct: 366 RFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLR 425
Query: 311 EEMKKAALERY-NKIKGN--APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNH 365
LE + + G +P + +GS D T +W+ +QP + H L++
Sbjct: 426 TGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLR-RRQPVYTIPAHTNLISD 484
Query: 366 VYFSPD-GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
V + + G ++ + S+D + K+W+ T + + +GH V + + +S+ + + S D
Sbjct: 485 VKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDR 544
Query: 425 TLKVW 429
T K+W
Sbjct: 545 TFKLW 549
Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 67/274 (24%), Positives = 124/274 (45%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAV------TCVKWGGDGVIY--TGSQDCTIKV 265
+++S G ++W V + L GH V VK + V+ +G D +K+
Sbjct: 277 LTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKL 336
Query: 266 WETTQGKLIRELKGH-GHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNK 323
W + I ++ GH H V+ +A L T +D + + + ++ + E + K
Sbjct: 337 WGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAK 396
Query: 324 ----IKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
+ ++ LV+G D +W+ + + GH V V FSP+G +A+
Sbjct: 397 PVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMF-LEGHLGAVFGVDFSPNGFHIATG 455
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD-SRLLLSGSKDSTLKVWDIRTQKLK 437
S D + K+W+ + V H + + + + L++ S DST K+W +T +
Sbjct: 456 SQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPL 515
Query: 438 QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ L GH ++V +VD +P+ + +A+ DR KLW
Sbjct: 516 KTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 155 (59.6 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH AV V FSP+G +A+GS D T ++WDL + P++ H
Sbjct: 421 VWDLR-TGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHT 479
Query: 151 NWVLCIAWSAD-GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
N + + + + G LV+ S + W +T +P L GH + + P
Sbjct: 480 NLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPL-KTLQGHDNKVISVDIAP 532
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 33/79 (41%), Positives = 40/79 (50%)
Query: 400 GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP----D 455
G PV ++S DS LLL+ S K+W + +LKQ L GHA V V P D
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 456 GEKV---ASGGKDRVLKLW 471
E V ASGG D +KLW
Sbjct: 319 EENVVAMASGGHDGAVKLW 337
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 220 (82.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 60/147 (40%), Positives = 82/147 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN--G- 389
+SGS D + LW+ + + R GH + V V FS D + + SAS D++IKLWN G
Sbjct: 91 LSGSWDGELRLWDLSTGVTTR-RFVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWNTLGE 149
Query: 390 ---TTGKFVAVFRGHVGPVYQISWSADS--RLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
T G + GH G V + +S ++ ++SGS D T+KVW++ KL+ +L GH
Sbjct: 150 CKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHG 209
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V AV SPDG ASGGKD V LW
Sbjct: 210 GYVNAVAVSPDGSLCASGGKDGVTLLW 236
Score = 215 (80.7 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 75/268 (27%), Positives = 136/268 (50%)
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
P + TGH ++V + S+DG+ +SGS GEL+ WD TG + GH K + +++
Sbjct: 67 PFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRR-FVGHDKDVLSVAF 125
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSG-------HTLAVTCVKWGGDG-- 252
+ R+ VSAS+D ++W+ +L +C + G H V+CV++ +
Sbjct: 126 -----SVDNRQIVSASRDRTIKLWN-TLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQ 179
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSP 310
I +GS D T+KVW T KL L+GHG +VN++A+S + +L +G D +
Sbjct: 180 PTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLA 239
Query: 311 EEMKKAALERYNKIKGN--APER--LVSGSDDFTMFLWEPAVSK------QPKTRMTGHQ 360
E + +L+ + I +P R L + + D ++ +W+ SK +P+ ++ +Q
Sbjct: 240 EGKRLYSLDAGSIIHSLCFSPNRYWLCAATQD-SIKIWD-LESKHIVQDLKPEIPVSKNQ 297
Query: 361 QLV-NHVYFSPDGQWVASASFDKSIKLW 387
L + +S DG + + D +I+++
Sbjct: 298 MLYCTSLNWSADGSTLYAGYTDGTIRIY 325
Score = 212 (79.7 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 58/193 (30%), Positives = 91/193 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL+T + GH VL +A+S D +
Sbjct: 71 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR 130
Query: 164 HLVSGSKAGELQCWDP--QTGKPSGNPLSG---HKKWITGISWEPVHLNAPCRRFVSASK 218
+VS S+ ++ W+ + G L G H W++ + + P N VS S
Sbjct: 131 QIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSP---NTFQPTIVSGSW 187
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIREL 277
D ++W+++ K L GH V V DG + +G +D +W+ +GK + L
Sbjct: 188 DRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSL 247
Query: 278 KGHGHWVNSLALS 290
G ++SL S
Sbjct: 248 DA-GSIIHSLCFS 259
Score = 190 (71.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 45/128 (35%), Positives = 70/128 (54%)
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
P R+TGH V V S DGQ+ S S+D ++LW+ +TG F GH V +++S
Sbjct: 67 PFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFS 126
Query: 412 ADSRLLLSGSKDSTLKVWDIRTQ---KLKQDL---PGHADEVFAVDWSPDGEK--VASGG 463
D+R ++S S+D T+K+W+ + + DL GH V V +SP+ + + SG
Sbjct: 127 VDNRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGS 186
Query: 464 KDRVLKLW 471
DR +K+W
Sbjct: 187 WDRTVKVW 194
Score = 151 (58.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 42/148 (28%), Positives = 77/148 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VSGS D T+ +W K + + GH VN V SPDG AS D LW+
Sbjct: 182 IVSGSWDRTVKVWNLTNCKL-RCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAE 240
Query: 392 GK-FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPGHADE 446
GK ++ G + ++ + +S + L + ++DS +K+WD+ + Q LK ++P ++
Sbjct: 241 GKRLYSLDAGSI--IHSLCFSPNRYWLCAATQDS-IKIWDLESKHIVQDLKPEIPVSKNQ 297
Query: 447 VF---AVDWSPDGEKVASGGKDRVLKLW 471
+ +++WS DG + +G D ++++
Sbjct: 298 MLYCTSLNWSADGSTLYAGYTDGTIRIY 325
Score = 151 (58.2 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 40/131 (30%), Positives = 64/131 (48%)
Query: 356 MTGHQQLVNHVYFSPDGQ-WVASASFDKSIKLWNGTT-----------GKFVAVFR---G 400
M GH +V + D ++ S+S DKS+ +W+ T ++ FR G
Sbjct: 14 MHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTG 73
Query: 401 HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 460
H V + S+D + LSGS D L++WD+ T + GH +V +V +S D ++
Sbjct: 74 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIV 133
Query: 461 SGGKDRVLKLW 471
S +DR +KLW
Sbjct: 134 SASRDRTIKLW 144
Score = 144 (55.7 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 106 GHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQT--------------PMFKCTGHK 150
GH + V ++A D + S S D ++ +WDL P + TGH
Sbjct: 16 GHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGHS 75
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
++V + S+DG+ +SGS GEL+ WD TG + GH K + +++ +
Sbjct: 76 HFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRR-FVGHDKDVLSVAF-----SVDN 129
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSG-------HTLAVTCVKW 248
R+ VSAS+D ++W+ +L +C + G H V+CV++
Sbjct: 130 RQIVSASRDRTIKLWN-TLGECKYTIGGDLGGGEGHNGWVSCVRF 173
Score = 61 (26.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 24/84 (28%), Positives = 39/84 (46%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVWETTQ--------------GKLIRELKG 279
+ GH VT + D I + S+D ++ VW+ T G R L G
Sbjct: 14 MHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTG 73
Query: 280 HGHWVNSLALSTE--YALRTGAFD 301
H H+V + LS++ +AL +G++D
Sbjct: 74 HSHFVQDVVLSSDGQFAL-SGSWD 96
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 173 (66.0 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 45/141 (31%), Positives = 72/141 (51%)
Query: 332 LVSGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
L +GS D T LW A+ + Q +GH++ + V FSP Q +A+AS D +IKLW
Sbjct: 494 LATGSQDRTAKLW--ALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQ 551
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+ F GH V ++++ + LLS D LK+W I+ + + L H D+V+ +
Sbjct: 552 DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKVWGL 611
Query: 451 DWSPDGEKVASGGKDRVLKLW 471
S ++ +G D + LW
Sbjct: 612 HCSRLDDRALTGASDSRVVLW 632
Score = 163 (62.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 332 LVSGSDDFTMFLW---EPAVSK-----------QPKTRMTGHQQLVNHVYFSPDGQWVAS 377
LV+GS D T+ LW E +SK Q + H + +N V +P+ + +A+
Sbjct: 437 LVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAVAPNDKLLAT 496
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLK 437
S D++ KLW + + F GH ++ + +S ++L + S D T+K+W ++
Sbjct: 497 GSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL 556
Query: 438 QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ GH V V + G ++ S G D +LKLW
Sbjct: 557 KTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW 590
Score = 149 (57.5 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 56/207 (27%), Positives = 98/207 (47%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC---- 146
VF ++ + C + GHT+ VL++ GR AS + D ++R+W +N + C
Sbjct: 361 VFDLQ-TSACQI-LHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEV-ACVAQG 417
Query: 147 TGHKNWVLCIAWSA-DGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPV 204
+GH + V I S LV+GS+ ++ W P+ G G ++ + +
Sbjct: 418 SGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRC 477
Query: 205 H---LN----APCRRFVSA-SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGG-DGV 253
H +N AP + ++ S+D A++W +L +C + SGH + CV++ D V
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLW--ALPRCQLLGTFSGHRRGLWCVQFSPMDQV 535
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGH 280
+ T S D TIK+W ++ +GH
Sbjct: 536 LATASADGTIKLWALQDFSCLKTFEGH 562
Score = 141 (54.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+ AT H + + SVA +P+ + LA+GS D T +LW L + +GH+ + C+ +
Sbjct: 470 QAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQF 529
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S + L + S G ++ W Q GH + +++ V + +S+
Sbjct: 530 SPMDQVLATASADGTIKLWALQDFSCL-KTFEGHDASVLKVAF--VSRGT---QLLSSGS 583
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVW-ETTQGKLIRE 276
DG ++W + +CV L H V + D TG+ D + +W + T+ + E
Sbjct: 584 DGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAEQAEE 643
Score = 138 (53.6 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 31/115 (26%), Positives = 60/115 (52%)
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD-SRLL 417
H V + F P +A+ D ++++W+ FRG G V+ +++ D +RLL
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 418 L-SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L S + D++++VW ++ + L H V ++ +S DG + S G+D++ +W
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIW 222
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 63/257 (24%), Positives = 108/257 (42%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL---- 154
C A +GHT +V ++ S L +GS D TV+LW L + + K TGH+ +
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPL-PEALLSKGTGHEGGPVFLQA 471
Query: 155 -----C-------IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWE 202
C +A + + K L +GS+ + W + G SGH++ + + +
Sbjct: 472 QATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGT-FSGHRRGLWCVQFS 530
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDC 261
P+ + +AS DG ++W + C+ GH +V V + G + + D
Sbjct: 531 PMD-----QVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDG 585
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALST--EYALRTGAFDHT---GKQYSSPEEMKKA 316
+K+W + +R L H V L S + AL TGA D K + E+ ++
Sbjct: 586 LLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRAL-TGASDSRVVLWKDVTEAEQAEEQ 644
Query: 317 ALERYNKIKGNAPERLV 333
A +K + L+
Sbjct: 645 AKREEQVVKQQELDNLL 661
Score = 133 (51.9 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 48/204 (23%), Positives = 92/204 (45%)
Query: 93 RIRPVNRCSAT--IAGHTEAVLSVAFSPDGRQLA--SGSGDTTVRLWDLNTQTPMFKCTG 148
R+ V RC T G V VAF PD +L S + DT++R+W L ++ + T
Sbjct: 134 RVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTA 193
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN-PLSGHKKWITGISWEP---V 204
H + V + +SADG ++S + WD ++ + + P+ + + EP +
Sbjct: 194 HYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPEL 253
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVIC---LSGHTLAVT-CVKWGGDGVIYTGSQD 260
+ + F++A G R+W+ + +CV L G +T C G++ + + D
Sbjct: 254 GVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTAD 313
Query: 261 CTIKVWETTQGKLIRELKGHGHWV 284
+ +++ +L ++ G+ V
Sbjct: 314 HNLLLYDAHSLRLRKQFAGYSEEV 337
Score = 132 (51.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 48/166 (28%), Positives = 76/166 (45%)
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW-SADGKHLVSGSKAGELQCWDPQT 181
L S + D + L+D ++ + G+ VL + + + H+V S + L+ +D QT
Sbjct: 307 LLSVTADHNLLLYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQT 366
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL---SG 238
+ L GH + + V R F S +KD R+W ++ V C+ SG
Sbjct: 367 S--ACQILHGHTDIVLALD---VFRKG--RLFASCAKDQSIRVWRMNKSGEVACVAQGSG 419
Query: 239 HTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
HT +V C + + TGSQDCT+K+W + L KG GH
Sbjct: 420 HTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLS---KGTGH 462
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 40/153 (26%), Positives = 71/153 (46%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
+K+L+ Q + ++ + RC T +GH + V FSP + LA+ S D T++LW
Sbjct: 491 DKLLATGSQDRTA-KLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWA 549
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L + + GH VL +A+ + G L+S G L+ W + + L H+ +
Sbjct: 550 LQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNE-CVRTLDAHEDKV 608
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIW-DVS 228
G+ H + R ++ + D +W DV+
Sbjct: 609 WGL-----HCSRLDDRALTGASDSRVVLWKDVT 636
>UNIPROTKB|Q2KJH4 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9913
"Bos taurus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 EMBL:BC105341
IPI:IPI00716638 RefSeq:NP_001039811.1 UniGene:Bt.59546
ProteinModelPortal:Q2KJH4 STRING:Q2KJH4 PRIDE:Q2KJH4 GeneID:533223
KEGG:bta:533223 CTD:9948 OrthoDB:EOG4WH8KB NextBio:20875962
Uniprot:Q2KJH4
Length = 606
Score = 252 (93.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 101/401 (25%), Positives = 172/401 (42%)
Query: 90 AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG- 148
A F P + TI+ H V V FSPDG + A+ S D + ++D T + G
Sbjct: 171 AAFFEGPPFKFKFTISDHGRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGS 230
Query: 149 --HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK--KWITGISWEPV 204
H + I+WS D HL+S S + WD G G W+
Sbjct: 231 KAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVNTFTMGSNVLDQQLGCLWQKD 290
Query: 205 HLNAPCRRFVSASKDGDARIWDVSL-RKCVICLSGHTLAVTCV---KWGGDGVIYTGSQD 260
HL +S S G D + K + + GH+ ++ C+ K GG IY+GS D
Sbjct: 291 HL-------LSISLSGYINYLDKNNPSKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHD 343
Query: 261 CTIKVWETTQGKLIREL-KGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
I W++ G+ KGH + V+ + + L + + D T + Y++ ++ + +
Sbjct: 344 GHINYWDSETGENDSFAGKGHTNQVSRMTVDEHGQLVSCSMDDTVR-YTNLT-LRDYSGQ 401
Query: 320 RYNKIKGNAPERLVSGSDDFTMF--LWEPAVSKQPKTRMT----GHQQLVNHVYFSPDGQ 373
K+ P+ L G +T+ + + + K + + G++ V V+ P G+
Sbjct: 402 GVVKLDVQ-PKCLAVGPGGYTVVVCIGQIVLLKDQRKCFSIDNPGYEPEVVAVH--PGGE 458
Query: 374 WVASASFDKSIKLWN--GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
VA D +++L++ GTT K GPV +++S D L + V+ +
Sbjct: 459 TVAVGGADGNVRLYSILGTTLKDEGKLLEAKGPVTDLAFSHDGAFLAVCDASKVVTVFSV 518
Query: 432 RTQKLKQDL-PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ ++ GH ++ + WSPD E ASGG D ++ +W
Sbjct: 519 ADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVW 559
Score = 217 (81.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 69/215 (32%), Positives = 103/215 (47%)
Query: 239 HTLAVTCVKWGGDGVIYTGSQDCT--IKVWETTQGK-LIR-ELKGHGHWVNSLALSTEYA 294
H V K+ G Y S D + +++W+TTQ + L++ E + + +A TE +
Sbjct: 57 HAHQVVVAKYAPSG-FYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW-TEDS 114
Query: 295 LRTGAFDHTGKQYSS----PEEMKKAALERYNK------IKGNAPERLVSGSDDFTMFLW 344
R +++ + + +NK IK + P RLV+GSDD +
Sbjct: 115 KRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLVTGSDDNCAAFF 174
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG---H 401
E K K ++ H + VN V FSPDG A+AS D I +++G TG+ V G H
Sbjct: 175 EGPPFKF-KFTISDHGRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGSKAH 233
Query: 402 VGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
G +Y ISWS DS LLS S D T K+WD+ +
Sbjct: 234 DGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSV 268
Score = 193 (73.0 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 89/383 (23%), Positives = 155/383 (40%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV---LCIAWSADGK 163
H + ++++SPD L S SGD T ++WD+N + + T N + L W D
Sbjct: 233 HDGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVNTFTMGSNVLDQQLGCLWQKD-- 290
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
HL+S S +G + D + GH K I ++ VH N S S DG
Sbjct: 291 HLLSISLSGYINYLDKNNPSKPLRVIKGHSKSIQCLT---VHKNGGKSYIYSGSHDGHIN 347
Query: 224 IWDVSL-RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
WD GHT V+ + G + + S D T++ T +R+ G G
Sbjct: 348 YWDSETGENDSFAGKGHTNQVSRMTVDEHGQLVSCSMDDTVRYTNLT----LRDYSGQG- 402
Query: 283 WVNSLALSTEYALRTGAFDHT-----GKQYSSPEEMKKAALER--YN-KIKGNAP--ERL 332
V L + + L G +T G+ ++ K +++ Y ++ P E +
Sbjct: 403 -VVKLDVQPK-CLAVGPGGYTVVVCIGQIVLLKDQRKCFSIDNPGYEPEVVAVHPGGETV 460
Query: 333 VSGSDDFTMFLWEP-AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
G D + L+ + + + ++ + V + FS DG ++A K + +++
Sbjct: 461 AVGGADGNVRLYSILGTTLKDEGKLLEAKGPVTDLAFSHDGAFLAVCDASKVVTVFSVAD 520
Query: 392 GKFVA-VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP-GHA-DEVF 448
G VF GH + ++WS D+ SG D + VW + + + + H V
Sbjct: 521 GYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVS 580
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
++ W D + + D +K W
Sbjct: 581 SLAWL-DEHTLVTTSHDASVKEW 602
Score = 143 (55.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 55/210 (26%), Positives = 92/210 (43%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK--NWVLCIAWSADGKH 164
H V+ ++P G +ASG +R+WD + + K + IAW+ D K
Sbjct: 57 HAHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKR 116
Query: 165 L-VSGS---KAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ V G K G + WD +G G ++GH K I + + + P R V+ S D
Sbjct: 117 IAVVGEGREKFGAVFLWD--SGSSVGE-ITGHNKVINSVD---IKQSRPYR-LVTGSDDN 169
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIREL-- 277
A ++ K +S H V CV++ DG + T S D I +++ G+ + L
Sbjct: 170 CAAFFEGPPFKFKFTISDHGRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGG 229
Query: 278 -KGHGHWVNSLALSTEYA-LRTGAFDHTGK 305
K H + +++ S + L + + D T K
Sbjct: 230 SKAHDGGIYAISWSPDSTHLLSASGDKTSK 259
Score = 133 (51.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 48/194 (24%), Positives = 81/194 (41%)
Query: 104 IAGHTEAVLSVAFSPDGR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I GH + + SV +L +GS D ++ F + H +V C+ +S DG
Sbjct: 142 ITGHNKVINSVDIKQSRPYRLVTGSDDNCAAFFEGPPFKFKFTISDHGRFVNCVRFSPDG 201
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSG---HKKWITGISWEPVHLNAPCRRFVSASKD 219
+ S G++ +D +TG+ L G H I ISW P +SAS D
Sbjct: 202 NRFATASADGQIFIYDGKTGEKVC-ALGGSKAHDGGIYAISWSP-----DSTHLLSASGD 255
Query: 220 GDARIWDVSLRKCV--ICLSGHTL--AVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
++IWDV++ V + + L + C+ W D ++ + + K +R
Sbjct: 256 KTSKIWDVNVNSVVNTFTMGSNVLDQQLGCL-WQKDHLLSISLSGYINYLDKNNPSKPLR 314
Query: 276 ELKGHGHWVNSLAL 289
+KGH + L +
Sbjct: 315 VIKGHSKSIQCLTV 328
Score = 74 (31.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF-VAVFRGH-VGPVYQISWSADSR 415
GH + + +SPD + AS D + +W + + V + H + V ++W D
Sbjct: 530 GHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAW-LDEH 588
Query: 416 LLLSGSKDSTLKVWDI 431
L++ S D+++K W I
Sbjct: 589 TLVTTSHDASVKEWTI 604
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 200 (75.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 81/315 (25%), Positives = 136/315 (43%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+PV TI GH V +++FS D + SG+ ++ +++W+ +T + T + L
Sbjct: 402 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSGAAES-IKIWNRSTLQCIRTMTCE--YAL 458
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
C + + +V G+K G+LQ +D +G + H G W + L+ R FV
Sbjct: 459 CSFFVPGDRQVVIGTKTGKLQLYDLASGNLL-ETVDAHD----GALWS-LSLSPDQRGFV 512
Query: 215 SASKDGDARIWDVSL-------RKCVICLSGHTLA----VTCVKWGGDGVIYTGSQ-DCT 262
+ D + WD L +K + TL V CV + + + S DCT
Sbjct: 513 TGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCT 572
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSP-EEMKKAALER 320
+K++ K L GH V + +S + AL TG+ D K + + K+
Sbjct: 573 VKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAH 632
Query: 321 -----YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
Y K + +G D + W+ + +T + GH Q + + SP G +V
Sbjct: 633 DDSVMYLKFVPKSHLFFTAGKDR-KIKQWDADKFEHVQT-LEGHHQEIWCLAISPSGDYV 690
Query: 376 ASASFDKSIKLWNGT 390
S+S DKS++LW T
Sbjct: 691 VSSSHDKSLRLWERT 705
Score = 179 (68.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 59/203 (29%), Positives = 93/203 (45%)
Query: 132 VRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN-PLS 190
V +WDL + G K+ V C+ S DG HL G + G ++ + +G+ GN +
Sbjct: 47 VFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGE--GNVTFN 104
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK +T + ++ L R S SKD D +WDV + L GH A+T +
Sbjct: 105 GHKAAVTSLKYD--QLGG---RLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLR 159
Query: 251 D-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYS 308
+ ++ + +D +K W+ + + GH V L L S E L TGA D + +
Sbjct: 160 EKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
Query: 309 SP--EEMKKAALERYNKIKGNAP 329
EE++ KIKG++P
Sbjct: 220 IAYLEEIEDPEEPEPKKIKGSSP 242
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 55/194 (28%), Positives = 91/194 (46%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSG 168
E VL V++SP+ + LA D TV+++ ++T GHK V+C+ S DG + +G
Sbjct: 550 EEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATG 609
Query: 169 SKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKDGDARIWDV 227
S ++ W G L H + + + P HL F +A KD + WD
Sbjct: 610 SADRNVKIWGLDFGD-CHKSLFAHDDSVMYLKFVPKSHL------FFTAGKDRKIKQWDA 662
Query: 228 SLRKCVICLSGHTLAVTC--VKWGGDGVIYTGSQDCTIKVWETTQGKLI----RELKGHG 281
+ V L GH + C + GD V+ + S D ++++WE T+ LI RE++
Sbjct: 663 DKFEHVQTLEGHHQEIWCLAISPSGDYVV-SSSHDKSLRLWERTREPLILEEEREMQREA 721
Query: 282 HWVNSLALSTEYAL 295
+ S+A + A+
Sbjct: 722 EYEESVAKEDQPAV 735
Score = 160 (61.4 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 62/265 (23%), Positives = 117/265 (44%)
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+IW+ S +C+ ++ A+ GD + G++ +++++ G L+ + H
Sbjct: 439 KIWNRSTLQCIRTMTCE-YALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETVDAHDG 497
Query: 283 WVNSLALSTEY-ALRTGAFDHTGKQYSSP---EE---MKKAALERYNKIKGNAPERLVSG 335
+ SL+LS + TG D + K + +E K+ ++++ ++ + VS
Sbjct: 498 ALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSY 557
Query: 336 SDD---FTMFLWEPAVS----KQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKL 386
S + + L + V K ++ GH+ V + S DG +A+ S D+++K+
Sbjct: 558 SPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKI 617
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W G H V + + S L + KD +K WD + Q L GH E
Sbjct: 618 WGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQE 677
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
++ + SP G+ V S D+ L+LW
Sbjct: 678 IWCLAISPSGDYVVSSSHDKSLRLW 702
Score = 148 (57.2 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 35/128 (27%), Positives = 66/128 (51%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
+ T GH AV S+ + G +LASGS DT + +WD+ ++ +++ GHK+ + +
Sbjct: 100 NVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLR 159
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ LVS K ++ WD T + + GH+ + G+ L + +R ++ + D
Sbjct: 160 EKNLLVSSGKDTMVKWWDLDT-QHCFKTVVGHRTEVWGLV-----LVSEEKRLITGASDS 213
Query: 221 DARIWDVS 228
+ R WD++
Sbjct: 214 ELRAWDIA 221
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 49/188 (26%), Positives = 87/188 (46%)
Query: 255 YTGSQDCT-IKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS--SP 310
Y C + +W+ +G+ I L+G H V L S + L G D + + +S S
Sbjct: 38 YVAVPACEHVFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSG 97
Query: 311 E-----EMKKAALE--RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV 363
E KAA+ +Y+++ G RL SGS D + +W+ +++ R+ GH+ +
Sbjct: 98 EGNVTFNGHKAAVTSLKYDQLGG----RLASGSKDTDIIVWD-VINESGLYRLKGHKDAI 152
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKD 423
F + + S+ D +K W+ T GH V+ + ++ + L++G+ D
Sbjct: 153 TQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASD 212
Query: 424 STLKVWDI 431
S L+ WDI
Sbjct: 213 SELRAWDI 220
Score = 142 (55.0 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 48/166 (28%), Positives = 72/166 (43%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ G V + SPDG LA G D ++R++ L + GHK V + + G
Sbjct: 61 LQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGG 120
Query: 164 HLVSGSKAGELQCWDPQTGKPSG-NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L SGSK ++ WD SG L GHK IT + + L VS+ KD
Sbjct: 121 RLASGSKDTDIIVWD--VINESGLYRLKGHKDAIT----QALFLREK-NLLVSSGKDTMV 173
Query: 223 RIWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWE 267
+ WD+ + C + GH V V + + TG+ D ++ W+
Sbjct: 174 KWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/140 (25%), Positives = 67/140 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L G +D ++ ++ +S + GH+ V + + G +AS S D I +W+
Sbjct: 80 LAVGYEDGSIRIFS-LLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVIN 138
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ +GH + Q + + LL+S KD+ +K WD+ TQ + + GH EV+ +
Sbjct: 139 ESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLV 198
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+ +++ +G D L+ W
Sbjct: 199 LVSEEKRLITGASDSELRAW 218
Score = 140 (54.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 38/132 (28%), Positives = 64/132 (48%)
Query: 341 MFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR 399
+F+W+ + K K + G + V + SPDG +A D SI++++ +G+ F
Sbjct: 47 VFIWD--LRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN 104
Query: 400 GHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 459
GH V + + L SGSKD+ + VWD+ + L GH D + + + +
Sbjct: 105 GHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLL 164
Query: 460 ASGGKDRVLKLW 471
S GKD ++K W
Sbjct: 165 VSSGKDTMVKWW 176
Score = 120 (47.3 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH +A+ F + L S DT V+ WDL+TQ GH+ V + ++ K
Sbjct: 145 LKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEK 204
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
L++G+ EL+ WD + +P K I G S
Sbjct: 205 RLITGASDSELRAWDIAYLEEIEDPEEPEPKKIKGSS 241
Score = 118 (46.6 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 36/131 (27%), Positives = 68/131 (51%)
Query: 346 PAV-SKQP-KT-RMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG 400
P+V + QP +T R+T GH+ V + FS D V S + + SIK+WN +T + +
Sbjct: 396 PSVPASQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSGAAE-SIKIWNRSTLQCIRTMTC 454
Query: 401 HVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 460
+ D ++++ G+K L+++D+ + L + + H ++++ SPD
Sbjct: 455 EYA-LCSFFVPGDRQVVI-GTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFV 512
Query: 461 SGGKDRVLKLW 471
+GG D+ +K W
Sbjct: 513 TGGADKSVKFW 523
Score = 99 (39.9 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 34/137 (24%), Positives = 63/137 (45%)
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRE 276
+DG RI+ + + + +GH AVT +K+ G + +GS+D I VW+ +
Sbjct: 85 EDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYR 144
Query: 277 LKGHGHWVN-SLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG----NAPE 330
LKGH + +L L + L + D K + + K + ++ G + +
Sbjct: 145 LKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEK 204
Query: 331 RLVSGSDDFTMFLWEPA 347
RL++G+ D + W+ A
Sbjct: 205 RLITGASDSELRAWDIA 221
Score = 98 (39.6 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+ +GS D + +W K+ + H V ++ F P +A D+ IK W+
Sbjct: 606 IATGSADRNVKIWGLDFGDCHKS-LFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADK 664
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
+ V GH ++ ++ S ++S S D +L++W+ RT++
Sbjct: 665 FEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE-RTRE 707
Score = 69 (29.3 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL 137
C T+ GH V + + ++L +G+ D+ +R WD+
Sbjct: 183 CFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWDI 220
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 232 (86.7 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 47/138 (34%), Positives = 76/138 (55%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
S S D T LW P GH V+ V F P+ ++A+ S DK+++LW+ G
Sbjct: 401 SASHDRTARLWS-FDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 459
Query: 394 FVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 453
V +F GH GPV +++S + + L S +D LK+WD+ + L ++L GH D + ++ +S
Sbjct: 460 SVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 454 PDGEKVASGGKDRVLKLW 471
PD +AS D +++W
Sbjct: 520 PDSSLIASASMDNSVRVW 537
Score = 207 (77.9 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 61/222 (27%), Positives = 104/222 (46%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST-EY 293
L GH V ++ D + + S+D +I+ W+ +GH + V L +S
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSL 397
Query: 294 ALRTGAFDHTGKQYSS----PEEMKKAALERYNKIKGNAPER-LVSGSDDFTMFLWEPAV 348
+ + D T + +S P + L + +K + L +GS D T+ LW
Sbjct: 398 YFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 457
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
+ TGH+ V + FSP+G+++ASA D+ +KLW+ +G RGH + +
Sbjct: 458 GNSVRL-FTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL 516
Query: 409 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
++S DS L+ S S D++++VWDIR G + E+ V
Sbjct: 517 TFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSELVGV 558
Score = 184 (69.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 46/128 (35%), Positives = 62/128 (48%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AGH V V F P+ LA+GS D TVRLW + TGH+ VL +A+S +GK+
Sbjct: 423 AGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKY 482
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L S + L+ WD +G L GH IT +++ P SAS D R+
Sbjct: 483 LASAGEDQRLKLWDLASGTLY-KELRGHTDNITSLTFSP-----DSSLIASASMDNSVRV 536
Query: 225 WDVSLRKC 232
WD+ C
Sbjct: 537 WDIRNTYC 544
Score = 177 (67.4 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 43/140 (30%), Positives = 74/140 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S+D ++ W+ S GH V + SP + ASAS D++ +LW+
Sbjct: 357 LLSCSEDMSIRYWDLR-SFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDR 415
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ ++ GH+ V + + +S L +GS D T+++W + + GH V A+
Sbjct: 416 TYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALA 475
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+SP+G+ +AS G+D+ LKLW
Sbjct: 476 FSPNGKYLASAGEDQRLKLW 495
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 45/163 (27%), Positives = 76/163 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V + SP AS S D T RLW + P+ GH V C+ + + +L
Sbjct: 382 GHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYL 441
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+GS ++ W Q G S +GH+ + +++ P N + SA +D ++W
Sbjct: 442 ATGSTDKTVRLWSTQQGN-SVRLFTGHRGPVLALAFSP---NG--KYLASAGEDQRLKLW 495
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D++ L GHT +T + + D +I + S D +++VW+
Sbjct: 496 DLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 155 (59.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 51/199 (25%), Positives = 82/199 (41%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN--TQTPMFKCTGHKNWVLCIAWSAD 161
+ GH V S F D L S S D ++R WDL T T +++ + W L I S
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDI--SPC 395
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ S S + W P +GH + + + P N+ + S D
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPL-RIYAGHLLDVDCVKFHP---NS--NYLATGSTDKT 449
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+W V +GH V + + +G + + +D +K+W+ G L +EL+GH
Sbjct: 450 VRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGH 509
Query: 281 GHWVNSLALSTEYALRTGA 299
+ SL S + +L A
Sbjct: 510 TDNITSLTFSPDSSLIASA 528
Score = 144 (55.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 49/158 (31%), Positives = 74/158 (46%)
Query: 136 DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPL-SGHKK 194
D + T M GH V + +D L+S S+ ++ WD ++ + L GH
Sbjct: 328 DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSF--TNTVLYQGHAY 385
Query: 195 WITGISWEPVHLNAPCRR-FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDG 252
+ W+ + ++ PC F SAS D AR+W + +GH L V CVK+
Sbjct: 386 PV----WD-LDIS-PCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSN 439
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
+ TGS D T+++W T QG +R GH V +LA S
Sbjct: 440 YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFS 477
Score = 140 (54.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
+ G + + RGH GPVY + +DS LLS S+D +++ WD+R+ GHA V+
Sbjct: 330 SAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWD 389
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
+D SP AS DR +LW
Sbjct: 390 LDISPCSLYFASASHDRTARLW 411
Score = 140 (54.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 35/117 (29%), Positives = 56/117 (47%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSR 415
+ GH V F D + S S D SI+ W+ + +++GH PV+ + S S
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSL 397
Query: 416 LLLSGSKDSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S S D T ++W RT L+ GH +V V + P+ +A+G D+ ++LW
Sbjct: 398 YFASASHDRTARLWSFDRTYPLRI-YAGHLLDVDCVKFHPNSNYLATGSTDKTVRLW 453
Score = 63 (27.2 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 107 HTEAVLSVA-FSPDGRQLASGSGDTTVRLWDLNTQ 140
+TE +L+ A SP+ + LA+G ++ V+LW L ++
Sbjct: 266 NTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSK 300
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 250 (93.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 71/249 (28%), Positives = 132/249 (53%)
Query: 229 LRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
LR+ + C S ++ V C+++ DG I +G +D TIK+W+ T + ++ L GH V L
Sbjct: 200 LRR-INCRSENSKGVYCLQYD-DGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQ 257
Query: 289 LSTEYALRTGAFDHTGKQYS-SPEEMKKAAL---ERYNKIKGNAPERLVSGSDDFTMFLW 344
+ + +G+ D T + + + EM + E ++ N +V+ S D ++ +W
Sbjct: 258 YDDKVII-SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVW 315
Query: 345 EPAVSKQPKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+ + R + GH+ VN V F D +++ SAS D++IK+W+ +T +FV GH
Sbjct: 316 DMTSPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHK 373
Query: 403 GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 462
+ + + RL++SGS D+++++WDI + L GH + V + + D +++ SG
Sbjct: 374 RGIACLQYR--DRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF--DTKRIVSG 429
Query: 463 GKDRVLKLW 471
D +K+W
Sbjct: 430 AYDGKIKVW 438
Score = 226 (84.6 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 66/226 (29%), Positives = 117/226 (51%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
+ VS +D +IWD + +CV L GHT +V C+++ D VI +GS D T++VW+ G
Sbjct: 222 KIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYD-DKVIISGSSDSTVRVWDVNTG 280
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY--SSPEEMKKAALERYNKIKGNA- 328
+++ L H V L + + T + D + + +SP E+ + ++ N
Sbjct: 281 EMVNTLIHHCEAVLHLRFNNGMMV-TCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVV 339
Query: 329 --PER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
E+ +VS S D T+ +W + + +T + GH++ + + + + V S S D SI+
Sbjct: 340 DFDEKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNSIR 396
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 431
LW+ G + V GH V I + D++ ++SG+ D +KVWD+
Sbjct: 397 LWDIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKIKVWDL 440
Score = 226 (84.6 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 77/285 (27%), Positives = 139/285 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT +VL + + D + + SGS D+TVR+WD+NT + H VL + +
Sbjct: 241 QCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 298
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSG----NPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ +G +V+ SK + WD + PS L GH+ + + ++ ++ V
Sbjct: 299 N-NGM-MVTCSKDRSIAVWDMTS--PSEITLRRVLVGHRAAVNVVDFDEKYI-------V 347
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
SAS D ++W S + V L+GH + C+++ D ++ +GS D +I++W+ G +
Sbjct: 348 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNSIRLWDIECGACL 406
Query: 275 RELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMK-KAA---------LERYNKI 324
R L+GH V + T+ + +GA+D K + + +AA +E ++
Sbjct: 407 RVLEGHEELVRCIRFDTKRIV-SGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRV 465
Query: 325 -KGNAPE-RLVSGSDDFTMFLWE--PAVSKQPKTRMTGHQQLVNH 365
+ E ++VS S D T+ +W+ + KT T L+ H
Sbjct: 466 FRLQFDEFQIVSSSHDDTILIWDFLNFTPNENKTGRTPSPALMEH 510
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 75/285 (26%), Positives = 129/285 (45%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
DG+ + SG D T+++WD + GH VLC+ + D K ++SGS ++ WD
Sbjct: 220 DGK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWD 276
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 277 VNTGEMV-NTLIHHCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRV 328
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + + I + S D TIKVW T+ + +R L GH + L
Sbjct: 329 LV---GHRAAVNVVDFD-EKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 384
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA---PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D++ + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 385 LVV-SGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDLVAA 443
Query: 350 KQPKTRMTGH--QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ LV H V+ D + S+S D +I +W+
Sbjct: 444 LDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHDDTILIWD 488
Score = 203 (76.5 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 79/295 (26%), Positives = 136/295 (46%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V C+ + DGK +VSG + ++ WD +T L GH + + ++ +
Sbjct: 213 VYCLQYD-DGK-IVSGLRDNTIKIWD-RTDLQCVKTLMGHTGSVLCLQYDD-------KV 262
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+S S D R+WDV+ + V L H AV +++ +G++ T S+D +I VW+ T
Sbjct: 263 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMTSPS 321
Query: 273 LI---RELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
I R L GH VN + +Y + D T K +S+ L + + G A
Sbjct: 322 EITLRRVLVGHRAAVNVVDFDEKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKR--GIAC 378
Query: 329 ---PERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+RLV SGS D ++ LW+ + + GH++LV + F D + + S ++D I
Sbjct: 379 LQYRDRLVVSGSSDNSIRLWDIECGACLRV-LEGHEELVRCIRF--DTKRIVSGAYDGKI 435
Query: 385 KLWN---------GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
K+W+ + + H G V+++ + D ++S S D T+ +WD
Sbjct: 436 KVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQF--DEFQIVSSSHDDTILIWD 488
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 250 (93.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 86/295 (29%), Positives = 133/295 (45%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V + W+++G L +GS G + W S L HK I + W N
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW-----NKKGNF 280
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+SA D IWD + H+ V W + + S D I V + Q +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR 340
Query: 273 LIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IK-- 325
I+ +GH + VN++ T L + + D T K +S ++ L+ +NK IK
Sbjct: 341 PIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWS 400
Query: 326 --G------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVAS 377
G NA L S S D T+ LW+ T +T HQ+ V V FSPDG+++AS
Sbjct: 401 PTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHT-LTKHQEPVYSVAFSPDGRYLAS 459
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
SFDK + +WN TG V +RG G ++++ W+A + + + D ++ V D+R
Sbjct: 460 GSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
Score = 210 (79.0 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 80/319 (25%), Positives = 129/319 (40%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S +G Q + G + +K +T + W N+ + S DG AR
Sbjct: 197 NLSENSTSGSTQLVLRHCIREGGQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFAR 250
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IW L H + +KW G I + D T +W+ G+ + H
Sbjct: 251 IWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSA 309
Query: 283 W---VNSLALSTEYALRTGAFDHTGKQ-YSSPEEMKKAALERYNKIKGNAPERLVSG-SD 337
V+ + +T + T H K P + + N IK + L++ SD
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSD 369
Query: 338 DFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQ---------WVASASFDKSIKL 386
D T+ +W KQ + H + + + +SP G +ASASFD +++L
Sbjct: 370 DMTLKIWS---MKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRL 426
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ G + H PVY +++S D R L SGS D + +W+ +T L G
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG- 485
Query: 447 VFAVDWSPDGEKVASGGKD 465
+F V W+ G+KV + D
Sbjct: 486 IFEVCWNAAGDKVGASASD 504
Score = 204 (76.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 70/248 (28%), Positives = 109/248 (43%)
Query: 243 VTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH-G-----HW--VNSLALSTEY 293
VT + W +G + TGS D ++W T G L L H G W + LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 294 ALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP 352
T +D HTG+ AL+ + + S S D + + + +
Sbjct: 287 DKTTIIWDAHTGEAKQLFPFHSAPALD----VDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
KT GH VN + + P G +AS S D ++K+W+ V + H +Y I WS
Sbjct: 343 KT-FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 413 --------DSRLLL-SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
++ L+L S S DST+++WD+ L H + V++V +SPDG +ASG
Sbjct: 402 TGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGS 461
Query: 464 KDRVLKLW 471
D+ + +W
Sbjct: 462 FDKCVHIW 469
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 65/243 (26%), Positives = 103/243 (42%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-------TQTPMFKCT- 147
P N+ + + GH V A++P LASGSGD+T R+W+L+ TQ + C
Sbjct: 158 PPNK-AVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR 216
Query: 148 -GHKNW-----VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
G ++ V + W+++G L +GS G + W S L HK I + W
Sbjct: 217 EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW 274
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDC 261
N +SA D IWD + H+ V W + + S D
Sbjct: 275 -----NKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDM 329
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER 320
I V + Q + I+ +GH + VN++ T L + + D T K +S ++ L+
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA 389
Query: 321 YNK 323
+NK
Sbjct: 390 HNK 392
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 332 LVSGSDDFTMFLWEPAV-SKQPKTRMT-------GHQQL-----VNHVYFSPDGQWVASA 378
L SGS D T +W + S T++ G Q + V + ++ +G +A+
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
S+D ++W G + H GP++ + W+ +LS D T +WD T + KQ
Sbjct: 244 SYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQ 302
Query: 439 DLPGHADEVFAVDW 452
P H+ VDW
Sbjct: 303 LFPFHSAPALDVDW 316
Score = 128 (50.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGR---------QLASGSGDTTVRLWDLNTQTPMFKCTG 148
+ C + H + + ++ +SP G LAS S D+TVRLWD++ + T
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
H+ V +A+S DG++L SGS + W+ QTG
Sbjct: 441 HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFR------GHVGP- 404
+ GH+ V ++P +AS S D + ++WN T+G V R G P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 405 ---VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
V + W+++ LL +GS D ++W + L L H +FA+ W+ G + S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 462 GGKDRVLKLW 471
G D+ +W
Sbjct: 284 AGVDKTTIIW 293
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR-------TQKLK--------QDLP 441
V RGH V+ +W+ S LL SGS DST ++W++ TQ + QD+P
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ D V ++DW+ +G +A+G D ++W
Sbjct: 224 SNKD-VTSLDWNSEGTLLATGSYDGFARIW 252
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 8 TNNVMCLLTDPEGNPLGA 25
TN V + DP GN L +
Sbjct: 349 TNEVNAIKWDPTGNLLAS 366
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 250 (93.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 53/140 (37%), Positives = 78/140 (55%)
Query: 333 VSGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
VSG + + LW ++ K QP + GH V F P G+++ASAS+D + +LW+ T
Sbjct: 266 VSGGGEGNVCLW--SLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVET 323
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
+ + GH VY ++++ D LL SG DS +VWD+RT + L GH E+F +D
Sbjct: 324 TAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLD 383
Query: 452 WSPDGEKVASGGKDRVLKLW 471
W DG +V SG D +K W
Sbjct: 384 WGVDGYRVLSGSGDGWVKCW 403
Score = 205 (77.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 87/383 (22%), Positives = 151/383 (39%)
Query: 62 ELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGR 121
E +PL ++++ K EK+ + + RPV+ C F+PDG+
Sbjct: 165 ESTIPLRTHIKHRKAIKEKLHNFDLYGSQIAGDRPVSICR--------------FAPDGQ 210
Query: 122 QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW-----------SADGKHLVSGSK 170
+A+G+ +RL + GH + V ++W S + VSG
Sbjct: 211 TIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVNFVSGGG 270
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G + W +P L GH + + P + SAS D R+WDV
Sbjct: 271 EGNVCLWSLDKDQPLAT-LEGHSGRVCRTEFHPSG-----KYIASASYDTTWRLWDVETT 324
Query: 231 KCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+ GH+ V V + DG ++ +G D +VW+ G+ + L+GH + L
Sbjct: 325 AELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDW 384
Query: 290 STE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAV 348
+ Y + +G+ D K + + + + + + R GS+ + FL P
Sbjct: 385 GVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDV--RWYKGSESAS-FL--PTT 439
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
QP RM V G + S+ FDK++ +++ + GH G V
Sbjct: 440 EGQPG-RMDVDGATAP-VQPRKSGTFFVSSGFDKNVNIFSADDWSLIKTLSGHSGNVLSA 497
Query: 409 SWSADSRLLLSGSKDSTLKVWDI 431
S +++ + S D T+K+W I
Sbjct: 498 DISNNAQWIASCGHDRTVKLWGI 520
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+ S S D T LW+ + + + + GH + V V F+ DG +AS D ++W+ T
Sbjct: 307 IASASYDTTWRLWDVETTAELQLQ-EGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRT 365
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
G+ V + GH+ ++ + W D +LSGS D +K WD+R K + H V V
Sbjct: 366 GRTVMILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDVR 425
Query: 452 WSPDGEKVA 460
W E +
Sbjct: 426 WYKGSESAS 434
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 190 (71.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 67/266 (25%), Positives = 122/266 (45%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSV---EKVLSIVY--QPQAV----- 91
++ ++NN++K+ S+H LL+ G LE+ + ++++ I Y +
Sbjct: 347 ISSIINNKDKI--ISITSEHNLLIYNGKTLERQGEIIGYNDEIIDIKYINDDNIIVATNS 404
Query: 92 --FRIRPVNRCSATIA-GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG 148
+ +N A + GH + V+SV S DG+ + SGS D + +WDL + + + TG
Sbjct: 405 NEIKTYDLNTKRAQVLRGHEDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTG 464
Query: 149 HKNWVLCIAWS---ADGKHLVSGSKAGELQCWDP-QTGKPSGNPLSGHK-KWITGISWEP 203
H + C+A + ++ S ++ W T SG S K K I+ +
Sbjct: 465 HTGVISCVALPKKPSTSMFAITASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISASVTKI 524
Query: 204 VH---LN----APCRR-FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVI 254
H +N AP + F +AS+D ++W+V+ + + + H V V++ D
Sbjct: 525 AHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCF 584
Query: 255 YTGSQDCTIKVWETTQGKLIRELKGH 280
T S D TIK+W + ++ L+GH
Sbjct: 585 LTCSADGTIKIWSLSDYTCLKTLEGH 610
Score = 180 (68.4 bits), Expect = 4.1e-17, Sum P(3) = 4.1e-17
Identities = 47/177 (26%), Positives = 85/177 (48%)
Query: 297 TGAFDHTGKQYSSPEEMKKAALER-YNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKT 354
+G D K + K A E+ N I +++ + S D + LW + +P T
Sbjct: 505 SGGDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWN-VNNLEPIT 563
Query: 355 RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADS 414
+ H++ V HV FSP Q + S D +IK+W+ + + GH G V + S+ +
Sbjct: 564 SIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFG 623
Query: 415 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
++S + + +K+W+I+T + GH +++A+ + D E+ +GG D L W
Sbjct: 624 MQIVSVASEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSDSKLIAW 680
Score = 139 (54.0 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 41/172 (23%), Positives = 81/172 (47%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K+ + ++ K L + I N ++++S + + + ++ ++ + + ++++
Sbjct: 331 KKTDNDDKDKTDTLYTISSIINNK-DKIISITSEHNLLIYNGKTLERQGEIIGYNDEIID 389
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
Y + D VA+ S IK ++ T K V RGH V + SAD + ++SGS+D
Sbjct: 390 IKYINDDNIIVATNS--NEIKTYDLNT-KRAQVLRGHEDLVMSVDVSADGKHIISGSRDK 446
Query: 425 TLKVWDIRTQKLKQDLPGHADEV--FAVDWSPDGEKVA-SGGKDRVLKLWMG 473
+ +WD+ ++ L GH + A+ P A + DR +KLW G
Sbjct: 447 SAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAITASDDRTIKLWKG 498
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/168 (21%), Positives = 75/168 (44%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S T H + + S++ +P+ + A+ S D+ V+LW++N P+ H+ V + +S
Sbjct: 520 SVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSP 579
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++ S G ++ W + L GHK + S+ + + VS + +G
Sbjct: 580 IDQCFLTCSADGTIKIWS-LSDYTCLKTLEGHKGSVLKASFISFGM-----QIVSVASEG 633
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
++W++ +C+ GH + + D + TG D + W+
Sbjct: 634 LIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSDSKLIAWK 681
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 32/114 (28%), Positives = 60/114 (52%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLL 417
GH+ +N + G VASAS DK++K+W+ G F+ H V + + L
Sbjct: 127 GHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ-HDDVVTMLKFHPTLLKL 185
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
++ D ++V+D+ T++ L H ++ + +S G+++ S G+D+VL +W
Sbjct: 186 VTVCLDLNIRVYDLVTKECVI-LTNHLSQISGITFSNSGKELISSGRDKVLNVW 238
Score = 122 (48.0 bits), Expect = 0.00059, P = 0.00059
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
+K+ + Q V ++ VN +I H V V FSP + + S D T+++W
Sbjct: 539 DKIFATASQDSYV-KLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWS 597
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L+ T + GHK VL ++ + G +VS + G ++ W+ +T + N GH+ I
Sbjct: 598 LSDYTCLKTLEGHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECL-NTFEGHESKI 656
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + RF++ D W
Sbjct: 657 WALS-----VAKDQERFITGGSDSKLIAW 680
Score = 120 (47.3 bits), Expect = 0.00097, P = 0.00097
Identities = 44/185 (23%), Positives = 89/185 (48%)
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEE--MK--KAA 317
IK+ +T G +I +++ +++ ALS + G + KQY ++ +K K
Sbjct: 70 IKIIDTEHGTVISKIESDTK-ISTFALSPNNEEILIGCSNLQIKQYRIEDQSLVKIWKGH 128
Query: 318 LERYNKIKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
N+I ++ +V S S D T+ +W+ + K T H +V + F P +
Sbjct: 129 EGPINEIDIHSSGNIVASASSDKTVKVWD--LEKGYCTHNFQHDDVVTMLKFHPTLLKLV 186
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKL 436
+ D +I++++ T + V + H+ + I++S + L+S +D L VWD+ ++
Sbjct: 187 TVCLDLNIRVYDLVTKECV-ILTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNP 245
Query: 437 KQDLP 441
K+ +P
Sbjct: 246 KKTIP 250
Score = 115 (45.5 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 29/99 (29%), Positives = 46/99 (46%)
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ +W + KT + GH+ V F G + S + + IKLWN T + +
Sbjct: 588 SADGTIKIWSLSDYTCLKT-LEGHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECL 646
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ 434
F GH ++ +S + D ++G DS L W T+
Sbjct: 647 NTFEGHESKIWALSVAKDQERFITGGSDSKLIAWKDHTE 685
Score = 115 (45.5 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 37/183 (20%), Positives = 84/183 (45%)
Query: 89 QAVFRIRPVNRCSATIAGHTEA---VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFK 145
QA + I+ ++ T+ E+ + + A SP+ ++ G + ++ + + Q+ +
Sbjct: 65 QAGYEIKIIDTEHGTVISKIESDTKISTFALSPNNEEILIGCSNLQIKQYRIEDQSLVKI 124
Query: 146 CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
GH+ + I + G + S S ++ WD + G + N H +T + + P
Sbjct: 125 WKGHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHN--FQHDDVVTMLKFHPTL 182
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIK 264
L + V+ D + R++D+ ++CVI L+ H ++ + + G + + +D +
Sbjct: 183 L-----KLVTVCLDLNIRVYDLVTKECVI-LTNHLSQISGITFSNSGKELISSGRDKVLN 236
Query: 265 VWE 267
VW+
Sbjct: 237 VWD 239
Score = 94 (38.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 40/169 (23%), Positives = 75/169 (44%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H + V + F P +L + D +R++DL T+ + T H + + I +S GK L+
Sbjct: 169 HDDVVTMLKFHPTLLKLVTVCLDLNIRVYDLVTKECVI-LTNHLSQISGITFSNSGKELI 227
Query: 167 SGSKAGELQCWDPQTGKPSGN-PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S + L WD + P P+ +++ + GI + P + S ++ +I
Sbjct: 228 SSGRDKVLNVWDMLSKNPKKTIPI--YQE-LGGI------ITLPKESYNSLPENSKIKI- 277
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
+R+ V ++ H +K G D I G ++ ++ W T G+ I
Sbjct: 278 -EKIREKVKTMAAHA---DKIKNGDDITIVIGGEE-VLRAWCTETGECI 321
Score = 85 (35.0 bits), Expect = 4.1e-17, Sum P(3) = 4.1e-17
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGK 272
+ A+ + + +D++ ++ + L GH V V DG I +GS+D + +W+ + +
Sbjct: 399 IVATNSNEIKTYDLNTKRAQV-LRGHEDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKE 457
Query: 273 LIRELKGHGHWVNSLAL----STEYALRTGAFDHTGK 305
I +L GH ++ +AL ST T + D T K
Sbjct: 458 SIAQLTGHTGVISCVALPKKPSTSMFAITASDDRTIK 494
Score = 70 (29.7 bits), Expect = 4.1e-17, Sum P(3) = 4.1e-17
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQ--TPMFKCTGHKNWVLCIAWSADGK 163
GH + + G +AS S D TV++WDL T F+ H + V + +
Sbjct: 127 GHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ---HDDVVTMLKFHPTLL 183
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
LV+ ++ +D T + L+ H I+GI++ N+ + +S+ +D
Sbjct: 184 KLVTVCLDLNIRVYDLVTKECV--ILTNHLSQISGITFS----NSG-KELISSGRDKVLN 236
Query: 224 IWDV 227
+WD+
Sbjct: 237 VWDM 240
Score = 67 (28.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTP 142
+ H + + FS G++L S D + +WD+ ++ P
Sbjct: 207 LTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNP 245
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 184 (69.8 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 51/170 (30%), Positives = 78/170 (45%)
Query: 107 HTEAVLSVAFSPDGRQL-ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H ++V SV+ +P L ASG GD +WD+ T + + TGHK+ ++ I WS DG ++
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS-KDGDARI 224
+G +++ W TG + I +SW P L F++A DG +
Sbjct: 120 ATGGMDSQVRLWKSSTGFEFITAFETVDE-IVWLSWHPKGL------FLAAGCNDGSIWM 172
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGV---IYTGSQDCTIKVWETTQG 271
W + K V + GHT V K+ GV + T T+ VW G
Sbjct: 173 WSLPSGKVVQVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNPATG 222
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 64/303 (21%), Positives = 121/303 (39%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH ++++++ +S DG +A+G D+ VRLW +T + ++ ++W G
Sbjct: 100 LTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGL 159
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L +G G + W +GK + GH + + P + +R + G
Sbjct: 160 FLAAGCNDGSIWMWSLPSGKVV-QVMYGHTAPVNAGKFIPPGVG---KRLATVDDSGTLI 215
Query: 224 IWD--VSLRKCVICLSGHTL----AVTCVKW-----GGDG-VIYTGSQDCTIKVWETTQG 271
+W+ +C + H T W +G V++ G +KV
Sbjct: 216 VWNPATGAPECRMSSDDHRFDPGNEETAAGWTSFDCNAEGNVLFLGGSSGKVKVVNINSS 275
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-----KIK 325
++ L+ V ++AL T + + D T Y S + +L K
Sbjct: 276 HILASLEAQTESVEAIALCTALPICACASVDGTVALYDSASLKFRKSLPHEQAVIDCKFL 335
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
N P L++ D + W+ S Q TGHQ+ + + +PDG+ V + S D +
Sbjct: 336 PNTPY-LLTACADCVIRKWDVR-SGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELL 393
Query: 386 LWN 388
+++
Sbjct: 394 VFD 396
Score = 163 (62.4 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 37/141 (26%), Positives = 71/141 (50%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG- 392
SG D ++W+ +Q ++TGH+ + + +S DG ++A+ D ++LW +TG
Sbjct: 79 SGGGDDLGYIWDITTGEQI-CQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGF 137
Query: 393 KFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 452
+F+ F V + +SW L +G D ++ +W + + K+ Q + GH V A +
Sbjct: 138 EFITAFET-VDEIVWLSWHPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKF 196
Query: 453 SPDG--EKVASGGKDRVLKLW 471
P G +++A+ L +W
Sbjct: 197 IPPGVGKRLATVDDSGTLIVW 217
Score = 136 (52.9 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 398 FRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDG 456
F H V+ +S + S L SG D +WDI T + L GH D + A+DWS DG
Sbjct: 57 FFEHKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDG 116
Query: 457 EKVASGGKDRVLKLW 471
+A+GG D ++LW
Sbjct: 117 TYIATGGMDSQVRLW 131
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 359 HQQLVNHVYFSP-DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLL 417
H+ V V +P AS D +W+ TTG+ + GH + I WS D +
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+G DS +++W T DE+ + W P G +A+G D + +W
Sbjct: 120 ATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGLFLAAGCNDGSIWMW 173
Score = 109 (43.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
A AS D ++ L++ + KF H V + ++ LL+ D ++ WD+R+ +
Sbjct: 301 ACASVDGTVALYDSASLKFRKSLP-HEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQ 359
Query: 436 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
L + GH + + + +PDG++V +G D L
Sbjct: 360 LLGEYTGHQEPILCMAITPDGKRVVTGSDDTEL 392
Score = 105 (42.0 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ L++ A K K+ H+Q V F P+ ++ +A D I+ W+ +G+ +
Sbjct: 304 SVDGTVALYDSASLKFRKS--LPHEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLL 361
Query: 396 AVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
+ GH P+ ++ + D + +++GS D+ L V+D
Sbjct: 362 GEYTGHQEPILCMAITPDGKRVVTGSDDTELLVFD 396
Score = 94 (38.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 41/156 (26%), Positives = 68/156 (43%)
Query: 245 CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHT 303
C GGD + Y +W+ T G+ I +L GH + ++ S + + TG D
Sbjct: 77 CASGGGDDLGY---------IWDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQ 127
Query: 304 GKQYSSPEEMKK-AALERYNKIKGNA--PERL--VSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + S + A E ++I + P+ L +G +D ++++W K + M G
Sbjct: 128 VRLWKSSTGFEFITAFETVDEIVWLSWHPKGLFLAAGCNDGSIWMWSLPSGKVVQV-MYG 186
Query: 359 HQQLVNHVYFSPDGQWVASASFDKS--IKLWNGTTG 392
H VN F P G A+ D S + +WN TG
Sbjct: 187 HTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNPATG 222
Score = 77 (32.2 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 37/158 (23%), Positives = 66/158 (41%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA--SFD----KS 383
+RL + D T+ +W PA P+ RM+ +H F P + A+ SFD +
Sbjct: 203 KRLATVDDSGTLIVWNPATGA-PECRMSSD----DH-RFDPGNEETAAGWTSFDCNAEGN 256
Query: 384 IKLWNGTTGKF--VAVFRGHV--------GPVYQISWSADSRLLLSGSKDSTLKVWDIRT 433
+ G++GK V + H+ V I+ + S D T+ ++D +
Sbjct: 257 VLFLGGSSGKVKVVNINSSHILASLEAQTESVEAIALCTALPICACASVDGTVALYDSAS 316
Query: 434 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
K ++ LP H V + P+ + + D V++ W
Sbjct: 317 LKFRKSLP-HEQAVIDCKFLPNTPYLLTACADCVIRKW 353
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 180 (68.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 46/141 (32%), Positives = 74/141 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
L +GS D T LW A+ + Q +GH++ + +V FSP Q +A+AS D +IKLW
Sbjct: 494 LATGSQDRTAKLW--ALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKLWALQ 551
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 450
+ F GH V ++++ + LLS D LK+W I++ + + L H D+V+ +
Sbjct: 552 DFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKVWGL 611
Query: 451 DWSPDGEKVASGGKDRVLKLW 471
S + +GG D + LW
Sbjct: 612 HCSRLDDHAITGGSDSRIILW 632
Score = 170 (64.9 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 332 LVSGSDDFTMFLW---EPAVSK-----------QPKTRMTGHQQLVNHVYFSPDGQWVAS 377
LV+GS D T+ LW E SK Q ++ H + +N + SP+ + +A+
Sbjct: 437 LVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLAT 496
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLK 437
S D++ KLW + + VF GH ++ + +S ++L + S D T+K+W ++
Sbjct: 497 GSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCL 556
Query: 438 QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ GH V V + G ++ S G D +LKLW
Sbjct: 557 KTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLW 590
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC---- 146
VF ++ + C + GHT+ VL++ G AS + D ++R+W +N + C
Sbjct: 361 VFELQTL-ACQI-LHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMN-KAGQVACVAQG 417
Query: 147 TGHKNWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLS-GHKKWITGISWEPV 204
+GH + V I S LV+GS+ ++ W PS N S G + S +
Sbjct: 418 SGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRC 477
Query: 205 H---LNA----PCRRFVSA-SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGG-DGV 253
H +N+ P + ++ S+D A++W +L +C + SGH + V++ D V
Sbjct: 478 HDKDINSLAVSPNDKLLATGSQDRTAKLW--ALPQCQLLGVFSGHRRGLWNVQFSPTDQV 535
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGH 280
+ T S D TIK+W ++ +GH
Sbjct: 536 LATASADGTIKLWALQDFSCLKTFEGH 562
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 65/257 (25%), Positives = 109/257 (42%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDL-------NTQT-----PM-FK 145
C A +GHT +V ++ S L +GS D TV+LW L NT + P+ +
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQ 472
Query: 146 CTG--HKNWVLCIAWSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWE 202
T H + +A S + K L +GS+ + W PQ + G SGH++ + + +
Sbjct: 473 STQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQC-QLLG-VFSGHRRGLWNVQFS 530
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDC 261
P + +AS DG ++W + C+ GH +V V + G + + D
Sbjct: 531 PTD-----QVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDG 585
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALST--EYALRTGAFDHT---GKQYSSPEEMKKA 316
+K+W + +R L H V L S ++A+ TG D K + E+ ++
Sbjct: 586 LLKLWTIKSNECVRTLDAHEDKVWGLHCSRLDDHAI-TGGSDSRIILWKDVTEAEQAEEQ 644
Query: 317 ALERYNKIKGNAPERLV 333
A IK + L+
Sbjct: 645 AKREEQVIKQQELDNLL 661
Score = 129 (50.5 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 30/115 (26%), Positives = 59/115 (51%)
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD-SRLL 417
H V + F +A+ D ++++W+ FRG G V+ +++ D +RLL
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 418 L-SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L S + D++++VW ++ + L H V ++ +S DG + S G+D++ +W
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVW 222
Score = 124 (48.7 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 45/189 (23%), Positives = 86/189 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLA--SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
G V VAF PD +L S + DT++R+W L ++ + T H + V +++S DG
Sbjct: 149 GSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGH 208
Query: 164 HLVSGSKAGELQCWDPQTGKPSGN-PLSGHKKWITGISWEP---VHLNAPCRRFVSASKD 219
++S + WD ++ + S P+ + + EP + + F++A
Sbjct: 209 TMLSSGRDKICIVWDLRSYETSRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQ 268
Query: 220 GDARIWDVSLRKCVIC---LSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
G R+W+ + +CV +SG +T C G++ T + D + ++E +L +
Sbjct: 269 GILRVWEAASGQCVYTQPQMSGLRQELTHCTLARAAGLLLTVTADHNLLLYEARSLQLQK 328
Query: 276 ELKGHGHWV 284
+ G+ V
Sbjct: 329 QFAGYSEEV 337
Score = 123 (48.4 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 40/120 (33%), Positives = 58/120 (48%)
Query: 213 FVSASKDGDARIWDVSLRKCVICL---SGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWE 267
F S +KD RIW ++ V C+ SGHT +V C + + TGSQDCT+K+W
Sbjct: 391 FASCAKDQSIRIWRMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWP 450
Query: 268 ----------TTQGKLI-----RELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPE 311
+ G LI + H +NSLA+S + L TG+ D T K ++ P+
Sbjct: 451 LPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQ 510
Score = 122 (48.0 bits), Expect = 0.00051, P = 0.00051
Identities = 37/136 (27%), Positives = 63/136 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA--SASFDKSIKLWNG 389
L +G D + +W+ V G +V+ V F PD + S++ D SI++W+
Sbjct: 124 LATGGCDGAVRVWD-IVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSL 182
Query: 390 TTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
+AV H V +S+S D +LS +D VWD+R+ + + +P + V A
Sbjct: 183 QDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSYETSRTVPVF-ESVEA 241
Query: 450 VDWSPDGEKVASGGKD 465
P+ +A G K+
Sbjct: 242 SVLLPEEPALALGVKN 257
Score = 94 (38.1 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 45/195 (23%), Positives = 83/195 (42%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-QT----PMFKCTGH----- 149
C A + H AV S++FS DG + S D +WDL + +T P+F+
Sbjct: 187 CLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSYETSRTVPVFESVEASVLLP 246
Query: 150 KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGK-PSGNP-LSGHKKWITGISWEPVHLN 207
+ L + G H ++ G L+ W+ +G+ P +SG ++ +T + L
Sbjct: 247 EEPALALGVKNSGLHFLTAGDQGILRVWEAASGQCVYTQPQMSGLRQELTHCT-----LA 301
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKV 265
++ + D + +++ + +G++ V V++ G D I S +KV
Sbjct: 302 RAAGLLLTVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKV 361
Query: 266 WETTQGKLIRELKGH 280
+E Q + L GH
Sbjct: 362 FEL-QTLACQILHGH 375
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 229 (85.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 74/269 (27%), Positives = 121/269 (44%)
Query: 214 VSASKDGDARIWDVSLRKCVI--CLSGHTLAVTCVKWGGDGVIYTGSQ-DCTIKVWETTQ 270
+S S D ++W + K + L GH L V V G I S D I++W+
Sbjct: 36 ISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLET 95
Query: 271 GKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQ--YSSPEEMKKAALERYNKIK-- 325
GK I+ + SLA S + L TG+ H GK + K+ +L+ K
Sbjct: 96 GKQIKSIDAGPVDAWSLAFSPDSQFLATGS--HVGKVNIFGVETGKKEYSLDTRGKFILS 153
Query: 326 -GNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+P+ L SG+ D + +++ A K T + GH + + FSPD Q + +AS D
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHT-LEGHAMPIRSLTFSPDSQLLVTASDDG 212
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 442
IK+++ GH V +++ D +S S D ++KVWD T+
Sbjct: 213 YIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFD 272
Query: 443 HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H D+V+ V ++ G K+ S G D+ + ++
Sbjct: 273 HQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 226 (84.6 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 69/249 (27%), Positives = 120/249 (48%)
Query: 239 HTLAVTCVKWG-----GDGVIYTGSQDCTIKVWETTQGKLIRE--LKGHGHWVNSLALS- 290
H A+ V WG G + +GS D +KVW+ KL + L+GH V S+ +S
Sbjct: 15 HDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 291 TEYALRTGAFD-H-------TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
T + + D H TGKQ S + ++ ++ + L +GS +
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKS---IDAGPVDAWSLAFSPDSQFLATGSHVGKVN 131
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
++ K+ + T + +++ Y SPDG+++AS + D I +++ TGK + GH
Sbjct: 132 IFGVETGKKEYSLDTRGKFILSIAY-SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 403 GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 462
P+ +++S DS+LL++ S D +K++D++ L L GH V V + PD S
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSS 250
Query: 463 GKDRVLKLW 471
D+ +K+W
Sbjct: 251 SSDKSVKVW 259
Score = 209 (78.6 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 50/158 (31%), Positives = 82/158 (51%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WD R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHGSWVLNVAFCPDDTH-----FVSSSSDKSVKVWDAGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G G I + D I +++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 189 (71.6 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 66/221 (29%), Positives = 107/221 (48%)
Query: 48 NEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGH 107
N+EKL + + H+L V S H S+ S+ + ++ + + + AG
Sbjct: 50 NDEKLDLQWTLEGHQLGVV--SVDISHTGSIAASSSLDAHIR-LWDLETGKQIKSIDAGP 106
Query: 108 TEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVS 167
+A S+AFSPD + LA+GS V ++ + T + ++L IA+S DGK+L S
Sbjct: 107 VDA-WSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 168 GSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
G+ G + +D TGK + L GH I +++ P + V+AS DG +I+DV
Sbjct: 166 GAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKIYDV 219
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
LSGH V V + D + + S D ++KVW+
Sbjct: 220 QHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 164 (62.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 69/294 (23%), Positives = 125/294 (42%)
Query: 149 HKNWVLCIAWSA---DGKH-LVSGSKAGELQCWDPQTGKPSGN-PLSGHKKWITGISWEP 203
H + + +AW DG ++SGS ++ W K L GH+ + +S +
Sbjct: 15 HDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGV--VSVDI 72
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
H + S+S D R+WD+ K + + + + + D + TGS
Sbjct: 73 SHTGSIA---ASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGK 129
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERY 321
+ ++ GK L G ++ S+A S + L +GA D + LE +
Sbjct: 130 VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 322 NK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
I+ +P+ LV+ SDD + +++ + T ++GH V +V F PD
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHGSWVLNVAFCPDDTHFV 248
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
S+S DKS+K+W+ T V F H V+ + ++ ++S D + ++D
Sbjct: 249 SSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 245 THFVSSSSDKSVKVWDAGT-RTCVHTFFDHQDQVWGVKY-----NGSGSKIVSVGDDQEI 298
Query: 223 RIWD 226
I+D
Sbjct: 299 HIYD 302
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ G +VS E+ +D
Sbjct: 275 DQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 189 (71.6 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 52/184 (28%), Positives = 87/184 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH++ V + F+ + L +GS DTT+++W +++ + TGH V + + D
Sbjct: 378 TFTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVF--DN 433
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ L+SG ++ W+ TG+ GH+ + + + N + VS S D
Sbjct: 434 QKLISGGLDSTIKVWNYHTGQCIAT-YRGHEDAVVSVDFT----N---KSIVSGSADHTV 485
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVK-WGGDGVIYTGSQDCTIKVWETTQGKLIRELKG-- 279
R+W V R C L GHT V VK I++ S D TI++W+ + I+ G
Sbjct: 486 RVWHVDSRTCYT-LRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGME 544
Query: 280 -HGH 282
+GH
Sbjct: 545 NNGH 548
Score = 185 (70.2 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 51/177 (28%), Positives = 84/177 (47%)
Query: 237 SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
+GH+ VTC+++ + TGS D TIK+W+ G+ ++ L GH V +L + L
Sbjct: 380 TGHSDGVTCLQFNRK-YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQ-KLI 437
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVSKQPK 353
+G D T K ++ A + + + +VSGS D T+ +W V +
Sbjct: 438 SGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWH--VDSRTC 495
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVF-----RGHVGPV 405
+ GH VNHV + SAS D +I++W+ + + + VF GH+G V
Sbjct: 496 YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQV 552
Score = 184 (69.8 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ + KT +TGH + V + F D Q + S D +IK+WN T
Sbjct: 396 LMTGSYDTTIKIWKIDSGECVKT-LTGHTKGVRALVF--DNQKLISGGLDSTIKVWNYHT 452
Query: 392 GKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 451
G+ +A +RGH V + ++ S ++SGS D T++VW + ++ L GH D V V
Sbjct: 453 GQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVWHVDSRTC-YTLRGHTDWVNHVK 509
Query: 452 WSPDGEKVASGGKDRVLKLW 471
+ S D +++W
Sbjct: 510 IHSASNTIFSASDDTTIRMW 529
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 38/119 (31%), Positives = 65/119 (54%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
KT TGH V + F+ +++ + S+D +IK+W +G+ V GH V + +
Sbjct: 377 KT-FTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVF-- 431
Query: 413 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
D++ L+SG DST+KVW+ T + GH D V +VD++ + + SG D +++W
Sbjct: 432 DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFT--NKSIVSGSADHTVRVW 488
Score = 159 (61.0 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 41/152 (26%), Positives = 75/152 (49%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GHT+ V ++ F D ++L SG D+T+++W+ +T + GH++ V+ + ++
Sbjct: 415 CVKTLTGHTKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFT 472
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
K +VSGS ++ W + L GH W+ + +H + SAS D
Sbjct: 473 --NKSIVSGSADHTVRVW--HVDSRTCYTLRGHTDWVNHVK---IH--SASNTIFSASDD 523
Query: 220 GDARIWDVSLRKCVICL-----SGHTLAVTCV 246
R+WD++ +C+ +GH V C+
Sbjct: 524 TTIRMWDMNSNECIKVFGGMENNGHIGQVQCI 555
Score = 142 (55.0 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 40/140 (28%), Positives = 69/140 (49%)
Query: 211 RRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETT 269
R+++ + S D +IW + +CV L+GHT V + + +I +G D TIKVW
Sbjct: 393 RKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQKLI-SGGLDSTIKVWNYH 451
Query: 270 QGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM---KKAALERYNKIK- 325
G+ I +GH V S+ T ++ +G+ DHT + + + + N +K
Sbjct: 452 TGQCIATYRGHEDAVVSVDF-TNKSIVSGSADHTVRVWHVDSRTCYTLRGHTDWVNHVKI 510
Query: 326 GNAPERLVSGSDDFTMFLWE 345
+A + S SDD T+ +W+
Sbjct: 511 HSASNTIFSASDDTTIRMWD 530
Score = 135 (52.6 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 41/165 (24%), Positives = 75/165 (45%)
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PE 330
I+ GH V L + +Y L TG++D T K + E K ++ +
Sbjct: 376 IKTFTGHSDGVTCLQFNRKY-LMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQ 434
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
+L+SG D T+ +W + T GH+ V V F+ + + S S D ++++W+
Sbjct: 435 KLISGGLDSTIKVWNYHTGQCIAT-YRGHEDAVVSVDFT--NKSIVSGSADHTVRVWH-V 490
Query: 391 TGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
+ RGH V + + S + S S D+T+++WD+ + +
Sbjct: 491 DSRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNE 535
Score = 127 (49.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C AT GH +AV+SV F+ + + SGS D TVR+W ++++T + GH +WV +
Sbjct: 454 QCIATYRGHEDAVVSVDFT--NKSIVSGSADHTVRVWHVDSRT-CYTLRGHTDWVNHVKI 510
Query: 159 SADGKHLVSGSKAGELQCWD 178
+ + S S ++ WD
Sbjct: 511 HSASNTIFSASDDTTIRMWD 530
Score = 113 (44.8 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
+++ D +IKLW+ TGK + GH+ V+ I+ AD+ ++SG+ D +KVWD++ K
Sbjct: 643 TSALDNTIKLWDVATGKCIRTQFGHIEGVWSIA--ADTFRIISGAHDRLIKVWDLQNGK 699
Score = 97 (39.2 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 418 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
L+ + D+T+K+WD+ T K + GH + V+++ + D ++ SG DR++K+W
Sbjct: 642 LTSALDNTIKLWDVATGKCIRTQFGHIEGVWSI--AADTFRIISGAHDRLIKVW 693
Score = 93 (37.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
F++++ D ++WDV+ KC+ GH V + +I +G+ D IKVW+ GK
Sbjct: 641 FLTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADTFRII-SGAHDRLIKVWDLQNGK 699
Query: 273 LIRELKGHGHWVNSLALS 290
+ + V+ + LS
Sbjct: 700 CLHTFSNNSS-VSCVGLS 716
Score = 86 (35.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT--PMF---KCTGHKNW 152
+R T+ GHT+ V V + S S DTT+R+WD+N+ +F + GH
Sbjct: 492 SRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQ 551
Query: 153 VLCI 156
V CI
Sbjct: 552 VQCI 555
Score = 81 (33.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
H ++ + ++ WD TGK GH I G+ W + A R +S + D +
Sbjct: 640 HFLTSALDNTIKLWDVATGKCIRTQF-GH---IEGV-WS---IAADTFRIISGAHDRLIK 691
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+WD+ KC+ S ++ +V+CV D G ++ +K++
Sbjct: 692 VWDLQNGKCLHTFSNNS-SVSCVGLS-DSRFVAGLENGEVKMY 732
Score = 77 (32.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD 301
T + D TIK+W+ GK IR GH V S+A T + + +GA D
Sbjct: 643 TSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADT-FRIISGAHD 687
Score = 76 (31.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 27/101 (26%), Positives = 52/101 (51%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
P ++ + D T+ LW+ A K +T+ GH + V + + D + S + D+ IK+W+
Sbjct: 638 PTHFLTSALDNTIKLWDVATGKCIRTQF-GHIEGVWSI--AADTFRIISGAHDRLIKVWD 694
Query: 389 GTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
GK + F + V + S DSR + +G ++ +K++
Sbjct: 695 LQNGKCLHTFSNN-SSVSCVGLS-DSRFV-AGLENGEVKMY 732
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 173 (66.0 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
R VS SDD ++ +WE + K + V SP+G+W+A S D I ++ G
Sbjct: 297 RFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIF-GA 355
Query: 391 TGKF----VAVFRGHV--GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
+F +F+GH+ G Q+ +S D ++SG + L +WD +T KL H
Sbjct: 356 QNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHD 415
Query: 445 DEVFAVDWSP-DGEKVASGGKDRVLKLW 471
W P + KV + G D ++KLW
Sbjct: 416 KVCIGAVWHPHETSKVITCGWDGLIKLW 443
Score = 162 (62.1 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S D + LWE ++ GH + V + F+ G SA++D+ +KLW+ T
Sbjct: 169 LLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTET 228
Query: 392 GKFVAVFRGHVGPVYQISWSADS---RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
G+ ++ F P Y + ++ D L ++G D + WDIR+ ++ Q+ H V
Sbjct: 229 GQCISRFTNRKVP-YCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVN 287
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
+ + + + S D+ L++W
Sbjct: 288 TIVFVDENRRFVSTSDDKSLRVW 310
Score = 136 (52.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 64/302 (21%), Positives = 115/302 (38%)
Query: 147 TGHKNWVLCIA-WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
+GH V + + G L+S S +++ W+ + GH K + I +
Sbjct: 150 SGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICF---- 205
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD----GVIYTGSQDC 261
N +F+SA+ D ++WD +C+ + + CVK+ D + G D
Sbjct: 206 -NTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAGMSDK 263
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGK---QYSSPEEMKKAAL 318
I W+ G++++E H VN++ E D ++ P + K A
Sbjct: 264 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAE 323
Query: 319 ERYNKIKGN--APER--LVSGSDDFTMFLW--EPAVSKQPKTRMTGHQQL--VNHVYFSP 370
+ + +P L S D + ++ + K GH V FSP
Sbjct: 324 PSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSP 383
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD--SRLLLSGSKDSTLKV 428
D +V S + + +W+ T K + F+ H W S+++ G D +K+
Sbjct: 384 DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-DGLIKL 442
Query: 429 WD 430
WD
Sbjct: 443 WD 444
Score = 123 (48.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
RC T GH++AV + F+ G Q S + D ++LWD T + + T K C+ +
Sbjct: 188 RCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKV-PYCVKF 246
Query: 159 SADG--KHL-VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ D ++L V+G ++ WD ++G+ H + I + V N RRFVS
Sbjct: 247 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIV-QEYDRHLGAVNTIVF--VDEN---RRFVS 300
Query: 216 ASKDGDARIWD 226
S D R+W+
Sbjct: 301 TSDDKSLRVWE 311
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 64/301 (21%), Positives = 124/301 (41%)
Query: 105 AGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAWSADG 162
+GHT+ V +V P G L S S D ++LW++ + GH V I ++ G
Sbjct: 150 SGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAG 209
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+S + L+ WD +TG+ ++K + + P FV+ D
Sbjct: 210 TQFLSAAYDRYLKLWDTETGQCISR--FTNRKVPYCVKFNPDEDKQ--NLFVAGMSDKKI 265
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWE---TTQGKLIRELK 278
WD+ + V H AV + + + + S D +++VWE K I E
Sbjct: 266 VQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPS 325
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMK--KAALERYNKIKGNA------PE 330
H +L+ + ++ L + D+ + + + K + + + + G A P+
Sbjct: 326 MHSMPAVTLSPNGKW-LACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPD 384
Query: 331 R--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL-VNHVYFSPDGQWVASASFDKSIKLW 387
++SG + + +W+ +K +R H ++ + V+ + V + +D IKLW
Sbjct: 385 MSYVISGDGNGKLNIWDWKTTKL-YSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 443
Query: 388 N 388
+
Sbjct: 444 D 444
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 173 (66.0 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
R VS SDD ++ +WE + K + V SP+G+W+A S D I ++ G
Sbjct: 300 RFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIF-GA 358
Query: 391 TGKF----VAVFRGHV--GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
+F +F+GH+ G Q+ +S D ++SG + L +WD +T KL H
Sbjct: 359 QNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHD 418
Query: 445 DEVFAVDWSP-DGEKVASGGKDRVLKLW 471
W P + KV + G D ++KLW
Sbjct: 419 KVCIGAVWHPHETSKVITCGWDGLIKLW 446
Score = 162 (62.1 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S D + LWE ++ GH + V + F+ G SA++D+ +KLW+ T
Sbjct: 172 LLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTET 231
Query: 392 GKFVAVFRGHVGPVYQISWSADS---RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
G+ ++ F P Y + ++ D L ++G D + WDIR+ ++ Q+ H V
Sbjct: 232 GQCISRFTNRKVP-YCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVN 290
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
+ + + + S D+ L++W
Sbjct: 291 TIVFVDENRRFVSTSDDKSLRVW 313
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 64/302 (21%), Positives = 115/302 (38%)
Query: 147 TGHKNWVLCIA-WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
+GH V + + G L+S S +++ W+ + GH K + I +
Sbjct: 153 SGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICF---- 208
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD----GVIYTGSQDC 261
N +F+SA+ D ++WD +C+ + + CVK+ D + G D
Sbjct: 209 -NTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAGMSDK 266
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGK---QYSSPEEMKKAAL 318
I W+ G++++E H VN++ E D ++ P + K A
Sbjct: 267 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAE 326
Query: 319 ERYNKIKGN--APER--LVSGSDDFTMFLW--EPAVSKQPKTRMTGHQQL--VNHVYFSP 370
+ + +P L S D + ++ + K GH V FSP
Sbjct: 327 PSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSP 386
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD--SRLLLSGSKDSTLKV 428
D +V S + + +W+ T K + F+ H W S+++ G D +K+
Sbjct: 387 DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW-DGLIKL 445
Query: 429 WD 430
WD
Sbjct: 446 WD 447
Score = 123 (48.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
RC T GH++AV + F+ G Q S + D ++LWD T + + T K C+ +
Sbjct: 191 RCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKV-PYCVKF 249
Query: 159 SADG--KHL-VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ D ++L V+G ++ WD ++G+ H + I + V N RRFVS
Sbjct: 250 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIV-QEYDRHLGAVNTIVF--VDEN---RRFVS 303
Query: 216 ASKDGDARIWD 226
S D R+W+
Sbjct: 304 TSDDKSLRVWE 314
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 64/301 (21%), Positives = 124/301 (41%)
Query: 105 AGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAWSADG 162
+GHT+ V +V P G L S S D ++LW++ + GH V I ++ G
Sbjct: 153 SGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAG 212
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+S + L+ WD +TG+ ++K + + P FV+ D
Sbjct: 213 TQFLSAAYDRYLKLWDTETGQCISR--FTNRKVPYCVKFNPDEDKQ--NLFVAGMSDKKI 268
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWE---TTQGKLIRELK 278
WD+ + V H AV + + + + S D +++VWE K I E
Sbjct: 269 VQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPS 328
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMK--KAALERYNKIKGNA------PE 330
H +L+ + ++ L + D+ + + + K + + + + G A P+
Sbjct: 329 MHSMPAVTLSPNGKW-LACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPD 387
Query: 331 R--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL-VNHVYFSPDGQWVASASFDKSIKLW 387
++SG + + +W+ +K +R H ++ + V+ + V + +D IKLW
Sbjct: 388 MSYVISGDGNGKLNIWDWKTTKL-YSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 446
Query: 388 N 388
+
Sbjct: 447 D 447
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 246 (91.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 88/335 (26%), Positives = 154/335 (45%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ + + + +++GS + W + GK S + GH + ++W
Sbjct: 96 QCLFHDDWISSVRGAEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAWVKK 151
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
N C +S+S D +W+ ++ K + C GH +V + G + +GS
Sbjct: 152 D-NLSCL-LLSSSMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAAL 318
D +K+W EL+ + + + L RT +G +
Sbjct: 210 DKMLKIWSAVPTDEEDELEEPTNRPRKKQKTEQLGLTRTPIVTLSGHK------------ 257
Query: 319 ERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
E + + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS
Sbjct: 258 EAISSVLWSDAEEICSASWDHTIRVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASG 315
Query: 379 SFDKSIKLWNGTT--GKFVAV-FRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQ 434
S D+ I+LW+ T G V++ H G V + WS + L+SGS D+ +K+WD R+
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWDTRSC 375
Query: 435 KLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
K DL H D+V +VDW+ G + SGG D L
Sbjct: 376 KAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNKL 409
Score = 231 (86.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 53/161 (32%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EA+ SV +S D ++ S S D T+R+WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 231 (86.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 83/320 (25%), Positives = 151/320 (47%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + EL+ + T P H WI+ + + ++ S D +RIW
Sbjct: 75 ISSEEVVELEYVEKYTA-PQPEQCLFHDDWISSVRGAEEWI-------LTGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + + S D TI +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCC 185
Query: 278 KGHGHWVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
+GH V+S+A+ ST +G++D K +S+ ++ LE N P +
Sbjct: 186 RGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWSAVPTDEEDELEEPT----NRPRKKQKTE 241
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
+ +++ P ++GH++ ++ V +S D + + SAS+D +I++W+ +G +
Sbjct: 242 --------QLGLTRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVESGSLKS 292
Query: 397 VFRGHVGPVYQ-ISWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDW 452
G+ V+ IS+S + L SGS D +++WD RT+ + L H V ++ W
Sbjct: 293 TLTGN--KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKW 350
Query: 453 SPDGEK-VASGGKDRVLKLW 471
SP E+ + SG D ++KLW
Sbjct: 351 SPTHEQQLISGSLDNIVKLW 370
Score = 171 (65.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 53/176 (30%), Positives = 87/176 (49%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GHK + + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT +KW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 135 (52.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 228 (85.3 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 73/292 (25%), Positives = 128/292 (43%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI--CLSGHTLAVTCVKWG 249
H I ++W + V+ S D ++W K + L GH L V V
Sbjct: 15 HDDAIWSVAWGS-NKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDIS 73
Query: 250 GD-GVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTEYALRTGAFDHTGKQ 306
+ + S D I++W+ GK I+ + W + + ++Y L TG H GK
Sbjct: 74 HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY-LATGT--HVGKV 130
Query: 307 --YSSPEEMKKAALERYNKIK---GNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
+ K+ +L+ K +P+ L SG+ D + +++ A K T + GH
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT-LEGH 189
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
+ + FSPD Q + +AS D IK+++ GH V +++ D +S
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS 249
Query: 420 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S D ++KVWD+ T+ H D+V+ V ++ +G K+ S G D+ + ++
Sbjct: 250 SSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G+G I + D I +++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 181 (68.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSA 160
++ GH V+SV S AS S D +RLWDL Q W L A+S
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL--AFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D ++L +G+ G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLA 288
H WV ++A
Sbjct: 231 HASWVLNVA 239
Score = 177 (67.4 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 217 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 161 (61.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 69/306 (22%), Positives = 131/306 (42%)
Query: 138 NTQTPMFKCT-GHKNWVLCIAWSADGKH----LVSGSKAGELQCWDPQTGKPSGN-PLSG 191
N + +FK H + + +AW ++ K +V+GS ++ W + K L G
Sbjct: 3 NQYSILFKQEQAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEG 62
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
H+ + + + P S+S D R+WD+ K + + + + + D
Sbjct: 63 HQLGVVSVD---ISHTLPIA--ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPD 117
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSS 309
+ TG+ + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 118 SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 310 PEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
LE + I+ +P+ LV+ SDD + +++ + T ++GH V
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWVL 236
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+V F PD S+S DKS+K+W+ T V F H V+ + ++ + ++S D
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Query: 425 TLKVWD 430
+ ++D
Sbjct: 297 EIHIYD 302
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 245 THFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
I+D
Sbjct: 299 HIYD 302
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ +G +VS E+ +D
Sbjct: 275 DQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 228 (85.3 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 72/292 (24%), Positives = 129/292 (44%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI--CLSGHTLAVTCVKWG 249
H I ++WE + V+ S D ++W + + L GH L V V
Sbjct: 15 HDDAIWSVAWE-TNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDIS 73
Query: 250 GD-GVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTEYALRTGAFDHTGKQ 306
+ + S D I++W+ GK ++ + W + + ++Y L TG H GK
Sbjct: 74 HTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQY-LATGT--HMGKV 130
Query: 307 --YSSPEEMKKAALERYNKIK---GNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
+ K+ +L+ K +P+ L SG+ D + +++ A K T + GH
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT-LEGH 189
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
+ + FSPD Q + +AS D IK+++ GH V +++ D +S
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVS 249
Query: 420 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
S D ++KVWD+ T+ H D+V+ V ++ +G K+ S G D+ + ++
Sbjct: 250 SSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 215 (80.7 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
C+ H V VK+ G+G I + D I V++
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 54/189 (28%), Positives = 90/189 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKN-WVLCIAWSA 160
++ GH V+SV S AS S D +RLWDL M G + W L A+S
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTL--AFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D ++L +G+ G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSQYLATGTHMGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLA 288
H WV ++A
Sbjct: 231 HASWVLNVA 239
Score = 177 (67.4 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 217 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 68/306 (22%), Positives = 130/306 (42%)
Query: 138 NTQTPMFKCT-GHKNWVLCIAWSADGKH----LVSGSKAGELQCWDPQTGKPSGN-PLSG 191
N + +FK H + + +AW + K +V+GS ++ W + + L G
Sbjct: 3 NQYSILFKQEQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEG 62
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
H+ + + + P S+S D R+WD+ K + + + + + D
Sbjct: 63 HQLGVVSVD---ISHTLPIA--ASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPD 117
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSS 309
+ TG+ + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 118 SQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 310 PEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
LE + I+ +P+ LV+ SDD + +++ + T ++GH V
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWVL 236
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDS 424
+V F PD S+S DKS+K+W+ T + F H V+ + ++ + ++S D
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Query: 425 TLKVWD 430
+ V+D
Sbjct: 297 EIHVYD 302
Score = 145 (56.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 245 THFVSSSSDKSVKVWDVGT-RTCIHTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ +G +VS E+ +D
Sbjct: 275 DQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 248 (92.4 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 75/250 (30%), Positives = 130/250 (52%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL 287
SL++ + C S + V C+++ D I +G +D TIK+W+ + + R L GH V L
Sbjct: 193 SLQR-IHCRSETSKGVYCLQYD-DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCL 250
Query: 288 ALSTEYALRTGAFDHTGKQYS-SPEEMKKAAL---ERYNKIKGNAPERLVSGSDDFTMFL 343
E + TG+ D T + + + EM + E ++ N +V+ S D ++ +
Sbjct: 251 QYD-ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAV 308
Query: 344 WEPAVSKQPKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
W+ A R + GH+ VN V F D +++ SAS D++IK+WN +T +FV GH
Sbjct: 309 WDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH 366
Query: 402 VGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
+ + + RL++SGS D+T+++WDI + L GH + V + + D +++ S
Sbjct: 367 KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS 422
Query: 462 GGKDRVLKLW 471
G D +K+W
Sbjct: 423 GAYDGKIKVW 432
Score = 223 (83.6 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 72/271 (26%), Positives = 130/271 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + ++
Sbjct: 236 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 293
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 294 -NGM-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 344
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W+ S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 345 GDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 403
Query: 278 KGHGHWVNSLALSTEYALRTGAFDHTGKQYS-----SPEEMK-----KAALERYNKI-KG 326
+GH V + + + +GA+D K + P + +E ++ +
Sbjct: 404 EGHEELVRCIRFDNKRIV-SGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRL 462
Query: 327 NAPE-RLVSGSDDFTMFLWE----PAVSKQP 352
E ++VS S D T+ +W+ PA +P
Sbjct: 463 QFDEFQIVSSSHDDTILIWDFLNDPAAQAEP 493
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 72/276 (26%), Positives = 134/276 (48%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQ 270
++ VS +D +IWD S +C L+GHT +V C+++ + VI TGS D T++VW+
Sbjct: 215 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRVWDVNT 273
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY--SSPEEMKKAALERYNKIKGNA 328
G+++ L H V L + + T + D + + +SP ++ + ++ N
Sbjct: 274 GEMLNTLIHHCEAVLHLRFNNGMMV-TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 332
Query: 329 PE----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I
Sbjct: 333 VDFDDKYIVSASGDRTIKVWNTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTI 389
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI------RTQK--- 435
+LW+ G + V GH V I + D++ ++SG+ D +KVWD+ R
Sbjct: 390 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTL 447
Query: 436 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ L H+ VF + + D ++ S D + +W
Sbjct: 448 CLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 481
Score = 215 (80.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 77/286 (26%), Positives = 133/286 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D +++ SG D T+++WD +T TGH VLC+ + D + +++GS ++ WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD 270
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 271 VNTGEML-NTLIHHCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV 322
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 323 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR 378
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 379 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLIAA 437
Query: 350 KQPKTRMTGH---QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ G + LV H V+ D + S+S D +I +W+
Sbjct: 438 LDPRAP-AGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 482
Score = 198 (74.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 79/306 (25%), Positives = 138/306 (45%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V C+ + D + +VSG + ++ WD T + L+GH + + ++ R
Sbjct: 207 VYCLQY--DDQKIVSGLRDNTIKIWDKSTLECK-RILTGHTGSVLCLQYDE-------RV 256
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET---T 269
++ S D R+WDV+ + + L H AV +++ +G++ T S+D +I VW+ T
Sbjct: 257 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPT 315
Query: 270 QGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
L R L GH VN + +Y + D T K +++ L + + G A
Sbjct: 316 DITLRRVLVGHRAAVNVVDFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKR--GIAC 372
Query: 329 ---PERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+RLV SGS D T+ LW+ + + GH++LV + F D + + S ++D I
Sbjct: 373 LQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRF--DNKRIVSGAYDGKI 429
Query: 385 KLWN--------GTTGKF-VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
K+W+ G + H G V+++ + D ++S S D T+ +WD
Sbjct: 430 KVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 487
Query: 436 LKQDLP 441
Q P
Sbjct: 488 AAQAEP 493
Score = 175 (66.7 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 54/194 (27%), Positives = 94/194 (48%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ I + R+ VN T+ H EAVL + F+ +G + + S D ++ +WD
Sbjct: 254 ERVI-ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWD 310
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W+ T + L+GHK
Sbjct: 311 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHK 367
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 368 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 420
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 421 V-SGAYDGKIKVWD 433
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 248 (92.4 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 75/250 (30%), Positives = 130/250 (52%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL 287
SL++ + C S + V C+++ D I +G +D TIK+W+ + + R L GH V L
Sbjct: 193 SLQR-IHCRSETSKGVYCLQYD-DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCL 250
Query: 288 ALSTEYALRTGAFDHTGKQYS-SPEEMKKAAL---ERYNKIKGNAPERLVSGSDDFTMFL 343
E + TG+ D T + + + EM + E ++ N +V+ S D ++ +
Sbjct: 251 QYD-ERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAV 308
Query: 344 WEPAVSKQPKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
W+ A R + GH+ VN V F D +++ SAS D++IK+WN +T +FV GH
Sbjct: 309 WDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH 366
Query: 402 VGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
+ + + RL++SGS D+T+++WDI + L GH + V + + D +++ S
Sbjct: 367 KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS 422
Query: 462 GGKDRVLKLW 471
G D +K+W
Sbjct: 423 GAYDGKIKVW 432
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 71/276 (25%), Positives = 133/276 (48%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQ 270
++ VS +D +IWD S +C L+GHT +V C+++ + VI TGS D T++VW+
Sbjct: 215 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRVWDVNA 273
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY--SSPEEMKKAALERYNKIKGNA 328
G+++ L H V L + + T + D + + +SP ++ + ++ N
Sbjct: 274 GEMLNTLIHHCEAVLHLRFNNGMMV-TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 332
Query: 329 PE----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I
Sbjct: 333 VDFDDKYIVSASGDRTIKVWNTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTI 389
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK--------- 435
+LW+ G + V GH V I + D++ ++SG+ D +KVWD+
Sbjct: 390 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTL 447
Query: 436 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ L H+ VF + + D ++ S D + +W
Sbjct: 448 CLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 481
Score = 217 (81.4 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 58/204 (28%), Positives = 104/204 (50%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+N + H VL + ++
Sbjct: 236 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 293
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 294 -NGM-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 344
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W+ S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 345 GDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 403
Query: 278 KGHGHWVNSLALSTEYALRTGAFD 301
+GH V + + + +GA+D
Sbjct: 404 EGHEELVRCIRFDNKRIV-SGAYD 426
Score = 210 (79.0 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 76/286 (26%), Positives = 132/286 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D +++ SG D T+++WD +T TGH VLC+ + D + +++GS ++ WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD 270
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
G+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 271 VNAGEML-NTLIHHCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV 322
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 323 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR 378
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 379 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAA 437
Query: 350 KQPKTRMTGH---QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ G + LV H V+ D + S+S D +I +W+
Sbjct: 438 LDPRAP-AGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 482
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 77/295 (26%), Positives = 136/295 (46%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V C+ + D + +VSG + ++ WD T + L+GH + + ++ R
Sbjct: 207 VYCLQY--DDQKIVSGLRDNTIKIWDKSTLECK-RILTGHTGSVLCLQYDE-------RV 256
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET---T 269
++ S D R+WDV+ + + L H AV +++ +G++ T S+D +I VW+ T
Sbjct: 257 IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPT 315
Query: 270 QGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
L R L GH VN + +Y + D T K +++ L + + G A
Sbjct: 316 DITLRRVLVGHRAAVNVVDFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKR--GIAC 372
Query: 329 ---PERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+RLV SGS D T+ LW+ + + GH++LV + F D + + S ++D I
Sbjct: 373 LQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRF--DNKRIVSGAYDGKI 429
Query: 385 KLWN--------GTTGKF-VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD 430
K+W+ G + H G V+++ + D ++S S D T+ +WD
Sbjct: 430 KVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 482
Score = 175 (66.7 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 54/194 (27%), Positives = 94/194 (48%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ I + R+ VN T+ H EAVL + F+ +G + + S D ++ +WD
Sbjct: 254 ERVI-ITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWD 310
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W+ T + L+GHK
Sbjct: 311 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHK 367
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 368 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 420
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 421 V-SGAYDGKIKVWD 433
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 234 (87.4 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 82/306 (26%), Positives = 144/306 (47%)
Query: 148 GHKNWVLCIAWSADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EP 203
GH +WV ++ D K +VS S+ +L W+ T SG + KK +TG S
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGE-IGTAKKSLTGHSQAIND 77
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
V +++ +S S D R+WD+SL + + GHT V V + D I + S+D T
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 263 IKVWET-TQGKLIRELKGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPE-EMKKAA 317
IK+W T Q K + H W+ + S + + + +D K ++ ++ K
Sbjct: 138 IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN- 196
Query: 318 LERYNKIKGN---APERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
LE + + +P+ + SG D LW+ K + TG +N + FSP
Sbjct: 197 LEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCD 254
Query: 373 QWVASASFDKSIKLWNGTTGKFVA----VFRGHVGPVY--QISWSADSRLLLSGSKDSTL 426
W+ +A+ D+ I++WN + ++ V + +G + ++WSA+ +LL GS D +
Sbjct: 255 YWLCAAT-DRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNI 313
Query: 427 KVWDIR 432
V++++
Sbjct: 314 YVYEVK 319
Score = 215 (80.7 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 52/142 (36%), Positives = 79/142 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SGS D ++ LW+ ++ + ++ GH V V FSPD + + SAS DK+IKLWN
Sbjct: 88 LSGSWDHSVRLWDLSLGETIRS-FIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ 146
Query: 393 -KFVAVFRGHVGPV--YQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
K+ + H + + S S + +++S D +KVW+++ L ++L GH +
Sbjct: 147 CKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNT 206
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
V SPDG ASGGKD V KLW
Sbjct: 207 VTISPDGSLCASGGKDGVAKLW 228
Score = 214 (80.4 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 48/149 (32%), Positives = 79/149 (53%)
Query: 332 LVSGSDDFTMFLWEPAVSKQP------KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+VS S D + +W K +TGH Q +N V S DG + S S+D S++
Sbjct: 38 IVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVR 97
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ-KLKQDLPGHA 444
LW+ + G+ + F GH V+ +S+S D+R ++S S+D T+K+W+ Q K H
Sbjct: 98 LWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHT 157
Query: 445 DEVFAVDWSPDGEK--VASGGKDRVLKLW 471
D + V +SP + + S G D+++K+W
Sbjct: 158 DWITCVRFSPSPNQAIIVSCGWDKLVKVW 186
Score = 210 (79.0 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 57/197 (28%), Positives = 94/197 (47%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+ ++ GH++A+ V+ S DG SGS D +VRLWDL+ + GH + V +
Sbjct: 61 IGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSV 120
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
++S D + +VS S+ ++ W+ H WIT + + P A VS
Sbjct: 121 SFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAI---IVSC 177
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
D ++W+ L+ C + L GHT + V DG + +G +D K+W+ +GK
Sbjct: 178 GWDKLVKVWN--LKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKH 235
Query: 274 IRELKGHGHWVNSLALS 290
+ L+ G +NSL S
Sbjct: 236 LYSLET-GSTINSLCFS 251
Score = 189 (71.6 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 61/229 (26%), Positives = 110/229 (48%)
Query: 106 GHTEAVLSVAFSPDGR--QLASGSGDTTVRLWDLNTQ-------TPMFKCTGHKNWVLCI 156
GH++ V SV+ D + + S S D + +W++NT T TGH + +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ S+DG +SGS ++ WD G+ + + GH + +S+ P + R+ VSA
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-GHTSDVFSVSFSPDN-----RQIVSA 132
Query: 217 SKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQG 271
S+D ++W+ +L +C ++ HT +TCV++ +I + D +KVW
Sbjct: 133 SRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNC 191
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
L + L+GH +N++ +S + +L +G D K + E +LE
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLE 240
Score = 180 (68.4 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 67/298 (22%), Positives = 135/298 (45%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS-------LRKCVICLSGHTLAV 243
GH W+T +S P + + VSAS+D +W+++ + L+GH+ A+
Sbjct: 19 GHSDWVTSVS-TPT--DPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG+ +GS D ++++W+ + G+ IR GH V S++ S + + + + D
Sbjct: 76 NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRD 135
Query: 302 HTGKQYSSPEEMKKAALERYNK-----IKGN-APER--LVSGSDDFTMFLWEPAVSKQPK 353
T K +++ + K ++ + ++ + +P + +VS D + +W K
Sbjct: 136 KTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNK 195
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD 413
+ GH ++N V SPDG AS D KLW+ GK + + G +
Sbjct: 196 N-LEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHL--YSLETGSTINSLCFSP 252
Query: 414 SRLLLSGSKDSTLKVWDIRTQKLKQDL-PGHADEV-----FAVDWSPDGEKVASGGKD 465
L + D +++W++ ++ + ++ P ++ ++ WS +G+ + G D
Sbjct: 253 CDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTD 310
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 234 (87.4 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 82/306 (26%), Positives = 144/306 (47%)
Query: 148 GHKNWVLCIAWSADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EP 203
GH +WV ++ D K +VS S+ +L W+ T SG + KK +TG S
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGE-IGTAKKSLTGHSQAIND 77
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
V +++ +S S D R+WD+SL + + GHT V V + D I + S+D T
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 263 IKVWET-TQGKLIRELKGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPE-EMKKAA 317
IK+W T Q K + H W+ + S + + + +D K ++ ++ K
Sbjct: 138 IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN- 196
Query: 318 LERYNKIKGN---APERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
LE + + +P+ + SG D LW+ K + TG +N + FSP
Sbjct: 197 LEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCD 254
Query: 373 QWVASASFDKSIKLWNGTTGKFVA----VFRGHVGPVY--QISWSADSRLLLSGSKDSTL 426
W+ +A+ D+ I++WN + ++ V + +G + ++WSA+ +LL GS D +
Sbjct: 255 YWLCAAT-DRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNI 313
Query: 427 KVWDIR 432
V++++
Sbjct: 314 YVYEVK 319
Score = 215 (80.7 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 52/142 (36%), Positives = 79/142 (55%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SGS D ++ LW+ ++ + ++ GH V V FSPD + + SAS DK+IKLWN
Sbjct: 88 LSGSWDHSVRLWDLSLGETIRS-FIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ 146
Query: 393 -KFVAVFRGHVGPV--YQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFA 449
K+ + H + + S S + +++S D +KVW+++ L ++L GH +
Sbjct: 147 CKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNT 206
Query: 450 VDWSPDGEKVASGGKDRVLKLW 471
V SPDG ASGGKD V KLW
Sbjct: 207 VTISPDGSLCASGGKDGVAKLW 228
Score = 214 (80.4 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 48/149 (32%), Positives = 79/149 (53%)
Query: 332 LVSGSDDFTMFLWEPAVSKQP------KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+VS S D + +W K +TGH Q +N V S DG + S S+D S++
Sbjct: 38 IVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVR 97
Query: 386 LWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQ-KLKQDLPGHA 444
LW+ + G+ + F GH V+ +S+S D+R ++S S+D T+K+W+ Q K H
Sbjct: 98 LWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHT 157
Query: 445 DEVFAVDWSPDGEK--VASGGKDRVLKLW 471
D + V +SP + + S G D+++K+W
Sbjct: 158 DWITCVRFSPSPNQAIIVSCGWDKLVKVW 186
Score = 210 (79.0 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 57/197 (28%), Positives = 94/197 (47%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+ ++ GH++A+ V+ S DG SGS D +VRLWDL+ + GH + V +
Sbjct: 61 IGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSV 120
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
++S D + +VS S+ ++ W+ H WIT + + P A VS
Sbjct: 121 SFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAI---IVSC 177
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
D ++W+ L+ C + L GHT + V DG + +G +D K+W+ +GK
Sbjct: 178 GWDKLVKVWN--LKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKH 235
Query: 274 IRELKGHGHWVNSLALS 290
+ L+ G +NSL S
Sbjct: 236 LYSLET-GSTINSLCFS 251
Score = 189 (71.6 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 61/229 (26%), Positives = 110/229 (48%)
Query: 106 GHTEAVLSVAFSPDGR--QLASGSGDTTVRLWDLNTQ-------TPMFKCTGHKNWVLCI 156
GH++ V SV+ D + + S S D + +W++NT T TGH + +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ S+DG +SGS ++ WD G+ + + GH + +S+ P + R+ VSA
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-GHTSDVFSVSFSPDN-----RQIVSA 132
Query: 217 SKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQG 271
S+D ++W+ +L +C ++ HT +TCV++ +I + D +KVW
Sbjct: 133 SRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNC 191
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
L + L+GH +N++ +S + +L +G D K + E +LE
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLE 240
Score = 180 (68.4 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 67/298 (22%), Positives = 135/298 (45%)
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS-------LRKCVICLSGHTLAV 243
GH W+T +S P + + VSAS+D +W+++ + L+GH+ A+
Sbjct: 19 GHSDWVTSVS-TPT--DPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG+ +GS D ++++W+ + G+ IR GH V S++ S + + + + D
Sbjct: 76 NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRD 135
Query: 302 HTGKQYSSPEEMKKAALERYNK-----IKGN-APER--LVSGSDDFTMFLWEPAVSKQPK 353
T K +++ + K ++ + ++ + +P + +VS D + +W K
Sbjct: 136 KTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNK 195
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD 413
+ GH ++N V SPDG AS D KLW+ GK + + G +
Sbjct: 196 N-LEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHL--YSLETGSTINSLCFSP 252
Query: 414 SRLLLSGSKDSTLKVWDIRTQKLKQDL-PGHADEV-----FAVDWSPDGEKVASGGKD 465
L + D +++W++ ++ + ++ P ++ ++ WS +G+ + G D
Sbjct: 253 CDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTD 310
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 86/295 (29%), Positives = 133/295 (45%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V + W+++G L +GS G + W S L HK I + W N
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW-----NKKGNF 280
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+SA D IWD + H+ V W + + S D I V + Q +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR 340
Query: 273 LIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IK-- 325
I+ +GH + VN++ T L + + D T K +S ++ L+ +NK IK
Sbjct: 341 PIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWS 400
Query: 326 --G------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVAS 377
G NA L S S D T+ LW+ T +T HQ+ V V FSPDG+++AS
Sbjct: 401 PTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT-LTKHQEPVYSVAFSPDGRYLAS 459
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
SFDK + +WN TG V +RG G ++++ W+A + + + D ++ V D+R
Sbjct: 460 GSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 80/319 (25%), Positives = 130/319 (40%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S +G Q + G + +K +T + W N+ + S DG AR
Sbjct: 197 NLSENSTSGSTQLVLRHCIREGGQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFAR 250
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IW L H + +KW G I + D T +W+ G+ ++ H
Sbjct: 251 IWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
Query: 283 W---VNSLALSTEYALRTGAFDHTGKQ-YSSPEEMKKAALERYNKIKGNAPERLVSG-SD 337
V+ + +T + T H K P + + N IK + L++ SD
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSD 369
Query: 338 DFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQ---------WVASASFDKSIKL 386
D T+ +W KQ + H + + + +SP G +ASASFD +++L
Sbjct: 370 DMTLKIWS---MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRL 426
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ G + H PVY +++S D R L SGS D + +W+ +T L G
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG- 485
Query: 447 VFAVDWSPDGEKVASGGKD 465
+F V W+ G+KV + D
Sbjct: 486 IFEVCWNAAGDKVGASASD 504
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 70/248 (28%), Positives = 109/248 (43%)
Query: 243 VTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH-G-----HW--VNSLALSTEY 293
VT + W +G + TGS D ++W T G L L H G W + LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 294 ALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP 352
T +D HTG+ AL+ + + S S D + + + +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALD----VDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
KT GH VN + + P G +AS S D ++K+W+ V + H +Y I WS
Sbjct: 343 KT-FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 413 --------DSRLLL-SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
++ L+L S S DST+++WD+ L H + V++V +SPDG +ASG
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGS 461
Query: 464 KDRVLKLW 471
D+ + +W
Sbjct: 462 FDKCVHIW 469
Score = 165 (63.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 65/243 (26%), Positives = 103/243 (42%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-------TQTPMFKCT- 147
P N+ + + GH V A++P LASGSGD+T R+W+L+ TQ + C
Sbjct: 158 PPNK-AVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR 216
Query: 148 -GHKNW-----VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
G ++ V + W+++G L +GS G + W S L HK I + W
Sbjct: 217 EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW 274
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDC 261
N +SA D IWD + H+ V W + + S D
Sbjct: 275 -----NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDM 329
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER 320
I V + Q + I+ +GH + VN++ T L + + D T K +S ++ L+
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA 389
Query: 321 YNK 323
+NK
Sbjct: 390 HNK 392
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 332 LVSGSDDFTMFLWEPAV-SKQPKTRMT-------GHQQL-----VNHVYFSPDGQWVASA 378
L SGS D T +W + S T++ G Q + V + ++ +G +A+
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
S+D ++W G + H GP++ + W+ +LS D T +WD T + KQ
Sbjct: 244 SYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQ 302
Query: 439 DLPGHADEVFAVDW 452
P H+ VDW
Sbjct: 303 QFPFHSAPALDVDW 316
Score = 128 (50.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGR---------QLASGSGDTTVRLWDLNTQTPMFKCTG 148
+ C + H + + ++ +SP G LAS S D+TVRLWD++ + T
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
H+ V +A+S DG++L SGS + W+ QTG
Sbjct: 441 HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFR------GHVGP- 404
+ GH+ V ++P +AS S D + ++WN T+G V R G P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 405 ---VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
V + W+++ LL +GS D ++W + L L H +FA+ W+ G + S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 462 GGKDRVLKLW 471
G D+ +W
Sbjct: 284 AGVDKTTIIW 293
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR-------TQKLK--------QDLP 441
V RGH V+ +W+ S LL SGS DST ++W++ TQ + QD+P
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ D V ++DW+ +G +A+G D ++W
Sbjct: 224 SNKD-VTSLDWNSEGTLLATGSYDGFARIW 252
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 8 TNNVMCLLTDPEGNPLGA 25
TN V + DP GN L +
Sbjct: 349 TNEVNAIKWDPTGNLLAS 366
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 86/295 (29%), Positives = 133/295 (45%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V + W+++G L +GS G + W S L HK I + W N
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW-----NKKGNF 280
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+SA D IWD + H+ V W + + S D I V + Q +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR 340
Query: 273 LIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IK-- 325
I+ +GH + VN++ T L + + D T K +S ++ L+ +NK IK
Sbjct: 341 PIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWS 400
Query: 326 --G------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVAS 377
G NA L S S D T+ LW+ T +T HQ+ V V FSPDG+++AS
Sbjct: 401 PTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT-LTKHQEPVYSVAFSPDGRYLAS 459
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
SFDK + +WN TG V +RG G ++++ W+A + + + D ++ V D+R
Sbjct: 460 GSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 80/319 (25%), Positives = 130/319 (40%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S +G Q + G + +K +T + W N+ + S DG AR
Sbjct: 197 NLSENSTSGSTQLVLRHCIREGGQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFAR 250
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IW L H + +KW G I + D T +W+ G+ ++ H
Sbjct: 251 IWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
Query: 283 W---VNSLALSTEYALRTGAFDHTGKQ-YSSPEEMKKAALERYNKIKGNAPERLVSG-SD 337
V+ + +T + T H K P + + N IK + L++ SD
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSD 369
Query: 338 DFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQ---------WVASASFDKSIKL 386
D T+ +W KQ + H + + + +SP G +ASASFD +++L
Sbjct: 370 DMTLKIWS---MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRL 426
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ G + H PVY +++S D R L SGS D + +W+ +T L G
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG- 485
Query: 447 VFAVDWSPDGEKVASGGKD 465
+F V W+ G+KV + D
Sbjct: 486 IFEVCWNAAGDKVGASASD 504
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 70/248 (28%), Positives = 109/248 (43%)
Query: 243 VTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH-G-----HW--VNSLALSTEY 293
VT + W +G + TGS D ++W T G L L H G W + LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 294 ALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP 352
T +D HTG+ AL+ + + S S D + + + +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALD----VDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
KT GH VN + + P G +AS S D ++K+W+ V + H +Y I WS
Sbjct: 343 KT-FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 413 --------DSRLLL-SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
++ L+L S S DST+++WD+ L H + V++V +SPDG +ASG
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGS 461
Query: 464 KDRVLKLW 471
D+ + +W
Sbjct: 462 FDKCVHIW 469
Score = 165 (63.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 65/243 (26%), Positives = 103/243 (42%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-------TQTPMFKCT- 147
P N+ + + GH V A++P LASGSGD+T R+W+L+ TQ + C
Sbjct: 158 PPNK-AVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR 216
Query: 148 -GHKNW-----VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
G ++ V + W+++G L +GS G + W S L HK I + W
Sbjct: 217 EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW 274
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDC 261
N +SA D IWD + H+ V W + + S D
Sbjct: 275 -----NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDM 329
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER 320
I V + Q + I+ +GH + VN++ T L + + D T K +S ++ L+
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA 389
Query: 321 YNK 323
+NK
Sbjct: 390 HNK 392
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 332 LVSGSDDFTMFLWEPAV-SKQPKTRMT-------GHQQL-----VNHVYFSPDGQWVASA 378
L SGS D T +W + S T++ G Q + V + ++ +G +A+
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
S+D ++W G + H GP++ + W+ +LS D T +WD T + KQ
Sbjct: 244 SYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQ 302
Query: 439 DLPGHADEVFAVDW 452
P H+ VDW
Sbjct: 303 QFPFHSAPALDVDW 316
Score = 128 (50.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGR---------QLASGSGDTTVRLWDLNTQTPMFKCTG 148
+ C + H + + ++ +SP G LAS S D+TVRLWD++ + T
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
H+ V +A+S DG++L SGS + W+ QTG
Sbjct: 441 HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFR------GHVGP- 404
+ GH+ V ++P +AS S D + ++WN T+G V R G P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 405 ---VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
V + W+++ LL +GS D ++W + L L H +FA+ W+ G + S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 462 GGKDRVLKLW 471
G D+ +W
Sbjct: 284 AGVDKTTIIW 293
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR-------TQKLK--------QDLP 441
V RGH V+ +W+ S LL SGS DST ++W++ TQ + QD+P
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ D V ++DW+ +G +A+G D ++W
Sbjct: 224 SNKD-VTSLDWNSEGTLLATGSYDGFARIW 252
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 8 TNNVMCLLTDPEGNPLGA 25
TN V + DP GN L +
Sbjct: 349 TNEVNAIKWDPTGNLLAS 366
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 86/295 (29%), Positives = 133/295 (45%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V + W+++G L +GS G + W S L HK I + W N
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW-----NKKGNF 280
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+SA D IWD + H+ V W + + S D I V + Q +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR 340
Query: 273 LIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IK-- 325
I+ +GH + VN++ T L + + D T K +S ++ L+ +NK IK
Sbjct: 341 PIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWS 400
Query: 326 --G------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVAS 377
G NA L S S D T+ LW+ T +T HQ+ V V FSPDG+++AS
Sbjct: 401 PTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT-LTKHQEPVYSVAFSPDGRYLAS 459
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
SFDK + +WN TG V +RG G ++++ W+A + + + D ++ V D+R
Sbjct: 460 GSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
Score = 214 (80.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 80/319 (25%), Positives = 130/319 (40%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S +G Q + G + +K +T + W N+ + S DG AR
Sbjct: 197 NLSENSTSGPTQLVLRHCIREGGQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFAR 250
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IW L H + +KW G I + D T +W+ G+ ++ H
Sbjct: 251 IWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
Query: 283 W---VNSLALSTEYALRTGAFDHTGKQ-YSSPEEMKKAALERYNKIKGNAPERLVSG-SD 337
V+ + +T + T H K P + + N IK + L++ SD
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSD 369
Query: 338 DFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQ---------WVASASFDKSIKL 386
D T+ +W KQ + H + + + +SP G +ASASFD +++L
Sbjct: 370 DMTLKIWS---MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRL 426
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ G + H PVY +++S D R L SGS D + +W+ +T L G
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG- 485
Query: 447 VFAVDWSPDGEKVASGGKD 465
+F V W+ G+KV + D
Sbjct: 486 IFEVCWNAAGDKVGASASD 504
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 70/248 (28%), Positives = 109/248 (43%)
Query: 243 VTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH-G-----HW--VNSLALSTEY 293
VT + W +G + TGS D ++W T G L L H G W + LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 294 ALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP 352
T +D HTG+ AL+ + + S S D + + + +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALD----VDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
KT GH VN + + P G +AS S D ++K+W+ V + H +Y I WS
Sbjct: 343 KT-FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 413 --------DSRLLL-SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
++ L+L S S DST+++WD+ L H + V++V +SPDG +ASG
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGS 461
Query: 464 KDRVLKLW 471
D+ + +W
Sbjct: 462 FDKCVHIW 469
Score = 165 (63.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 65/243 (26%), Positives = 103/243 (42%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-------TQTPMFKCT- 147
P N+ + + GH V A++P LASGSGD+T R+W+L+ TQ + C
Sbjct: 158 PSNK-AVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIR 216
Query: 148 -GHKNW-----VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
G ++ V + W+++G L +GS G + W S L HK I + W
Sbjct: 217 EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW 274
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDC 261
N +SA D IWD + H+ V W + + S D
Sbjct: 275 -----NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDM 329
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER 320
I V + Q + I+ +GH + VN++ T L + + D T K +S ++ L+
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA 389
Query: 321 YNK 323
+NK
Sbjct: 390 HNK 392
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 332 LVSGSDDFTMFLWEPAV-SKQPKTRMT-------GHQQL-----VNHVYFSPDGQWVASA 378
L SGS D T +W + S T++ G Q + V + ++ +G +A+
Sbjct: 184 LASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
S+D ++W G + H GP++ + W+ +LS D T +WD T + KQ
Sbjct: 244 SYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQ 302
Query: 439 DLPGHADEVFAVDW 452
P H+ VDW
Sbjct: 303 QFPFHSAPALDVDW 316
Score = 128 (50.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGR---------QLASGSGDTTVRLWDLNTQTPMFKCTG 148
+ C + H + + ++ +SP G LAS S D+TVRLWD++ + T
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
H+ V +A+S DG++L SGS + W+ QTG
Sbjct: 441 HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFR------GHVGP- 404
+ GH+ V ++P +AS S D + ++WN T+G V R G P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 405 ---VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
V + W+++ LL +GS D ++W + L L H +FA+ W+ G + S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 462 GGKDRVLKLW 471
G D+ +W
Sbjct: 284 AGVDKTTIIW 293
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR-------TQKLK--------QDLP 441
V RGH V+ +W+ S LL SGS DST ++W++ TQ + QD+P
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVP 223
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ D V ++DW+ +G +A+G D ++W
Sbjct: 224 SNKD-VTSLDWNSEGTLLATGSYDGFARIW 252
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 8 TNNVMCLLTDPEGNPLGA 25
TN V + DP GN L +
Sbjct: 349 TNEVNAIKWDPTGNLLAS 366
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 86/295 (29%), Positives = 133/295 (45%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V + W+++G L +GS G + W S L HK I + W N
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW-----NKKGNF 280
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+SA D IWD + H+ V W + + S D I V + Q +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR 340
Query: 273 LIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNK----IK-- 325
I+ +GH + VN++ T L + + D T K +S ++ L+ +NK IK
Sbjct: 341 PIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWS 400
Query: 326 --G------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVAS 377
G NA L S S D T+ LW+ T +T HQ+ V V FSPDG+++AS
Sbjct: 401 PTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT-LTKHQEPVYSVAFSPDGRYLAS 459
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR 432
SFDK + +WN TG V +RG G ++++ W+A + + + D ++ V D+R
Sbjct: 460 GSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
Score = 214 (80.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 80/319 (25%), Positives = 130/319 (40%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S +G Q + G + +K +T + W N+ + S DG AR
Sbjct: 197 NLSENSTSGPTQLVLRHCIREGGQDVPSNKD-VTSLDW-----NSEGTLLATGSYDGFAR 250
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IW L H + +KW G I + D T +W+ G+ ++ H
Sbjct: 251 IWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
Query: 283 W---VNSLALSTEYALRTGAFDHTGKQ-YSSPEEMKKAALERYNKIKGNAPERLVSG-SD 337
V+ + +T + T H K P + + N IK + L++ SD
Sbjct: 310 PALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSD 369
Query: 338 DFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQ---------WVASASFDKSIKL 386
D T+ +W KQ + H + + + +SP G +ASASFD +++L
Sbjct: 370 DMTLKIWS---MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRL 426
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ G + H PVY +++S D R L SGS D + +W+ +T L G
Sbjct: 427 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG- 485
Query: 447 VFAVDWSPDGEKVASGGKD 465
+F V W+ G+KV + D
Sbjct: 486 IFEVCWNAAGDKVGASASD 504
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 70/248 (28%), Positives = 109/248 (43%)
Query: 243 VTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH-G-----HW--VNSLALSTEY 293
VT + W +G + TGS D ++W T G L L H G W + LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 294 ALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP 352
T +D HTG+ AL+ + + S S D + + + +
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALD----VDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSA 412
KT GH VN + + P G +AS S D ++K+W+ V + H +Y I WS
Sbjct: 343 KT-FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 413 --------DSRLLL-SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 463
++ L+L S S DST+++WD+ L H + V++V +SPDG +ASG
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGS 461
Query: 464 KDRVLKLW 471
D+ + +W
Sbjct: 462 FDKCVHIW 469
Score = 165 (63.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 65/243 (26%), Positives = 103/243 (42%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-------TQTPMFKCT- 147
P N+ + + GH V A++P LASGSGD+T R+W+L+ TQ + C
Sbjct: 158 PPNK-AVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIR 216
Query: 148 -GHKNW-----VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
G ++ V + W+++G L +GS G + W S L HK I + W
Sbjct: 217 EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW 274
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDC 261
N +SA D IWD + H+ V W + + S D
Sbjct: 275 -----NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDM 329
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER 320
I V + Q + I+ +GH + VN++ T L + + D T K +S ++ L+
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA 389
Query: 321 YNK 323
+NK
Sbjct: 390 HNK 392
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 332 LVSGSDDFTMFLWEPAV-SKQPKTRMT-------GHQQL-----VNHVYFSPDGQWVASA 378
L SGS D T +W + S T++ G Q + V + ++ +G +A+
Sbjct: 184 LASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQ 438
S+D ++W G + H GP++ + W+ +LS D T +WD T + KQ
Sbjct: 244 SYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQ 302
Query: 439 DLPGHADEVFAVDW 452
P H+ VDW
Sbjct: 303 QFPFHSAPALDVDW 316
Score = 128 (50.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGR---------QLASGSGDTTVRLWDLNTQTPMFKCTG 148
+ C + H + + ++ +SP G LAS S D+TVRLWD++ + T
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
H+ V +A+S DG++L SGS + W+ QTG
Sbjct: 441 HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG 474
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFR------GHVGP- 404
+ GH+ V ++P +AS S D + ++WN T+G V R G P
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 405 ---VYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
V + W+++ LL +GS D ++W + L L H +FA+ W+ G + S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 462 GGKDRVLKLW 471
G D+ +W
Sbjct: 284 AGVDKTTIIW 293
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 397 VFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR-------TQKLK--------QDLP 441
V RGH V+ +W+ S LL SGS DST ++W++ TQ + QD+P
Sbjct: 164 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVP 223
Query: 442 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+ D V ++DW+ +G +A+G D ++W
Sbjct: 224 SNKD-VTSLDWNSEGTLLATGSYDGFARIW 252
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 8 TNNVMCLLTDPEGNPLGA 25
TN V + DP GN L +
Sbjct: 349 TNEVNAIKWDPTGNLLAS 366
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 181 (68.8 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 46/148 (31%), Positives = 71/148 (47%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
R VS SDD ++ +WE + K + V SP+G+W+A S D I ++ G
Sbjct: 433 RFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIF-GA 491
Query: 391 TGKF----VAVFRGHV--GPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 444
+F +F+GH+ G Q+ +S D ++SG D L +WD +T KL + H
Sbjct: 492 QNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAHD 551
Query: 445 DEVFAVDWSP-DGEKVASGGKDRVLKLW 471
W P + KV + G D ++KLW
Sbjct: 552 KVCIGAVWHPHETSKVITCGWDGLIKLW 579
Score = 160 (61.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S D + LWE ++ GH + V + F+ G SA++D+ IKLW+ T
Sbjct: 305 LLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTET 364
Query: 392 GKFVAVFRGHVGPVYQISWSADS---RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 448
G+ ++ F P Y + ++ D L ++G D + WDIR+ ++ Q+ H V
Sbjct: 365 GQCISRFTNRKVP-YCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVN 423
Query: 449 AVDWSPDGEKVASGGKDRVLKLW 471
+ + + + S D+ L++W
Sbjct: 424 TIVFVDENRRFVSTSDDKSLRVW 446
Score = 138 (53.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 66/302 (21%), Positives = 115/302 (38%)
Query: 147 TGHKNWVLCIA-WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
+GH V + + G L+S S +++ W+ + GH K + I +
Sbjct: 286 SGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFN--- 342
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD----GVIYTGSQDC 261
NA R F+SA+ D ++WD +C+ + + CVK+ D + G D
Sbjct: 343 -NAGTR-FLSAAYDRYIKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAGMSDK 399
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGK---QYSSPEEMKKAAL 318
I W+ G++++E H VN++ E D ++ P + K A
Sbjct: 400 KIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAE 459
Query: 319 ERYNKIKGN--APER--LVSGSDDFTMFLW--EPAVSKQPKTRMTGHQQL--VNHVYFSP 370
+ + +P L S D + ++ + K GH V FSP
Sbjct: 460 PSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSP 519
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSAD--SRLLLSGSKDSTLKV 428
D +V S D + +W+ T K + + H W S+++ G D +K+
Sbjct: 520 DMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETSKVITCGW-DGLIKL 578
Query: 429 WD 430
WD
Sbjct: 579 WD 580
Score = 121 (47.7 bits), Expect = 0.00043, P = 0.00043
Identities = 64/301 (21%), Positives = 125/301 (41%)
Query: 105 AGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAWSADG 162
+GHT+ V +V P G L S S D ++LW++ + GH V I ++ G
Sbjct: 286 SGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNAG 345
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+S + ++ WD +TG+ ++K + + P FV+ D
Sbjct: 346 TRFLSAAYDRYIKLWDTETGQCISR--FTNRKVPYCVKFNPDEDKQ--NLFVAGMSDKKI 401
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWE---TTQGKLIRELK 278
WD+ + V H AV + + + + S D +++VWE K I E
Sbjct: 402 VQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPS 461
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMK--KAALERYNKIKGNA------PE 330
H +L+ + ++ L + D+ + + + K + + + + G A P+
Sbjct: 462 MHSMPAVTLSPNGKW-LACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPD 520
Query: 331 R--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL-VNHVYFSPDGQWVASASFDKSIKLW 387
++SG D + +W+ +K +R+ H ++ + V+ + V + +D IKLW
Sbjct: 521 MSYVISGDADGKLNIWDWKTTKL-YSRIKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 579
Query: 388 N 388
+
Sbjct: 580 D 580
Score = 117 (46.2 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 38/131 (29%), Positives = 62/131 (47%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
RC T GH +AV + F+ G + S + D ++LWD T + + T K C+ +
Sbjct: 324 RCLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTNRKV-PYCVKF 382
Query: 159 SADG--KHL-VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ D ++L V+G ++ WD ++G+ H + I + V N RRFVS
Sbjct: 383 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIV-QEYDRHLGAVNTIVF--VDEN---RRFVS 436
Query: 216 ASKDGDARIWD 226
S D R+W+
Sbjct: 437 TSDDKSLRVWE 447
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 245 (91.3 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 88/335 (26%), Positives = 155/335 (46%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + ++SGS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIKGAEEW--ILSGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ ++AS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGHAGSVDAIAVDSSGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAAL 318
D +K+W T E++ + + + L RT +G
Sbjct: 210 DKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTPLVTLSGHT------------ 257
Query: 319 ERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
E + + + + + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS
Sbjct: 258 EAISSVLWSDADEVCSASWDHTVRVWD-VESGGLKSTLTGNK-VFNCISYSPLCKRLASG 315
Query: 379 SFDKSIKLWNGTT--GKFVAV-FRGHVGPVYQISWS-ADSRLLLSGSKDSTLKVWDIRTQ 434
S D+ I+LW+ T G V++ H G V + WS + L+SGS D+ +K+WD R+
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLWDTRSC 375
Query: 435 KLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRVL 468
K DL H D+V +VDW+ G + SGG D L
Sbjct: 376 KAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNKL 409
Score = 233 (87.1 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 55/161 (34%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHTEA+ SV +S D ++ S S D TVR+WD+ + TG+K + CI++S
Sbjct: 252 TLSGHTEAISSVLWS-DADEVCSASWDHTVRVWDVESGGLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTH----DQQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 226 (84.6 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 86/322 (26%), Positives = 151/322 (46%)
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+S + EL+ + T P H WI+ I + +S S D +RIW
Sbjct: 75 ISSEEVVELEYVEKYTA-PQPEQCMFHDDWISSIKGAEEWI-------LSGSYDKTSRIW 126
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKLIREL--- 277
+ K ++ + GHT V V W D + + T S D TI +WE + ++ L
Sbjct: 127 SLE-GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCC 185
Query: 278 KGHGHWVNSLAL-STEYALRTGAFDHTGKQYSS-PEEMKKAALERYNKI-KGNAPERLVS 334
+GH V+++A+ S+ +G++D K +S+ P + + E N+ K E+L
Sbjct: 186 RGHAGSVDAIAVDSSGTKFCSGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQL-- 243
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
+++ P ++GH + ++ V +S D V SAS+D ++++W+ +G
Sbjct: 244 ------------GLTRTPLVTLSGHTEAISSVLWS-DADEVCSASWDHTVRVWDVESGGL 290
Query: 395 VAVFRGHVGPVYQ-ISWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAV 450
+ G+ V+ IS+S + L SGS D +++WD RT+ + L H V +V
Sbjct: 291 KSTLTGN--KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSV 348
Query: 451 DWSPD-GEKVASGGKDRVLKLW 471
WSP +++ SG D ++KLW
Sbjct: 349 KWSPTHDQQLISGSLDNMVKLW 370
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 54/176 (30%), Positives = 85/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH + + WS D + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPLVTLSGHTEAISSVLWS-DADEVCSASWDHTVRVWDVESGGLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW D
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHDQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 250 (93.1 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 63/196 (32%), Positives = 98/196 (50%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W +N + TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 281 GHWVNSLALS-TEYAL 295
VN + +EY L
Sbjct: 189 YGPVNVVEFHPSEYPL 204
Score = 210 (79.0 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 67/222 (30%), Positives = 101/222 (45%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + VW + + L GH + SL +S + L A +G E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P + SGS D + LW+ K + H Q V
Sbjct: 94 AAKI-LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR-RKGCIFKYKSHTQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSK-D 423
+ FSPDG+W+ASA+ D ++KLW+ T GK + F GH GPV + + S L+GS
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHP-SEYPLAGSPVH 210
Query: 424 STLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 465
T++ WD+ + + A V + ++PDG + G +D
Sbjct: 211 RTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD 252
Score = 197 (74.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 56/205 (27%), Positives = 92/205 (44%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSG 128
+E ++S ++ L + R+ + T+ GH + S+ F P G +ASGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD GK
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 189 LSGHKKWITGISWEPVHL---NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTC 245
+GH + + + P +P R + R WD+ V C+ V C
Sbjct: 185 FTGHYGPVNVVEFHPSEYPLAGSPVHRTI--------RFWDLEKFHVVSCIEEEATPVRC 236
Query: 246 VKWGGDGV-IYTGSQDCTIKV--WE 267
+ + DG +Y G QD +++V WE
Sbjct: 237 ILFNPDGCCLYGGFQD-SLRVYGWE 260
Score = 195 (73.7 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 57/205 (27%), Positives = 98/205 (47%)
Query: 274 IRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYSSPEEMKKAALERYN----KIKGN 327
++E+ H V+SL L ST L TG D +S + +L + ++ +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
A E L V+GS ++ +W+ +K +T + GH+ + + F P G +VAS S D IKL
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRT-LLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 446
W+ + ++ H V + +S D + L S + D T+K+WD+ K+ + GH
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 191
Query: 447 VFAVDWSPDGEKVASGGKDRVLKLW 471
V V++ P +A R ++ W
Sbjct: 192 VNVVEFHPSEYPLAGSPVHRTIRFW 216
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 60/229 (26%), Positives = 103/229 (44%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W V+ CV+ L+GHT + ++ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN------ 322
K++R L GH + SL + + +G+ D K + + +K + +Y
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW---DVRRKGCIFKYKSHTQAV 150
Query: 323 KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+ +P+ L S +DD T+ LW+ K TGH VN V F P +A +
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKV-MFEFTGHYGPVNVVEFHPSEYPLAGSPV 209
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVW 429
++I+ W+ V+ PV I ++ D L G +DS L+V+
Sbjct: 210 HRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDS-LRVY 257
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/232 (20%), Positives = 96/232 (41%)
Query: 97 VNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
VN+ C ++ GHT + S+ S + +GS ++R+WDL + GHK +
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ + G + SGS +++ WD + K H + + + + P +
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLA 163
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQ-DCTIKVWETTQGKL 273
SA+ D ++WD++ K + +GH V V++ GS TI+ W+ + +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHV 223
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
+ ++ V + + + G F + + Y PE + + K+
Sbjct: 224 VSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 275
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 245 (91.3 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 89/336 (26%), Positives = 154/336 (45%)
Query: 146 CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C H +WV + A +++G L W + GK + GH + G++W +
Sbjct: 104 CLLHDDWVSAV--EARDNWILTGCYDNTLNLWTTK-GKHKLT-IPGHIAPVKGVTW--IS 157
Query: 206 LNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
L+ F SAS+D +W+ ++ +CV GH V C+ G + TGS D
Sbjct: 158 LDEEKGVFASASQDQTVMLWEWNVAANSVECVQVCKGHERGVDCIAANGSKTKMATGSWD 217
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+K+W T +R G G + + S L G+ + E +
Sbjct: 218 TMLKIWSTD----VRS--GGGD--SEPSTSKRQKLDQGSARTPLMTLAGHRE----CISG 265
Query: 321 YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
I N LV+ S D T+ +W+ A++ K+ ++G++ + Y +G + +AS
Sbjct: 266 VQWIDDNT---LVTSSWDHTIKIWDLALNGI-KSEISGNKSFFDLSYSKLNGL-IITASP 320
Query: 381 DKSIKLWN--GTTGKFVA-VFRGHVGPVYQISWSADSR-LLLSGSKDSTLKVWDIRTQKL 436
DK+++L++ G V + GH V + WS + L +SG+ D+ +K+WD R+ K
Sbjct: 321 DKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVKLWDYRSPKA 380
Query: 437 KQ-DLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 471
+L GH D+V A DWS + + SGG D ++++
Sbjct: 381 PIFELIGHEDKVLACDWS-NPRFILSGGSDNSVRVF 415
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 43/169 (25%), Positives = 81/169 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+AGH E + V + D L + S D T+++WDL + +G+K++ +++S
Sbjct: 255 TLAGHRECISGVQWIDDNT-LVTSSWDHTIKIWDLALNGIKSEISGNKSF-FDLSYSKLN 312
Query: 163 KHLVSGSKAGELQCWDPQTGKPS--GNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+++ S L+ +DP++ + + N GH +W+ + W + FVS + D
Sbjct: 313 GLIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYL----FVSGAYDN 368
Query: 221 DARIWDVSLRKCVIC-LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET 268
++WD K I L GH V W I +G D +++V+++
Sbjct: 369 HVKLWDYRSPKAPIFELIGHEDKVLACDWSNPRFILSGGSDNSVRVFKS 417
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 225 (84.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 225 (84.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 48/150 (32%), Positives = 85/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++S+D+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
++ V V +SP+ + S G D+++K+W
Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL---PGHAD--EVFAVDWSP 454
+ + +R L + ++K+WD+ +LKQ++ A+ + ++ WS
Sbjct: 234 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLVRVW 310
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 76/273 (27%), Positives = 120/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +LKQ++
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 77/309 (24%), Positives = 135/309 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA------VF----RGHVGPVYQISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + V + ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLVRVWQV 312
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 43 (20.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>CGD|CAL0004530 [details] [associations]
symbol:CDH1 species:5476 "Candida albicans" [GO:0007096
"regulation of exit from mitosis" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0010997 "anaphase-promoting complex binding"
evidence=IEA] [GO:0097027 "ubiquitin-protein ligase activator
activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0030996 "cell cycle arrest in response to nitrogen starvation"
evidence=IEA] [GO:0010697 "negative regulation of spindle pole body
separation" evidence=IEA] [GO:0008361 "regulation of cell size"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:2000600 "positive regulation of cyclin
catabolic process" evidence=IEA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=IEA] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0004530 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0007096
HOGENOM:HOG000195514 KO:K03364 EMBL:AACQ01000031 EMBL:AACQ01000030
RefSeq:XP_719530.1 RefSeq:XP_719654.1 ProteinModelPortal:Q5ACY4
STRING:Q5ACY4 GeneID:3638700 GeneID:3638814 KEGG:cal:CaO19.2084
KEGG:cal:CaO19.9631 Uniprot:Q5ACY4
Length = 597
Score = 249 (92.7 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 76/267 (28%), Positives = 129/267 (48%)
Query: 220 GDA-RIWDVSLRKCV-ICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRE 276
GD+ +WD + + +C + VT + W G G + G+ +++W+ T+ K IR
Sbjct: 311 GDSVYLWDGATQSVDRLCNLTNKDKVTSLNWIGTGTHLAIGTSKGLVEIWDATRIKCIRT 370
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSP-EEMKKAALERYNK----IKGNAPE- 330
+ GH V+SLA + E+ L +G+ D T E+ + + + +K N E
Sbjct: 371 MTGHSLRVSSLAWN-EHILSSGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKWNVEEN 429
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA---SFDKSIKLW 387
+L SG +D +F+W+ ++ +P + T H V + +SP + + ++ + DK+IK W
Sbjct: 430 KLASGGNDNNLFVWD-GLNPKPLHQFTDHTAAVKAIAWSPHQRGILASGGGTADKTIKTW 488
Query: 388 NGTTGKFVA-VFRGHVGPVYQISWSADSRLLLS--GSKDSTLKVWDIRTQKLKQDLPGHA 444
N TG V V G V + WS +S L+S G + + VW + + L GH
Sbjct: 489 NTLTGNLVHDVNTG--SQVCNLIWSKNSNELVSTHGYSRNQIIVWKYPSMQQIAQLTGHT 546
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V + SPDGE + +G D L+ W
Sbjct: 547 YRVLYLSLSPDGETIVTGAGDETLRFW 573
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 73/284 (25%), Positives = 125/284 (44%)
Query: 120 GRQ--LASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQC 176
G+Q LA G GD+ V LWD TQ+ C +K+ V + W G HL G+ G ++
Sbjct: 301 GQQDVLAVGLGDS-VYLWDGATQSVDRLCNLTNKDKVTSLNWIGTGTHLAIGTSKGLVEI 359
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
WD K ++GH ++ ++W L++ R ++D RI D + K
Sbjct: 360 WDATRIKCI-RTMTGHSLRVSSLAWNEHILSSGSRDRTILNRD--VRIEDHFVNK----F 412
Query: 237 SGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-- 293
H V +KW + + +G D + VW+ K + + H V ++A S
Sbjct: 413 DNHKQEVCGLKWNVEENKLASGGNDNNLFVWDGLNPKPLHQFTDHTAAVKAIAWSPHQRG 472
Query: 294 --ALRTGAFDHTGKQYSS-----PEEMKKAALERYNKIKGNAPERLVS--GSDDFTMFLW 344
A G D T K +++ ++ + + N I LVS G + +W
Sbjct: 473 ILASGGGTADKTIKTWNTLTGNLVHDVNTGS-QVCNLIWSKNSNELVSTHGYSRNQIIVW 531
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ S Q ++TGH V ++ SPDG+ + + + D++++ WN
Sbjct: 532 KYP-SMQQIAQLTGHTYRVLYLSLSPDGETIVTGAGDETLRFWN 574
Score = 165 (63.1 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 62/261 (23%), Positives = 113/261 (43%)
Query: 97 VNR-CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
V+R C+ T + + V S+ + G LA G+ V +WD + TGH V
Sbjct: 324 VDRLCNLT---NKDKVTSLNWIGTGTHLAIGTSKGLVEIWDATRIKCIRTMTGHSLRVSS 380
Query: 156 IAWSADGKHLVS-GSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+AW+ +H++S GS+ + D + N HK+ + G+ W N +
Sbjct: 381 LAWN---EHILSSGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKW-----NVEENKLA 432
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTG--SQDCTIKVWETTQ 270
S D + +WD K + + HT AV + W G++ +G + D TIK W T
Sbjct: 433 SGGNDNNLFVWDGLNPKPLHQFTDHTAAVKAIAWSPHQRGILASGGGTADKTIKTWNTLT 492
Query: 271 GKLIRELKGHGHWVNSL-ALSTEYALRTGAFDHTGK---QYSSPEEMKKAALERYNKIKG 326
G L+ ++ N + + ++ + T + +Y S +++ + Y +
Sbjct: 493 GNLVHDVNTGSQVCNLIWSKNSNELVSTHGYSRNQIIVWKYPSMQQIAQLTGHTYRVLYL 552
Query: 327 N-AP--ERLVSGSDDFTMFLW 344
+ +P E +V+G+ D T+ W
Sbjct: 553 SLSPDGETIVTGAGDETLRFW 573
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 58/262 (22%), Positives = 115/262 (43%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
+K +T ++W + + SK G IWD + KC+ ++GH+L V+ + W +
Sbjct: 332 NKDKVTSLNW----IGTGTHLAIGTSK-GLVEIWDATRIKCIRTMTGHSLRVSSLAWN-E 385
Query: 252 GVIYTGSQDCTIKVWETT-QGKLIRELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYS- 308
++ +GS+D TI + + + + H V L + E L +G D+ +
Sbjct: 386 HILSSGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKWNVEENKLASGGNDNNLFVWDG 445
Query: 309 -SPEEMKKAALERYNKIKGNA--PER---LVSGSD--DFTMFLWEPAVSKQPKTRMTGHQ 360
+P+ + + + +K A P + L SG D T+ W TG
Sbjct: 446 LNPKPLHQFT-DHTAAVKAIAWSPHQRGILASGGGTADKTIKTWNTLTGNLVHDVNTG-S 503
Query: 361 QLVNHVYFSPDGQWVASASFDKS-IKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
Q+ N ++ + V++ + ++ I +W + + +A GH V +S S D +++
Sbjct: 504 QVCNLIWSKNSNELVSTHGYSRNQIIVWKYPSMQQIAQLTGHTYRVLYLSLSPDGETIVT 563
Query: 420 GSKDSTLKVWDIRTQKLKQDLP 441
G+ D TL+ W++ + + P
Sbjct: 564 GAGDETLRFWNVFEKNRHNESP 585
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/153 (24%), Positives = 69/153 (45%)
Query: 322 NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
N + + L G D +++LW+ A + ++ V + + G +A +
Sbjct: 296 NLVDWGQQDVLAVGLGD-SVYLWDGATQSVDRLCNLTNKDKVTSLNWIGTGTHLAIGTSK 354
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK-LKQDL 440
+++W+ T K + GH V ++W+ +L SGS+D T+ D+R +
Sbjct: 355 GLVEIWDATRIKCIRTMTGHSLRVSSLAWN--EHILSSGSRDRTILNRDVRIEDHFVNKF 412
Query: 441 PGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
H EV + W+ + K+ASGG D L +W G
Sbjct: 413 DNHKQEVCGLKWNVEENKLASGGNDNNLFVWDG 445
>UNIPROTKB|Q5ACY4 [details] [associations]
symbol:CDH1 "Putative uncharacterized protein CDH1"
species:237561 "Candida albicans SC5314" [GO:0007096 "regulation of
exit from mitosis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004530 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0007096 HOGENOM:HOG000195514 KO:K03364 EMBL:AACQ01000031
EMBL:AACQ01000030 RefSeq:XP_719530.1 RefSeq:XP_719654.1
ProteinModelPortal:Q5ACY4 STRING:Q5ACY4 GeneID:3638700
GeneID:3638814 KEGG:cal:CaO19.2084 KEGG:cal:CaO19.9631
Uniprot:Q5ACY4
Length = 597
Score = 249 (92.7 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 76/267 (28%), Positives = 129/267 (48%)
Query: 220 GDA-RIWDVSLRKCV-ICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRE 276
GD+ +WD + + +C + VT + W G G + G+ +++W+ T+ K IR
Sbjct: 311 GDSVYLWDGATQSVDRLCNLTNKDKVTSLNWIGTGTHLAIGTSKGLVEIWDATRIKCIRT 370
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSP-EEMKKAALERYNK----IKGNAPE- 330
+ GH V+SLA + E+ L +G+ D T E+ + + + +K N E
Sbjct: 371 MTGHSLRVSSLAWN-EHILSSGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKWNVEEN 429
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA---SFDKSIKLW 387
+L SG +D +F+W+ ++ +P + T H V + +SP + + ++ + DK+IK W
Sbjct: 430 KLASGGNDNNLFVWD-GLNPKPLHQFTDHTAAVKAIAWSPHQRGILASGGGTADKTIKTW 488
Query: 388 NGTTGKFVA-VFRGHVGPVYQISWSADSRLLLS--GSKDSTLKVWDIRTQKLKQDLPGHA 444
N TG V V G V + WS +S L+S G + + VW + + L GH
Sbjct: 489 NTLTGNLVHDVNTG--SQVCNLIWSKNSNELVSTHGYSRNQIIVWKYPSMQQIAQLTGHT 546
Query: 445 DEVFAVDWSPDGEKVASGGKDRVLKLW 471
V + SPDGE + +G D L+ W
Sbjct: 547 YRVLYLSLSPDGETIVTGAGDETLRFW 573
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 73/284 (25%), Positives = 125/284 (44%)
Query: 120 GRQ--LASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQC 176
G+Q LA G GD+ V LWD TQ+ C +K+ V + W G HL G+ G ++
Sbjct: 301 GQQDVLAVGLGDS-VYLWDGATQSVDRLCNLTNKDKVTSLNWIGTGTHLAIGTSKGLVEI 359
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
WD K ++GH ++ ++W L++ R ++D RI D + K
Sbjct: 360 WDATRIKCI-RTMTGHSLRVSSLAWNEHILSSGSRDRTILNRD--VRIEDHFVNK----F 412
Query: 237 SGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-- 293
H V +KW + + +G D + VW+ K + + H V ++A S
Sbjct: 413 DNHKQEVCGLKWNVEENKLASGGNDNNLFVWDGLNPKPLHQFTDHTAAVKAIAWSPHQRG 472
Query: 294 --ALRTGAFDHTGKQYSS-----PEEMKKAALERYNKIKGNAPERLVS--GSDDFTMFLW 344
A G D T K +++ ++ + + N I LVS G + +W
Sbjct: 473 ILASGGGTADKTIKTWNTLTGNLVHDVNTGS-QVCNLIWSKNSNELVSTHGYSRNQIIVW 531
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ S Q ++TGH V ++ SPDG+ + + + D++++ WN
Sbjct: 532 KYP-SMQQIAQLTGHTYRVLYLSLSPDGETIVTGAGDETLRFWN 574
Score = 165 (63.1 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 62/261 (23%), Positives = 113/261 (43%)
Query: 97 VNR-CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
V+R C+ T + + V S+ + G LA G+ V +WD + TGH V
Sbjct: 324 VDRLCNLT---NKDKVTSLNWIGTGTHLAIGTSKGLVEIWDATRIKCIRTMTGHSLRVSS 380
Query: 156 IAWSADGKHLVS-GSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+AW+ +H++S GS+ + D + N HK+ + G+ W N +
Sbjct: 381 LAWN---EHILSSGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKW-----NVEENKLA 432
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTG--SQDCTIKVWETTQ 270
S D + +WD K + + HT AV + W G++ +G + D TIK W T
Sbjct: 433 SGGNDNNLFVWDGLNPKPLHQFTDHTAAVKAIAWSPHQRGILASGGGTADKTIKTWNTLT 492
Query: 271 GKLIRELKGHGHWVNSL-ALSTEYALRTGAFDHTGK---QYSSPEEMKKAALERYNKIKG 326
G L+ ++ N + + ++ + T + +Y S +++ + Y +
Sbjct: 493 GNLVHDVNTGSQVCNLIWSKNSNELVSTHGYSRNQIIVWKYPSMQQIAQLTGHTYRVLYL 552
Query: 327 N-AP--ERLVSGSDDFTMFLW 344
+ +P E +V+G+ D T+ W
Sbjct: 553 SLSPDGETIVTGAGDETLRFW 573
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 58/262 (22%), Positives = 115/262 (43%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
+K +T ++W + + SK G IWD + KC+ ++GH+L V+ + W +
Sbjct: 332 NKDKVTSLNW----IGTGTHLAIGTSK-GLVEIWDATRIKCIRTMTGHSLRVSSLAWN-E 385
Query: 252 GVIYTGSQDCTIKVWETT-QGKLIRELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYS- 308
++ +GS+D TI + + + + H V L + E L +G D+ +
Sbjct: 386 HILSSGSRDRTILNRDVRIEDHFVNKFDNHKQEVCGLKWNVEENKLASGGNDNNLFVWDG 445
Query: 309 -SPEEMKKAALERYNKIKGNA--PER---LVSGSD--DFTMFLWEPAVSKQPKTRMTGHQ 360
+P+ + + + +K A P + L SG D T+ W TG
Sbjct: 446 LNPKPLHQFT-DHTAAVKAIAWSPHQRGILASGGGTADKTIKTWNTLTGNLVHDVNTG-S 503
Query: 361 QLVNHVYFSPDGQWVASASFDKS-IKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLS 419
Q+ N ++ + V++ + ++ I +W + + +A GH V +S S D +++
Sbjct: 504 QVCNLIWSKNSNELVSTHGYSRNQIIVWKYPSMQQIAQLTGHTYRVLYLSLSPDGETIVT 563
Query: 420 GSKDSTLKVWDIRTQKLKQDLP 441
G+ D TL+ W++ + + P
Sbjct: 564 GAGDETLRFWNVFEKNRHNESP 585
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/153 (24%), Positives = 69/153 (45%)
Query: 322 NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
N + + L G D +++LW+ A + ++ V + + G +A +
Sbjct: 296 NLVDWGQQDVLAVGLGD-SVYLWDGATQSVDRLCNLTNKDKVTSLNWIGTGTHLAIGTSK 354
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK-LKQDL 440
+++W+ T K + GH V ++W+ +L SGS+D T+ D+R +
Sbjct: 355 GLVEIWDATRIKCIRTMTGHSLRVSSLAWN--EHILSSGSRDRTILNRDVRIEDHFVNKF 412
Query: 441 PGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 473
H EV + W+ + K+ASGG D L +W G
Sbjct: 413 DNHKQEVCGLKWNVEENKLASGGNDNNLFVWDG 445
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 248 (92.4 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 75/250 (30%), Positives = 130/250 (52%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL 287
SL++ + C S + V C+++ D I +G +D TIK+W+ + + R L GH V L
Sbjct: 256 SLQR-IHCRSETSKGVYCLQYD-DQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCL 313
Query: 288 ALSTEYALRTGAFDHTGKQYS-SPEEMKKAAL---ERYNKIKGNAPERLVSGSDDFTMFL 343
E + TG+ D T + + + EM + E ++ N +V+ S D ++ +
Sbjct: 314 QYD-ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAV 371
Query: 344 WEPAVSKQPKTR--MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
W+ A R + GH+ VN V F D +++ SAS D++IK+WN +T +FV GH
Sbjct: 372 WDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH 429
Query: 402 VGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 461
+ + + RL++SGS D+T+++WDI + L GH + V + + D +++ S
Sbjct: 430 KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS 485
Query: 462 GGKDRVLKLW 471
G D +K+W
Sbjct: 486 GAYDGKIKVW 495
Score = 223 (83.6 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 72/271 (26%), Positives = 130/271 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GHT +VL + + D R + +GS D+TVR+WD+NT + H VL + ++
Sbjct: 299 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 356
Query: 160 ADGKHLVSGSKAGELQCWD--PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+G +V+ SK + WD T L GH+ + + ++ ++ VSAS
Sbjct: 357 -NGM-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYI-------VSAS 407
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ++W+ S + V L+GH + C+++ D ++ +GS D TI++W+ G +R L
Sbjct: 408 GDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 466
Query: 278 KGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA----------LERYNKI-KG 326
+GH V + + + +GA+D K + + A +E ++ +
Sbjct: 467 EGHEELVRCIRFDNKRIV-SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL 525
Query: 327 NAPE-RLVSGSDDFTMFLWE----PAVSKQP 352
E ++VS S D T+ +W+ PA +P
Sbjct: 526 QFDEFQIVSSSHDDTILIWDFLNDPAAQAEP 556
Score = 222 (83.2 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 72/277 (25%), Positives = 133/277 (48%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQ 270
++ VS +D +IWD S +C L+GHT +V C+++ + VI TGS D T++VW+
Sbjct: 278 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD-ERVIITGSSDSTVRVWDVNT 336
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY--SSPEEMKKAALERYNKIKGNA 328
G+++ L H V L + + T + D + + +SP ++ + ++ N
Sbjct: 337 GEMLNTLIHHCEAVLHLRFNNGMMV-TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 395
Query: 329 PE----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ +VS S D T+ +W + + +T + GH++ + + + + V S S D +I
Sbjct: 396 VDFDDKYIVSASGDRTIKVWNTSTCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTI 452
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG-- 442
+LW+ G + V GH V I + D++ ++SG+ D +KVWD+ L P
Sbjct: 453 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL-VAALDPRAPAGT 509
Query: 443 --------HADEVFAVDWSPDGEKVASGGKDRVLKLW 471
H+ VF + + D ++ S D + +W
Sbjct: 510 LCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 544
Score = 216 (81.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 77/286 (26%), Positives = 133/286 (46%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D +++ SG D T+++WD +T TGH VLC+ + D + +++GS ++ WD
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD 333
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD------VSLRKC 232
TG+ N L H + + +HL V+ SKD +WD ++LR+
Sbjct: 334 VNTGEML-NTLIHHCEAV-------LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV 385
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
++ GH AV V + D I + S D TIKVW T+ + +R L GH + L
Sbjct: 386 LV---GHRAAVNVVDFD-DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR 441
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVS 349
+ +G+ D+T + + LE + ++ +R+VSG+ D + +W+ +
Sbjct: 442 LVV-SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAA 500
Query: 350 KQPKTRMTGH---QQLVNH---VY-FSPDGQWVASASFDKSIKLWN 388
P+ G + LV H V+ D + S+S D +I +W+
Sbjct: 501 LDPRAP-AGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 545
Score = 198 (74.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 79/306 (25%), Positives = 138/306 (45%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V C+ + D + +VSG + ++ WD T + L+GH + + ++ R
Sbjct: 270 VYCLQY--DDQKIVSGLRDNTIKIWDKSTLECK-RILTGHTGSVLCLQYDE-------RV 319
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET---T 269
++ S D R+WDV+ + + L H AV +++ +G++ T S+D +I VW+ T
Sbjct: 320 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPT 378
Query: 270 QGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
L R L GH VN + +Y + D T K +++ L + + G A
Sbjct: 379 DITLRRVLVGHRAAVNVVDFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKR--GIAC 435
Query: 329 ---PERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+RLV SGS D T+ LW+ + + GH++LV + F D + + S ++D I
Sbjct: 436 LQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRF--DNKRIVSGAYDGKI 492
Query: 385 KLWN--------GTTGKF-VAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQK 435
K+W+ G + H G V+++ + D ++S S D T+ +WD
Sbjct: 493 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 550
Query: 436 LKQDLP 441
Q P
Sbjct: 551 AAQAEP 556
Score = 175 (66.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 54/194 (27%), Positives = 94/194 (48%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+V+ I + R+ VN T+ H EAVL + F+ +G + + S D ++ +WD
Sbjct: 317 ERVI-ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWD 373
Query: 137 LNTQTPMFK---CTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+ + T + GH+ V + + D K++VS S ++ W+ T + L+GHK
Sbjct: 374 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHK 430
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
+ I + + R VS S D R+WD+ C+ L GH V C+++ +
Sbjct: 431 RGIACLQYRD-------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 483
Query: 254 IYTGSQDCTIKVWE 267
+ +G+ D IKVW+
Sbjct: 484 V-SGAYDGKIKVWD 496
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 226 (84.6 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 49/150 (32%), Positives = 84/150 (56%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGH 443
+LW+ TTG F GH V +++SAD+R ++SGS+D T+K+W+ + K H
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSH 147
Query: 444 ADEVFAVDWSPDGEK--VASGGKDRVLKLW 471
+ V V +SP+ + S G D+++K+W
Sbjct: 148 TEWVSCVRFSPNSSNPIIVSCGWDKMVKVW 177
Score = 224 (83.9 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 59/188 (31%), Positives = 92/188 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+SAD +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSN-PI--IVSCGWDKMVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS 290
+N+L S
Sbjct: 235 TINALCFS 242
Score = 188 (71.2 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 69/257 (26%), Positives = 114/257 (44%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNR 118
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ ++ + R++ N P +VS D + +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSN-PI-IVSCGWDKMVKV 176
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W A K KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 177 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--G 233
Query: 404 PVYQISWSADSRLLLSGSKDSTLKVWDIR----TQKLKQDL-----PGHADEVFAVDWSP 454
+ +R L + ++K+WD+ +L+QD+ + ++ WS
Sbjct: 234 DTINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSA 293
Query: 455 DGEKVASGGKDRVLKLW 471
DG+ + +G D ++++W
Sbjct: 294 DGQTLFAGYTDNLIRVW 310
Score = 181 (68.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 75/273 (27%), Positives = 118/273 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHSGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S + + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ ++ + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSN-PI-IVSCGWDKMVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWS 411
KT GH +N V SPDG AS D LW+ GK + G G
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDTINALCF 241
Query: 412 ADSRLLLSGSKDSTLKVWDIR----TQKLKQDL 440
+ +R L + ++K+WD+ +L+QD+
Sbjct: 242 SPNRYWLCAATGPSIKIWDLEGKIIVDELRQDI 274
Score = 181 (68.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 77/309 (24%), Positives = 132/309 (42%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G +N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DTINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFVA--------VFRGHVGPVY--QISWSADSRLLLSGSK 422
W+ +A+ SIK+W+ GK + P ++WSAD + L +G
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 423 DSTLKVWDI 431
D+ ++VW +
Sbjct: 304 DNLIRVWQV 312
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 53/186 (28%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C TI HTE V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDT-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ LR+ +I + C W DG ++ G D I+V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 44 (20.5 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D I++W T G
Sbjct: 291 WSADGQTLFAGYTDNLIRVWQVTIG 315
WARNING: HSPs involving 1631 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 473 473 0.00099 118 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1881
No. of states in DFA: 624 (66 KB)
Total size of DFA: 344 KB (2168 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.75u 0.13s 44.88t Elapsed: 00:00:02
Total cpu time: 44.93u 0.13s 45.06t Elapsed: 00:00:03
Start: Tue May 21 02:35:10 2013 End: Tue May 21 02:35:13 2013
WARNINGS ISSUED: 2