BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011982
(473 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D952|EVPL_MOUSE Envoplakin OS=Mus musculus GN=Evpl PE=2 SV=3
Length = 2035
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 49/264 (18%)
Query: 78 RQHLLQREAILEETVKHLRNERESHIQKEATLEGTVQQLQNECDLYKEKVATLEETIQQL 137
R LQ + I+EE VK ++K+ LE + + L+ E D K +V L Q L
Sbjct: 1453 RPPALQEKIIMEEVVK---------LEKDPDLERSTEALRRELDQEKNRVTELHRECQGL 1503
Query: 138 QRQNDLRMQKEATLEETIKQLRNQNDLHIQREGGLEMNIANLQSEKEFW--LQKEAALEQ 195
Q Q DL +QK + E+TI + + ++++ LE A + W L +E A +
Sbjct: 1504 QVQVDL-LQKTKSQEKTI----YKEVIRVEKDPVLEGERARV------WEILNRERAARK 1552
Query: 196 KISQLRDESAALNMKRASLEERLKLLEADKDSWTQMESVSKETIAGLSVDITQLRMQVVE 255
R+E SL+ER+ EA + SW++ E+ + S D +L+ Q+ E
Sbjct: 1553 G----REEDVR------SLQERIDRAEALRRSWSREEAELQRARDQASQDCGRLQRQLRE 1602
Query: 256 LEESRNNLLQENRQLKENVSSLRSQLSSDESKKLQHATSEQKDFSTQIEAAGALIDKLIT 315
LE+ + Q+ RQL+E L + S+ K Q + + TQ+EAA ++
Sbjct: 1603 LEQQKQ---QKARQLQEEGRLLSQKTESERQKAAQRSQA-----VTQLEAA------ILQ 1648
Query: 316 ENIELVEK---VNDLSVKLDRQSV 336
E ++ EK + DL K+ R+ +
Sbjct: 1649 EKDKIYEKERTLRDLHTKVSREEL 1672
>sp|Q09778|TSC1_SCHPO Tuberous sclerosis 1 protein homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tsc1 PE=1 SV=1
Length = 899
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 47 ASEPADI---QNVQVDADRHQSNGAESANLAEAERQHLLQREAILEETVKHLRNERESHI 103
ASEP I QN + H + + A L+ E + + + H + E +
Sbjct: 469 ASEPFSISWPQNPSISGSVHSATTFDKAQLSNTEDSY---------DNISHGTSYSEG-V 518
Query: 104 QKEATLEGTVQQLQNECDLYKEKVATLEETIQQLQRQNDLRMQKEATLEETIKQLRNQND 163
++G ++ N +L E +++ +TI++LQR + L +Q E E+ ++Q QN
Sbjct: 519 SSIHMVKG--ERGSNNLELTSESLSSTNDTIRRLQR-DLLFLQNELRFEKFVRQQHLQNI 575
Query: 164 LHIQREGGLEMNIAN-----LQSEKEFWLQKEAALEQKISQLRDES-AALNMKRASLEE- 216
+ RE L+M + + L + K + Q E L +I + R ES AALN +R E
Sbjct: 576 GKLHREHILDMAVESERQKLLLTNKRYKAQIEL-LNSEIDKHRSESQAALN-RRVKWEND 633
Query: 217 ---RLKLLEADKDSWTQMESVSKETIAGLSVDITQLRMQVVELEESRNNL 263
++K L +K +W ES K +I L + +R +++ S+N L
Sbjct: 634 FNNKIKALREEKKAWKSEESELKSSIESLISQLESIRNSQIDIAFSKNQL 683
>sp|O96133|YB145_PLAF7 Uncharacterized protein PFB0145c OS=Plasmodium falciparum (isolate
3D7) GN=PFB0145c PE=2 SV=1
Length = 1979
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 18/200 (9%)
Query: 235 SKETIAGLSVDITQLRMQVVELEESRNNLLQENRQLKENVSSLRSQLSSD---ESKKLQH 291
S+ + L +I L +V+EL +N L++EN +L V + +L D + K+++
Sbjct: 1143 SRSNLFQLKNEICSLTTEVMELNNKKNELIEENNKLNL-VDQGKKKLKKDVEKQKKEIEK 1201
Query: 292 ATSEQKDFSTQIEAAGALIDKLITENIELVEKVNDLSVKLDRQSVAAGLSSAIGSDAVTA 351
+ + QI+ ++KL ENIEL+ NDL+ K D + + D +
Sbjct: 1202 LNKQLTKCNKQIDELNEEVEKLNNENIELITYSNDLNNKFDMKENNLMMKLDENEDNIKK 1261
Query: 352 LTSDTEPM--------SESSDNMSSLNNRLETQGVVAVKEDRNGINGVHAD----PPPLV 399
+ S + M E N++ +NN + + +K N +N + D +
Sbjct: 1262 MKSKIDDMEKEIKYREDEKKRNLNEINNLKKKNEDMCIK--YNEMNIKYGDICVKYEEMS 1319
Query: 400 LSSSEAEYSGEIVQIPLDDK 419
L+ E E +++ D+K
Sbjct: 1320 LTYKETSLKYEQIKVKYDEK 1339
>sp|Q54IK9|HOOK_DICDI Protein hook homolog OS=Dictyostelium discoideum GN=hook PE=3 SV=1
Length = 734
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 116 LQNECDLYKEKVATLEETIQQLQRQNDLRMQKEATLEETIKQLRNQNDLHIQREGGLEMN 175
L++E D+ +EK A E T ++L++ ++++ L++ IK+L +QND +IQ+ LE
Sbjct: 331 LRDEIDILREKAANAEATEEKLKKHQK-KIEEIGDLKKKIKELEDQNDSYIQQTLDLE-- 387
Query: 176 IANLQSEKEFWLQKEAALEQKISQLRDESAALNMK-------RASLEERLKLLEADKDS 227
L + Q ++ +Q+IS L+ E A L + R L E L +E ++DS
Sbjct: 388 -EQLSKNNTYRTQADSG-KQQISSLKIELAKLELSLKSIKEDRDKLSESLNTVELERDS 444
>sp|A4IFI1|CC157_BOVIN Coiled-coil domain-containing protein 157 OS=Bos taurus GN=CCDC157
PE=2 SV=2
Length = 688
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 38 GQKDDVRSQASE-PADIQNVQVDADRHQSNGAESANLAEAERQHLLQREAILEETVKHLR 96
GQKD +R Q E +Q Q R + E ERQ LL + L+ V L
Sbjct: 302 GQKDRLRMQVGELEQALQEEQAARQRQAQEAEQHRAQWERERQQLLAETSDLKTKVATLE 361
Query: 97 NERESHIQKEATLEGTVQQLQNECDLYKEKVATLEETIQQLQRQNDLRMQKEATLEETIK 156
E + + +E QQLQ E + E E +Q L++Q +L + + I+
Sbjct: 362 GELKQQRESTQAVESKAQQLQAEAEHRLEA----ERQVQHLEQQVELLAGRLDGASQQIR 417
Query: 157 QLRNQNDLHIQREGGLEMNIANLQSEKEFWLQKEAALEQKISQLRDESAALNMKRASLEE 216
+ D R + + +LQ+++ LQ+ +L+Q+ +LR +RA +EE
Sbjct: 418 WASTELDKEKARVDSMVRHQESLQAKQRALLQQLDSLDQEREELRGSLDEAEAQRAHVEE 477
Query: 217 RLKLLEADKDSWTQMESVSKETIAGLSVDITQLRMQVVELEESRNNLL 264
+L+ ++ +++ T L + I++L ++VEL E R LL
Sbjct: 478 QLQSVQGEREQAT----------TDLRLTISELERELVELRE-RERLL 514
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.123 0.314
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,554,729
Number of Sequences: 539616
Number of extensions: 6199258
Number of successful extensions: 39338
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 2668
Number of HSP's that attempted gapping in prelim test: 29520
Number of HSP's gapped (non-prelim): 7806
length of query: 473
length of database: 191,569,459
effective HSP length: 121
effective length of query: 352
effective length of database: 126,275,923
effective search space: 44449124896
effective search space used: 44449124896
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 63 (28.9 bits)