BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011986
(473 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O29470|Y788_ARCFU Uncharacterized transporter AF_0788 OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=AF_0788 PE=3 SV=1
Length = 308
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 27/294 (9%)
Query: 131 KKVRSIILLNAITVVYASNIPVIKEVEAITDPSAFTVVRFALSAIPFIPFVLRARDDVHT 190
K++ + + L + +++ S PV+K P AF VRF ++ + F+PF L+ D
Sbjct: 39 KRLYADLGLALVALIWGSTFPVVKIALDSMSPFAFNTVRFFIACLFFLPF-LKGWD---- 93
Query: 191 RNAGFELGLWVSLGYLMQALGLETSDAGRASFISMFTVIVVPLLDGMLGA-IVPARTWFG 249
GF++G+ LGY Q +GL+ + A A FI+ V++ P++ ++ + R G
Sbjct: 94 FKDGFKIGIASFLGYTFQTVGLDYTTATNAGFITSTYVVLAPIISWLVYKDVFDKRDVSG 153
Query: 250 AVMSILGVALLESSGSPPSVGDLLNFLSAVFFGIHMLRTEHISRSTNKKDFLPLLGYEVC 309
+++ +G L S S ++GD+L A+FFG + H SR +N L ++
Sbjct: 154 VLLAFVGFYFL-SGYSGFNIGDILMLFCALFFGAEIAMISHYSRLSNPT---MLAFWQSF 209
Query: 310 VIALLSAVWYFIGGSLGGTQGSDPSSWTWTMFWDWMVAFPWIPALYTGIFSTGLCLWIEM 369
I +LSA + + +T T F + L T F+T + ++
Sbjct: 210 AIFILSAPF---------------AVFTTTKFEINTTVI--LCLLITAFFATFVAKMLQN 252
Query: 370 AAMRDVSATETAIIYGLEPVWGAGFAWFILGERWGATGWLGAALVLVGSLTVQI 423
+++ A+I LE V+ F+ +L E + GA L+L+ + V +
Sbjct: 253 WLQSYTKSSDAAVILSLEGVFAHLFSVAVLAEILTPVQYFGAFLILLAVIIVSL 306
>sp|O31493|YDZE_BACSU Putative permease-like protein YdzE OS=Bacillus subtilis (strain
168) GN=ydzE PE=5 SV=1
Length = 78
Score = 44.3 bits (103), Expect = 0.002, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 354 LYTGIFSTGLCLWIEMAAMRDVSATETAIIYGLEPVWGAGFAWFILGERWGATGWLGAAL 413
+Y GI ST + ++ ++A+ + + +P+ G W +LGE+ G T W+G+ L
Sbjct: 1 MYLGIVSTACAFLLWNHGLQLLNASSGGLFFFFQPLVGTLLGWILLGEQIGGTFWIGSFL 60
Query: 414 VLVGSLTV 421
+L G L V
Sbjct: 61 ILSGVLLV 68
>sp|Q2G5E7|IF2_NOVAD Translation initiation factor IF-2 OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=infB PE=3 SV=1
Length = 875
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 60 FSSVTCTKSVSRPRKWIDSDTACSSKPNTVAYCNSKNDVTSVSNSKDGVRARSFKSLFGK 119
F+ V + RP T K VT N +G RARS +L
Sbjct: 213 FTPVAPAAPIKRPELAAKKPAHPQRDRKTEDRRGGKLTVTRALNEDEGARARSLAALKRA 272
Query: 120 RSVWRRILFA------SKKVRSIILLNAITVVYASN 149
R RR FA K+VR +++ +AITV +N
Sbjct: 273 REKERRAHFAGQSQPREKQVRDVVVPDAITVQDLAN 308
>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1
SV=1
Length = 374
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 32/206 (15%)
Query: 261 ESSGSPPSVGDLLNFLSAVFFGIHMLRTEHISRSTNKKDFLPLLGYEVCVIALLSAVWYF 320
++SGS +GD+L L A + I + E+I + ++++FL ++G +I+
Sbjct: 189 DNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQEFLGMVGLFGTIIS-------- 240
Query: 321 IGGSLGGTQGSDPSSWTWTMFWDWMVAFPWIPALYTGIFSTGLCLWIEM-AAMRDVSATE 379
G L + D +S + WDW +A L+ CL+ M ++ SAT
Sbjct: 241 -GIQLLIVEYKDIAS----IHWDWKIAL-----LFVAFALCMFCLYSFMPLVIKVTSATS 290
Query: 380 TAIIYGLEPVWGAGFAWFILGERWGATGWLGAALVLVGSLTVQIFGSSSPSNCNEDEKRS 439
+ ++ F+ G ++ L +++VG I S+P+ E + S
Sbjct: 291 VNLGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGF----ILYCSTPTRTAEPAESS 346
Query: 440 ---------KKADQKLELNKQNGFSS 456
KLE N Q S+
Sbjct: 347 VPPVTSIGIDNLGLKLEENLQETHSA 372
>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200
PE=2 SV=1
Length = 383
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 354 LYTGIFSTGLCLWIEMAAMRDVSATETAIIYGLEPVWGAGFAWFILGERWGATGWLGAAL 413
LY GI ++GL ++++ + A+ L+ + A A+ ILG++ + G +GA
Sbjct: 276 LYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVGAVF 335
Query: 414 VLVGSLTVQIFGSSSPSNCN-EDEKRSKKADQKLELNKQNGFSSSPAAV 461
+++G L + ++G + E+ ++ ++ K L Q+ S+S + V
Sbjct: 336 IMLG-LYLVLWGKNEERKLALEESQQDPESLTKHLLEAQHKKSNSESEV 383
>sp|Q6NMB7|WTR7_ARATH WAT1-related protein At1g43650 OS=Arabidopsis thaliana GN=At1g43650
PE=2 SV=1
Length = 343
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 342 WDWMVAFPWIPALYTGIFSTGLCLWIEMAAMRDVSATETAIIYGLEPVWGAGFAWFILGE 401
W P + Y GI TGL W+++ A+ TA+ L + + F+ E
Sbjct: 235 WKIEFGLPLLSMAYCGIMVTGLTYWLQVWAIEKKGPVFTALYTPLALILTCIVSSFLFKE 294
Query: 402 RWGATGWLGAALVLVGSLTVQIFGSSSPSNCNEDEKRSKKADQK 445
+ G +G A++LV L + ++G + E ++ +K QK
Sbjct: 295 TF-YLGSVGGAVLLVCGLYLGLWGKTKE---EEIQRYGEKQSQK 334
>sp|Q8GXB4|WTR2_ARATH WAT1-related protein At1g09380 OS=Arabidopsis thaliana GN=At1g09380
PE=2 SV=1
Length = 374
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 343 DWMVAFP--WIPALYTGIFSTGLCLWIEMAAMRDVSATETAIIYGLEPVWGAGFAWFILG 400
DW ++ P +I ALY G+ ++ L + AM+ ++ L V A F+W +L
Sbjct: 242 DWSLSSPLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWALLE 301
Query: 401 ERWGATGWLGAALVLVG 417
E+ ++G+ALV++G
Sbjct: 302 EKLYTGTFMGSALVVIG 318
>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2
SV=2
Length = 408
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 22/101 (21%)
Query: 227 TVIVVPLLDGMLGAIVPARTWF------------GAVMSILGVALL----------ESSG 264
T+ + LLD + +V +WF G V+ ILG+ + + +G
Sbjct: 154 TLTSIQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCILGMGCMVGADVLVGRHQGAG 213
Query: 265 SPPSVGDLLNFLSAVFFGIHMLRTEHISRSTNKKDFLPLLG 305
VGDLL A +GI + E+I R+ ++ +FL ++G
Sbjct: 214 ENKLVGDLLVLGGATLYGISNVWEEYIIRTLSRVEFLGMIG 254
>sp|Q9LI65|WTR24_ARATH WAT1-related protein At3g30340 OS=Arabidopsis thaliana GN=At3g30340
PE=2 SV=1
Length = 364
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 344 WMVA--FPWIPALYTGIFSTGLCLWIEMA-AMRDVSATETAIIYGLEPVWGAGFAWFILG 400
W+V F + LY+GI +GLC ++ M+ +R A T+ L V+ A F++ L
Sbjct: 243 WVVKDKFQVLALLYSGIVGSGLC-YVGMSWCLRQRGAVFTSSFIPLIQVFAAIFSFSFLH 301
Query: 401 ERWGATGWLGAALVLVGSLTVQIFGSSSPSNCNEDEKRSKKADQKLELNKQNGFSSSPAA 460
E+ +G+ +++VG L + ++G S +D+ S + L+L+ + G ++P
Sbjct: 302 EQIYCGSVIGSMVIIVG-LYILLWGKS------KDKSASVTKQEPLDLDIE-GCGTAPKE 353
Query: 461 VTS 463
+ S
Sbjct: 354 LNS 356
>sp|O31540|YETK_BACSU Uncharacterized transporter YetK OS=Bacillus subtilis (strain 168)
GN=yetK PE=3 SV=1
Length = 330
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 355 YTGIFSTGLCLWIEMAAMRDVSATETAIIYGLEPVWGAGFAWFILGERWGATGWLGAALV 414
+TG+F +CL + ++ + TE+ I+ P+ ++F+L E+ +G L
Sbjct: 98 FTGVFLFSICL---LYGVQYTTGTESGILTSTTPMLIGILSFFLLREKIEKKTLIGILLA 154
Query: 415 LVGSLTVQIFGSSS 428
+ G + + +FG+ S
Sbjct: 155 VCGVMAINLFGAGS 168
>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2
SV=2
Length = 375
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 261 ESSGSPPSVGDLLNFLSAVFFGIHMLRTEHISRSTNKKDFLPLLGYEVCVIALLSAVWYF 320
++SGS +GD+L L A + + + E+I + ++++FL ++G +I+
Sbjct: 189 DNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLSRQEFLGMVGLFGTIIS-------- 240
Query: 321 IGGSLGGTQGSDPSSWTWTMFWDWMVAFPWIPALYTGIFSTGLCLWIEM-AAMRDVSATE 379
G L + D + WDW +A L+ CL+ M ++ SAT
Sbjct: 241 -GIQLLIVEYKDIARIQ----WDWKIAL-----LFVAFALCMFCLYSFMPLVIKVTSATS 290
Query: 380 TAIIYGLEPVWGAGFAWFILGERWGATGWLGAALVLVGSLTVQIFGSSSPSNCNEDEKRS 439
+ ++ F F+ ++ L +++VG I S+P+ E + S
Sbjct: 291 VNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGF----ILYCSTPTRTVEPPESS 346
>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2
SV=1
Length = 408
Score = 32.3 bits (72), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 22/101 (21%)
Query: 227 TVIVVPLLDGMLGAIVPARTWF------------GAVMSILGVALL----------ESSG 264
T+ V LLD + +V +WF G V+ ILG+ + + +G
Sbjct: 154 TLTSVQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCILGMGCMVGADVLVGRHQGAG 213
Query: 265 SPPSVGDLLNFLSAVFFGIHMLRTEHISRSTNKKDFLPLLG 305
VGDLL A +GI + E I R+ ++ +FL ++G
Sbjct: 214 ENKLVGDLLVLGGATLYGISNVWEESIIRTLSRVEFLGMIG 254
>sp|A9MRT8|MDTI_SALAR Spermidine export protein MdtI OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.0 bits (71), Expect = 9.6, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 357 GIFSTGLCLWIEMAAMRDVSATETAIIYGLEPVWGAGFA--------WFILGERWGATGW 408
GI S L A + V + ++ Y L WG GF W + G+R GW
Sbjct: 38 GILSLAAVLAAFSALSQAVKGIDLSVAYAL---WG-GFGIAATLAAGWVLFGQRLNPKGW 93
Query: 409 LGAALVLVGSLTVQI 423
+G L+LVG + +++
Sbjct: 94 VGVVLLLVGMIMIKL 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,633,558
Number of Sequences: 539616
Number of extensions: 6720873
Number of successful extensions: 16358
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 16334
Number of HSP's gapped (non-prelim): 88
length of query: 473
length of database: 191,569,459
effective HSP length: 121
effective length of query: 352
effective length of database: 126,275,923
effective search space: 44449124896
effective search space used: 44449124896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)