BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011988
(473 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/475 (70%), Positives = 380/475 (80%), Gaps = 5/475 (1%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-NVKTKHPQLQYEAKLYKILQ 59
MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL NVKTKHPQL YE+K+Y+ILQ
Sbjct: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQ 60
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
GGTGIPN+RWFGVEGDYNVLV+DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH
Sbjct: 61 GGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 120
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK+YRDT+THQHIPYRENKNLTGTARYA
Sbjct: 121 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 180
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 239
S+NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT V+TSIEAL
Sbjct: 181 SVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL 240
Query: 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQV 299
CRGYPTEFASYFHYCRSLRFDDKPDY+YLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ+
Sbjct: 241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQI 300
Query: 300 STXXXXXXXXXXXXXXXXXXXXNVDRQSGAEEGRHTGWSSADPSRRRNSGPLGNSANLSK 359
++ DRQSG +EGR +GWSS D RRR P+ + L+K
Sbjct: 301 ASAPPRAVGHGAGPSGLAPPALQNDRQSGVDEGRTSGWSSMD--RRRAPPPIASVGTLAK 358
Query: 360 QKSPMANDPAFSKDAMMXXXX-XXXXXXXXXXVAVPNSREAAVVGSDTDPSRPRTTDASP 418
QK+P+ ND +FSK+ ++ AV +SR+ + + ++PSR R TDASP
Sbjct: 359 QKAPVGNDASFSKEPVISASNFLGRSSGSSRRPAVSSSRDVMPIDT-SEPSRTRATDASP 417
Query: 419 GAFQKIXXXXXXXXXXXXENRHTTSGRSTSNIKNFESTLRGIESLHFNNNERVHH 473
GAF++ E +H++S R +SN+KN+ES L+GIE L+F+ +ERV +
Sbjct: 418 GAFRRTSGPQKSSPVNSAEPKHSSSARHSSNVKNYESALKGIEGLNFDGDERVQY 472
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 220/298 (73%), Positives = 258/298 (86%), Gaps = 1/298 (0%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-VKTKHPQLQYEAKLYKILQ 59
ME RVGN++RLGRKIGSGSFG+IYLGT+I EEVAIKL VKTKHPQL E+K+YK++Q
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
GG GIP +RW G EGDYNV+V++LLGPSLEDLFNFCSRK SLKTVL+LADQMI+R+E++H
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
SK+F+HRD+KPDNFLMGLG++ N VYIIDFGLAK+YRD THQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 239
S+NTHLGIEQSRRDDLESLGYVLMYF GSLPWQGLKA T +ST IE L
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQS 297
C+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK+ S
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 298
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 219/294 (74%), Positives = 256/294 (87%), Gaps = 1/294 (0%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-VKTKHPQLQYEAKLYKILQ 59
ME RVGN++RLGRKIGSGSFG+IYLGT+I EEVAIKL VKTKHPQL E+K+YK++Q
Sbjct: 3 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 62
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
GG GIP +RW G EGDYNV+V++LLGPSLEDLFNFCSRK SLKTVL+LADQMI+R+E++H
Sbjct: 63 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
SK+F+HRD+KPDNFLMGLG++ N VYIIDFGLAK+YRD THQHIPYRENKNLTGTARYA
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 239
S+NTHLGIEQSRRDDLESLGYVLMYF GSLPWQGLKA T +ST IE L
Sbjct: 183 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 242
Query: 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 293
C+GYP+EFA+Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK
Sbjct: 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 296
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 477 bits (1227), Expect = e-135, Method: Compositional matrix adjust.
Identities = 218/294 (74%), Positives = 256/294 (87%), Gaps = 1/294 (0%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-VKTKHPQLQYEAKLYKILQ 59
ME RVGNK+RLGRKIGSGSFG+IYLG NI + EEVAIKL VKTKHPQL E+K YK++Q
Sbjct: 3 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 62
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
GG GIP+++W G EGDYNV+V++LLGPSLEDLFNFCSRK SLKTVL+LADQMI+R+E++H
Sbjct: 63 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
SK+F+HRD+KPDNFLMGLG++ N VYIIDFGLAK+YRD THQHIPYRENKNLTGTARYA
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 239
S+NTHLGIEQSRRDDLESLGYVLMYF GSLPWQGLKA T +ST IE L
Sbjct: 183 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 242
Query: 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 293
C+GYP+EF++Y ++CRSLRFDDKPDY+YL++LFR+LF R+GF +DYVFDW +LK
Sbjct: 243 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 296
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 344 bits (882), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 164/288 (56%), Positives = 210/288 (72%), Gaps = 3/288 (1%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-VKTKHPQLQYEAKLYKILQGGTG 63
+G FR+G+KIG G+FGE+ LG N+ TNE VAIKL +K++ PQL E + YK L G
Sbjct: 2 MGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEG 61
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+P + +FG G YN +V++LLGPSLEDLF+ C R +LKTVLM+A Q+I R+E+VH+KS
Sbjct: 62 VPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSL 121
Query: 124 LHRDIKPDNFLMGL--GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
++RD+KP+NFL+G +R + ++IIDFGLAK Y D T +HIPYRE+K+LTGTARY S+
Sbjct: 122 IYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 181
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 241
NTHLG EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IE LC
Sbjct: 182 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 241
Query: 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDW 289
+P E A+Y Y R L F +KPDY YL++LF DLF R GF FDY +DW
Sbjct: 242 NFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVFDYEYDW 289
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 342 bits (876), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/288 (58%), Positives = 213/288 (73%), Gaps = 4/288 (1%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-VKTKHPQLQYEAKLYKILQGGTG 63
VG FR+G+KIG G+FGE+ LG N+ TNE VAIKL +K++ PQL E + YK L G G
Sbjct: 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDG 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
IP + +FG G YN +V++LLGPSLEDLF+ C R SLKTVLM+A Q+I+R+E+VHSK+
Sbjct: 67 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126
Query: 124 LHRDIKPDNFLMGL-GRRANQV-YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
++RD+KP+NFL+G G + QV +IIDFGLAK Y D T +HIPYRE+K+LTGTARY S+
Sbjct: 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 186
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 241
NTHLG EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IE LC
Sbjct: 187 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 246
Query: 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDW 289
+P E A+Y Y R L F +KPDY YL++LF DLF R+G+ FDY +DW
Sbjct: 247 NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 293
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 340 bits (872), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/288 (58%), Positives = 212/288 (73%), Gaps = 4/288 (1%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-VKTKHPQLQYEAKLYKILQGGTG 63
VG FR+G+KIG G+FGE+ LG N+ TNE VAIKL +K++ PQL E + YK L G G
Sbjct: 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDG 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
IP + +FG G YN +V++LLGPSLEDLF+ C R SLKTVLM+A Q+I+R+E+VHSK+
Sbjct: 67 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126
Query: 124 LHRDIKPDNFLMGL-GRRANQV-YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
++RD+KP+NFL+G G + QV +IIDF LAK Y D T +HIPYRE+K+LTGTARY S+
Sbjct: 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSI 186
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 241
NTHLG EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IE LC
Sbjct: 187 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 246
Query: 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDW 289
+P E A+Y Y R L F +KPDY YL++LF DLF R+G+ FDY +DW
Sbjct: 247 NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 293
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 340 bits (871), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/288 (58%), Positives = 212/288 (73%), Gaps = 4/288 (1%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-VKTKHPQLQYEAKLYKILQGGTG 63
VG FR+G+KIG G+FGE+ LG N+ TNE VAIKL +K++ PQL E + YK L G G
Sbjct: 28 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDG 87
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
IP + +FG G YN +V++LLGPSLEDLF+ C R SLKTVLM+A Q+I+R+E+VHSK+
Sbjct: 88 IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 147
Query: 124 LHRDIKPDNFLMGL-GRRANQV-YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
++RD+KP+NFL+G G + QV +IIDF LAK Y D T +HIPYRE+K+LTGTARY S+
Sbjct: 148 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSI 207
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 241
NTHLG EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IE LC
Sbjct: 208 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 267
Query: 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDW 289
+P E A+Y Y R L F +KPDY YL++LF DLF R+G+ FDY +DW
Sbjct: 268 NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 314
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 204/291 (70%), Gaps = 3/291 (1%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK-TKHPQLQYEAKLYKILQGGTG 63
VG +++GR+IG GSFG I+ GTN+ N++VAIK + + PQL+ E + YK+L G TG
Sbjct: 7 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTG 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
IPN+ +FG EG +NVLVIDLLGPSLEDL + C RK S+KTV M A QM+ RV+ +H KS
Sbjct: 67 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 126
Query: 124 LHRDIKPDNFLMGL--GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
++RDIKPDNFL+G + AN +Y++DFG+ K YRD T QHIPYRE KNL+GTARY S+
Sbjct: 127 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 186
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 241
NTHLG EQSRRDDLE+LG+V MYFLRGSLPWQGLKA T ST + LC
Sbjct: 187 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA 246
Query: 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTIL 292
G+P EF Y HY R+L FD PDY YL+ LF + R D FDW +L
Sbjct: 247 GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLL 297
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 336 bits (861), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 204/291 (70%), Gaps = 3/291 (1%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK-TKHPQLQYEAKLYKILQGGTG 63
VG +++GR+IG GSFG I+ GTN+ N++VAIK + + PQL+ E + YK+L G TG
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTG 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
IPN+ +FG EG +NVLVIDLLGPSLEDL + C RK S+KTV M A QM+ RV+ +H KS
Sbjct: 68 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 127
Query: 124 LHRDIKPDNFLMGL--GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
++RDIKPDNFL+G + AN +Y++DFG+ K YRD T QHIPYRE KNL+GTARY S+
Sbjct: 128 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 187
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 241
NTHLG EQSRRDDLE+LG+V MYFLRGSLPWQGLKA T ST + LC
Sbjct: 188 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA 247
Query: 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTIL 292
G+P EF Y HY R+L FD PDY YL+ LF + R D FDW +L
Sbjct: 248 GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLL 298
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 335 bits (860), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 162/287 (56%), Positives = 211/287 (73%), Gaps = 8/287 (2%)
Query: 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-VKTKHPQLQYEAKLYKIL-QGGTGIPNL 67
R+G+KIG G+FGE+ LG N+ TNE VAIKL +K++ PQL E + YK L G G+P +
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQV 62
Query: 68 RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 127
+FG G YN +V++LLGPSLEDLF+ C R +LKTVLM+A Q+++R+E+VHSK+ ++RD
Sbjct: 63 YYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRD 122
Query: 128 IKPDNFLMGLGRRANQ----VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT 183
+KP+NFL +GR+ N+ ++IIDFGLAK Y D T +HIPYRE+K+LTGTARY S+NT
Sbjct: 123 VKPENFL--IGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINT 180
Query: 184 HLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
HLG EQSRRDDLE+LG++ MYFLRGSLPWQGLKA T +T IEALC +
Sbjct: 181 HLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALCENF 240
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWT 290
P E A+Y Y R L F +KPDY YL+ LF DLF ++G+ FDY +DW
Sbjct: 241 PEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFDYAYDWV 287
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 140/293 (47%), Gaps = 31/293 (10%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVA---IKLNVKTKHPQLQYEAKLYKILQGGT 62
GN++ LG+KIGSG FG IYL E+ A +K+ + P L E K Y+ +
Sbjct: 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP-LFSELKFYQRVAKKD 94
Query: 63 GIP------NLRWFGVE------------GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTV 104
I L + G+ Y +V++ LG L+ + + + TV
Sbjct: 95 CIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKI-SGQNGTFKKSTV 153
Query: 105 LMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164
L L +M++ +E++H ++H DIK N L+G + +QVY+ D+GL+ RY H+
Sbjct: 154 LQLGIRMLDVLEYIHENEYVHGDIKAANLLLGY-KNPDQVYLADYGLSYRYCPNGNHKQ- 211
Query: 165 PYREN--KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW-QGLKAGTXX 221
Y+EN K GT + S++ H G+ SRR D+E LGY ++ +L G LPW Q LK
Sbjct: 212 -YQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270
Query: 222 XXXXXXXXXXVSTSI--EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272
+ S+ A E A + SL +D+KP+Y LK++
Sbjct: 271 QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 30/293 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLG-----TNIQTNEEVAIKLNVKTKHPQLQYEAKLYK----- 56
++++G IG G FG IYL ++ ++ +K+ P L E K Y+
Sbjct: 35 KEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAKP 93
Query: 57 -ILQGGTGIPNLRWFGVEG------------DYNVLVIDLLGPSLEDLFNFCSRKLSLKT 103
+Q L++ GV Y +++D G L+ ++ +++ S KT
Sbjct: 94 EQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKT 153
Query: 104 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163
VL L+ ++++ +E++H ++H DIK N L+ + +QVY++D+GLA RY H+
Sbjct: 154 VLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNPDQVYLVDYGLAYRYCPEGVHKE 212
Query: 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ-GLKAGTXXX 222
+ GT + S++ H G+ SRR DLE LGY ++ +L G LPW+ LK
Sbjct: 213 YKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272
Query: 223 XXXXXXXXXVSTSIEALC---RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272
+++ ++ C + P E A Y + L + +KP Y L+ +
Sbjct: 273 DSKIRYRENIASLMDK-CFPEKNKPGEIAKYMETVKLLDYTEKPLYENLRDIL 324
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 30/293 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLG-----TNIQTNEEVAIKLNVKTKHPQLQYEAKLYK----- 56
++++G IG G FG IYL ++ ++ +K+ P L E K Y+
Sbjct: 35 KEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAKP 93
Query: 57 -ILQGGTGIPNLRWFGVEG------------DYNVLVIDLLGPSLEDLFNFCSRKLSLKT 103
+Q L++ GV Y +++D G L+ ++ +++ S KT
Sbjct: 94 EQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKT 153
Query: 104 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163
VL L+ ++++ +E++H ++H DIK N L+ + +QVY++D+GLA RY H+
Sbjct: 154 VLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNPDQVYLVDYGLAYRYCPEGVHKE 212
Query: 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ-GLKAGTXXX 222
+ GT + S++ H G+ SRR DLE LGY ++ +L G LPW+ LK
Sbjct: 213 YKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272
Query: 223 XXXXXXXXXVSTSIEALC---RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272
+++ ++ C + P E A Y + L + +KP Y L+ +
Sbjct: 273 DSKIRYRENIASLMDK-CFPEKNKPGEIAKYMETVKLLDYTEKPLYENLRDIL 324
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 28/311 (9%)
Query: 9 FRLGRKIGSGSFGEIYLG-----TNIQTNEEVAIKLNVKTKHPQLQYEAKLYK------I 57
+++G IG G FG IYL ++ ++ +K+ P L E K Y+
Sbjct: 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAKPEQ 95
Query: 58 LQGGTGIPNLRWFGVEG------------DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVL 105
+Q L++ GV Y +++D G L+ ++ +++ S KTVL
Sbjct: 96 IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVL 155
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165
L+ ++++ +E++H ++H DIK N L+ + +QVY++D+GLA RY H+
Sbjct: 156 QLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNPDQVYLVDYGLAYRYCPEGVHKAYA 214
Query: 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ-GLKAGTXXXXX 224
+ GT + S++ H G+ SRR DLE LGY ++ +L G LPW+ LK
Sbjct: 215 ADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDS 274
Query: 225 XXXXXXXVSTSIEAL--CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQ 282
+++ ++ P E A Y + L + +KP Y L+ + G +
Sbjct: 275 KIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334
Query: 283 FDYVFDWTILK 293
D D ++++
Sbjct: 335 DDGKLDLSVVE 345
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 14/224 (6%)
Query: 63 GIPNLRWFGVEGD-YNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHS 120
IP FGV D Y LV+ LG SL+ + + LS ++VL +A ++++ +EF+H
Sbjct: 118 AIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE 177
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT--GTARY 178
++H ++ +N + +QV + +G A RY + +H+ Y E G +
Sbjct: 178 NEYVHGNVTAENIFVD-PEDQSQVTLAGYGFAFRY--CPSGKHVAYVEGSRSPHEGDLEF 234
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEA 238
SM+ H G SRR DL+SLGY ++ +L G LPW T
Sbjct: 235 ISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVG 294
Query: 239 LCRGY--PTE-FASYFHYCRSLRFDDKPDYAYLKR----LFRDL 275
C + P+E Y +L +++KP YA L+ L +DL
Sbjct: 295 PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 28/223 (12%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK--TKHPQLQYEAKLYKILQGGT 62
+ + F RK+GSG+FG+++L + E IK K ++ P Q EA++ ++L+
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEI-EVLKSLD 78
Query: 63 GIPNLRWFGVEGDYNVLVIDLL----GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVE 116
++ F V DY+ + I + G LE + + +R LS V L QM+N +
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
+ HS+ +H+D+KP+N L + + IIDFGLA+ ++ + +H + N GTA
Sbjct: 139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK---SDEH-----STNAAGTA 190
Query: 177 RYASMNTHLGIEQSRRD-----DLESLGYVLMYFLRGSLPWQG 214
Y + E +RD D+ S G V+ + L G LP+ G
Sbjct: 191 LY------MAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTG 227
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 153
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P +L GT Y
Sbjct: 154 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRDDLCGTLDYLPP 201
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 132
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 133 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 180
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 153
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 154 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 201
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 128
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L+GT Y
Sbjct: 129 RVIHRDIKPENLLLG---SAGELKIADFGWS---------CHAPSSRRTTLSGTLDYLPP 176
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 128
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P +L GT Y
Sbjct: 129 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPP 176
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 132
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P +L GT Y
Sbjct: 133 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPP 180
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 127
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P +L GT Y
Sbjct: 128 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPP 175
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 127
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P +L GT Y
Sbjct: 128 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTDLCGTLDYLPP 175
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 144
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 145 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 192
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 132
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 133 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 180
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 127
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 128 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTELCGTLDYLPP 175
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 130
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 131 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 178
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 127
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 128 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 175
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 128
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 129 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRDTLCGTLDYLPP 176
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 129
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 130 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRXXLCGTLDYLPP 177
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 130
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P +L GT Y
Sbjct: 131 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRDDLCGTLDYLPP 178
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 130
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 131 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRAALCGTLDYLPP 178
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 126
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 127 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 174
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 130
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 131 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 178
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 131
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 132 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 179
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 127
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 128 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRAALCGTLDYLPP 175
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 130
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 131 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRXXLCGTLDYLPP 178
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 127
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 128 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRXXLCGTLDYLPP 175
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 127
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 128 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTXLCGTLDYLPP 175
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 129
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I +FG + H P L GT Y
Sbjct: 130 RVIHRDIKPENLLLG---SAGELKIANFGWS---------VHAPSSRRTTLCGTLDYLPP 177
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L G ++L K + ++ N + + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATYITELANALSYCHSK 132
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 133 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 180
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q +A+K+ K + + E +L + ++ + + PN
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 124
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 125 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 172
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 130
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I +FG + H P L GT Y
Sbjct: 131 RVIHRDIKPENLLLG---SAGELKIANFGWS---------VHAPSSRRTTLCGTLDYLPP 178
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGT---NIQTNEEVAIKLNVKTKHP-QLQYEAKLYKIL 58
P++ N F++ KIG G+F +YL T + E++A+K + T HP ++ E + +
Sbjct: 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA 76
Query: 59 QGGTGIPNLRWFGVEGDYNVLVIDLLG-PSLEDLFNFCSRKLSLKTVLMLADQMINRVEF 117
G + +++ + D+ V+ + L S D+ N LS + V + ++
Sbjct: 77 GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKR 132
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+H +HRD+KP NFL RR + ++DFGLA+ DT
Sbjct: 133 IHQFGIVHRDVKPSNFLY--NRRLKKYALVDFGLAQGTHDT 171
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ K + + E +L + ++ + + PN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L G ++L K + ++ N + + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATYITELANALSYCHSK 132
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 133 RVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRXXLXGTLDYLPP 180
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL + +A+K+ K + + E +L + ++ + + PN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L K + ++ N + + HSK
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 127
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G A ++ I DFG + H P L GT Y
Sbjct: 128 KVIHRDIKPENLLLG---SAGELKIADFGWS---------VHAPSSRRAALCGTLDYLPP 175
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ KT+ + E +L + ++ + + PN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L SR +T + ++ N + + HSK
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SRFDEQRTATYIT-ELANALSYCHSK 131
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G ++ I DFG + H P L GT Y
Sbjct: 132 RVIHRDIKPENLLLG---SNGELKIADFGWS---------VHAPSSRRDTLCGTLDYLPP 179
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--PN 66
F +GR +G G FG +YL Q+ +A+K+ KT+ + E +L + ++ + + PN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 67 -LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
LR +G D Y +L LG +L SR +T + + + N + + HSK
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SRFDEQRTATYITE-LANALSYCHSK 131
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N L+G ++ I DFG + H P L GT Y
Sbjct: 132 RVIHRDIKPENLLLG---SNGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPP 179
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + DL SLG + FL G P++
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA 212
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKHPQLQ-YEAKLYKILQ- 59
+ ++++ K+G G +YL + N +VAIK + + K L+ +E +++ Q
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 118
I ++ E D LV++ + GP+L + LS+ T + +Q+++ ++
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE-SHGPLSVDTAINFTNQILDGIKHA 127
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
H +HRDIKP N L+ + + I DFG+AK +T+ Q ++ GT +Y
Sbjct: 128 HDMRIVHRDIKPQNILIDSNK---TLKIFDFGIAKALSETSLTQ------TNHVLGTVQY 178
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 217
S G D+ S+G VL L G P+ G A
Sbjct: 179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA 217
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++ LG +G G E++L +++ + +VA+K+ + + + Q +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 65 PNLRWFGV---------EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLAD--QMI 112
+ V G +V++ + G +L D+ + + + ++AD Q +
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 113 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNL 172
N F H +HRD+KP N L+ N V ++DFG+A+ D+ + +
Sbjct: 130 N---FSHQNGIIHRDVKPANILISA---TNAVKVVDFGIARAIADSGNS----VXQTAAV 179
Query: 173 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S G R D+ SLG VL L G P+ G
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 26/280 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 25 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K +K ++ +A Q ++++H+KS
Sbjct: 82 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLA-KRYRDTATHQHIPYRENKNLTGTARYAS-- 180
+HRD+K +N + N V I DFGLA ++ R + +HQ + L+G+ + +
Sbjct: 142 IHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQF------EQLSGSILWMAPE 192
Query: 181 -MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 239
+ S + D+ + G VL + G LP+ + +S + +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIEMVGRGSLSPDLSKV 250
Query: 240 CRGYPTEFASYFHYCRSLRFDDKPDY----AYLKRLFRDL 275
P C + D++P + A ++ L R+L
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 290
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 123/280 (43%), Gaps = 26/280 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 13 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 69
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K +K ++ +A Q ++++H+KS
Sbjct: 70 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK-RYRDTATHQHIPYRENKNLTGTARYAS-- 180
+HRD+K +N + N V I DFGLA + R + +HQ + L+G+ + +
Sbjct: 130 IHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQF------EQLSGSILWMAPE 180
Query: 181 -MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEAL 239
+ S + D+ + G VL + G LP+ + +S + +
Sbjct: 181 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIEMVGRGSLSPDLSKV 238
Query: 240 CRGYPTEFASYFHYCRSLRFDDKPDY----AYLKRLFRDL 275
P C + D++P + A ++ L R+L
Sbjct: 239 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 278
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL------NVKTKHPQLQYEAKLYKILQG 60
++++ R +G GSFGE+ L + T +E A+K+ KT L E +L K L
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVH 119
+ +F +G + ++ G L D SRK S + Q+++ + ++H
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGITYMH 166
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+HRD+KP+N L+ + + IIDFGL+ + + ++ K+ GTA Y
Sbjct: 167 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--------KKMKDKIGTAYYI 218
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ G + D+ S G +L L G P+ G
Sbjct: 219 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 25 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K +K ++ +A Q ++++H+KS
Sbjct: 82 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLA-KRYRDTATHQHIPYRENKNLTGTARYAS-- 180
+HRD+K +N + N V I DFGLA ++ R + +HQ + L+G+ + +
Sbjct: 142 IHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQF------EQLSGSILWMAPE 192
Query: 181 -MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 215
+ S + D+ + G VL + G LP+ +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL------NVKTKHPQLQYEAKLYKILQG 60
++++ R +G GSFGE+ L + T +E A+K+ KT L E +L K L
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVH 119
+ +F +G + ++ G L D SRK S + Q+++ + ++H
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGITYMH 167
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+HRD+KP+N L+ + + IIDFGL+ + + ++ K+ GTA Y
Sbjct: 168 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--------KKMKDKIGTAYYI 219
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ G + D+ S G +L L G P+ G
Sbjct: 220 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL------NVKTKHPQLQYEAKLYKILQG 60
++++ R +G GSFGE+ L + T +E A+K+ KT L E +L K L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVH 119
+ +F +G + ++ G L D SRK S + Q+++ + ++H
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGITYMH 143
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+HRD+KP+N L+ + + IIDFGL+ + + ++ K+ GTA Y
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--------KKMKDKIGTAYYI 195
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ G + D+ S G +L L G P+ G
Sbjct: 196 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL------NVKTKHPQLQYEAKLYKILQG 60
++++ R +G GSFGE+ L + T +E A+K+ KT L E +L K L
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVH 119
+ +F +G + ++ G L D SRK S + Q+++ + ++H
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGITYMH 149
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+HRD+KP+N L+ + + IIDFGL+ + + ++ K+ GTA Y
Sbjct: 150 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--------KKMKDKIGTAYYI 201
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ G + D+ S G +L L G P+ G
Sbjct: 202 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL------NVKTKHPQLQYEAKLYKILQG 60
++++ R +G GSFGE+ L + T +E A+K+ KT L E +L K L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 61 GTGIPNLRWFGVEGDYNVLVIDL-LGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFV 118
I L F + Y LV ++ G L D SRK S + Q+++ + +
Sbjct: 86 -PNIXKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGITYX 142
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
H +HRD+KP+N L+ + + IIDFGL+ + + ++ K+ GTA Y
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--------KKXKDKIGTAYY 194
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ G + D+ S G +L L G P+ G
Sbjct: 195 IAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++ LG +G G E++L +++ + +VA+K+ + + + Q +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 65 PNLRWFGV---------EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ V G +V++ + G +L D+ + + + ++AD
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA-CQA 128
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG 174
+ F H +HRD+KP N ++ N V ++DFG+A+ D+ + + G
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNS----VTQTAAVIG 181
Query: 175 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
TA+Y S G R D+ SLG VL L G P+ G
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++ LG +G G E++L +++ + +VA+K+ + + + Q +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 65 PNLRWFGV---------EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ V G +V++ + G +L D+ + + + ++AD
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA-CQA 128
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG 174
+ F H +HRD+KP N ++ N V ++DFG+A+ D+ + + G
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNS----VTQTAAVIG 181
Query: 175 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
TA+Y S G R D+ SLG VL L G P+ G
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++ LG +G G E++L +++ + +VA+K+ + + + Q +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 65 PNLRWFGV---------EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ V G +V++ + G +L D+ + + + ++AD
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA-CQA 128
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG 174
+ F H +HRD+KP N ++ N V ++DFG+A+ D+ + + G
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNS----VTQTAAVIG 181
Query: 175 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
TA+Y S G R D+ SLG VL L G P+ G
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++ LG +G G E++L +++ + +VA+K+ + + + Q +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 65 PNLRWFGV---------EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ V G +V++ + G +L D+ + + + ++AD
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA-CQA 128
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG 174
+ F H +HRD+KP N ++ N V ++DFG+A+ D+ + + G
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNS----VTQTAAVIG 181
Query: 175 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
TA+Y S G R D+ SLG VL L G P+ G
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++ LG +G G E++L +++ + +VA+K+ + + + Q +
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 86
Query: 65 PNLRWFGV---------EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ V G +V++ + G +L D+ + + + ++AD
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA-CQA 145
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG 174
+ F H +HRD+KP N ++ N V ++DFG+A+ D+ + + G
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISA---TNAVKVMDFGIARAIADSGNS----VTQTAAVIG 198
Query: 175 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
TA+Y S G R D+ SLG VL L G P+ G
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ + P ++DLF+F + + +L+ L Q++
Sbjct: 68 VSSGFSGVIRLLDWFE-RPDSFVLILERMEP-VQDLFDFITERGALQEELARSFFWQVLE 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 169
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQL--QYEAKLY 55
+++ + + +GSG+ GE+ L +T ++VAIK+ K K P L + E ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 115
K L I +F E Y VL + G + + +++L T + QM+ V
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAV 127
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+++H +HRD+KP+N L+ + I DFG +K +T+ + L GT
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM--------RTLCGT 179
Query: 176 ARYASMNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPW 212
Y + + + + R D SLG +L L G P+
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQL--QYEAKLY 55
+++ + + +GSG+ GE+ L +T ++VAIK+ K K P L + E ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 115
K L I +F E Y VL + G + + +++L T + QM+ V
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAV 127
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+++H +HRD+KP+N L+ + I DFG +K +T+ + L GT
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM--------RTLCGT 179
Query: 176 ARYASMNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPW 212
Y + + + + R D SLG +L L G P+
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQL--QYEAKLY 55
+++ + + +GSG+ GE+ L +T ++VAIK+ K K P L + E ++
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 115
K L I +F E Y VL + G + + +++L T + QM+ V
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAV 126
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+++H +HRD+KP+N L+ + I DFG +K +T+ + L GT
Sbjct: 127 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM--------RTLCGT 178
Query: 176 ARYASMNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPW 212
Y + + + + R D SLG +L L G P+
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQL--QYEAKLY 55
+++ + + +GSG+ GE+ L +T ++VAIK+ K K P L + E ++
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 115
K L I +F E Y VL + G + + +++L T + QM+ V
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAV 133
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+++H +HRD+KP+N L+ + I DFG +K +T+ + L GT
Sbjct: 134 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM--------RTLCGT 185
Query: 176 ARYASMNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPW 212
Y + + + + R D SLG +L L G P+
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQL--QYEAKLY 55
+++ + + +GSG+ GE+ L +T ++VAIK+ K K P L + E ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 115
K L I +F E Y VL + G + + +++L T + QM+ V
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAV 127
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+++H +HRD+KP+N L+ + I DFG +K +T+ + L GT
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM--------RTLCGT 179
Query: 176 ARYASMNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPW 212
Y + + + + R D SLG +L L G P+
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH---------PQL--QYEAKLY 55
+++ + + +GSG+ GE+ L +T ++VAI++ K K P L + E ++
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 115
K L I +F E Y VL + G + + +++L T + QM+ V
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAV 252
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+++H +HRD+KP+N L+ + I DFG +K +T+ + L GT
Sbjct: 253 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM--------RTLCGT 304
Query: 176 ARYASMNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPW 212
Y + + + + R D SLG +L L G P+
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNL 67
+K+GSG++GE+ L + T+ E AIK+ KT + +L E + K+L +
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 68 RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTV--LMLADQMINRVEFVHSKSFLH 125
+F + +Y +++ G +LF+ ++ V ++ Q+++ V ++H + +H
Sbjct: 103 DFFEDKRNYYLVMECYKGG---ELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVH 159
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+KP+N L+ + + I+DFGL+ + + ++ K GTA Y + L
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--------KKMKERLGTAYYIAPEV-L 210
Query: 186 GIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ + D+ S+G +L L G P+ G
Sbjct: 211 RKKYDEKCDVWSIGVILFILLAGYPPFGG 239
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 25/222 (11%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-HP----QLQYEAKLYK 56
+P +GN +RL + IG G+F ++ L ++ T EVA+K+ KT+ +P +L E ++ K
Sbjct: 11 QPHIGN-YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 57 ILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--QMIN 113
IL PN+ + F V L + + S ++F++ +K A Q+++
Sbjct: 70 ILNH----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V++ H K +HRD+K +N L+ + I DFG + + T ++
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLD---GDMNIKIADFGFSNEF--TVGNKL------DTFC 174
Query: 174 GTARYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-HP----QLQYEAKLYK 56
+P +GN +RL + IG G+F ++ L +I T EVAIK+ KT+ +P +L E ++ K
Sbjct: 8 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 66
Query: 57 ILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMIN 113
IL PN+ + F V L + + S ++F++ ++ K Q+++
Sbjct: 67 ILNH----PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 122
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V++ H K +HRD+K +N L+ + I DFG + +
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDADM---NIKIADFGFSNEFTVGGKLD--------TFC 171
Query: 174 GTARYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH---------PQL--QYEAKLY 55
+++ + + +GSG+ GE+ L +T ++VAI++ K K P L + E ++
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 115
K L I +F E Y VL + G + + +++L T + QM+ V
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAV 266
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+++H +HRD+KP+N L+ + I DFG +K +T+ + L GT
Sbjct: 267 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM--------RTLCGT 318
Query: 176 ARYASMNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPW 212
Y + + + + R D SLG +L L G P+
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 83 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 140
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 184
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 84 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 141
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 185
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 83 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 140
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 184
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 84 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 141
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 185
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 97 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 154
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 198
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLA--DQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L + Q++
Sbjct: 96 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 153
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 197
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLA--DQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L + Q++
Sbjct: 97 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 154
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 198
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLA--DQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L + Q++
Sbjct: 96 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 153
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 197
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLA--DQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L + Q++
Sbjct: 97 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 154
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 198
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLA--DQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L + Q++
Sbjct: 103 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 160
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 204
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 69 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 126
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 170
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 84 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 141
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 185
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 69 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 126
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 170
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLA--DQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L + Q++
Sbjct: 116 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 173
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 217
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 97 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 154
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 198
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 96 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 153
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 197
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 68 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 169
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 69 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 126
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 170
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 111 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 168
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 212
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 111 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 168
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 212
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 96 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 153
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 197
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-HP----QLQYEAKLYK 56
+P +GN +RL + IG G+F ++ L +I T EVAIK+ KT+ +P +L E ++ K
Sbjct: 11 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 57 ILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMIN 113
IL PN+ + F V L + + S ++F++ ++ K Q+++
Sbjct: 70 ILNH----PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V++ H K +HRD+K +N L+ + I DFG + +
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADM---NIKIADFGFSNEFTVGGKLD--------AFC 174
Query: 174 GTARYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
G YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 64 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 121
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 165
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 64 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 121
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 165
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 67 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 124
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 168
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 91 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 148
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 192
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKI 57
+++++G +GSG FG +Y G + N VAIK K + ++ E L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 58 LQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
+ G I L WF D VL+++ P ++DLF+F + + +L+ L Q++
Sbjct: 64 VSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLE 121
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 165
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYK 56
+P +GN +RL + IG G+F ++ L +I T +EVA+K+ KT+ +L E ++ K
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 57 ILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--QMIN 113
+L PN+ + F V L + + S ++F++ +K A Q+++
Sbjct: 69 VLNH----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR-----DTATHQHIPYRE 168
V++ H K +HRD+K +N L+ + I DFG + + DT
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEFTFGNKLDT---------- 171
Query: 169 NKNLTGTARYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 172 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYK 56
+P +GN +RL + IG G+F ++ L +I T +EVA+K+ KT+ +L E ++ K
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 57 ILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--QMIN 113
+L PN+ + F V L + + S ++F++ +K A Q+++
Sbjct: 69 VLNH----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR-----DTATHQHIPYRE 168
V++ H K +HRD+K +N L+ + I DFG + + DT
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEFTFGNKLDT---------- 171
Query: 169 NKNLTGTARYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 172 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 37 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLA-KRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA ++ R + +HQ + L+G+ + +
Sbjct: 154 IHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQF------EQLSGSILWMAPE 204
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 25/222 (11%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYK 56
+P +GN +RL + IG G+F ++ L +I T +EVA+K+ KT+ +L E ++ K
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 57 ILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--QMIN 113
+L PN+ + F V L + + S ++F++ +K A Q+++
Sbjct: 69 VLNH----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V++ H K +HRD+K +N L+ + I DFG + + T ++ +
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEF--TFGNKLDAF------C 173
Query: 174 GTARYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
G YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 29 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 85
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 86 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLA-KRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA ++ R + +HQ + L+G+ + +
Sbjct: 146 IHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQF------EQLSGSILWMAPE 196
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 197 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYK 56
+P +GN +RL + IG G+F ++ L +I T +EVA+++ KT+ +L E ++ K
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 57 ILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--QMIN 113
+L PN+ + F V L + + S ++F++ +K A Q+++
Sbjct: 69 VLNH----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR-----DTATHQHIPYRE 168
V++ H K +HRD+K +N L+ + I DFG + + DT
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEFTFGNKLDT---------- 171
Query: 169 NKNLTGTARYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 172 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 9 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLA-KRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA ++ R + +HQ + L+G+ + +
Sbjct: 126 IHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQF------EQLSGSILWMAPE 176
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYK 56
+P +GN +RL + IG G+F ++ L +I T +EVA+++ KT+ +L E ++ K
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 57 ILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--QMIN 113
+L PN+ + F V L + + S ++F++ +K A Q+++
Sbjct: 69 VLNH----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V++ H K +HRD+K +N L+ + I DFG + + +
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEFTFG--------NKLDEFC 173
Query: 174 GTARYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 37 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK-RYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA + R + +HQ + L+G+ + +
Sbjct: 154 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQF------EQLSGSILWMAPE 204
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 36 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 92
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 93 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK-RYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA + R + +HQ + L+G+ + +
Sbjct: 153 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQF------EQLSGSILWMAPE 203
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 204 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 14 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK-RYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA + R + +HQ + L+G+ + +
Sbjct: 131 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQF------EQLSGSILWMAPE 181
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 11 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 67
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 68 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK-RYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA + R + +HQ + L+G+ + +
Sbjct: 128 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQF------EQLSGSILWMAPE 178
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 179 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 14 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK-RYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA + R + +HQ + L+G+ + +
Sbjct: 131 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQF------EQLSGSILWMAPE 181
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 39/221 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGTGI 64
+ L IG+G F ++ L +I T E VAIK+ K + P+++ E + +
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE---------AL 62
Query: 65 PNLRWFGVEGDYNVL-VIDLLGPSLE-----DLFNFC--SRKLSLKTVLMLADQMINRVE 116
NLR + Y+VL + + LE +LF++ +LS + ++ Q+++ V
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA 122
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
+VHS+ + HRD+KP+N L +++ +IDFGL + + + H+ + G+
Sbjct: 123 YVHSQGYAHRDLKPENLLFD---EYHKLKLIDFGLCAKPKGNKDY-HL-----QTCCGSL 173
Query: 177 RYASM-----NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
YA+ ++LG E D+ S+G +L + G LP+
Sbjct: 174 AYAAPELIQGKSYLGSEA----DVWSMGILLYVLMCGFLPF 210
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQY------EAKLYKILQG 60
+++R K+G G++GE+Y + TNE VAIK ++ +H + E L K LQ
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIK-RIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFV 118
N+ +N + + + DL + + +S++ + Q+IN V F
Sbjct: 93 R----NIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTA---THQHIP--YRENKN 171
HS+ LHRD+KP N L+ + + + I DFGLA+ + TH+ I YR +
Sbjct: 149 HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEI 208
Query: 172 LTGTARYAS 180
L G+ Y++
Sbjct: 209 LLGSRHYST 217
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 9 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK-RYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA + R + +HQ + L+G+ + +
Sbjct: 126 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQF------EQLSGSILWMAPE 176
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ F +GR +G G FG +YL Q +A+K+ K++ + E +L + ++ + +
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 65 PN-LRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSK 121
PN LR + D + + L +L+ + + + +++ + + + H +
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N LMG ++ I DFG + H P + + GT Y
Sbjct: 135 KVIHRDIKPENLLMGY---KGELKIADFGWS---------VHAPSLRRRXMCGTLDYLPP 182
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
G + DL G + FL G P+
Sbjct: 183 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ F +GR +G G FG +YL Q +A+K+ K++ + E +L + ++ + +
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 65 PN-LRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSK 121
PN LR + D + + L +L+ + + + +++ + + + H +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N LMG ++ I DFG + H P + + GT Y
Sbjct: 134 KVIHRDIKPENLLMGY---KGELKIADFGWS---------VHAPSLRRRXMCGTLDYLPP 181
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
G + DL G + FL G P+
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIP 65
+ +G++IGSGSFG +Y G + + +VA+K LNV PQ LQ +L+ +
Sbjct: 9 QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 66 NLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L + G + ++ G SL + K + ++ +A Q ++++H+KS
Sbjct: 66 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK-RYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+K +N + V I DFGLA + R + +HQ + L+G+ + +
Sbjct: 126 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQF------EQLSGSILWMAPE 176
Query: 183 THLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGL 215
++ S + D+ + G VL + G LP+ +
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKILQGGT 62
F++G +G GSF +Y +I T EVAIK+ K ++Q E K++ L+ +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 63 GIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
+ +F + +Y LV+++ + + S Q+I + ++HS
Sbjct: 73 ILELYNYFE-DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
LHRD+ N L+ R + I DFGLA + + +P+ ++ L GT Y S
Sbjct: 132 GILHRDLTLSNLLL---TRNMNIKIADFGLATQLK-------MPHEKHYTLCGTPNYISP 181
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
D+ SLG + L G P+
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 94 FVKLYFTFQDDEKL----YFGLSYAKNGCLLKYIR-KIGSFDETCTR--------FYTAE 140
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 192
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GTA+Y S S+ DL +LG ++ + G P++
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYK 56
+P +GN +RL + IG G+F ++ L +I T +EVA+K+ KT+ +L E ++ K
Sbjct: 10 QPHIGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXK 68
Query: 57 ILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--QMIN 113
+L PN+ + F V L + S ++F++ K A Q+++
Sbjct: 69 VLNH----PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS 124
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V++ H K +HRD+K +N L+ + I DFG + + T ++ +
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDAD---XNIKIADFGFSNEF--TFGNKLDAF------C 173
Query: 174 GTARYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
G YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 38/235 (16%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----------------NVKTKH 45
E ++G + RK+GSG++GE+ L + E AIK+ N++ H
Sbjct: 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH 90
Query: 46 PQLQYEAKLYKILQGGTGIPNL-RWFGVEGD--YNVLVIDLL--GPSLEDLFNFCSRKLS 100
++ E L K L PN+ + F V D Y LV + G E + N K
Sbjct: 91 EEIYNEISLLKSLDH----PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFD 144
Query: 101 LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY-RDTA 159
+ Q+++ + ++H + +HRDIKP+N L+ + I+DFGL+ + +D
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GTA Y + L + + + D+ S G ++ L G P+ G
Sbjct: 205 LRDRL---------GTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGG 249
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKIL 58
+ ++++ +K+GSG++GE+ L + T E AIK+ K+ L E + K L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 59 QGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 118
+ +F + +Y +++ G L D +K S ++ Q+++ ++
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVIMKQVLSGTTYL 137
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
H + +HRD+KP+N L+ R + I+DFGL+ + + K GTA Y
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG--------KMKERLGTAYY 189
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ L + + D+ S G +L L G P+ G
Sbjct: 190 IAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGG 224
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 118/291 (40%), Gaps = 46/291 (15%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 24 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 80
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 81 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 139
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 140 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEXTA----REGAKFPIKWTAPEAIN 192
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 193 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 233
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQF 283
RGY P E C R +D+P + YL+ + D F QF
Sbjct: 234 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQF 284
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQ 59
+GN +RL + IG G+F ++ L +I T +EVA+K+ KT+ +L E ++ K+L
Sbjct: 6 IGN-YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 60 GGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--QMINRVE 116
PN+ + F V L + + S ++F++ +K A Q+++ V+
Sbjct: 65 H----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ 120
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
+ H K +HRD+K +N L+ + I DFG + + + G+
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEFTFG--------NKLDTFCGSP 169
Query: 177 RYASMNTHLGIEQSRRD-DLESLGYVLMYFLRGSLPWQG 214
YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 40/281 (14%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L +++G+G FGE+++GT N +VAIK L T P+ EA++ K L+ +
Sbjct: 11 LQLIKRLGNGQFGEVWMGT-WNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL 69
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHR 126
E Y V G L+ L + R L L ++ +A Q+ + ++ +++HR
Sbjct: 70 YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 129
Query: 127 DIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASMNTH 184
D++ N L+G G I DFGLA+ D R+ + TA A++
Sbjct: 130 DLRSANILVGNGLICK---IADFGLARLIEDNEXTA----RQGAKFPIKWTAPEAALYGR 182
Query: 185 LGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
I + D+ S G +L + +G +P+ G+ +E + RGY
Sbjct: 183 FTI----KSDVWSFGILLTELVTKGRVPYPGMNN---------------REVLEQVERGY 223
Query: 244 --------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P +C +++P + YL+ D F
Sbjct: 224 RMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYF 264
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 95 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 141
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 193
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GTA+Y S + DL +LG ++ + G P++
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 23 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 79
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 80 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 138
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 139 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEXTA----REGAKFPIKWTAPEAIN 191
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 192 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 232
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 233 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 276
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 21 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 77
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 78 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 137 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEXTA----REGAKFPIKWTAPEAIN 189
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 190 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 230
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 231 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 274
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV 72
+ +G GSF + ++N+ A+K+ K Q E K+ +G I L
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 73 EGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
+ + LV++LL +LF +K S + ++++ V +H +HRD+KP
Sbjct: 77 DQLHTFLVMELLNGG--ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 131 DNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS--MNTHLGIE 188
+N L ++ IIDFG A+ P T YA+ + G +
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP-------CFTLHYAAPELLNQNGYD 187
Query: 189 QSRRDDLESLGYVLMYFLRGSLPWQ 213
+S DL SLG +L L G +P+Q
Sbjct: 188 ESC--DLWSLGVILYTMLSGQVPFQ 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 99 FVKLYFCFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 145
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 146 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 197
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKIL 58
+ ++++ +K+GSG++GE+ L + T E AIK+ K+ L E + K L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 59 QGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 118
+ +F + +Y +++ G L D +K S ++ Q+++ ++
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
H + +HRD+KP+N L+ R + I+DFGL+ + + K GTA Y
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG--------KMKERLGTAYY 172
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ L + + D+ S G +L L G P+ G
Sbjct: 173 IAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGG 207
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ F + R +G G FG +YL Q +A+K+ K++ + E +L + ++ + +
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 65 PN-LRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSK 121
PN LR + D + + L +L+ + + + +++ + + + H +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+HRDIKP+N LMG ++ I DFG + H P + + GT Y
Sbjct: 134 KVIHRDIKPENLLMGY---KGELKIADFGWS---------VHAPSLRRRXMCGTLDYLPP 181
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
G + DL G + FL G P+
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 72 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 118
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 119 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 170
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 71 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 117
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 118 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 169
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 117/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 77
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V+ G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 78 LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 138 RDLRAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 188
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 233
Query: 244 ---PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 95 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 141
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 193
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 69 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 115
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 116 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 167
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 94 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 140
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 192
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 97 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 143
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 144 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 195
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 17 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 73
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 74 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 132
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 133 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEXTA----REGAKFPIKWTAPEAIN 185
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 186 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 226
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 227 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 270
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 94 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 140
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 192
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 92 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 138
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RANA 191
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 192 -FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 94 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 140
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 192
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 40/281 (14%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 77
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V+ G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 78 LYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 126 RDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTH 184
RD++ N L+G N V + DFGLA+ D Y + ++ +
Sbjct: 138 RDLRAANILVG----ENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAA 187
Query: 185 LGIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
L + + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGY 232
Query: 244 ----PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + IG+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P D+F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPG-GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 15 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 71
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 72 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 131 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEXTA----REGAKFPIKWTAPEAIN 183
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 184 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 224
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + IG+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P D+F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPG-GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 94 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 140
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 192
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 92 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 138
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 190
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 92 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 138
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 190
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 25 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 81
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 82 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 140
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 141 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAIN 193
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 194 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 234
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 235 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 278
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 91 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 137
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 189
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GTA+Y S + DL +LG ++ + G P++
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 70 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 116
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 117 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 168
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 15 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 71
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 72 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 131 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEXTA----REGAKFPIKWTAPEAIN 183
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 184 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 224
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 94 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 140
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 192
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 16 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 72
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 73 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 131
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 132 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEXTA----REGAKFPIKWTAPEAIN 184
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 185 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 225
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 226 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 269
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 68 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 125 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 176
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 21/215 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKIL--QGGTGI 64
+ F +GR +G G FG +YL +++ VA+K+ K++ + E +L + + Q
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 65 PN-LRWFGVEGD----YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
PN LR + D Y +L G ++L C+ +M +++ + + + H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIM--EELADALMYCH 140
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
K +HRDIKP+N L+G ++ I DFG + H P K + GT Y
Sbjct: 141 GKKVIHRDIKPENLLLG---LKGELKIADFGWS---------VHAPSLRRKTMCGTLDYL 188
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
G + + DL +G + L G+ P++
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYE------------AKLY 55
++RLG +G G FG ++ G + +VAIK+ + + L + A L+
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNR--VLGWSPLSDSVTCPLEVALLW 89
Query: 56 KILQGGTGIPN----LRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLAD 109
K+ GG G P L WF + + +LV++ P+ +DLF++ + K L
Sbjct: 90 KVGAGG-GHPGVIRLLDWFETQEGF-MLVLERPLPA-QDLFDYITEKGPLGEGPSRCFFG 146
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 150
Q++ ++ HS+ +HRDIK +N L+ L R + +IDFG
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAK--LIDFG 185
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 78 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 137
VLV + L L+ L + C L T Q++N + + H + LHRD+KP N L+
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134
Query: 138 GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLE 196
R ++ I DFGLA+ + IP R+ + T Y + + +G ++ S D+
Sbjct: 135 --REGELKIADFGLARAF-------GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 197 SLGYVLMYFLRGSLPWQGL 215
S+G + + G+ + G+
Sbjct: 186 SVGCIFAEMVNGTPLFPGV 204
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 76 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 122
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 123 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 174
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 78 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 137
VLV + L L+ L + C L T Q++N + + H + LHRD+KP N L+
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134
Query: 138 GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLE 196
R ++ I DFGLA+ + IP R+ + T Y + + +G ++ S D+
Sbjct: 135 --REGELKIADFGLARAF-------GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 197 SLGYVLMYFLRGSLPWQGL 215
S+G + + G+ + G+
Sbjct: 186 SVGCIFAEMVNGAPLFPGV 204
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 40/281 (14%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 77
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 78 LYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 126 RDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTH 184
RD++ N L+G N V + DFGLA+ D Y + ++ +
Sbjct: 138 RDLRAANILVG----ENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAA 187
Query: 185 LGIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
L + + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGY 232
Query: 244 ----PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQL-QYEAKL-YKILQGGTGI 64
++F R +G+GSFG + L + +T A+K+ K K +L Q E L K +Q
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 65 PNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHS 120
P L F + + N+ ++ P E +F+ R + S A Q++ E++HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
++RD+KP+N L+ + + + DFG AKR + L GT Y +
Sbjct: 161 LDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTW----------XLCGTPEYLA 207
Query: 181 MNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
L ++ D +LG VL+Y + P
Sbjct: 208 PEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 21 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 77
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 78 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 137 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAIN 189
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 190 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 230
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 231 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 274
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 20 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 76
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 77 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 135
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 136 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAIN 188
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 189 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 229
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 230 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 273
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 121/283 (42%), Gaps = 44/283 (15%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 77
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V+ G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 78 LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 126 RDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASMN 182
RD++ N L+G N V + DFGLA+ D R+ + TA A++
Sbjct: 138 RDLRAANILVG----ENLVCKVADFGLARLIEDNEXTA----RQGAKFPIKWTAPEAALY 189
Query: 183 THLGIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 241
I + D+ S G +L +G +P+ G+ V +E R
Sbjct: 190 GRFTI----KSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---R 230
Query: 242 GY----PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
GY P E H C+ R D ++P + YL+ D F
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 78 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 137
VLV + L L+ L + C L T Q++N + + H + LHRD+KP N L+
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134
Query: 138 GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLE 196
R ++ I DFGLA+ + IP R+ + T Y + + +G ++ S D+
Sbjct: 135 --REGELKIADFGLARAF-------GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 197 SLGYVLMYFLRGSLPWQGL 215
S+G + + G+ + G+
Sbjct: 186 SVGCIFAEMVNGTPLFPGV 204
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF + L + T+ E AIK+ K K P + E
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 91 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 137
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 138 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 189
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN- 66
K+ KIG G+ G +Y ++ T +EVAI+ + P+ + +++ PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-PNI 79
Query: 67 ---LRWFGVEGDYNVLVIDLLGPSLEDLFN-FCSRKLSLKTVLMLADQMINRVEFVHSKS 122
L + V + V++ L G SL D+ C + + V + + +EF+HS
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 136
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN-LTGTARYASM 181
+HRDIK DN L+G+ V + DFG Q P + ++ + GT + +
Sbjct: 137 VIHRDIKSDNILLGMD---GSVKLTDFGFCA--------QITPEQSKRSEMVGTPYWMAP 185
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ D+ SLG + + + G P+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 40/281 (14%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 269 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 326
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 327 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 126 RDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTH 184
RD++ N L+G N V + DFGLA+ D Y + ++ +
Sbjct: 387 RDLRAANILVG----ENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAA 436
Query: 185 LGIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
L + + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGY 481
Query: 244 ----PTEFASYFH--YCRSLRF--DDKPDYAYLKRLFRDLF 276
P E H C+ R +++P + YL+ D F
Sbjct: 482 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 15 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 71
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 72 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 131 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAIN 183
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 184 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 224
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN- 66
K+ KIG G+ G +Y ++ T +EVAI+ + P+ + +++ PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-PNI 79
Query: 67 ---LRWFGVEGDYNVLVIDLLGPSLEDLFN-FCSRKLSLKTVLMLADQMINRVEFVHSKS 122
L + V + V++ L G SL D+ C + + V + + +EF+HS
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 136
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN-LTGTARYASM 181
+HRDIK DN L+G+ V + DFG Q P + ++ + GT + +
Sbjct: 137 VIHRDIKSDNILLGMD---GSVKLTDFGFCA--------QITPEQSKRSTMVGTPYWMAP 185
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ D+ SLG + + + G P+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 68 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 125 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 176
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 68 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 125 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 176
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 68 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 125 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 176
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 61/241 (25%)
Query: 5 VGNKFRLGRKIGSGSF-----------GEIYLGTNIQ-----------TNEEVAIKLNV- 41
V + + +G ++GSG F G+ Y I+ + EE+ ++N+
Sbjct: 10 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 69
Query: 42 -KTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLS 100
+ +HP + L+ I + T + VL+++L+ +LF+F + K S
Sbjct: 70 REIRHPNI---ITLHDIFENKTDV-------------VLILELVSGG--ELFDFLAEKES 111
Query: 101 LKT--VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRD 157
L Q+++ V ++HSK H D+KP+N ++ N ++ +IDFG+A
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----- 166
Query: 158 TATHQHIPYRENKNLTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
H+ E KN+ GT + + LG+E D+ S+G + L G+ P+
Sbjct: 167 ---HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFL 219
Query: 214 G 214
G
Sbjct: 220 G 220
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + IG+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 61/241 (25%)
Query: 5 VGNKFRLGRKIGSGSF-----------GEIYLGTNIQ-----------TNEEVAIKLNV- 41
V + + +G ++GSG F G+ Y I+ + EE+ ++N+
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 42 -KTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLS 100
+ +HP + L+ I + T + VL+++L+ +LF+F + K S
Sbjct: 63 REIRHPNI---ITLHDIFENKTDV-------------VLILELVSGG--ELFDFLAEKES 104
Query: 101 L--KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRD 157
L Q+++ V ++HSK H D+KP+N ++ N ++ +IDFG+A
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----- 159
Query: 158 TATHQHIPYRENKNLTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
H+ E KN+ GT + + LG+E D+ S+G + L G+ P+
Sbjct: 160 ---HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFL 212
Query: 214 G 214
G
Sbjct: 213 G 213
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 77
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 138 RDLRAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 188
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 233
Query: 244 ---PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 66 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 123 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 174
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 40/281 (14%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 77
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 126 RDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTH 184
RD++ N L+G N V + DFGLA+ D Y + ++ +
Sbjct: 138 RDLRAANILVG----ENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAA 187
Query: 185 LGIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
L + + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGY 232
Query: 244 ----PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 233 RMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQG 60
++++L ++G G+F + I T +E A K+ + TK H +L+ EA++ ++L+
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI-INTKKLSARDHQKLEREARICRLLKH 62
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 118
I L E ++ LV DL+ G ED+ S Q++ V
Sbjct: 63 -PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AREYYSEADASHCIQQILESVNHC 119
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152
H +HRD+KP+N L+ + V + DFGLA
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN- 66
K+ KIG G+ G +Y ++ T +EVAI+ + P+ + +++ PN
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-PNI 79
Query: 67 ---LRWFGVEGDYNVLVIDLLGPSLEDLFN-FCSRKLSLKTVLMLADQMINRVEFVHSKS 122
L + V + V++ L G SL D+ C + + V + + +EF+HS
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 136
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN-LTGTARYASM 181
+HRDIK DN L+G+ V + DFG Q P + ++ + GT + +
Sbjct: 137 VIHRDIKSDNILLGMD---GSVKLTDFGFCA--------QITPEQSKRSXMVGTPYWMAP 185
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ D+ SLG + + + G P+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 25/217 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ F + R IG GSFG++ + T + A+K K K + ++K LQ G+
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 65 PNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLK--TVLMLADQMINRVEFVH 119
P L W+ + + ++ +V+DLL DL + + K TV + +++ ++++
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGG--DLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY-RDTATHQHIPYRENKNLTGTARY 178
++ +HRD+KPDN L+ V+I DF +A R+T + GT Y
Sbjct: 133 NQRIIHRDMKPDNILLD---EHGHVHITDFNIAAMLPRETQI---------TTMAGTKPY 180
Query: 179 AS---MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ ++ G S D SLG LRG P+
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNLR--WFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N ++ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW----------XLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 40/281 (14%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 9 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 66
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 67 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 126 RDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTH 184
RD++ N L+G N V + DFGLA+ D Y + ++ +
Sbjct: 127 RDLRAANILVG----ENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAA 176
Query: 185 LGIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
L + + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGY 221
Query: 244 ----PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 222 RMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 10 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 66
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 67 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 126 IHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAIN 178
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 179 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 219
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 220 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 263
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 61/241 (25%)
Query: 5 VGNKFRLGRKIGSGSF-----------GEIYLGTNIQ-----------TNEEVAIKLNV- 41
V + + +G ++GSG F G+ Y I+ + EE+ ++N+
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 42 -KTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLS 100
+ +HP + L+ I + T + VL+++L+ +LF+F + K S
Sbjct: 84 REIRHPNI---ITLHDIFENKTDV-------------VLILELVSGG--ELFDFLAEKES 125
Query: 101 L--KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRD 157
L Q+++ V ++HSK H D+KP+N ++ N ++ +IDFG+A
Sbjct: 126 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----- 180
Query: 158 TATHQHIPYRENKNLTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
H+ E KN+ GT + + LG+E D+ S+G + L G+ P+
Sbjct: 181 ---HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFL 233
Query: 214 G 214
G
Sbjct: 234 G 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIK------LNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
+G GSFG++ L T+ +T ++VA+K L H +++ E K+L+ I
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI 128
D V+VI+ G L D + ++++ Q+I +E+ H +HRD+
Sbjct: 77 VITTPTDI-VMVIEYAGGELFD-YIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDL 134
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-I 187
KP+N L L N V I DFGL+ D K G+ YA+ G +
Sbjct: 135 KPENLL--LDDNLN-VKIADFGLSNIMTDGNFL--------KTSCGSPNYAAPEVINGKL 183
Query: 188 EQSRRDDLESLGYVLMYFLRGSLPW 212
D+ S G VL L G LP+
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN- 66
K+ KIG G+ G +Y ++ T +EVAI+ + P+ + +++ PN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-PNI 80
Query: 67 ---LRWFGVEGDYNVLVIDLLGPSLEDLFN-FCSRKLSLKTVLMLADQMINRVEFVHSKS 122
L + V + V++ L G SL D+ C + + V + + +EF+HS
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 137
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN-LTGTARYASM 181
+HRDIK DN L+G+ V + DFG Q P + ++ + GT + +
Sbjct: 138 VIHRDIKSDNILLGMD---GSVKLTDFGFCA--------QITPEQSKRSXMVGTPYWMAP 186
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ D+ SLG + + + G P+
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNLR--WFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N ++ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW----------XLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N ++ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLMID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K ++++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N ++ + + + DFGLAKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLMID---QQGYIQVTDFGLAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 11 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 68
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 69 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 129 RDLRAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 179
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 224
Query: 244 ---PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 225 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 68 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 125 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAP 176
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 39/224 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYE----------- 51
F+ G+ +G GSF L + T+ E AIK+ K K P + E
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 52 -AKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQ 110
KLY Q + +FG+ N ++ + + C+R +
Sbjct: 92 FVKLYFTFQDDEKL----YFGLSYAKNGELLKYIR-KIGSFDETCTR--------FYTAE 138
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ +E++H K +HRD+KP+N L+ + I DFG AK + R N
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQA----RAN- 190
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
GTA+Y S + DL +LG ++ + G P++
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 68 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 125 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 176
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K ++++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N ++ + + + DFGLAKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLMID---QQGYIKVTDFGLAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N ++ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 39/168 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--------------------LNVKTKHPQ 47
K+ KIG G++G ++ N +T+E VA+K L + KH
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 48 LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLML 107
+ +L+ +L + LV + L+ F+ C+ L + V
Sbjct: 63 I---VRLHDVLHSDKKL-------------TLVFEFCDQDLKKYFDSCNGDLDPEIVKSF 106
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
Q++ + F HS++ LHRD+KP N L+ R ++ + DFGLA+ +
Sbjct: 107 LFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLADFGLARAF 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------TLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQ-LQYEAKLYKILQG 60
++ + +G GSFGE+ + T +E A+K+ + K K + E +L K L
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 61 GTGIPN-LRWFGV-EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEF 117
PN ++ F + E + ++ L E RK S + Q+ + + +
Sbjct: 81 ----PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTAR 177
+H + +HRD+KP+N L+ + + IIDFGL+ ++ + K+ GTA
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--------KMKDRIGTAY 188
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
Y + G + D+ S G +L L G+ P+ G
Sbjct: 189 YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQ-LQYEAKLYKILQG 60
++ + +G GSFGE+ + T +E A+K+ + K K + E +L K L
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 61 GTGIPN-LRWFGV-EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEF 117
PN ++ F + E + ++ L E RK S + Q+ + + +
Sbjct: 81 ----PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTAR 177
+H + +HRD+KP+N L+ + + IIDFGL+ ++ + K+ GTA
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--------KMKDRIGTAY 188
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
Y + G + D+ S G +L L G+ P+ G
Sbjct: 189 YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQG 60
++++L ++G G+F + I T +E A K+ + TK H +L+ EA++ ++L+
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI-INTKKLSARDHQKLEREARICRLLKH 62
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 118
I L E ++ LV DL+ G ED+ S Q++ V
Sbjct: 63 -PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AREYYSEADASHCIQQILESVNHC 119
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152
H +HRD+KP+N L+ + V + DFGLA
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 77
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 138 RDLAAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 188
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 233
Query: 244 ---PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 85
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 145 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------TLCGTPEYL 191
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 192 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 222
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 68 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 125 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 176
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K ++ +
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKIRHEKLVQ 77
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 138 RDLRAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 188
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 233
Query: 244 ---PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 273
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 243
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 304 RDLRAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 354
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 399
Query: 244 ---PTEFASYFH--YCRSLRF--DDKPDYAYLKRLFRDLF 276
P E H C+ R +++P + YL+ D F
Sbjct: 400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G++GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MXGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWF 70
+G G FG+++ T ++A K+ +KT+ +++ E + L I F
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKI-IKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 71 GVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIK 129
+ D VLV++ + G L D S L+ ++ Q+ + +H LH D+K
Sbjct: 156 ESKNDI-VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLK 214
Query: 130 PDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQ 189
P+N L + R A Q+ IIDFGLA+RY+ P + K GT + +
Sbjct: 215 PENILC-VNRDAKQIKIIDFGLARRYK--------PREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 190 SRRDDLESLGYVLMYFLRGSLPWQG 214
S D+ S+G + L G P+ G
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLG 290
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 243
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 304 RDLRAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 354
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 399
Query: 244 ---PTEFASYFH--YCRSLRF--DDKPDYAYLKRLFRDLF 276
P E H C+ R +++P + YL+ D F
Sbjct: 400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQG 60
++++L IG G+F + + T E A K+ + TK H +L+ EA++ ++L+
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKI-INTKKLSARDHQKLEREARICRLLKH 62
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 118
+ I L E ++ LV DL+ G ED+ S Q++ V
Sbjct: 63 -SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHC 119
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152
H +HRD+KP+N L+ + V + DFGLA
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQ-LQYEAKLYKILQGGTGIPN-LR 68
+G GSFGE+ + T +E A+K+ + K K + E +L K L PN ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH----PNIMK 85
Query: 69 WFGV-EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHR 126
F + E + ++ L E RK S + Q+ + + ++H + +HR
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHR 145
Query: 127 DIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG 186
D+KP+N L+ + + IIDFGL+ ++ + K+ GTA Y + G
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--------KMKDRIGTAYYIAPEVLRG 197
Query: 187 IEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ D+ S G +L L G+ P+ G
Sbjct: 198 T-YDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 112/286 (39%), Gaps = 50/286 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHP------QLQYEAKLYKILQGG 61
+L +K+G+G FGE+++ T N T K+ VKT P EA + K LQ
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHT------KVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 62 TGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
+ E Y + G L+ L + K L ++ + Q+ + F+ +
Sbjct: 244 KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYA 179
+++HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 304 NYIHRDLRAANILVSASLVCK---IADFGLARVIEDN----EYTAREGAKFPIKWTAPEA 356
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTXXXXXXXXXXXXVSTSIEA 238
I + D+ S G +LM + G +P+ G+ I A
Sbjct: 357 INFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSN---------------PEVIRA 397
Query: 239 LCRGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
L RGY P E + C R +++P + Y++ + D +
Sbjct: 398 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 24/219 (10%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKI 57
+ + + + ++G G+F + + T E A K+ + TK +L+ EA++ +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI-INTKKLSARDFQKLEREARICRK 60
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVIDLL--GPSLEDLF--NFCSRKLSLKTVLMLADQMIN 113
LQ I L E ++ LV DL+ G ED+ F S + + Q++
Sbjct: 61 LQH-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI----QQILE 115
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
+ + HS +HR++KP+N L+ + V + DFGLA D+
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--------GFA 167
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
GT Y S S+ D+ + G +L L G P+
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 24/219 (10%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKI 57
+ + + + ++G G+F + + T E A K+ + TK +L+ EA++ +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI-INTKKLSARDFQKLEREARICRK 84
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVIDLL--GPSLEDLF--NFCSRKLSLKTVLMLADQMIN 113
LQ I L E ++ LV DL+ G ED+ F S + + Q++
Sbjct: 85 LQH-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI----QQILE 139
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
+ + HS +HR++KP+N L+ + V + DFGLA D+
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--------GFA 191
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
GT Y S S+ D+ + G +L L G P+
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 24/219 (10%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKI 57
+ + + + ++G G+F + + T E A K+ + TK +L+ EA++ +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI-INTKKLSARDFQKLEREARICRK 61
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVIDLL--GPSLEDLF--NFCSRKLSLKTVLMLADQMIN 113
LQ I L E ++ LV DL+ G ED+ F S + + Q++
Sbjct: 62 LQH-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI----QQILE 116
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
+ + HS +HR++KP+N L+ + V + DFGLA D+
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--------GFA 168
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
GT Y S S+ D+ + G +L L G P+
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
++ RLGR GSFGE++ + QT + A+K +++ E + L G+ +
Sbjct: 78 HQLRLGR----GSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTS 125
Query: 67 LR---WFGV--EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
R +G EG + + ++LL G SL L L L Q + +E++HS
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE-QGCLPEDRALYYLGQALEGLEYLHS 184
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY------RDTATHQHIPYRENKNLTG 174
+ LH D+K DN L L + + DFG A +D T +IP G
Sbjct: 185 RRILHGDVKADNVL--LSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP--------G 234
Query: 175 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
T + + LG + D+ S ++++ L G PW
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTGIP 65
F L + +G GSFG+++L +TN+ AIK +V ++ ++L P
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 66 NLRW----FGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
L F + + ++ L G L C K L A ++I ++F+HSK
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSK 138
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR--YRDTATHQHIPYRENKNLTGTARYA 179
++RD+K DN L+ + + I DFG+ K D T++ GT Y
Sbjct: 139 GIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNE---------FCGTPDYI 186
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ LG + + D S G +L L G P+ G
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G FGE+++G + +VA+K L + P EA L K LQ +
Sbjct: 11 LKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 67
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 68 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 126
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HR+++ N L+ I DFGLA+ D RE + TA A
Sbjct: 127 IHRNLRAANILVS---DTLSCKIADFGLARLIEDNEYTA----REGAKFPIKWTAPEAIN 179
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 180 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 220
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 221 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 264
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ----LQYEAKLYKILQG 60
V + + + ++G+G+FG ++ T T A K V T H ++ E + +L+
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF-VMTPHESDKETVRKEIQTMSVLRH 213
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEF 117
T + NL + + V++ + + S +LF + K+S + Q+ +
Sbjct: 214 PTLV-NLHDAFEDDNEMVMIYEFM--SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTAR 177
+H +++H D+KP+N +M +R+N++ +IDFGL T P + K TGTA
Sbjct: 271 MHENNYVHLDLKPEN-IMFTTKRSNELKLIDFGL--------TAHLDPKQSVKVTTGTAE 321
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+A+ G D+ S+G + L G P+ G
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 24/219 (10%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKI 57
+ + + + ++G G+F + + T E A K+ + TK +L+ EA++ +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI-INTKKLSARDFQKLEREARICRK 61
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVIDLL--GPSLEDLF--NFCSRKLSLKTVLMLADQMIN 113
LQ I L E ++ LV DL+ G ED+ F S + + Q++
Sbjct: 62 LQH-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI----QQILE 116
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
+ + HS +HR++KP+N L+ + V + DFGLA D+
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--------GFA 168
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
GT Y S S+ D+ + G +L L G P+
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 13 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 70
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 71 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 131 RDLRAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 181
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 226
Query: 244 ---PTEFASYFH--YCRSLRF--DDKPDYAYLKRLFRDLF 276
P E H C+ R +++P + YL+ D F
Sbjct: 227 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 266
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ----LQYEAKLYKILQG 60
V + + + ++G+G+FG ++ T T A K V T H ++ E + +L+
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF-VMTPHESDKETVRKEIQTMSVLRH 107
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
T + NL + + V++ + + G L + K+S + Q+ + +H
Sbjct: 108 PTLV-NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+++H D+KP+N +M +R+N++ +IDFGL T P + K TGTA +A
Sbjct: 167 ENNYVHLDLKPEN-IMFTTKRSNELKLIDFGL--------TAHLDPKQSVKVTTGTAEFA 217
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ G D+ S+G + L G P+ G
Sbjct: 218 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 252
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 33/169 (19%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTG 63
+V + + + IG GS+G +YL + N+ VAI K + + +IL+ T
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAI----KKVNRMFEDLIDCKRILREITI 80
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL-----------KTVLMLADQMI 112
+ L+ DY + + DL+ P EDL F + L KT + L +Q +
Sbjct: 81 LNRLK-----SDYIIRLHDLIIP--EDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHV 133
Query: 113 NRV--------EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ +F+H +HRD+KP N L+ + V I DFGLA+
Sbjct: 134 KTILYNLLLGEKFIHESGIIHRDLKPANCLLN---QDCSVKICDFGLAR 179
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-----LNVKTKHPQLQYEAKLYKILQ 59
VG+++ + IG+G++G + T ++VAIK +V T + E K+ K +
Sbjct: 53 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK 112
Query: 60 GGTGI-------PNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMI 112
I P + + + Y +V+DL+ L + + S+ L+L+ V Q++
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVY--VVLDLMESDLHQIIH-SSQPLTLEHVRYFLYQLL 169
Query: 113 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-RYRDTATHQHIPYRENKN 171
++++HS +HRD+KP N L+ ++ I DFG+A+ A HQ+
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFGMARGLCTSPAEHQYF----MTE 222
Query: 172 LTGTARYASMNTHLGI-EQSRRDDLESLGYVL 202
T Y + L + E ++ DL S+G +
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIF 254
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN-L 67
+ L + +G G++GE+ L N T E VA+K+ + K + N +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 68 RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSKSFLH 125
+++G + N+ + L S +LF+ + + Q++ V ++H H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 129 RDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAPELLK 180
Query: 186 GIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 40/239 (16%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKI 57
R + ++L ++G G+F + +E A K+ + TK H +L+ EA++ ++
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKI-INTKKLSARDHQKLEREARICRL 86
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRV 115
L+ I L E ++ LV DL+ G ED+ S Q++ V
Sbjct: 87 LKH-PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV--AREYYSEADASHCIHQILESV 143
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+H +HRD+KP+N L+ + V + DFGLA + E + G
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG----------EQQAWFG- 192
Query: 176 ARYASMNTHLGIEQSRRD------DLESLGYVLMYFLRGSLP---------WQGLKAGT 219
+A +L E R+D D+ + G +L L G P +Q +KAG
Sbjct: 193 --FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGA 249
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ-LQYEAKLYKILQGGTGIPN 66
+L ++G+G GE+++G + +VA+K L + P EA L K LQ +
Sbjct: 15 LKLVERLGAGQAGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLV-- 71
Query: 67 LRWFGVEGDYNVLVID--LLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSF 123
R + V + +I + SL D S KL++ +L +A Q+ + F+ +++
Sbjct: 72 -RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYASM 181
+HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 131 IHRDLRAANILVS---DTLSCKIADFGLARLIEDAEXTA----REGAKFPIKWTAPEAIN 183
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
I + D+ S G +L + G +P+ G+ I+ L
Sbjct: 184 YGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTN---------------PEVIQNLE 224
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E C R +D+P + YL+ + D F
Sbjct: 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNLR--WFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + A Q++ E++H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N ++ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW----------XLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQ-LQYEAKLYKILQGGTG 63
+ L + +G G+ GE+ L N T E VA+K+ V K P+ ++ E + K+L
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKI-VDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKT--VLMLADQMINRVEFVHSK 121
+ +++G + N+ + L S +LF+ + + Q++ V ++H
Sbjct: 67 V---KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
HRDIKP+N L L R N + I DFGLA +R + + NK + GT Y +
Sbjct: 124 GITHRDIKPENLL--LDERDN-LKISDFGLATVFRYNNRERLL----NK-MCGTLPYVAP 175
Query: 182 NTHLGIE-QSRRDDLESLGYVLMYFLRGSLPW 212
E + D+ S G VL L G LPW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 18/161 (11%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-----LNVKTKHPQLQYEAKLYKILQ 59
VG+++ + IG+G++G + T ++VAIK +V T + E K+ K +
Sbjct: 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK 111
Query: 60 GGTGI-------PNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMI 112
I P + + + Y +V+DL+ L + + S+ L+L+ V Q++
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVY--VVLDLMESDLHQIIH-SSQPLTLEHVRYFLYQLL 168
Query: 113 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++++HS +HRD+KP N L+ ++ I DFG+A+
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFGMAR 206
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 1 MEP----RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---------TKHPQ 47
MEP +V + + +G ++GSG F + T E A K K +
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 48 LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVL 105
++ E + + + I + D VL+++L+ +LF+F ++K SL +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGG--ELFDFLAQKESLSEEEAT 118
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNF-LMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164
Q+++ V ++H+K H D+KP+N L+ + +IDFGLA D
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----- 173
Query: 165 PYRENKNLTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
E KN+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 174 ---EFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 220
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 78 VLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHRDIKPDNF-L 134
VL+++L+ +LF+F ++K SL + Q+++ V ++H+K H D+KP+N L
Sbjct: 91 VLILELVSGG--ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Query: 135 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT----HLGIEQS 190
+ + +IDFGLA D E KN+ GT + + LG+E
Sbjct: 149 LDKNIPIPHIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEA- 199
Query: 191 RRDDLESLGYVLMYFLRGSLPWQG 214
D+ S+G + L G+ P+ G
Sbjct: 200 ---DMWSIGVITYILLSGASPFLG 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-----QLQYEAKLYKILQGGTGIPNLRW 69
+G G+ + N+ T++E A+K + K P ++ E ++ QG + L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVK--IIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 70 FGVEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 127
F E D LV + + G L + R + ++ + + ++F+H+K HRD
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
+KP+N L + + V I DFGL + I E G+A Y +
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 188 EQS-----RRDDLESLGYVLMYFLRGSLPWQG 214
+ +R DL SLG +L L G P+ G
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N ++ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW----------XLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 1 MEP----RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---------TKHPQ 47
MEP +V + + +G ++GSG F + T E A K K +
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 48 LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVL 105
++ E + + + I + D VL+++L+ +LF+F ++K SL +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGG--ELFDFLAQKESLSEEEAT 118
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNF-LMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164
Q+++ V ++H+K H D+KP+N L+ + +IDFGLA D
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----- 173
Query: 165 PYRENKNLTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
E KN+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 174 ---EFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 220
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N ++ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 243
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 244 LYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 304 RDLRAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 354
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 399
Query: 244 ---PTEFASYFH--YCRSLRF--DDKPDYAYLKRLFRDLF 276
P E H C+ R +++P + YL+ D F
Sbjct: 400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 1 MEP----RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---------TKHPQ 47
MEP +V + + +G ++GSG F + T E A K K +
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 48 LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVL 105
++ E + + + I + D VL+++L+ +LF+F ++K SL +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGG--ELFDFLAQKESLSEEEAT 118
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNF-LMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164
Q+++ V ++H+K H D+KP+N L+ + +IDFGLA D
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----- 173
Query: 165 PYRENKNLTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
E KN+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 174 ---EFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 220
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 55/232 (23%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---------------------T 43
+GN +++ + +G GSFG++ L + T ++VA+K+ K
Sbjct: 3 IGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 61
Query: 44 KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSL 101
+HP + KLY +++ I ++VI+ G +LF++ + K+S
Sbjct: 62 RHPHI---IKLYDVIKSKDEI-------------IMVIEYAG---NELFDYIVQRDKMSE 102
Query: 102 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161
+ Q+I+ VE+ H +HRD+KP+N L L N V I DFGL+ D
Sbjct: 103 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLL--LDEHLN-VKIADFGLSNIMTDGNFL 159
Query: 162 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 212
K G+ YA+ G + D+ S G +L L LP+
Sbjct: 160 --------KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 1 MEP----RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---------TKHPQ 47
MEP +V + + +G ++GSG F + T E A K K +
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 48 LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVL 105
++ E + + + I + D VL+++L+ +LF+F ++K SL +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGG--ELFDFLAQKESLSEEEAT 118
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNF-LMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164
Q+++ V ++H+K H D+KP+N L+ + +IDFGLA D
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----- 173
Query: 165 PYRENKNLTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
E KN+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 174 ---EFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 220
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 55/232 (23%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---------------------T 43
+GN +++ + +G GSFG++ L + T ++VA+K+ K
Sbjct: 12 IGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 70
Query: 44 KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSL 101
+HP + KLY +++ I ++VI+ G +LF++ + K+S
Sbjct: 71 RHPHI---IKLYDVIKSKDEI-------------IMVIEYAG---NELFDYIVQRDKMSE 111
Query: 102 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161
+ Q+I+ VE+ H +HRD+KP+N L L N V I DFGL+ D
Sbjct: 112 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLL--LDEHLN-VKIADFGLSNIMTDGNFL 168
Query: 162 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 212
K G+ YA+ G + D+ S G +L L LP+
Sbjct: 169 --------KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 55/232 (23%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---------------------T 43
+GN +++ + +G GSFG++ L + T ++VA+K+ K
Sbjct: 13 IGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 71
Query: 44 KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSL 101
+HP + KLY +++ I ++VI+ G +LF++ + K+S
Sbjct: 72 RHPHI---IKLYDVIKSKDEI-------------IMVIEYAG---NELFDYIVQRDKMSE 112
Query: 102 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161
+ Q+I+ VE+ H +HRD+KP+N L L N V I DFGL+ D
Sbjct: 113 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLL--LDEHLN-VKIADFGLSNIMTDGNFL 169
Query: 162 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 212
K G+ YA+ G + D+ S G +L L LP+
Sbjct: 170 --------KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN- 66
K+ KIG G+ G +Y ++ T +EVAI+ + P+ + +++ PN
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-PNI 80
Query: 67 ---LRWFGVEGDYNVLVIDLLGPSLEDLFN-FCSRKLSLKTVLMLADQMINRVEFVHSKS 122
L + V + V++ L G SL D+ C + + V + + +EF+HS
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 137
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN-LTGTARYASM 181
+HR+IK DN L+G+ V + DFG Q P + ++ + GT + +
Sbjct: 138 VIHRNIKSDNILLGMD---GSVKLTDFGFCA--------QITPEQSKRSTMVGTPYWMAP 186
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ D+ SLG + + + G P+
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 111/285 (38%), Gaps = 50/285 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHP------QLQYEAKLYKILQGG 61
+L +K+G+G FGE+++ T N T K+ VKT P EA + K LQ
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHT------KVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 62 TGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
+ E Y + G L+ L + K L ++ + Q+ + F+ +
Sbjct: 71 KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYA 179
+++HRD++ N L+ I DFGLA+ D RE + TA A
Sbjct: 131 NYIHRDLRAANILVSASLVCK---IADFGLARVIEDNEYTA----REGAKFPIKWTAPEA 183
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTXXXXXXXXXXXXVSTSIEA 238
I + D+ S G +LM + G +P+ G+ I A
Sbjct: 184 INFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSN---------------PEVIRA 224
Query: 239 LCRGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275
L RGY P E + C R +++P + Y++ + D
Sbjct: 225 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 92
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 152 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 198
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 199 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 229
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 55/232 (23%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---------------------T 43
+GN +++ + +G GSFG++ L + T ++VA+K+ K
Sbjct: 7 IGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 65
Query: 44 KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSL 101
+HP + KLY +++ I ++VI+ G +LF++ + K+S
Sbjct: 66 RHPHI---IKLYDVIKSKDEI-------------IMVIEYAG---NELFDYIVQRDKMSE 106
Query: 102 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161
+ Q+I+ VE+ H +HRD+KP+N L L N V I DFGL+ D
Sbjct: 107 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLL--LDEHLN-VKIADFGLSNIMTDGNFL 163
Query: 162 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 212
K G+ YA+ G + D+ S G +L L LP+
Sbjct: 164 --------KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 39/168 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--------------------LNVKTKHPQ 47
K+ KIG G++G ++ N +T+E VA+K L + KH
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 48 LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLML 107
+ +L+ +L + LV + L+ F+ C+ L + V
Sbjct: 63 I---VRLHDVLHSDKKL-------------TLVFEFCDQDLKKYFDSCNGDLDPEIVKSF 106
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
Q++ + F HS++ LHRD+KP N L+ R ++ + +FGLA+ +
Sbjct: 107 LFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAF 151
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 120
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 180 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 226
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 227 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 257
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 68 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 124
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 125 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 175
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 218
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 68 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 124
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 125 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 175
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 218
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 78 VLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHRDIKPDNF-L 134
VL+++L+ +LF+F ++K SL + Q+++ V ++H+K H D+KP+N L
Sbjct: 91 VLILELVSGG--ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Query: 135 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT----HLGIEQS 190
+ + +IDFGLA D E KN+ GT + + LG+E
Sbjct: 149 LDKNIPIPHIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEA- 199
Query: 191 RRDDLESLGYVLMYFLRGSLPWQG 214
D+ S+G + L G+ P+ G
Sbjct: 200 ---DMWSIGVITYILLSGASPFLG 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + A Q++ E++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + A Q++ E++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 160 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 206
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 207 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTG 63
++G+ + LG +G G+FG++ +G + T +VA+K+ + K L K+ + +Q
Sbjct: 14 KIGH-YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 64 IPN---LRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
+ ++ + V + + + + S +LF++ + +L K L Q+++ V++
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
H +HRD+KP+N L+ A I DFGL+ D + G+ Y
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAK---IADFGLSNMMSDGEF--------LRXSCGSPNY 181
Query: 179 ASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 212
A+ G + D+ S G +L L G+LP+
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 34/235 (14%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEE-----VAIKLNVKTKHPQ----LQYEAK 53
PR N + G+ +G+G+FG++ T +E VA+K+ T H L E K
Sbjct: 36 PR--NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK------------LSL 101
+ L I NL G +++ + DL NF RK L L
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYC--CYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 102 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161
+ +L + Q+ + F+ SK+ +HRD+ N L+ G A I DFGLA RD
Sbjct: 152 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK---IGDFGLA---RDIMND 205
Query: 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 215
+ + N L ++ + + + + D+ S G +L F G P+ G+
Sbjct: 206 SNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 258
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKIL-----Q 59
+++ + IG GSFG++ + E VAIK+ N K Q Q E +L +++ +
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE 94
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLF-NFCSRKLSLKTVLMLADQMINRVEFV 118
I +L+ + ++ LV ++L +L DL N R +SL A QM + F+
Sbjct: 95 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 154
Query: 119 HSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
+ S +H D+KP+N L+ +R+ + I+DFG + + +Q I R
Sbjct: 155 ATPELSIIHCDLKPENILLCNPKRS-AIKIVDFGSSCQL-GQRIYQXIQSR--------- 203
Query: 177 RYASMNTHLGIEQSRRDDLESLGYVLM 203
Y S LG+ D+ SLG +L+
Sbjct: 204 FYRSPEVLLGMPYDLAIDMWSLGCILV 230
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 28/172 (16%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEE-----VAIKLNVKTKHPQ----LQYEAK 53
PR N + G+ +G+G+FG++ T +E VA+K+ T H L E K
Sbjct: 44 PR--NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK------------LSL 101
+ L I NL G +++ + DL NF RK L L
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYC--CYGDLLNFLRRKAEADLDKEDGRPLEL 159
Query: 102 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ +L + Q+ + F+ SK+ +HRD+ N L+ G A I DFGLA+
Sbjct: 160 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK---IGDFGLAR 208
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 19/220 (8%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
++PR ++ GR +G G F + Y T++ T E A K+ K+ + + K+ +
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 61 GTGIPNLRWFGVEG-----DYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
+ N G G D+ +V+++ L R+ ++ Q I
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V+++H+ +HRD+K N + V I DFGLA + + K+L
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERK-------KDLC 203
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
GT Y + S D+ SLG +L L G P++
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L +++T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+D + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP+N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 124 VLHRDLKPENLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 173
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIF 194
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 15/158 (9%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNL 67
R +GSG++G + + + ++VA+K + H + Y E +L K L+ I L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 68 RWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 122
F +E V LV L+G L ++ S+ LS + V L Q++ ++++HS
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVK--SQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
+HRD+KP N + +++ I+DFGLA++ + T
Sbjct: 152 IIHRDLKPSNVAVN---EDSELRILDFGLARQADEEMT 186
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 34/223 (15%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTG 63
++G+ + LG +G G+FG++ +G + T +VA+K+ + K L K+ + +Q
Sbjct: 9 KIGH-YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ---- 63
Query: 64 IPNLRWF---GVEGDYNV--------LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQ 110
NL+ F + Y V +V++ + S +LF++ + ++ L Q
Sbjct: 64 --NLKLFRHPHIIKLYQVISTPTDFFMVMEYV--SGGELFDYICKHGRVEEMEARRLFQQ 119
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ V++ H +HRD+KP+N L+ A I DFGL+ D +
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK---IADFGLSNMMSDGEF--------LR 168
Query: 171 NLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 212
+ G+ YA+ G + D+ S G +L L G+LP+
Sbjct: 169 DSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 23/145 (15%)
Query: 78 VLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLM 135
+L+++L+ +LF+F + K SL + Q++N V ++HS H D+KP+N ++
Sbjct: 90 ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
Query: 136 GLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT----HLGIEQ 189
L R + + IIDFGLA H+ E KN+ GT + + LG+E
Sbjct: 148 -LDRNVPKPRIKIIDFGLA--------HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 190 SRRDDLESLGYVLMYFLRGSLPWQG 214
D+ S+G + L G+ P+ G
Sbjct: 199 ----DMWSIGVITYILLSGASPFLG 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+++ L + IGSG+FG L + Q+NE VA+K + + ++ K I PN
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE--KIAANVKREIINHRSLRHPN 76
Query: 67 L-RWFGVEGDYNVLVIDLLGPSLEDLFN-FCSR-KLSLKTVLMLADQMINRVEFVHSKSF 123
+ R+ V L I + S +LF C+ + S Q+I+ V + H+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT 183
HRD+K +N L+ G A ++ I DFG +K + + + K+ GT Y +
Sbjct: 137 CHRDLKLENTLLD-GSPAPRLKICDFGYSK--------SSVLHSQPKSTVGTPAYIAPEV 187
Query: 184 HLGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 213
L E + D+ S G L L G+ P++
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKIL-----Q 59
+++ + IG GSFG++ + E VAIK+ N K Q Q E +L +++ +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLF-NFCSRKLSLKTVLMLADQMINRVEFV 118
I +L+ + ++ LV ++L +L DL N R +SL A QM + F+
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 119 HSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
+ S +H D+KP+N L+ +R+ + I+DFG + + +Q I R
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRS-AIKIVDFGSSCQL-GQRIYQXIQSR--------- 222
Query: 177 RYASMNTHLGIEQSRRDDLESLGYVLM 203
Y S LG+ D+ SLG +L+
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILV 249
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP---QLQYEAKLYKILQGGT 62
++ L +IGSGSFG +Y G + + +VA+K+ +K P Q Q +L+
Sbjct: 35 ASEVMLSTRIGSGSFGTVYKG---KWHGDVAVKI-LKVVDPTPEQFQAFRNEVAVLRKTR 90
Query: 63 GIPNLRWFGVEGDYNVLVID--LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
+ L + G N+ ++ G SL + K + ++ +A Q ++++H+
Sbjct: 91 HVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
K+ +HRD+K +N + G V I DFGLA + Q + L
Sbjct: 151 KNIIHRDMKSNNIFLHEGL---TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 181 MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
M + S + D+ S G VL + G LP+
Sbjct: 208 MQDNNPF--SFQSDVYSYGIVLYELMTGELPY 237
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+++ L + IGSG+FG L + Q+NE VA+K + + ++ K I PN
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE--KIDENVKREIINHRSLRHPN 75
Query: 67 L-RWFGVEGDYNVLVIDLLGPSLEDLFN-FCSR-KLSLKTVLMLADQMINRVEFVHSKSF 123
+ R+ V L I + S +LF C+ + S Q+I+ V + H+
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT 183
HRD+K +N L+ G A ++ I DFG +K + + + K+ GT Y +
Sbjct: 136 CHRDLKLENTLLD-GSPAPRLKICDFGYSK--------SSVLHSQPKSTVGTPAYIAPEV 186
Query: 184 HLGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 213
L E + D+ S G L L G+ P++
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 19/220 (8%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
++PR ++ GR +G G F + Y T++ T E A K+ K+ + + K+ +
Sbjct: 20 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 79
Query: 61 GTGIPNLRWFGVEG-----DYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
+ N G G D+ +V+++ L R+ ++ Q I
Sbjct: 80 HKSLDNPHVVGFHGFFEDDDFVYVVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQ 137
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V+++H+ +HRD+K N + V I DFGLA + + K+L
Sbjct: 138 GVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERK-------KDLC 187
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
GT Y + S D+ SLG +L L G P++
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLY 55
V + + G ++GSG F + T + A K K + ++ E +
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
K +Q I + + D +L+++L+ +LF+F + K SL + Q++N
Sbjct: 69 KEIQHPNVITLHEVYENKTDV-ILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKRYRDTATHQHIPYRENKN 171
V ++HS H D+KP+N +M L R + + IIDFGLA H+ E KN
Sbjct: 126 GVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLA--------HKIDFGNEFKN 176
Query: 172 LTGTARYASMNT----HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ GT + + LG+E D+ S+G + L G+ P+ G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASPFLG 219
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 19/220 (8%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
++PR ++ GR +G G F + Y T++ T E A K+ K+ + + K+ +
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 61 GTGIPNLRWFGVEG-----DYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
+ N G G D+ +V+++ L R+ ++ Q I
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V+++H+ +HRD+K N + V I DFGLA + + K L
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERK-------KTLC 203
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
GT Y + S D+ SLG +L L G P++
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+D + + + L + Q++ + F HS
Sbjct: 67 VKLLDVIHTENKLY-LVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 126 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 175
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIF 196
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 74
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ ++ Q+ + + +V +++H
Sbjct: 75 LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGLA+ D Y + ++ + L
Sbjct: 135 RDLRAANILVGENLVCK---VADFGLARLIEDNE------YTARQGAKFPIKWTAPEAAL 185
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 230
Query: 244 ---PTEFASYFH--YCRSLRF--DDKPDYAYLKRLFRDLF 276
P E H C+ R +++P + YL+ D F
Sbjct: 231 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 38/280 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L P+ LQ EA++ K L+ +
Sbjct: 187 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQ-EAQVMKKLRHEKLVQ 244
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ +A Q+ + + +V +++H
Sbjct: 245 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD++ N L+G + DFGL + D Y + ++ + L
Sbjct: 305 RDLRAANILVGENLVCK---VADFGLGRLIEDNE------YTARQGAKFPIKWTAPEAAL 355
Query: 186 GIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY- 243
+ + D+ S G +L +G +P+ G+ V +E RGY
Sbjct: 356 YGRFTIKSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---RGYR 400
Query: 244 ---PTEFASYFH--YCRSLRFD--DKPDYAYLKRLFRDLF 276
P E H C+ R D ++P + YL+ D F
Sbjct: 401 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYF 440
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 18/200 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+D + + + L + Q++ + F HS
Sbjct: 68 VKLLDVIHTENKLY-LVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 127 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 176
Query: 183 THLGIE-QSRRDDLESLGYV 201
LG + S D+ SLG +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCI 196
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 50/286 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 10 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLV- 66
Query: 66 NLRWFGVEGDYNVLVIDLL---GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 122
+ + V + + ++ G L+ L + L L ++ +A Q+ + + +V +
Sbjct: 67 --QLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 124
Query: 123 FLHRDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKN--LTGTARYA 179
++HRD++ N L+G N V + DFGLA+ D R+ + TA A
Sbjct: 125 YVHRDLRAANILVG----ENLVCKVADFGLARLIEDNEXTA----RQGAKFPIKWTAPEA 176
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEA 238
++ I + D+ S G +L +G +P+ G+ V +E
Sbjct: 177 ALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE- 219
Query: 239 LCRGY----PTEFASYFH--YCRSLRF--DDKPDYAYLKRLFRDLF 276
RGY P E H C+ R +++P + YL+ D F
Sbjct: 220 --RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 263
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTG 63
++G+ + LG +G G+FG++ +G + T +VA+K+ + K L K+ + +Q
Sbjct: 9 KIGH-YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ---- 63
Query: 64 IPNLRWF---GVEGDYNV--------LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQ 110
NL+ F + Y V +V++ + S +LF++ + ++ L Q
Sbjct: 64 --NLKLFRHPHIIKLYQVISTPTDFFMVMEYV--SGGELFDYICKHGRVEEMEARRLFQQ 119
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+++ V++ H +HRD+KP+N L+ A I DFGL+ D +
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK---IADFGLSNMMSDGEF--------LR 168
Query: 171 NLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPW 212
G+ YA+ G + D+ S G +L L G+LP+
Sbjct: 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
++ RLGR GSFGE++ + QT + A+K +++ E + L G+ +
Sbjct: 97 HQLRLGR----GSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTS 144
Query: 67 LRWFGV-----EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
R + EG + + ++LL G SL L L L Q + +E++HS
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE-QGCLPEDRALYYLGQALEGLEYLHS 203
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
+ LH D+K DN L L + + DFG A + + + + GT + +
Sbjct: 204 RRILHGDVKADNVL--LSSDGSHAALCDFGHAVCLQPDGLGKSL--LTGDYIPGTETHMA 259
Query: 181 MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
LG + D+ S ++++ L G PW
Sbjct: 260 PEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L + + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L + + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L + + + N+ ++ P E +F+ R + S A Q++ E++H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 205
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 14/214 (6%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
V + + + ++GSG+FG ++ T K + T +P +Y K +
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKF-INTPYPLDKYTVKNEISIMNQLHH 107
Query: 65 PNLRWF--GVEGDYN-VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
P L E Y VL+++ L G L D K+S V+ Q ++ +H
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
S +H DIKP+N +M ++A+ V IIDFGLA + P K T TA +A+
Sbjct: 168 HSIVHLDIKPEN-IMCETKKASSVKIIDFGLATKLN--------PDEIVKVTTATAEFAA 218
Query: 181 MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
D+ ++G + L G P+ G
Sbjct: 219 PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTGIP 65
F L + +G GSFG+++L +TN+ AIK +V ++ ++L P
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 66 NLRW----FGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
L F + + ++ L G L C K L A ++I ++F+HSK
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSK 137
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR--YRDTATHQHIPYRENKNLTGTARYA 179
++RD+K DN L+ + + I DFG+ K D T+ GT Y
Sbjct: 138 GIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNX---------FCGTPDYI 185
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ LG + + D S G +L L G P+ G
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKIL-----Q 59
+++ + IG GSFG++ + E VAIK+ N K Q Q E +L +++ +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLF-NFCSRKLSLKTVLMLADQMINRVEFV 118
I +L+ + ++ LV ++L +L DL N R +SL A QM + F+
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 119 HSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
+ S +H D+KP+N L+ +R + I+DFG + + +Q I R
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRX-AIKIVDFGSSCQL-GQRIYQXIQSR--------- 222
Query: 177 RYASMNTHLGIEQSRRDDLESLGYVLM 203
Y S LG+ D+ SLG +L+
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILV 249
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 19/220 (8%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
++PR ++ GR +G G F + Y T++ T E A K+ K+ + + K+ +
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 61 GTGIPNLRWFGVEG-----DYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMIN 113
+ N G G D+ +V+++ L R+ ++ Q I
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEIC--RRRSLLELHKRRKAVTEPEARYFMRQTIQ 153
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173
V+++H+ +HRD+K N + V I DFGLA + + K L
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERK-------KXLC 203
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
GT Y + S D+ SLG +L L G P++
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG 174
++F+H+K HRD+KP+N L + + V I DF L + + I E G
Sbjct: 124 LDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 175 TARY-ASMNTHLGIEQS----RRDDLESLGYVLMYFLRGSLPWQG 214
+A Y A + +Q+ +R DL SLG VL L G P+ G
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFG- 71
+IG GSFGE+Y G + T E VAIK ++++ +++ + +L R+FG
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 72 -VEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIK 129
++ ++++ L G S DL L + + +++ ++++HS+ +HRDIK
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 130 PDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQ 189
N L+ V + DFG+A + DT ++ GT + + I+Q
Sbjct: 144 AANVLLS---EQGDVKLADFGVAGQLTDTQIKRN-------XFVGTPFWMAPEV---IKQ 190
Query: 190 SRRD---DLESLGYVLMYFLRGSLP 211
S D D+ SLG + +G P
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPP 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 108/284 (38%), Gaps = 56/284 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHP------QLQYEAKLYKILQGG 61
+L +K+G+G FGE+++ T N T K+ VKT P EA + K LQ
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKHT------KVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 62 TGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
+ E Y + G L+ L + K L ++ + Q+ + F+ +
Sbjct: 238 KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
+++HRD++ N L+ I DFGLA+ P N + S
Sbjct: 298 NYIHRDLRAANILVSASLVCK---IADFGLARVGAKFPIKWTAPEAIN--------FGSF 346
Query: 182 NTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALC 240
+ D+ S G +LM + G +P+ G+ I AL
Sbjct: 347 TI--------KSDVWSFGILLMEIVTYGRIPYPGMSN---------------PEVIRALE 383
Query: 241 RGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
RGY P E + C R +++P + Y++ + D +
Sbjct: 384 RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 427
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
++F L + +G GSFG+++L I ++ + K L+ ++ ++ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 67 LRWFGVEGDYNV-------LVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEF 117
F V+ Y L++D L DLF S+++ + V ++ ++
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTAR 177
+HS ++RD+KP+N L+ + + DFGL+K D H+ Y + GT
Sbjct: 142 LHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESID---HEKKAY----SFCGTVE 191
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
Y + ++ D S G ++ L G+LP+QG
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 15/189 (7%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKI 57
P F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVE 116
L + L E LV + L L+ + + + L + Q++ +
Sbjct: 66 LNHPNIVKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKN 171
F HS LHRD+KP N L+ + + DFGLA+ + T TH+ + YR +
Sbjct: 125 FCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 172 LTGTARYAS 180
L G Y++
Sbjct: 182 LLGCKYYST 190
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + ++++ ++A+K + H + Y E +L K +
Sbjct: 48 EVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 165
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 166 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 209
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNL 67
R +GSG++G + + + ++VA+K + H + Y E +L K L+ I L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 68 RWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 122
F +E V LV L+G L ++ + LS + V L Q++ ++++HS
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
+HRD+KP N + +++ I+DFGLA++ + T
Sbjct: 152 IIHRDLKPSNVAVN---EDSELRILDFGLARQADEEMT 186
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGT 62
++L ++G G+F + + +E A K+ + TK H +L+ EA++ ++L+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKI-INTKKLSARDHQKLEREARICRLLKH-P 81
Query: 63 GIPNLRWFGVEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
I L E ++ L+ DL+ G ED+ S Q++ V H
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIV--AREYYSEADASHCIQQILEAVLHCHQ 139
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
+HRD+KP+N L+ + V + DFGLA E + G +A
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG----------EQQAWFG---FAG 186
Query: 181 MNTHLGIEQSRRD------DLESLGYVLMYFLRGSLP---------WQGLKAGT 219
+L E R+D DL + G +L L G P +Q +KAG
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGA 240
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 120/283 (42%), Gaps = 44/283 (15%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQ--LQYEAKLYKILQGGTGIP 65
RL K+G G FGE+++GT T VAIK L T P+ LQ EA++ K L+ +
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQ 74
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
E Y V G L+ L + L L ++ ++ Q+ + + +V +++H
Sbjct: 75 LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 126 RDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDT--ATHQHIPYRENKNLTGTARYASMN 182
RD++ N L+G N V + DFGLA+ D Q + + TA A++
Sbjct: 135 RDLRAANILVG----ENLVCKVADFGLARLIEDNEWTARQGAKF----PIKWTAPEAALY 186
Query: 183 THLGIEQSRRDDLESLGYVLMYF-LRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCR 241
I + D+ S G +L +G +P+ G+ V +E R
Sbjct: 187 GRFTI----KSDVWSFGILLTELTTKGRVPYPGM------------VNREVLDQVE---R 227
Query: 242 GY----PTEFASYFH--YCRSLRF--DDKPDYAYLKRLFRDLF 276
GY P E H C+ R +++P + YL+ D F
Sbjct: 228 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 270
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 72
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + +++ + +L D C+R+ +S +L +A Q+ + +E++ K+F
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 133 IHRDLAARNCLVG---ENHLVKVADFGLSR 159
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + + +T VA+K + H + Y E +L K +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 142
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 186
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 15/189 (7%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKI 57
P F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVE 116
L + L E LV + L L+ + + + L + Q++ +
Sbjct: 66 LNHPNIVKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKN 171
F HS LHRD+KP N L+ + + DFGLA+ + T TH+ + YR +
Sbjct: 125 FCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 172 LTGTARYAS 180
L G Y++
Sbjct: 182 LLGXKYYST 190
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + +T A+K+ K K Q+++ +ILQ
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 92
Query: 64 IPNL--RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 119
P L F + + N+ ++ P E +F+ R + A Q++ E++H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 152 SLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEYL 198
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 199 APEIILSKGYNKAVDWWALG-VLIYEMAAGYP 229
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 38/239 (15%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEE-----VAIKLNVKTKHPQ----LQYEAK 53
PR N + G+ +G+G+FG++ T +E VA+K+ T H L E K
Sbjct: 44 PR--NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--------------- 98
+ L I NL G +++ + DL NF RK
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYC--CYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 99 -LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
LS + +L + Q+ + F+ SK+ +HRD+ N L+ G A I DFGLA RD
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK---IGDFGLA---RD 213
Query: 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 215
+ + N L ++ + + + + D+ S G +L F G P+ G+
Sbjct: 214 IMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 21/133 (15%)
Query: 90 DLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ--VY 145
+LF+F + K SL + Q++N V ++HS H D+KP+N +M L R + +
Sbjct: 100 ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIK 158
Query: 146 IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT----HLGIEQSRRDDLESLGYV 201
IIDFGLA H+ E KN+ GT + + LG+E D+ S+G +
Sbjct: 159 IIDFGLA--------HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVI 206
Query: 202 LMYFLRGSLPWQG 214
L G+ P+ G
Sbjct: 207 TYILLSGASPFLG 219
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQL-----QYEAKLYKILQGGTGIPNL-- 67
+G GS+G + N T VAIK +++ ++ E KL K L+ + L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 68 -----RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 122
RW+ LV + + ++ D L + V Q+IN + F HS +
Sbjct: 93 CKKKKRWY--------LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-------YRDTATHQHIPYRENKNLTGT 175
+HRDIKP+N L+ ++ V + DFG A+ Y D + YR + L G
Sbjct: 145 IIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEVYDDEVATRW--YRAPELLVGD 199
Query: 176 ARYAS 180
+Y
Sbjct: 200 VKYGK 204
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 101/247 (40%), Gaps = 45/247 (18%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEE-----VAIKLNVKTKHPQ----LQYEAK 53
PR N + G+ +G+G+FG++ T +E VA+K+ T H L E K
Sbjct: 29 PR--NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVID------------------LLGPSL------E 89
+ L I NL G VLVI +LGPSL E
Sbjct: 87 IMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 90 DLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 149
L R L L+ +L + Q+ + F+ SK+ +HRD+ N L+ G A I DF
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK---IGDF 202
Query: 150 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRG 208
GLA RD + + N L ++ + + + + D+ S G +L F G
Sbjct: 203 GLA---RDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 257
Query: 209 SLPWQGL 215
P+ G+
Sbjct: 258 LNPYPGI 264
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 3 PRVGNK--FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
P GN+ ++L RK+G G + E++ NI NE V +K+ K +++ E K+ + L+G
Sbjct: 32 PSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRG 91
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--------QMI 112
GT I L ++ V D + + +F + + + +L D +++
Sbjct: 92 GTNIIKL----IDT-----VKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELL 142
Query: 113 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
+++ HSK +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 143 KALDYCHSKGIMHRDVKPHNVM--IDHQQKKLRLIDWGLAEFY 183
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
++F L + +G GSFG+++L I ++ + K L+ ++ ++ +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 67 LRWFGVEGDYNV-------LVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEF 117
F V+ Y L++D L DLF S+++ + V ++ ++
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALALDH 142
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTAR 177
+HS ++RD+KP+N L+ + + DFGL+K ++ H+ Y + GT
Sbjct: 143 LHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSK---ESIDHEKKAY----SFCGTVE 192
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
Y + ++ D S G ++ L G+LP+QG
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 229
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G FGE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 15 MKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 70
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ +S +L +A Q+ + +E++ K+F
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 131 IHRDLAARNCLVG---ENHLVKVADFGLSR 157
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 89 EDLFNFCSRKLSLK-----TVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 143
E+L ++ +R+ SL+ L + Q+ VEF+HSK +HRD+KP N + +
Sbjct: 146 ENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD---DV 202
Query: 144 VYIIDFGLAKRYRDTATHQHI-----PYRENKNLTGTARYASMNTHLGIEQSRRDDLESL 198
V + DFGL Q + Y + GT Y S G S + D+ SL
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSL 262
Query: 199 GYVLMYFL 206
G +L L
Sbjct: 263 GLILFELL 270
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 157
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 158 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 190
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 167 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 199
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K K H + Y E +L K ++ I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 160 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 192
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + + +T VA+K + H + Y E +L K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 70
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + +++ + +L D C+R+ +S +L +A Q+ + +E++ K+F
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 131 IHRDLAARNCLVG---ENHLVKVADFGLSR 157
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 72
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + +++ + +L D C+R+ +S +L +A Q+ + +E++ K+F
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 133 IHRDLAARNCLVG---ENHLVKVADFGLSR 159
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
++F L + +G GSFG+++L I ++ + K L+ ++ ++ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 67 LRWFGVEGDYNV-------LVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEF 117
F V+ Y L++D L DLF S+++ + V ++ ++
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTAR 177
+HS ++RD+KP+N L+ + + DFGL+K ++ H+ Y + GT
Sbjct: 142 LHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSK---ESIDHEKKAY----SFCGTVE 191
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
Y + ++ D S G ++ L G+LP+QG
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 168 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 200
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 16/212 (7%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-----QLQYEAKLYKILQGGTGIPNLRW 69
+G G+ + N+ T++E A+K + K P ++ E ++ QG + L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVK--IIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 70 FGVEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 127
F E D LV + + G L + R + ++ + + ++F+H+K HRD
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
+KP+N L + + V I DF L + I E G+A Y +
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 188 EQS-----RRDDLESLGYVLMYFLRGSLPWQG 214
+ +R DL SLG +L L G P+ G
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 144 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 176
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNLR 68
+ K+G G +GE+Y+G + + VA+K L T + EA + K ++ + L
Sbjct: 36 MKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM-LADQMINRVEFVHSKSFLHRD 127
+E + ++ + +L D C+R+ VL+ +A Q+ + +E++ K+F+HRD
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRD 155
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAK 153
+ N L+G + V + DFGL++
Sbjct: 156 LAARNCLVG---ENHVVKVADFGLSR 178
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNL 67
R +GSG++G + + + ++VA+K + H + Y E +L K L+ I L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 68 RWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 122
F +E V LV L+G L ++ + LS + V L Q++ ++++HS
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
+HRD+KP N + ++ I+DFGLA++ + T
Sbjct: 144 IIHRDLKPSNVAVN---EDCELRILDFGLARQADEEMT 178
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 12 GRKIGSGSFGEIYLGTNIQTNEEVAIK-----LNVKTKHPQLQYEAKLYKILQGG-TGIP 65
G K+G G FG +Y G N VA+K +++ T+ + Q++ ++ + + +
Sbjct: 36 GNKMGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 66 NLRWFGVEGDYNVLV-IDLLGPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKS 122
L F +GD LV + + SL D + + LS +A N + F+H
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRDIK N L+ A I DFGLA+ A+ + + GT Y +
Sbjct: 154 HIHRDIKSANILLD---EAFTAKISDFGLAR-----ASEKFAQTVMXSRIVGTTAYMAPE 205
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G E + + D+ S G VL+ + G LP
Sbjct: 206 ALRG-EITPKSDIYSFGVVLLEIITG-LP 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-----LQYEAKLYKILQGGTGIPNLR 68
K+G G++ +Y G + T+ VA+K ++ +H + E L K L+ +
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALK-EIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI 128
E LV + L L+ + C +++ V + Q++ + + H + LHRD+
Sbjct: 68 IIHTEKSLT-LVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDL 126
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-I 187
KP N L+ ++ + DFGLA+ + IP + N T Y + LG
Sbjct: 127 KPQNLLIN---ERGELKLADFGLARA-------KSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 188 EQSRRDDLESLGYV 201
+ S + D+ +G +
Sbjct: 177 DYSTQIDMWGVGCI 190
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 3 PRVGNK--FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
P GN+ ++L RK+G G + E++ NI NE V +K+ K +++ E K+ + L+G
Sbjct: 37 PSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRG 96
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--------QMI 112
GT I L ++ V D + + +F + + + +L D +++
Sbjct: 97 GTNIIKL----IDT-----VKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELL 147
Query: 113 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
+++ HSK +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 148 KALDYCHSKGIMHRDVKPHNVM--IDHQQKKLRLIDWGLAEFY 188
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ C+ KL+ V L Q++ ++++HS +
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVK-CA-KLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 144 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 176
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQ----YEAKLYKILQGGTGIPN 66
LG +IG G+FGE++ G N VA+K +T P L+ EA++ K PN
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH----PN 173
Query: 67 L-RWFGVEGDYNVLVIDLLGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKS 122
+ R GV + I + D F +L +KT+L + +E++ SK
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
+HRD+ N L+ N + I DFG+++ D
Sbjct: 234 CIHRDLAARNCLV---TEKNVLKISDFGMSREEAD 265
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQ----YEAKLYKILQGGTGIPN 66
LG +IG G+FGE++ G N VA+K +T P L+ EA++ K PN
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK----QYSHPN 173
Query: 67 L-RWFGVEGDYNVLVIDLLGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKS 122
+ R GV + I + D F +L +KT+L + +E++ SK
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
+HRD+ N L+ N + I DFG+++ D
Sbjct: 234 CIHRDLAARNCLV---TEKNVLKISDFGMSREEAD 265
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 12 GRKIGSGSFGEIYLGTNIQTNEEVAIK-----LNVKTKHPQLQYEAKLYKILQGG-TGIP 65
G K+G G FG +Y G N VA+K +++ T+ + Q++ ++ + + +
Sbjct: 30 GNKMGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 66 NLRWFGVEGDYNVLV-IDLLGPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKS 122
L F +GD LV + + SL D + + LS +A N + F+H
Sbjct: 88 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 147
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRDIK N L+ A I DFGLA+ A+ + + GT Y +
Sbjct: 148 HIHRDIKSANILLD---EAFTAKISDFGLAR-----ASEKFAQXVMXXRIVGTTAYMAPE 199
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G E + + D+ S G VL+ + G LP
Sbjct: 200 ALRG-EITPKSDIYSFGVVLLEIITG-LP 226
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 12 GRKIGSGSFGEIYLGTNIQTNEEVAIK-----LNVKTKHPQLQYEAKLYKILQGG-TGIP 65
G K+G G FG +Y G N VA+K +++ T+ + Q++ ++ + + +
Sbjct: 36 GNKMGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 66 NLRWFGVEGDYNVLV-IDLLGPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKS 122
L F +GD LV + + SL D + + LS +A N + F+H
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRDIK N L+ A I DFGLA+ A+ + + GT Y +
Sbjct: 154 HIHRDIKSANILLD---EAFTAKISDFGLAR-----ASEKFAQTVMXXRIVGTTAYMAPE 205
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G E + + D+ S G VL+ + G LP
Sbjct: 206 ALRG-EITPKSDIYSFGVVLLEIITG-LP 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + +++ I+DFGLA+ D T
Sbjct: 154 HRDLKPSNLAVN---EDSELKILDFGLARHTDDEMT 186
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + +++ I+DFGLA+ D T
Sbjct: 150 HRDLKPSNLAVN---EDSELKILDFGLARHTDDEMT 182
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ S+KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--SQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + +++ I+DFGL + D T
Sbjct: 148 HRDLKPSNLAVN---EDSELKILDFGLCRHTDDEMT 180
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 66 VKLLDVIHTENKLY-LVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP+N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 125 VLHRDLKPENLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 174
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIF 195
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
IGSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 153 HRDLKPSNLAVN---EDXELKILDFGLARHTDDEMT 185
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 68 VKLLDVIHTENKLY-LVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP+N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 127 VLHRDLKPENLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 176
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIF 197
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 69 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 128 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 178 YAS 180
Y++
Sbjct: 185 YST 187
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFG 71
+IG GSFGE++ G + +T + VAIK ++++ +++ + +L +++G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 72 --VEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 127
++G ++++ L G +L+ L + + T+L +++ ++++HS+ +HRD
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATML---KEILKGLDYLHSEKKIHRD 145
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
IK N L+ V + DFG+A + DT ++ GT + + I
Sbjct: 146 IKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRN-------TFVGTPFWMAPEV---I 192
Query: 188 EQSRRD---DLESLGYVLMYFLRGSLP 211
+QS D D+ SLG + +G P
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 124 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 178 YAS 180
Y++
Sbjct: 181 YST 183
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 23/219 (10%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-------LNVKTKHPQLQYEAKLYKILQGG 61
FR+ +KIG G F E+Y + VA+K ++ K + ++ E L K L
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK-EIDLLKQLNHP 92
Query: 62 TGIPNLRWFGVEGDYNVLVIDLLGPSLEDL---FNFCSRKLSLKTVLMLADQMINRVEFV 118
I F + + N+++ L + F R + +TV Q+ + +E +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 119 HSKSFLHRDIKPDN-FLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTAR 177
HS+ +HRDIKP N F+ G V + D GL + + T H +L GT
Sbjct: 153 HSRRVMHRDIKPANVFITATG----VVKLGDLGLGRFFSSKTTAAH-------SLVGTPY 201
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 216
Y S + + D+ SLG +L P+ G K
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 240
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVA---IKLNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA I+L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 124 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 178 YAS 180
Y++
Sbjct: 181 YST 183
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVA---IKLNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA I+L+ +T+ P E L K L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 64 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 123 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 178 YAS 180
Y++
Sbjct: 180 YST 182
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 66 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP+N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 125 VLHRDLKPENLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 174
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIF 195
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + + +T VA+K + H + Y E +L K +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 142
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 186
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 66 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 125 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 178 YAS 180
Y++
Sbjct: 182 YST 184
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 67 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP+N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 126 VLHRDLKPENLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 175
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIF 196
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 64 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 123 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 178 YAS 180
Y++
Sbjct: 180 YST 182
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 124 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 178 YAS 180
Y++
Sbjct: 181 YST 183
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 64 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 123 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 178 YAS 180
Y++
Sbjct: 180 YST 182
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 120
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 178
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 179 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGATW----------TLCGTPEY 225
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 226 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 257
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 38/238 (15%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEE-VAIKLNVKT----KHPQLQYEAKLYKIL 58
R +++L ++G G+F + + +E A+ +N K H +L+ EA++ ++L
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 59 QGGTGIPNLRWFGVEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ I L E ++ L+ DL+ G ED+ S Q++ V
Sbjct: 68 KH-PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV--AREYYSEADASHCIQQILEAVL 124
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
H +HR++KP+N L+ + V + DFGLA E + G
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG----------EQQAWFG-- 172
Query: 177 RYASMNTHLGIEQSRRD------DLESLGYVLMYFLRGSLP---------WQGLKAGT 219
+A +L E R+D DL + G +L L G P +Q +KAG
Sbjct: 173 -FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGA 229
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 124 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 178 YAS 180
Y++
Sbjct: 181 YST 183
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 13 RKIGSGSFGEIYLGTNI---QTNEEVAIKLNVKTKHPQLQYEAKLYK-ILQGGTGIPN-L 67
R IG G FG +Y G I Q + AIK + Q Q EA L + +L G PN L
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ-QVEAFLREGLLMRGLNHPNVL 85
Query: 68 RWFGV----EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
G+ EG +VL+ + L R ++K ++ Q+ +E++ + F
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF 145
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT 183
+HRD+ N ++ + V + DFGLA RD ++ +++++ ++ ++ +
Sbjct: 146 VHRDLAARNCMLD---ESFTVKVADFGLA---RDILDREYYSVQQHRHARLPVKWTALES 199
Query: 184 HLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGL 215
+ + D+ S G +L L RG+ P++ +
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 144
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTADEMT 187
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 77
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ +S +L +A Q+ + +E++ K+F
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 138 IHRDLAARNCLVG---ENHLVKVADFGLSR 164
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKILQ--G 60
+ N F + RK+G G+FG + L +I + A+K+ N+K + EA + K +Q
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDD 92
Query: 61 GTGIPNLRWFG--VEGDYNVLVIDLLGPSLEDLF---NFCSRKLSLKTVLMLADQMINRV 115
+++ G + D+ L+ + LGPSL ++ N+ ++ + + +++ +
Sbjct: 93 INNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNY--NGFHIEDIKLYCIEILKAL 150
Query: 116 EFVHSKSFLHRDIKPDNFLMG---------LGRRAN-----QVY--------IIDFGLAK 153
++ S H D+KP+N L+ RR Q+Y +IDFG A
Sbjct: 151 NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT 210
Query: 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSL 210
D + ++ T +Y + L + D+ S G VL GSL
Sbjct: 211 FKSDY----------HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 29/223 (13%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAK-LYKILQ 59
++ R G F+ IGSG FG+++ + + IK VK + + + E K L K+
Sbjct: 5 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIK-RVKYNNEKAEREVKALAKLDH 63
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLF---NFCSR-------------KLSLKT 103
N W G + D + + LF FC + KL
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 104 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163
L L +Q+ V+++HSK ++RD+KP N + QV I DFGL ++
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFL---VDTKQVKIGDFGLVTSLKNDGKRXR 180
Query: 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFL 206
GT RY S + + DL +LG +L L
Sbjct: 181 SK--------GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-----LNVKTKHPQLQYEAKLYKILQ 59
V K+ L +K+G G++G ++ + +T E VA+K T + E + L
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 60 GGTGIPNL-RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTV--LMLADQMINRV 115
G I NL + D +V LV D + L + R L+ V + Q+I +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI----RANILEPVHKQYVVYQLIKVI 122
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT-ATHQHIPYRENKN 171
+++HS LHRD+KP N L+ V + DFGL++ + + +IP N+N
Sbjct: 123 KYLHSGGLLHRDMKPSNILLN---AECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 144
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTADEMT 187
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 72
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ +S +L +A Q+ + +E++ K+F
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 133 IHRDLAARNCLVG---ENHLVKVADFGLSR 159
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 144
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTADEMT 187
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 142
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHTDDEMT 185
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 154 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 186
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 159 HRDLKPSNLAVN---EDXELKILDFGLARHTDDEMT 191
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + + +T VA+K + H + Y E +L K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + + +T VA+K + H + Y E +L K +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 143
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 187
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 150 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 182
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQLQYEAKL-------YKILQGG 61
KIG GSFGE++ G + +T + VAIK+ + + +Q E + Y G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 62 TGIPNLR-WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
+ + + + W +E +DLL P D + + T+L +++ ++++HS
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILR---EILKGLDYLHS 122
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
+ +HRDIK N L+ +V + DFG+A + DT ++ GT + +
Sbjct: 123 EKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRN-------TFVGTPFWMA 172
Query: 181 MNTHLGIEQSRRD---DLESLGYVLMYFLRGSLP 211
I+QS D D+ SLG + RG P
Sbjct: 173 PEV---IKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 142
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 185
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 150 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 182
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 168 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 200
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 19 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 78
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 79 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 136
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 179
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ-- 59
EP ++ L RK+G G F ++L ++ N VA+K+ V+ + K+LQ
Sbjct: 14 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKI-VRGDKVYTEAAEDEIKLLQRV 72
Query: 60 -----------GGTGIPNL----RWFGVEGDYNVLVIDLLGPSLEDLF-NFCSRKLSLKT 103
G I L G G + V+V ++LG +L L + R + L
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 104 VLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRAN---QVYIIDFGLAKRYRDTA 159
V ++ Q++ ++++H + +H DIKP+N LM + Q+ I D G A Y +
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 160 TH--QHIPYRENKNLTGT 175
T+ Q YR + L G
Sbjct: 193 TNSIQTREYRSPEVLLGA 210
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ-- 59
EP ++ L RK+G G F ++L ++ N VA+K+ V+ + K+LQ
Sbjct: 14 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKI-VRGDKVYTEAAEDEIKLLQRV 72
Query: 60 -----------GGTGIPNL----RWFGVEGDYNVLVIDLLGPSLEDLF-NFCSRKLSLKT 103
G I L G G + V+V ++LG +L L + R + L
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 104 VLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRAN---QVYIIDFGLAKRYRDTA 159
V ++ Q++ ++++H + +H DIKP+N LM + Q+ I D G A Y +
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 160 TH--QHIPYRENKNLTGT 175
T+ Q YR + L G
Sbjct: 193 TNSIQTREYRSPEVLLGA 210
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIP 65
+++ L + IG+G+FG L + Q NE VA+K + + ++ K I P
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE--KIDENVKREIINHRSLRHP 75
Query: 66 NL-RWFGVEGDYNVLVIDLLGPSLEDLFN-FCSR-KLSLKTVLMLADQMINRVEFVHSKS 122
N+ R+ V L I + S +LF C+ + S Q+I+ V + H+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
HRD+K +N L+ G A ++ I DFG +K + + + K+ GT Y +
Sbjct: 136 VAHRDLKLENTLLD-GSPAPRLKIADFGYSK--------ASVLHSQPKSAVGTPAYIAPE 186
Query: 183 THLGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 213
L E + D+ S G L L G+ P++
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + + +T VA+K + H + Y E +L K +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 138
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 182
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 137
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEE-----VAIKLNVKTKHPQ----LQYEAK 53
PR N + G+ +G+G+FG++ T +E VA+K+ T H L E K
Sbjct: 44 PR--NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--------------- 98
+ L I NL G +++ + DL NF RK
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYC--CYGDLLNFLRRKRPPGLEYSYNPSHNP 159
Query: 99 ---LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
LS + +L + Q+ + F+ SK+ +HRD+ N L+ G A I DFGLA+
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK---IGDFGLAR 214
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 167 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 199
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 160 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 192
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + + +T VA+K + H + Y E +L K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 160 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 192
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR---WF 70
++G GSFGE++ + QT + A+K +++ E + L G+ + R +
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLY 116
Query: 71 GV--EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 127
G EG + + ++LL G SL L L L Q + +E++H++ LH D
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGD 175
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
+K DN L L ++ + DFG A + + + + GT + + +G
Sbjct: 176 VKADNVL--LSSDGSRAALCDFGHALCLQPDGLGKSL--LTGDYIPGTETHMAPEVVMGK 231
Query: 188 EQSRRDDLESLGYVLMYFLRGSLPW 212
+ D+ S ++++ L G PW
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 124 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 178 YAS 180
Y++
Sbjct: 181 YST 183
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+++ L + IGSG+FG L + Q+NE VA+K + + ++ K I PN
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE--KIDENVKREIINHRSLRHPN 76
Query: 67 L-RWFGVEGDYNVLVIDLLGPSLEDLFN-FCSR-KLSLKTVLMLADQMINRVEFVHSKSF 123
+ R+ V L I + S +LF C+ + S Q+I+ V + H+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT 183
HRD+K +N L+ G A ++ I FG +K + + + K+ GT Y +
Sbjct: 137 CHRDLKLENTLLD-GSPAPRLKICAFGYSK--------SSVLHSQPKDTVGTPAYIAPEV 187
Query: 184 HLGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 213
L E + D+ S G L L G+ P++
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 159 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 191
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 70
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ +S +L +A Q+ + +E++ K+F
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 131 IHRDLAARNCLVG---ENHLVKVADFGLSR 157
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 145
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 146 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 178
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 153 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 185
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 145 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 177
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 72
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ +S +L +A Q+ + +E++ K+F
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 133 IHRDLAARNCLVG---ENHLVKVADFGLSR 159
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQLQYEAKL-------YKILQGG 61
KIG GSFGE++ G + +T + VAIK+ + + +Q E + Y G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 62 TGIPNLR-WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
+ + + + W +E +DLL P D + + T+L +++ ++++HS
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILR---EILKGLDYLHS 137
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
+ +HRDIK N L+ +V + DFG+A + DT ++ GT + +
Sbjct: 138 EKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRN-------XFVGTPFWMA 187
Query: 181 MNTHLGIEQSRRD---DLESLGYVLMYFLRGSLP 211
I+QS D D+ SLG + RG P
Sbjct: 188 PEV---IKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV- 72
++G G+FG++Y N +T A K+ +L+ +IL ++ G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 73 --EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
+G +++ G +++ + R L+ + ++ QM+ + F+HSK +HRD+K
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 131 DNFLMGLGRRANQVYIIDFGLAKR 154
N LM L + + DFG++ +
Sbjct: 146 GNVLMTL---EGDIRLADFGVSAK 166
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 171 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 203
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 145 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 177
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 9 FRLGRKIGSGSFGEIYLGTNI---QTNEEVAIK-LNVKTKHPQLQYEAKLYKILQGGTGI 64
F L + +G GSFG+++L + + A+K L T + + K+ + +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 65 P---NLRW-FGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFV 118
P L + F EG L++D L DLF S+++ + V ++ ++ +
Sbjct: 90 PFVVKLHYAFQTEGKL-YLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + DFGL+K D H+ Y + GT Y
Sbjct: 147 HSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKEAID---HEKKAY----SFCGTVEY 196
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ S D S G ++ L GSLP+QG
Sbjct: 197 MAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQG 232
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 26/205 (12%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTH 184
HRD+KP N + ++ I+DFGLA+ D E T Y +
Sbjct: 144 HRDLKPSNLAVN---EDCELKILDFGLARHTDD----------EMAGFVATRWYRAPEIM 190
Query: 185 LG-IEQSRRDDLESLGYVLMYFLRG 208
L + ++ D+ S+G ++ L G
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
HRD+KP N + ++ I+DFGLA+ D
Sbjct: 168 HRDLKPSNLAVN---EDCELKILDFGLARHTDD 197
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 144 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 176
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 114
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 175 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 206
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+VA+K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N L+ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVLIDHEHR--KLRLIDWGLAEFY 182
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 118
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 179 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 77
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + +++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 138 IHRDLAARNCLVG---ENHLVKVADFGLSR 164
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + + +T VA+K + H + Y E +L K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
++++HS +HRD+KP N + ++ I+DFGLA+ D
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDD 177
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 159
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 220 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 251
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQLQYEAKL-------YKILQGG 61
KIG GSFGE++ G + +T + VAIK+ + + +Q E + Y G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 62 TGIPNLR-WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
+ + + + W +E +DLL P D + + T+L +++ ++++HS
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILR---EILKGLDYLHS 122
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
+ +HRDIK N L+ +V + DFG+A + DT ++ GT + +
Sbjct: 123 EKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRN-------XFVGTPFWMA 172
Query: 181 MNTHLGIEQSRRD---DLESLGYVLMYFLRGSLP 211
I+QS D D+ SLG + RG P
Sbjct: 173 PEV---IKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
HRD+KP N + ++ I+DFGLA+ D
Sbjct: 148 HRDLKPSNLAVN---EDCELKILDFGLARHTDD 177
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 67 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 126 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 175
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIF 196
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 64 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 123 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 172
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIF 193
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 116
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 177 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 208
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+++ L + IGSG+FG L + Q+NE VA+K + + ++ K I PN
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE--KIDENVKREIINHRSLRHPN 76
Query: 67 L-RWFGVEGDYNVLVIDLLGPSLEDLFN-FCSR-KLSLKTVLMLADQMINRVEFVHSKSF 123
+ R+ V L I + S +LF C+ + S Q+I+ V + H+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT 183
HRD+K +N L+ G A ++ I FG +K + + + K+ GT Y +
Sbjct: 137 CHRDLKLENTLLD-GSPAPRLKICAFGYSK--------SSVLHSQPKSTVGTPAYIAPEV 187
Query: 184 HLGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 213
L E + D+ S G L L G+ P++
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--XQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDXELKILDFGLARHTDDEMT 180
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 108
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 169 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 200
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
KIG GS G + L + +VA+K L + + L E + + Q + + +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 71 GVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
V + VL+ L G +L D+ + +L+ + + + + ++ + ++H++ +HRDIK
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVS--QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKS 169
Query: 131 DNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS 190
D+ L+ L R V + DFG + + +P R K L GT + + +
Sbjct: 170 DSILLTLDGR---VKLSDFGFCAQ-----ISKDVPKR--KXLVGTPYWMAPEVISRSLYA 219
Query: 191 RRDDLESLGYVLMYFLRGSLPW 212
D+ SLG +++ + G P+
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPY 241
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 124 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 173
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIF 194
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR---WF 70
++G GSFGE++ + QT + A+K +++ E + L G+ + R +
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLY 132
Query: 71 GV--EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 127
G EG + + ++LL G SL L L L Q + +E++H++ LH D
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGD 191
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
+K DN L L ++ + DFG A + + + + GT + + +G
Sbjct: 192 VKADNVL--LSSDGSRAALCDFGHALCLQPDGLGKSL--LTGDYIPGTETHMAPEVVMGK 247
Query: 188 EQSRRDDLESLGYVLMYFLRGSLPW 212
+ D+ S ++++ L G PW
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
V + + + IG GS+G +YL + T + VAI K + + +IL+ T +
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAI----KKVNRMFEDLIDCKRILREITIL 79
Query: 65 PNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL-----------KTVLMLADQMIN 113
L+ DY + + DL+ P +DL F + L KT + L ++ I
Sbjct: 80 NRLK-----SDYIIRLYDLIIP--DDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIK 132
Query: 114 RV--------EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ F+H +HRD+KP N L+ + V + DFGLA+
Sbjct: 133 TILYNLLLGENFIHESGIIHRDLKPANCLLN---QDCSVKVCDFGLAR 177
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV- 72
++G G+FG++Y N +T A K+ +L+ +IL ++ G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 73 --EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
+G +++ G +++ + R L+ + ++ QM+ + F+HSK +HRD+K
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 131 DNFLMGLGRRANQVYIIDFGLAKR 154
N LM L + + DFG++ +
Sbjct: 138 GNVLMTL---EGDIRLADFGVSAK 158
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 12 GRKIGSGSFGEIYLGTNIQTNEEVAIK-----LNVKTKHPQLQY--EAKLYKILQGGTGI 64
G K G G FG +Y G N VA+K +++ T+ + Q+ E K+ Q +
Sbjct: 27 GNKXGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQH-ENL 83
Query: 65 PNLRWFGVEGDYNVLVIDLLGP--SLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS 120
L F +GD ++ ++ + P SL D + + LS +A N + F+H
Sbjct: 84 VELLGFSSDGD-DLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHE 142
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
+HRDIK N L+ A I DFGLA+ A+ + + GT Y +
Sbjct: 143 NHHIHRDIKSANILLD---EAFTAKISDFGLAR-----ASEKFAQXVXXSRIVGTTAYXA 194
Query: 181 MNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G E + + D+ S G VL+ + G LP
Sbjct: 195 PEALRG-EITPKSDIYSFGVVLLEIITG-LP 223
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQLQYEAKL-------YKILQGG 61
KIG GSFGE++ G + +T + VAIK+ + + +Q E + Y G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 62 TGIPNLR-WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
+ + + + W +E +DLL P D + + T+L +++ ++++HS
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILR---EILKGLDYLHS 142
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
+ +HRDIK N L+ +V + DFG+A + DT ++ GT + +
Sbjct: 143 EKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRN-------TFVGTPFWMA 192
Query: 181 MNTHLGIEQSRRD---DLESLGYVLMYFLRGSLP 211
I+QS D D+ SLG + RG P
Sbjct: 193 PEV---IKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 73
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + +++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 134 IHRDLAARNCLVG---ENHLVKVADFGLSR 160
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 124 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 173
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIF 194
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 114
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 175 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 66 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 125 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYRAPE 174
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIF 195
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 124 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 173
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIF 194
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
Query: 76 YNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHRDIKPDNF 133
+ LV DL+ +LF++ + K++L K + ++ V F+H+ + +HRD+KP+N
Sbjct: 174 FMFLVFDLMRKG--ELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENI 231
Query: 134 LMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY-------ASMN-THL 185
L+ Q+ + DFG + P + + L GT Y SM+ TH
Sbjct: 232 LLD---DNMQIRLSDFGFSCHLE--------PGEKLRELCGTPGYLAPEILKCSMDETHP 280
Query: 186 GIEQSRRDDLESLGYVLMYFLRGSLPW 212
G + DL + G +L L GS P+
Sbjct: 281 GY--GKEVDLWACGVILFTLLAGSPPF 305
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--XQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+DFGLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIK----LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
+G G++G +Y G ++ +AIK + + P L E L+K L+ + L F
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-LHEEIALHKHLKHKNIVQYLGSF 88
Query: 71 GVEGDYNVLVIDLLGPSLEDLF--NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI 128
G + + + G SL L + K + +T+ Q++ ++++H +HRDI
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE 188
K DN L + + + I DFG +KR P E TGT +Y + I+
Sbjct: 149 KGDNVL--INTYSGVLKISDFGTSKRLAGIN-----PCTE--TFTGTLQYMAPEI---ID 196
Query: 189 QSRRD-----DLESLGYVLMYFLRGSLPWQGL 215
+ R D+ SLG ++ G P+ L
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 69 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 128 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 177
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIF 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 64 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 123 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 172
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIF 193
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 68 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 127 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 176
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIF 197
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 67 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 126 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 175
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIF 196
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 93
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 154 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 185
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 38/239 (15%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEE-----VAIKLNVKTKHPQ----LQYEAK 53
PR N + G+ +G+G+FG++ T +E VA+K+ T H L E K
Sbjct: 44 PR--NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--------------- 98
+ L I NL G +++ + DL NF RK
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYC--CYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 99 -LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
S + +L + Q+ + F+ SK+ +HRD+ N L+ G A I DFGLA RD
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK---IGDFGLA---RD 213
Query: 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 215
+ + N L ++ + + + + D+ S G +L F G P+ G+
Sbjct: 214 IMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 279
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ +S +L +A Q+ + +E++ K+F
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HR++ N L+G + V + DFGL++
Sbjct: 340 IHRNLAARNCLVG---ENHLVKVADFGLSR 366
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 65 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 124 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 173
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIF 194
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 85
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 146 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 177
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR---WF 70
++G GSFGE++ + QT + A+K +++ E + L G+ + R +
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLY 130
Query: 71 GV--EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 127
G EG + + ++LL G SL L L L Q + +E++H++ LH D
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGD 189
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
+K DN L L ++ + DFG A + + + + GT + + +G
Sbjct: 190 VKADNVL--LSSDGSRAALCDFGHALCLQPDGLGKSL--LTGDYIPGTETHMAPEVVMGK 245
Query: 188 EQSRRDDLESLGYVLMYFLRGSLPW 212
+ D+ S ++++ L G PW
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 100
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 159 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 205
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 206 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 237
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 68 VKLLDVIHTENKL-YLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 127 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 176
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIF 197
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 68 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 127 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 176
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIF 197
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYE-AKLYKILQGGTGIPNLRW 69
+G+G+F E+ L + +T + VAIK K K ++ E A L+KI I L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH--PNIVALDD 83
Query: 70 FGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRD 127
G + L++ L+ S +LF+ K + + L Q+++ V+++H +HRD
Sbjct: 84 IYESGGHLYLIMQLV--SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
+KP+N L +++ I DFGL+K P GT Y +
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSK--------MEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 188 EQSRRDDLESLGYVLMYFLRGSLPW 212
S+ D S+G + L G P+
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + L L+ + + + L + Q++ + F HS
Sbjct: 66 VKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 125 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 174
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIF 195
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYQMAAGYP 236
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLAGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 99
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 160 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 191
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYK-----ILQGGTG 63
F + + IG G+FGE+ + ++ A+K+ K + + + E ++ ++ G +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-RAETACFREERDVLVNGDSK 134
Query: 64 IPNLRWFGVEGDYNV-LVIDL-LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
+ + D N+ LV+D +G L L + +L + +M+ ++ VH
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
++HRDIKPDN LM + + + DFG + + T Q + GT Y S
Sbjct: 195 HYVHRDIKPDNILMDMN---GHIRLADFGSCLKLMEDGTVQ------SSVAVGTPDYISP 245
Query: 182 NTHLGIEQSR-----RDDLESLGYVLMYFLRGSLPW 212
+E + D SLG + L G P+
Sbjct: 246 EILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 88
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 149 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 180
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 92
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 153 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 184
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIK----LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
+G G++G +Y G ++ +AIK + + P L E L+K L+ + L F
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-LHEEIALHKHLKHKNIVQYLGSF 74
Query: 71 GVEGDYNVLVIDLLGPSLEDLF--NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI 128
G + + + G SL L + K + +T+ Q++ ++++H +HRDI
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE 188
K DN L + + + I DFG +KR P E TGT +Y + I+
Sbjct: 135 KGDNVL--INTYSGVLKISDFGTSKRLAGIN-----PCTE--TFTGTLQYMAPEI---ID 182
Query: 189 QSRRD-----DLESLGYVLMYFLRGSLPWQGL 215
+ R D+ SLG ++ G P+ L
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 214
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 92
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 153 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 184
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQLQY-EAKLYKILQGG 61
+K+ KIG G+FGE++ + +T ++VA+K N K P E K+ ++L+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 62 TGIPNLRWFGVEGD-YN------VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ + + YN LV D L L + K +L + + ++N
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
+ ++H LHRD+K N L+ R + + DFGLA+ +
Sbjct: 138 LYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAF 175
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 10/164 (6%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGT 62
+ R + +GSG+FG +Y G I E V I + +K P+ E + G
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
G P + R G+ V ++ L P L D +L + +L Q+ + ++
Sbjct: 77 GSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE 136
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163
+HRD+ N L+ + N V I DFGLA+ T H
Sbjct: 137 DVRLVHRDLAARNVLV---KSPNHVKITDFGLARLLDIDETEYH 177
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 80
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 141 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 172
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 80
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 141 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 172
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLXGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 80
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 141 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 172
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 84
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 145 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 176
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 80
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 141 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 172
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-----DHCNIVRLRY 81
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 142 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 173
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL-----DHCNIVRLRY 80
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 141 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 172
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL-----DHCNIVRLRY 80
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 141 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 172
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
HRD+KP N + ++ I+DFGLA+ D
Sbjct: 171 HRDLKPSNLAVN---EDCELKILDFGLARHTDD 200
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYM-SPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQ 67
Query: 65 ---PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEF 117
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + +
Sbjct: 68 FDHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162
+ SK F+HRDI N L+ + V + DFGL++ D+ ++
Sbjct: 127 LESKRFVHRDIAARNVLVS---ATDCVKLGDFGLSRYMEDSTYYK 168
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPAIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 137
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+D+GLA+ D T
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN---EDCELKILDYGLARHTDDEMT 180
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 86
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 144
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + DFG AKR + L GT Y
Sbjct: 145 HSLDLIYRDLKPENLLID---EQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 191
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 192 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW 69
+ IG+GSFG +Y + E VAIK ++ K + +LQ KL I LR+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL-----DHCNIVRLRY 80
Query: 70 F----GVEGD--YNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHS 120
F G + D Y LV+D + ++ + SR L + V + Q+ + ++HS
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
HRDIKP N L L + + DFG AK+
Sbjct: 141 FGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 172
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA--THQHIPYRENKNL 172
++F+HS + HRD+KP+N L + + + DFG AK A T + PY +
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEV 200
Query: 173 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G +Y + D+ SLG V+MY L P
Sbjct: 201 LGPEKY-----------DKSCDMWSLG-VIMYILLCGFP 227
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 77
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 138 IHRDLAARNCLVG---ENHLVKVADFGLSR 164
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVA---IKLNVKTKHPQLQY-EAKLYKILQGGT 62
++F+ K+G+G++ +Y G N T VA +KL+ + P E L K L+
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 63 GIPNLRWFGVEGDYN--VLVIDLLGPSLEDLFNF-----CSRKLSLKTVLMLADQMINRV 115
+ R + V N LV + + L+ + R L L V Q++ +
Sbjct: 65 IV---RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
F H LHRD+KP N L+ + Q+ + DFGLA+ +
Sbjct: 122 AFCHENKILHRDLKPQNLLIN---KRGQLKLGDFGLARAF 158
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 77
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 138 IHRDLAARNCLVG---ENHLVKVADFGLSR 164
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA--THQHIPYRENKNL 172
++F+HS + HRD+KP+N L + + + DFG AK A T + PY +
Sbjct: 122 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEV 181
Query: 173 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G +Y + D+ SLG V+MY L P
Sbjct: 182 LGPEKY-----------DKSCDMWSLG-VIMYILLCGFP 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 74
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 135 IHRDLAARNCLVG---ENHLVKVADFGLSR 161
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 74
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 135 IHRDLAARNCLVG---ENHLVKVADFGLSR 161
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQLQYEAKLYKILQGGTGIPNL 67
F + K+G GS+G +Y + +T + VAIK + V++ LQ K I+Q +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVV 87
Query: 68 RWFG--VEGDYNVLVIDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
+++G + +V++ G S+ D+ ++ L+ + + + +E++H +
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTH 184
HRDIK N L+ A + DFG+A + D ++ + GT + +
Sbjct: 148 HRDIKAGNILLNTEGHAK---LADFGVAGQLTDXMAKRN-------XVIGTPFWMAPEVI 197
Query: 185 LGIEQSRRDDLESLGYVLMYFLRGSLPW 212
I + D+ SLG + G P+
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTGIP 65
F++ R +G+GSFG ++L + A+K+ + + Q+++ +L T
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKSF 123
+R +G D + + + +LF+ S++ A ++ +E++HSK
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT 183
++RD+KP+N L+ + + I DFG AK D L GT Y +
Sbjct: 128 IYRDLKPENILLD---KNGHIKITDFGFAKYVPDVTY----------XLCGTPDYIAPEV 174
Query: 184 HLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
++ D S G ++ L G P+
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYE-AKLYKILQGGTGIPNLRW 69
+G+G+F E+ L + +T + VAIK K K ++ E A L+KI I L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH--PNIVALDD 83
Query: 70 FGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRD 127
G + L++ L+ +LF+ K + + L Q+++ V+++H +HRD
Sbjct: 84 IYESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
+KP+N L +++ I DFGL+K P GT Y +
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSK--------MEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 188 EQSRRDDLESLGYVLMYFLRGSLPW 212
S+ D S+G + L G P+
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQLQY-EAKLYKILQGG 61
+K+ KIG G+FGE++ + +T ++VA+K N K P E K+ ++L+
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 62 TGIPNLRWFGVEGD-YN------VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ + + YN LV D L L + K +L + + ++N
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 136
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
+ ++H LHRD+K N L+ R + + DFGLA+ +
Sbjct: 137 LYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAF 174
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 77
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 138 IHRDLAARNCLVG---ENHLVKVADFGLSR 164
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYM-SPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQF 96
Query: 65 --PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFV 118
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + ++
Sbjct: 97 DHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 155
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162
SK F+HRDI N L+ + V + DFGL++ D+ ++
Sbjct: 156 ESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYK 196
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYM-SPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ 72
Query: 65 ---PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEF 117
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + +
Sbjct: 73 FDHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162
+ SK F+HRDI N L+ + V + DFGL++ D+ ++
Sbjct: 132 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYK 173
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYM-SPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ 69
Query: 65 ---PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEF 117
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + +
Sbjct: 70 FDHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 128
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162
+ SK F+HRDI N L+ + V + DFGL++ D+ ++
Sbjct: 129 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYK 170
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYE-AKLYKILQGGTGIPNLRW 69
+G+G+F E+ L + +T + VAIK K K ++ E A L+KI I L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH--PNIVALDD 83
Query: 70 FGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRD 127
G + L++ L+ +LF+ K + + L Q+++ V+++H +HRD
Sbjct: 84 IYESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
+KP+N L +++ I DFGL+K P GT Y +
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSK--------MEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 188 EQSRRDDLESLGYVLMYFLRGSLPW 212
S+ D S+G + L G P+
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 54 LYKILQGGTGIPNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLA--DQ 110
L K+ G +G+ L WF D VL+++ P ++DLF+F + + +L+ L + Q
Sbjct: 108 LKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQ 165
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
++ V H+ LHRDIK +N L+ L R ++ +IDFG +DT
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTV 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 73
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 134 IHRDLAARNCLVG---ENHLVKVADFGLSR 160
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 21 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 76
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 137 IHRDLAARNCLVG---ENHLVKVADFGLSR 163
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 72
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 133 IHRDLAARNCLVG---ENHLVKVADFGLSR 159
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQLQY-EAKLYKILQGG 61
+K+ KIG G+FGE++ + +T ++VA+K N K P E K+ ++L+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 62 TGIPNLRWFGVEGD-YN------VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ + + YN LV D L L + K +L + + ++N
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
+ ++H LHRD+K N L+ R + + DFGLA+ +
Sbjct: 138 LYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAF 175
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 72
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 133 IHRDLAARNCLVG---ENHLVKVADFGLSR 159
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 74
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 135 IHRDLAARNCLVG---ENHLVKVADFGLSR 161
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 17/209 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIP 65
F +GSG+F E++L T + A+K K+ + L+ E + K ++ I
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH-ENIV 69
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSF 123
L + LV+ L+ +LF+ + + K ++ Q+++ V+++H
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGG--ELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNT 183
+HRD+KP+N L +++ I DFGL+K ++ GT Y +
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM---------STACGTPGYVAPEV 178
Query: 184 HLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
S+ D S+G + L G P+
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH--PQLQYEAKLYKILQGGTG-- 63
++ + RK+G G F ++L ++Q VA+K+ +H E KL K ++
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSD 91
Query: 64 ---------IPNLRWFGVEGDYNVLVIDLLGPS-LEDLFNFCSRKLSLKTVLMLADQMIN 113
I + + G+ G + +V ++LG L+ + + L ++ V + Q++
Sbjct: 92 PNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQ 151
Query: 114 RVEFVHSKS-FLHRDIKPDNFLMGL 137
++++HSK +H DIKP+N LM +
Sbjct: 152 GLDYLHSKCKIIHTDIKPENILMCV 176
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQLQY-EAKLYKILQGG 61
+K+ KIG G+FGE++ + +T ++VA+K N K P E K+ ++L+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 62 TGIPNLRWFGVEGD-YN------VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ + + YN LV D L L + K +L + + ++N
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
+ ++H LHRD+K N L+ R + + DFGLA+ +
Sbjct: 138 LYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAF 175
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYM-SPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ 67
Query: 65 ---PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEF 117
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + +
Sbjct: 68 FDHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162
+ SK F+HRDI N L+ + V + DFGL++ D+ ++
Sbjct: 127 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYK 168
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 30 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 85
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+G + V + DFGL++
Sbjct: 146 IHRDLAARNCLVG---ENHLVKVADFGLSR 172
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYM-SPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQF 448
Query: 65 --PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFV 118
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + ++
Sbjct: 449 DHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 507
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161
SK F+HRDI N L+ + V + DFGL+ RY + +T+
Sbjct: 508 ESKRFVHRDIAARNVLVS---ATDCVKLGDFGLS-RYMEDSTY 546
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + + A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFAEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ---------LQYEAKLYKILQGGTGIP 65
+G G F +Y + TN+ VAIK +K H E KL + L I
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIK-KIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 66 NLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L FG + + + LV D + LE + S L+ + + +E++H LH
Sbjct: 77 LLDAFGHKSNIS-LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP+N L+ + + DFGLAK +
Sbjct: 136 RDLKPNNLLLD---ENGVLKLADFGLAKSF 162
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYM-SPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ 70
Query: 65 ---PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEF 117
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + +
Sbjct: 71 FDHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 129
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162
+ SK F+HRDI N L+ + V + DFGL++ D+ ++
Sbjct: 130 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYK 171
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYM-SPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQ 64
Query: 65 ---PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEF 117
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + +
Sbjct: 65 FDHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162
+ SK F+HRDI N L+ + V + DFGL++ D+ ++
Sbjct: 124 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYK 165
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYE-AKLYKILQGGTGIPNLRW 69
+G+G+F E+ L + +T + VAIK K K ++ E A L+KI I L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH--PNIVALDD 83
Query: 70 FGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRD 127
G + L++ L+ S +LF+ K + + L Q+++ V+++H +HRD
Sbjct: 84 IYESGGHLYLIMQLV--SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 128 IKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI 187
+KP+N L +++ I DFGL+K P GT Y +
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSK--------MEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 188 EQSRRDDLESLGYVLMYFLRGSLPW 212
S+ D S+G + L G P+
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 11/109 (10%)
Query: 98 KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
KL L L +Q+ V+++HSK +HRD+KP N + QV I DFGL ++
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL---VDTKQVKIGDFGLVTSLKN 188
Query: 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFL 206
GT RY S + + DL +LG +L L
Sbjct: 189 DGKRTRSK--------GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYM-SPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQ 67
Query: 65 ---PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEF 117
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + +
Sbjct: 68 FDHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162
+ SK F+HRDI N L+ + V + DFGL++ D+ ++
Sbjct: 127 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYK 168
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 36/220 (16%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
+G G FG ++ N + AIK ++ + +L E K+++ + L G+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIK-RIRLPNRELARE----KVMREVKALAKLEHPGIVR 67
Query: 75 DYNVLV----IDLLGPSLEDLFNFCSRKLSLK-------------------TVLMLADQM 111
+N + + L PS ++ + +L K L + Q+
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI-----PY 166
VEF+HSK +HRD+KP N + + V + DFGL Q + Y
Sbjct: 128 AEAVEFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFL 206
+ GT Y S G S + D+ SLG +L L
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
Q++ V ++H +HRD+KP+N L + I DFGL+K HQ +
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK----IVEHQVL----M 207
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
K + GT Y + G D+ S+G + L G P+
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 263 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 318
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HR++ N L+G + V + DFGL++
Sbjct: 379 IHRNLAARNCLVG---ENHLVKVADFGLSR 405
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + + L+ + + + L + Q++ + F HS
Sbjct: 64 VKLLDVIHTENKL-YLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY---RDTATHQHIP--YRENKNLTGTAR 177
LHRD+KP N L+ + + DFGLA+ + T TH+ + YR + L G
Sbjct: 123 VLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 178 YAS 180
Y++
Sbjct: 180 YST 182
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 106/261 (40%), Gaps = 61/261 (23%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQL--------QYEAKLYKILQ 59
K+ L IG GS+G + + QT AIK+ K K Q+ + E +L K L
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 60 GGTGIPNL-RWFGVEGD--YNVLVIDLL-GPSLEDLFNF--------CSRKL-------- 99
PN+ R + V D Y LV++L G L D N C+ +
Sbjct: 87 H----PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142
Query: 100 -----------------SL------KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMG 136
SL K + + Q+ + + ++H++ HRDIKP+NFL
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS 202
Query: 137 LGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSR--RDD 194
++ ++ ++DFGL+K + + Y GT + + +S + D
Sbjct: 203 TN-KSFEIKLVDFGLSKEFYKLNNGE---YYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 195 LESLGYVLMYFLRGSLPWQGL 215
S G +L L G++P+ G+
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGV 279
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYKILQGGTGIPN 66
+GSG++G + + ++ E+VAIK K P Q + AK L K +Q I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK---KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 67 LRWFGVEGDY-NVLVIDLLGPSLE-DLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
L F N L+ P ++ DL K S + + L QM+ ++++HS +
Sbjct: 89 LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
HRD+KP N + ++ I+DFGLA+
Sbjct: 149 HRDLKPGNLAVN---EDCELKILDFGLAR 174
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKH-PQLQYEAKLYKILQGGTGIPNL- 67
+ K+G G +GE+Y G + + VA+K L T + EA + K ++ PNL
Sbjct: 221 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH----PNLV 276
Query: 68 RWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+ GV E + ++ + +L D C+R+ ++ +L +A Q+ + +E++ K+F
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HR++ N L+G + V + DFGL++
Sbjct: 337 IHRNLAARNCLVG---ENHLVKVADFGLSR 363
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYM-SPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQF 448
Query: 65 --PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFV 118
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + ++
Sbjct: 449 DHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 507
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161
SK F+HRDI N L+ + V + DFGL+ RY + +T+
Sbjct: 508 ESKRFVHRDIAARNVLVS---SNDCVKLGDFGLS-RYMEDSTY 546
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N ++ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLIID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ + ++ D +LG VL+Y + P
Sbjct: 205 LAPEIIISKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 120
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + A Q++ E++
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 178
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 179 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 225
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 226 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 257
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 204
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 205 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 236
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 137
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+DF LA+ D T
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN---EDCELKILDFYLARHTDDEMT 180
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI--- 64
+ LGR IG G FG+++ G + + E A+ + +KT ++ K LQ +
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYM-SPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQF 68
Query: 65 --PNL-RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFV 118
P++ + GV + V +I L +L +L +F + L L ++++ A Q+ + ++
Sbjct: 69 DHPHIVKLIGVITENPVWIIMELC-TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL 127
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
SK F+HRDI N L+ + V + DFGL++ D+
Sbjct: 128 ESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDS 164
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----NVKTKHPQLQYEAKLYKILQGGTGI 64
F +G+G+F E+ L T + A+K +K K ++ E + + ++ I
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH-ENI 82
Query: 65 PNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKS 122
L ++ LV+ L+ +LF+ K + K L Q+++ V ++H
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGG--ELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+KP+N L +++ I DFGL+K
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH--PQLQYEAKLYKILQGGTG-- 63
++ + RK+G G F ++L +IQ + VA+K+ +H E +L K ++
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 97
Query: 64 ---------IPNLRWFGVEGDYNVLVIDLLGPS-LEDLFNFCSRKLSLKTVLMLADQMIN 113
+ + + GV G + +V ++LG L+ + + L L V + Q++
Sbjct: 98 PNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 157
Query: 114 RVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYI 146
++++H+K +H DIKP+N L+ + N+ YI
Sbjct: 158 GLDYLHTKCRIIHTDIKPENILLSV----NEQYI 187
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
+ + IG GS+ + TN E A+K+ K+K + L + Q I L+
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQH-PNIITLK 82
Query: 69 WFGVEGDYNVLVIDLL--GPSLEDLFN---FCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+G Y +V +L+ G L+ + F R+ S VL + VE++H++
Sbjct: 83 DVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS--AVLF---TITKTVEYLHAQGV 137
Query: 124 LHRDIKPDNFL-MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+KP N L + + I DFG AK+ R EN L A+
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLR----------AENGLLMTPCYTANFV 187
Query: 183 THLGIEQSRRD---DLESLGYVLMYFLRGSLPW 212
+E+ D D+ SLG +L L G P+
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 111
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 112 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 169
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 170 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 197
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 94
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + A Q++ E++
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 152
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARY 178
HS ++RD+KP+N L+ + + + DFG AKR + L GT Y
Sbjct: 153 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW----------XLCGTPEY 199
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ L ++ D +LG VL+Y + P
Sbjct: 200 LAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP 231
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 90
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 91 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 148
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 149 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 176
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH--PQLQYEAKLYKILQGGTG-- 63
++ + RK+G G F ++L +IQ + VA+K+ +H E +L K ++
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 81
Query: 64 ---------IPNLRWFGVEGDYNVLVIDLLGPS-LEDLFNFCSRKLSLKTVLMLADQMIN 113
+ + + GV G + +V ++LG L+ + + L L V + Q++
Sbjct: 82 PNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 141
Query: 114 RVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYI 146
++++H+K +H DIKP+N L+ + N+ YI
Sbjct: 142 GLDYLHTKCRIIHTDIKPENILLSV----NEQYI 171
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQL-----QYEAKLYKILQGGTG 63
+R + +GSG++G + + +T +VAIK + +L E +L K ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 64 IPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 118
I L F + + LV+ +G L L KL + L QM+ + ++
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK--HEKLGEDRIQFLVYQMLKGLRYI 144
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
H+ +HRD+KP N + ++ I+DFGLA++
Sbjct: 145 HAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ 177
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKH-PQLQY-EAKLYKILQGGTG 63
F+ KIG G++G +Y N T E VA+K L+ +T+ P E L K L
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKS 122
+ L E LV + + L+ + + + L + Q++ + F HS
Sbjct: 68 VKLLDVIHTENKL-YLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
LHRD+KP N L+ + + DFGLA+ + +P R + T Y +
Sbjct: 127 VLHRDLKPQNLLIN---TEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRAPE 176
Query: 183 THLGIE-QSRRDDLESLGYVL 202
LG + S D+ SLG +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIF 197
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 91
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 92 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 149
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 150 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 177
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 22/221 (9%)
Query: 1 MEPRVG-NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYK 56
M+P+V N F + +G G+FG++ L T A+K+ V ++ + +
Sbjct: 3 MDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 57 ILQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMI 112
+LQ + L++ D V++ +LF SR+ + + +++
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG--ELFFHLSRERVFTEERARFYGAEIV 120
Query: 113 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKN 171
+ +E++HS+ ++RDIK +N ++ + + I DFGL K D AT K
Sbjct: 121 SALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATM--------KX 169
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
GT Y + + R D LG V+ + G LP+
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 90
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 91 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 148
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 149 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 176
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYK----ILQGGTG- 63
F + + IG G+FGE+ + T A+K+ K + + + E ++ +L G
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLK-RAETACFREERDVLVNGDCQ 150
Query: 64 -IPNLRWFGVEGDYNVLVIDL-LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
I L + + ++ LV+D +G L L + KL +M+ ++ +H
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 210
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
++HRDIKPDN L+ + + + DFG + D T Q + GT Y S
Sbjct: 211 HYVHRDIKPDNVLLDVN---GHIRLADFGSCLKMNDDGTVQ------SSVAVGTPDYISP 261
Query: 182 NTHLGIEQSR-----RDDLESLGYVLMYFLRGSLPW 212
+E D SLG + L G P+
Sbjct: 262 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 44/225 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYL----GTNIQTN---------EEV-----AIKLNVKTKHP 46
+ + L IG GS+GE+ + GT I+ E+V I++ HP
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 66
Query: 47 QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM 106
+ +LY+ + T I Y V+ + G E + + R
Sbjct: 67 NI---IRLYETFEDNTDI-----------YLVMELCTGGELFERVVH--KRVFRESDAAR 110
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166
+ +++ V + H + HRD+KP+NFL + + +IDFGLA R++ P
Sbjct: 111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--------PG 162
Query: 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ + GT Y S G+ D+ S G V+MY L P
Sbjct: 163 KMMRTKVGTPYYVSPQVLEGLYGPECDEW-SAG-VMMYVLLCGYP 205
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYK----ILQGGTG- 63
F + + IG G+FGE+ + T A+K+ K + + + E ++ +L G
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLK-RAETACFREERDVLVNGDCQ 134
Query: 64 -IPNLRWFGVEGDYNVLVIDL-LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
I L + + ++ LV+D +G L L + KL +M+ ++ +H
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 194
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
++HRDIKPDN L+ + + + DFG + D T Q + GT Y S
Sbjct: 195 HYVHRDIKPDNVLLDVN---GHIRLADFGSCLKMNDDGTVQ------SSVAVGTPDYISP 245
Query: 182 NTHLGIEQSR-----RDDLESLGYVLMYFLRGSLPW 212
+E D SLG + L G P+
Sbjct: 246 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVK 90
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 91 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 148
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 149 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 176
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVK 90
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 91 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 148
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 149 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 176
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+ FGLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDCELKILGFGLARHTDDEMT 180
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 40/230 (17%)
Query: 11 LGRKIGSGSFGEIYLGT--NIQTNEEVAIKLNVKTKHPQL------QYEAKLYKILQGGT 62
L R++G G+FG+++L N+ ++ + K P L Q EA+L LQ
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 63 GIPNLRWFGVEGDYNVLVI--------DL------LGPSLEDLFNFCSRK----LSLKTV 104
+ +++GV GD + L++ DL GP L + R+ L L +
Sbjct: 79 IV---KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 105 LMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRDTATHQH 163
L +A Q+ + + ++ S+ F+HRD+ N L+G AN V I DFG++ RD + +
Sbjct: 136 LHIASQIASGMVYLASQHFVHRDLATRNCLVG----ANLLVKIGDFGMS---RDVYSTDY 188
Query: 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
YR + R+ + + + + D+ S G +L F G PW
Sbjct: 189 --YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW 236
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 44/225 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYL----GTNIQTN---------EEV-----AIKLNVKTKHP 46
+ + L IG GS+GE+ + GT I+ E+V I++ HP
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 83
Query: 47 QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM 106
+ +LY+ + T I Y V+ + G E + + R
Sbjct: 84 NI---IRLYETFEDNTDI-----------YLVMELCTGGELFERVVH--KRVFRESDAAR 127
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166
+ +++ V + H + HRD+KP+NFL + + +IDFGLA R++ P
Sbjct: 128 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--------PG 179
Query: 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ + GT Y S G+ D+ S G V+MY L P
Sbjct: 180 KMMRTKVGTPYYVSPQVLEGLYGPECDEW-SAG-VMMYVLLCGYP 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ + IG G++G + + VAIK +H Q + +IL
Sbjct: 41 VGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRH 100
Query: 59 QGGTGIPN-LRWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI + LR +E +V ++ DL+ L L S++LS + Q++ ++
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLK--SQQLSNDHICYFLYQILRGLK 158
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 159 YIHSANVLHRDLKPSNLLIN---TTCDLKICDFGLAR 192
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVK 92
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 93 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 150
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 151 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 178
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 43/220 (19%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKI-LQGGTGIPNLRWFGV 72
KIG GS+G ++ N T + VAIK ++++ + + L +I + PNL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL----- 64
Query: 73 EGDYNVLVIDLLGPSLEDLFNFC-----------SRKLSLKTVLMLADQMINRVEFVHSK 121
N+L + L +F +C R + V + Q + V F H
Sbjct: 65 ---VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-------RYRDTATHQHIPYRENKNLTG 174
+ +HRD+KP+N L+ + + + + DFG A+ Y D + YR + L G
Sbjct: 122 NCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSDYYDDEVATRW--YRSPELLVG 176
Query: 175 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+Y D+ ++G V L G W G
Sbjct: 177 DTQYGPPV-----------DVWAIGCVFAELLSGVPLWPG 205
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVK 91
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 92 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 149
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 150 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 177
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 18/159 (11%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--------HPQL---QYEAKLY 55
K+ +GSG+FG ++ + + N+EV +K K K P+L E +
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMIN 113
++ I L F +G + LV++ G L DLF F R L L + Q+++
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQ-LVMEKHGSGL-DLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152
V ++ K +HRDIK +N ++ + +IDFG A
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSA 177
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKILQGGT 62
V ++ + + IG GSFG++ + + ++ VA+K+ N K H Q E ++ + L+
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 63 GIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVE 116
+ + ++ + +LL +L +L + SL V A ++ ++
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
+H +H D+KP+N L+ R+ + +IDFG + Y + I R
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFG-SSCYEHQRVYTXIQSR--------- 263
Query: 177 RYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 208
Y + LG D+ SLG +L L G
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKILQGGT 62
V ++ + + IG GSFG++ + + ++ VA+K+ N K H Q E ++ + L+
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 63 GIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVE 116
+ + ++ + +LL +L +L + SL V A ++ ++
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
+H +H D+KP+N L+ R+ + +IDFG + Y + I R
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFG-SSCYEHQRVYTXIQSR--------- 263
Query: 177 RYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 208
Y + LG D+ SLG +L L G
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQ 59
V +++ +GSG++G + + +T VA+K + H + Y E +L K ++
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 60 GGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINR 114
I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRG 137
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+D GLA+ D T
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN---EDCELKILDAGLARHTDDEMT 180
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVK 90
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 91 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 148
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 149 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 176
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 138
LV++L+ +L + + +L + + L QM+ ++ +HS +HRD+KP N ++
Sbjct: 104 LVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--- 157
Query: 139 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESL 198
+ + I+DFGLA+ + PY T Y + LG+ D+ S+
Sbjct: 158 KSDCTLKILDFGLAR--TASTNFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSV 209
Query: 199 GYVLMYFLRGSLPWQG 214
G ++ ++GS+ +QG
Sbjct: 210 GCIMGELVKGSVIFQG 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYKILQGGTGIPN 66
+GSG++G + + ++ E+VAIK K P Q + AK L K +Q I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK---KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 67 LRWFGVEGDY-NVLVIDLLGPSLE-DLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
L F N L+ P ++ DL + S + + L QM+ ++++HS +
Sbjct: 107 LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
HRD+KP N + ++ I+DFGLA+
Sbjct: 167 HRDLKPGNLAVN---EDCELKILDFGLAR 192
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ + + RK+G G + E++ G N+ NE+ IK+ K +++ E K+ + L GG I
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVK 90
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D + L+ + + F L+ + +++ +++ HS+ +H
Sbjct: 91 L--LDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMH 148
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 149 RDVKPHNVMIDHELR--KLRLIDWGLAEFY 176
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGT- 62
+ F + + IG G+F E+ + QT + A+K+ K K ++ + +L G
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 63 -GIPNLRWFGVEGDYNVLVIDL-LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
I L + + +Y LV++ +G L L + ++ + +++ ++ VH
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++HRDIKPDN L+ R + + DFG + R T
Sbjct: 181 LGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGT 217
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%)
Query: 1 MEPRVG-NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYK 56
M+PRV N+F + +G G+FG++ L T A+K+ V ++ + +
Sbjct: 3 MDPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 62
Query: 57 ILQGGTG--IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMI 112
+LQ + L++ D V++ +LF SR+ S +++
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG--ELFFHLSRERVFSEDRARFYGAEIV 120
Query: 113 NRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENK 170
+ ++++HS K+ ++RD+K +N ++ + + I DFGL K +D AT K
Sbjct: 121 SALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATM--------K 169
Query: 171 NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
GT Y + + R D LG V+ + G LP+
Sbjct: 170 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
+ + IG GS+ + TN E A+K+ K+K + L + Q I L+
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQH-PNIITLK 82
Query: 69 WFGVEGDYNVLVIDLL--GPSLEDLFN---FCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+G Y +V +L G L+ + F R+ S VL + VE++H++
Sbjct: 83 DVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS--AVLF---TITKTVEYLHAQGV 137
Query: 124 LHRDIKPDNFL-MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+KP N L + + I DFG AK+ R EN L A+
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLR----------AENGLLXTPCYTANFV 187
Query: 183 THLGIEQSRRD---DLESLGYVLMYFLRGSLPW 212
+E+ D D+ SLG +L L G P+
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKILQGGTGIPNLRW 69
+GSG++G + + +T VA+K + H + Y E +L K ++ I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 70 F----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
F +E +V LV L+G L ++ +KL+ V L Q++ ++++HS +
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
HRD+KP N + ++ I+D GLA+ D T
Sbjct: 148 HRDLKPSNLAVN---EDCELKILDRGLARHTDDEMT 180
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTG 63
++F + +G+GSFG + L + ++ A+K+ K K Q+++ +ILQ
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VN 99
Query: 64 IPNL--RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 118
P L F + + N+ +V++ + ++F+ R + S A Q++ E++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156
HS ++RD+KP+N L+ + + + DFG AKR +
Sbjct: 158 HSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVK 192
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQY-EAKLYKIL 58
V +++ +GSG++G + + +T VA+K + H + Y E +L K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 59 QGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 113
+ I L F +E +V LV L+G L ++ +KL+ V L Q++
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILR 136
Query: 114 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160
++++HS +HRD+KP N + ++ I+D GLA+ D T
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN---EDCELKILDGGLARHTDDEMT 180
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 85/221 (38%), Gaps = 22/221 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH--------PQLQYEAKLYKILQG 60
+ L IG G+F + N +T ++ A+K+ K L+ EA + +L+
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-----LSLKTVLMLADQMINRV 115
+ L + +G ++ + G L F R S Q++ +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+ H + +HRD+KP+N L+ + V + DFG+A + ++ GT
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL-------VAGGRVGT 196
Query: 176 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 216
+ + + D+ G +L L G LP+ G K
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK 237
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRW--- 69
R+IG GSFG +Y +++ +E VAIK K + Q K I++ + LR
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIK---KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT 116
Query: 70 FGVEGDY-----NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
G Y LV++ S DL + L + + + + ++HS + +
Sbjct: 117 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLA 152
HRD+K N L+ V + DFG A
Sbjct: 177 HRDVKAGNILLS---EPGLVKLGDFGSA 201
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKI-LQGGTGIPN----LR 68
++G G+FG++Y N +T+ A K+ + TK + + E + +I + PN L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKV-IDTKSEE-ELEDYMVEIDILASCDHPNIVKLLD 101
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI 128
F E + +L+ G +++ + R L+ + ++ Q ++ + ++H +HRD+
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKR 154
K N L L + + DFG++ +
Sbjct: 162 KAGNILFTLD---GDIKLADFGVSAK 184
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRW--- 69
R+IG GSFG +Y +++ +E VAIK K + Q K I++ + LR
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIK---KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT 77
Query: 70 FGVEGDY-----NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124
G Y LV++ S DL + L + + + + ++HS + +
Sbjct: 78 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLA 152
HRD+K N L+ V + DFG A
Sbjct: 138 HRDVKAGNILLS---EPGLVKLGDFGSA 162
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 135 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 194
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 195 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 222
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 144 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 203
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 204 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 231
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKI-LQGGTGIPN----LR 68
++G G+FG++Y N +T+ A K+ + TK + + E + +I + PN L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKV-IDTKSEE-ELEDYMVEIDILASCDHPNIVKLLD 101
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI 128
F E + +L+ G +++ + R L+ + ++ Q ++ + ++H +HRD+
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKR 154
K N L L + + DFG++ +
Sbjct: 162 KAGNILFTLD---GDIKLADFGVSAK 184
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 187
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 188 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH-PQLQYEAKLYKILQGGT--GIP 65
+ + IG GS+ E + TN E A+K+ K+K P + E +L+ G I
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYGQHPNII 84
Query: 66 NLRWFGVEGDYNVLVIDLL--GPSLEDLFN---FCSRKLSLKTVLMLADQMINRVEFVHS 120
L+ +G + LV +L+ G L+ + F R+ S + + VE++HS
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHS 139
Query: 121 KSFLHRDIKPDNFL-MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+KP N L + + I DFG AK+ R EN L A
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR----------AENGLLMTPCYTA 189
Query: 180 SMNTHLGIEQSRRD---DLESLGYVLMYFLRGSLPW 212
+ +++ D D+ SLG +L L G P+
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 136 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 195
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 196 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 223
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 129 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 188
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 189 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 216
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKI-LQGGTGIPN----LR 68
++G G+FG++Y N +T+ A K+ + TK + + E + +I + PN L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKV-IDTKSEE-ELEDYMVEIDILASCDHPNIVKLLD 101
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI 128
F E + +L+ G +++ + R L+ + ++ Q ++ + ++H +HRD+
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKR 154
K N L L + + DFG++ +
Sbjct: 162 KAGNILFTLD---GDIKLADFGVSAK 184
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 134 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 193
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 194 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 189
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 190 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
KIG GS G + + T T ++VA+K L + + L E + + + +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 71 GVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
V + V++ L G +L D+ +++ + + + ++ + ++H++ +HRDIK
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 131 DNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS 190
D+ L+ R + + DFG + + +P R K L GT + + +
Sbjct: 170 DSILLTSDGR---IKLSDFGFCAQ-----VSKEVPKR--KXLVGTPYWMAPEVISRLPYG 219
Query: 191 RRDDLESLGYVLMYFLRGSLPW 212
D+ SLG +++ + G P+
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 88/212 (41%), Gaps = 19/212 (8%)
Query: 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-----LQYEAKLYKILQGGTGIPN 66
+++G G F + + T +E A K K + Q + +E + ++ + + N
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKS 122
L +L+++ ++F+ C + +S V+ L Q++ V ++H +
Sbjct: 94 LHEVYENTSEIILILEYAAGG--EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+H D+KP N L+ + I+DFG++++ E + + GT Y +
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--------ELREIMGTPEYLAPE 203
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ D+ ++G + L + P+ G
Sbjct: 204 ILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGTGIPNL- 67
+ +GSG+FG +Y G + E V I + +K T P+ E ++ P+L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 68 RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLML--ADQMINRVEFVHSKSFLH 125
R GV + ++ L P L K ++ + L+L Q+ + ++ + +H
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVH 163
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAK 153
RD+ N L+ + N V I DFGLA+
Sbjct: 164 RDLAARNVLV---KSPNHVKITDFGLAR 188
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 100
Query: 59 QGGTGIPNL-RWFGVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V LV L+G L L ++ LS + Q++ ++
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK--TQHLSNDHICYFLYQILRGLK 158
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 159 YIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 192
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 234 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 261
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH-PQLQYEAKLYKILQGGT--GIPNLRWFG 71
IG GS+ E + TN E A+K+ K+K P + E +L+ G I L+
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYGQHPNIITLKDVY 90
Query: 72 VEGDYNVLVIDLL--GPSLEDLFN---FCSRKLSLKTVLMLADQMINRVEFVHSKSFLHR 126
+G + LV +L+ G L+ + F R+ S + + VE++HS+ +HR
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQGVVHR 145
Query: 127 DIKPDNFL-MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
D+KP N L + + I DFG AK+ R EN L A+
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLR----------AENGLLMTPCYTANFVAPE 195
Query: 186 GIEQSRRD---DLESLGYVLMYFLRGSLPW 212
+++ D D+ SLG +L L G P+
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQL----QYEAKLYKILQGGTGI 64
R +G G FG++ Y TN T E VA+K + PQL Q E ++ + L +
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 65 PNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+G+ +V ++ P L L ++ R + L +L+ A Q+ + ++H++ +
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVP-LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 133
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HR + N L+ R V I DFGLAK
Sbjct: 134 IHRALAARNVLLDNDRL---VKIGDFGLAK 160
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 138
LV++L+ +L + + +L + + L QM+ ++ +HS +HRD+KP N ++
Sbjct: 106 LVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--- 159
Query: 139 RRANQVYIIDFGLAKRYRDTATH-QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLES 197
+ + I+DFGLA R T+ PY T Y + LG+ + D+ S
Sbjct: 160 KSDCTLKILDFGLA---RTACTNFMMTPY------VVTRYYRAPEVILGMGYAANVDIWS 210
Query: 198 LGYVLMYFLRGSLPWQG 214
+G ++ ++G + +QG
Sbjct: 211 VGCIMGELVKGCVIFQG 227
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 180 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 239
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 240 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 267
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 189
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 190 VLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 217
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYK-ILQGGTG 63
+ + ++ ++IG G +GE+++G E+VA+K+ T+ E ++Y+ +L
Sbjct: 35 IAKQIQMVKQIGKGRYGEVWMGK--WRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHEN 92
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLED--LFNFC-SRKLSLKTVLMLADQMINRVEFVHS 120
I ++G + + L+ E+ L+++ S L K++L LA ++ + +H+
Sbjct: 93 ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 121 KSF--------LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNL 172
+ F HRD+K N L+ ++ I D GLA ++ IP
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVKFISDTNEVDIP---PNTR 206
Query: 173 TGTARY 178
GT RY
Sbjct: 207 VGTKRY 212
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQL----QYEAKLYKILQGGTGI 64
R +G G FG++ Y TN T E VA+K + PQL Q E ++ + L +
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 65 PNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSF 123
+G+ +V ++ P L L ++ R + L +L+ A Q+ + ++H++ +
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVP-LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 132
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HR + N L+ R V I DFGLAK
Sbjct: 133 IHRALAARNVLLDNDRL---VKIGDFGLAK 159
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGTGIPNL- 67
+ +GSG+FG +Y G + E V I + +K T P+ E ++ P+L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 68 RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLML--ADQMINRVEFVHSKSFLH 125
R GV + ++ L P L K ++ + L+L Q+ + ++ + +H
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVH 140
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAK 153
RD+ N L+ + N V I DFGLA+
Sbjct: 141 RDLAARNVLV---KSPNHVKITDFGLAR 165
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
+I +E++H + +HRDIKP N L+G + I DFG++ ++ +
Sbjct: 146 LIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKGSDALL-------S 195
Query: 171 NLTGTARYA---SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
N GT + S++ I + D+ ++G L F+ G P+
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKILQGGT 62
V ++ + + IG G FG++ + + ++ VA+K+ N K H Q E ++ + L+
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 63 GIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVE 116
+ + ++ + +LL +L +L + SL V A ++ ++
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176
+H +H D+KP+N L+ R+ + +IDFG + Y + I R
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFG-SSCYEHQRVYXXIQSR--------- 263
Query: 177 RYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 208
Y + LG D+ SLG +L L G
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 50/247 (20%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQ--------LQYEAK 53
PR N+ G+ +G+G+FG++ T + A+ + VK P L E K
Sbjct: 44 PR--NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK----LSLKT--VLM- 106
+ L I NL G +++ + DL NF RK + KT +M
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYC--CYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 107 -------------LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ Q+ + F+ SK+ +HRD+ N L+ GR I DFGLA+
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK---ICDFGLAR 216
Query: 154 RYRDTATHQHIPYRENKNLTGTAR----YASMNTHLGIEQSRRDDLESLGYVLM-YFLRG 208
HI N + G AR + + + + D+ S G L F G
Sbjct: 217 ---------HIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 267
Query: 209 SLPWQGL 215
S P+ G+
Sbjct: 268 SSPYPGM 274
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ + + ++++ +E++H
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGG--ELFFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTARY 178
S+ ++RDIK +N ++ + + I DFGL K D AT K GT Y
Sbjct: 126 SRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATM--------KTFCGTPEY 174
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ + R D LG V+ + G LP+
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV 72
+ IG+GSFG ++ +++ +EVAIK ++ K + E ++ +I++ + +F
Sbjct: 46 KVIGNGSFGVVFQAKLVES-DEVAIKKVLQDKRFK-NRELQIMRIVKHPNVVDLKAFFYS 103
Query: 73 EGDY-NVLVIDLLGPSLEDLFNFCSR---KLSLKTVLMLAD----QMINRVEFVHSKSFL 124
GD + + ++L+ + + SR KL ++L Q++ + ++HS
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGIC 163
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
HRDIKP N L L + + +IDFG AK
Sbjct: 164 HRDIKPQNLL--LDPPSGVLKLIDFGSAK 190
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ------HIPYRE 168
++++HS + HRD+KP+N L R + + DFG AK +T +H + PY
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYV 184
Query: 169 NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211
+ G +Y + D+ SLG V+MY L P
Sbjct: 185 APEVLGPEKY-----------DKSCDMWSLG-VIMYILLCGYP 215
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 18/216 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTG 63
+ + F+L +G G++G + T+ T E VAIK P + KIL+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 64 IPNLRWFGVE-----GDYNVLVI--DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ F ++ ++N + I +L+ L + + ++ LS + Q + V+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVK 126
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT--- 173
+H + +HRD+KP N L+ + + DFGLA+ ++A P + +T
Sbjct: 127 VLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 174 GTARYASMNTHL-GIEQSRRDDLESLGYVLM-YFLR 207
T Y + L + SR D+ S G +L FLR
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 18/216 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTG 63
+ + F+L +G G++G + T+ T E VAIK P + KIL+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 64 IPNLRWFGVE-----GDYNVLVI--DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ F ++ ++N + I +L+ L + + ++ LS + Q + V+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVK 126
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT--- 173
+H + +HRD+KP N L+ + + DFGLA+ ++A P + +T
Sbjct: 127 VLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 174 GTARYASMNTHL-GIEQSRRDDLESLGYVLM-YFLR 207
T Y + L + SR D+ S G +L FLR
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-----NVKTKHPQLQYEAKLYKILQGGTG 63
+ + + IG G+FGE+ L + T + A+KL +K +E +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKS 122
+ L + + Y +V++ + DL N S + K +++ ++ +HS
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
F+HRD+KPDN L+ ++ + + DFG +
Sbjct: 194 FIHRDVKPDNMLLD---KSGHLKLADFGTCMK 222
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ + + ++++ +E++H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGG--ELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTARY 178
S+ ++RDIK +N ++ + + I DFGL K D AT K GT Y
Sbjct: 123 SRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATM--------KTFCGTPEY 171
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ + R D LG V+ + G LP+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRH 82
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 140
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + + I DFGLA+
Sbjct: 141 YIHSANVLHRDLKPSNLLLN---TTSDLKICDFGLAR 174
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-----NVKTKHPQLQYEAKLYKILQGGTG 63
+ + + IG G+FGE+ L + T + A+KL +K +E +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKS 122
+ L + + Y +V++ + DL N S + K +++ ++ +HS
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
F+HRD+KPDN L+ ++ + + DFG +
Sbjct: 189 FIHRDVKPDNMLLD---KSGHLKLADFGTCMK 217
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP------QLQYEAKLYKILQGGT 62
+L +K+G+G FGE+++G + K+ VKT P EA L K LQ
Sbjct: 14 IKLVKKLGAGQFGEVWMGYYNNST-----KVAVKTLKPGTMSVQAFLEEANLMKTLQHDK 68
Query: 63 GIPNLRWFGV----EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 118
+ R + V E Y + G L+ L + K+ L ++ + Q+ + ++
Sbjct: 69 LV---RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
K+++HRD++ N L+ + I DFGLA+ D
Sbjct: 126 ERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIED 161
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 95
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 96 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 153
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 154 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 181
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-----NVKTKHPQLQYEAKLYKILQGGTG 63
+ + + IG G+FGE+ L + T + A+KL +K +E +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKS 122
+ L + + Y +V++ + DL N S + K +++ ++ +HS
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGG--DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
F+HRD+KPDN L+ ++ + + DFG +
Sbjct: 194 FIHRDVKPDNMLLD---KSGHLKLADFGTCMK 222
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ + + ++++ +E++H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGG--ELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTARY 178
S+ ++RDIK +N ++ + + I DFGL K D AT K GT Y
Sbjct: 123 SRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATM--------KTFCGTPEY 171
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ + R D LG V+ + G LP+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 95
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 96 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 153
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 154 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 181
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 52/248 (20%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNL 67
K+ LG+ +G+GSFG + +I++ + A+K ++ + E + K+L I +
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYK-NRELDIMKVLDHVNIIKLV 66
Query: 68 RWFGVEGD-------------------------------------YNVLVIDLLGPSLED 90
+F GD Y ++++ + +L
Sbjct: 67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHK 126
Query: 91 L---FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 147
+ F R + + + + Q+ V F+HS HRDIKP N L + + N + +
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL--VNSKDNTLKLC 184
Query: 148 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFL 206
DFG AK+ IP + + Y + LG E + DL S+G V +
Sbjct: 185 DFGSAKKL--------IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236
Query: 207 RGSLPWQG 214
G + G
Sbjct: 237 LGKPLFSG 244
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 97 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 155 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 182
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 42/243 (17%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQ--------LQYEAK 53
PR N+ G+ +G+G+FG++ T + A+ + VK P L E K
Sbjct: 21 PR--NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK----LSLKT--VLM- 106
+ L I NL G +++ + DL NF RK + KT +M
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYC--CYGDLLNFLRRKRDSFICSKTSPAIME 136
Query: 107 -------------LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ Q+ + F+ SK+ +HRD+ N L+ GR I DFGLA
Sbjct: 137 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK---ICDFGLA- 192
Query: 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
RD + + N L ++ + + + D+ S G L F GS P+
Sbjct: 193 --RDIKNDSNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 248
Query: 213 QGL 215
G+
Sbjct: 249 PGM 251
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 46/242 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
++ LG+ +G G+FG++ L I +++ VA+K+ + L E ++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLEDLFNFC---SRKL 99
K++ I NL + ++++ P LE +N +L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
S K ++ A Q+ +E++ SK +HRD+ N L+ N + I DFGLA+
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 189
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQ 213
Y T+ +P K + A + + TH + D+ S G +L F G P+
Sbjct: 190 YYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFGVLLWEIFTLGGSPYP 239
Query: 214 GL 215
G+
Sbjct: 240 GV 241
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ + + ++++ +E++H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGG--ELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTARY 178
S+ ++RDIK +N ++ + + I DFGL K D AT K GT Y
Sbjct: 123 SRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATM--------KXFCGTPEY 171
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ + R D LG V+ + G LP+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 114/289 (39%), Gaps = 55/289 (19%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP------QLQYEAKLYKILQGGT 62
+L +++G+G FGE+++G + K+ VKT P EA L K LQ
Sbjct: 15 IKLVKRLGAGQFGEVWMGYYNNST-----KVAVKTLKPGTMSVQAFLEEANLMKTLQHDK 69
Query: 63 GIPNLRWFGV----EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 118
+ R + V E Y + G L+ L + K+ L ++ + Q+ + ++
Sbjct: 70 LV---RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 119 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN--LTGTA 176
K+++HRD++ N L+ + I DFGLA+ D RE + TA
Sbjct: 127 ERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDNEYTA----REGAKFPIKWTA 179
Query: 177 RYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTXXXXXXXXXXXXVSTS 235
A I + D+ S G +L + G +P+ G +
Sbjct: 180 PEAINFGCFTI----KSDVWSFGILLYEIVTYGKIPYPG---------------RTNADV 220
Query: 236 IEALCRGY--------PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
+ AL +GY P E C + +++P + YL+ + D +
Sbjct: 221 MTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFY 269
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 101
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 102 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 159
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 160 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 187
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
L +T+ L Q + ++F+H+ +HRD+KP+N L+ G V + DFGLA+ Y
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIY 162
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+ ++L RK+G G + E++ NI NE+V +K+ K +++ E K+ + L+GG I
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 94
Query: 67 LRWFGVEGDYNVLVIDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
L + D L+ + + F + L+ + +++ +++ HS +H
Sbjct: 95 LA--DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 152
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
RD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 153 RDVKPHNVMIDHEHR--KLRLIDWGLAEFY 180
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
L +T+ L Q + ++F+H+ +HRD+KP+N L+ G V + DFGLA+ Y
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIY 162
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
L +T+ L Q + ++F+H+ +HRD+KP+N L+ G V + DFGLA+ Y
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIY 162
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 42/243 (17%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQ--------LQYEAK 53
PR N+ G+ +G+G+FG++ T + A+ + VK P L E K
Sbjct: 37 PR--NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK----LSLKT--VLM- 106
+ L I NL G +++ + DL NF RK + KT +M
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYC--CYGDLLNFLRRKRDSFICSKTSPAIME 152
Query: 107 -------------LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ Q+ + F+ SK+ +HRD+ N L+ GR I DFGLA
Sbjct: 153 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK---ICDFGLA- 208
Query: 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
RD + + N L ++ + + + D+ S G L F GS P+
Sbjct: 209 --RDIKNDSNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 264
Query: 213 QGL 215
G+
Sbjct: 265 PGM 267
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
L +T+ L Q + ++F+H+ +HRD+KP+N L+ G V + DFGLA+ Y
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIY 170
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 138 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 189
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 228
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 137 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 188
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 227
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ + + ++++ +E++H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGG--ELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTARY 178
S+ ++RDIK +N ++ + + I DFGL K D AT K GT Y
Sbjct: 123 SRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATM--------KXFCGTPEY 171
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ + R D LG V+ + G LP+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 100 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 159
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 160 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 211
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 250
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 81 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 141 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 192
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 231
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK--TKHPQLQYEAKLYKILQGGTG 63
+++ + IGSG+FG L + T E VA+K + +Q E ++ L+
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH--- 75
Query: 64 IPNL-RWFGVEGDYNVLVIDLLGPSLEDLFN-FCSR-KLSLKTVLMLADQMINRVEFVHS 120
PN+ R+ V L I + S +L+ C+ + S Q+++ V + HS
Sbjct: 76 -PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
HRD+K +N L+ G A ++ I DFG +K + + + K+ GT Y +
Sbjct: 135 MQICHRDLKLENTLLD-GSPAPRLKICDFGYSK--------SSVLHSQPKSTVGTPAYIA 185
Query: 181 MNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQ 213
L E + D+ S G L L G+ P++
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 46/242 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
++ LG+ +G G+FG++ L I +++ VA+K+ + L E ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLEDLFNFC---SRKL 99
K++ I NL + ++++ P LE +N +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
S K ++ A Q+ +E++ SK +HRD+ N L+ N + I DFGLA+
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQ 213
Y T+ +P K + A + + TH + D+ S G +L F G P+
Sbjct: 205 YYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFGVLLWEIFTLGGSPYP 254
Query: 214 GL 215
G+
Sbjct: 255 GV 256
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ + + ++++ +E++H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGG--ELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTARY 178
S+ ++RDIK +N ++ + + I DFGL K D AT K GT Y
Sbjct: 123 SRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATM--------KXFCGTPEY 171
Query: 179 ASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ + R D LG V+ + G LP+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H E + ++
Sbjct: 138 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH---AEGGKV--PIKWM 189
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYK---------- 56
F L +G+G++G++Y G +++T + AIK+ T + +++ E + K
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 57 -----ILQGGTGIPNLRWFGVEGDYNVLVIDLLGP-SLEDLF-NFCSRKLSLKTVLMLAD 109
I + G+ + W LV++ G S+ DL N L + + +
Sbjct: 86 YYGAFIKKNPPGMDDQLW---------LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICR 136
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
+++ + +H +HRDIK N L+ +V ++DFG++ + T
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTV 183
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H E + ++
Sbjct: 138 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH---AEGGKV--PIKWM 189
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRH 82
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 140
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 141 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 174
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 138
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 139 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 172
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 138
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 139 YIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 172
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 82
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 140
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 141 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 174
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H E + ++
Sbjct: 142 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH---AEGGKV--PIKWM 193
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 232
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 42/243 (17%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQ--------LQYEAK 53
PR N+ G+ +G+G+FG++ T + A+ + VK P L E K
Sbjct: 44 PR--NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK----LSLKT--VLM- 106
+ L I NL G +++ + DL NF RK + KT +M
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYC--CYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 107 -------------LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ Q+ + F+ SK+ +HRD+ N L+ GR I DFGLA
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK---ICDFGLA- 215
Query: 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
RD + + N L ++ + + + D+ S G L F GS P+
Sbjct: 216 --RDIKNDSNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 271
Query: 213 QGL 215
G+
Sbjct: 272 PGM 274
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 142
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 143 YIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 176
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 86/227 (37%), Gaps = 43/227 (18%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
N F + R IG G FGE+Y T + A+K + K K+ QG T N
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC----------LDKKRIKMKQGETLALN 237
Query: 67 LRW-----------FGVEGDYNVLVIDLLGPSLEDLFNF--CSRKLSLKTVLMLAD---- 109
R F V Y D L L DL N LS V AD
Sbjct: 238 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 296
Query: 110 --QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
++I +E +H++ ++RD+KP N L+ V I D GLA + H +
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 168 ENKNLTGTARYASMNT-HLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
GT Y + G+ D SLG +L LRG P++
Sbjct: 351 ------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 391
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 85
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 143
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 144 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 177
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 27 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 86
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 87 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 144
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 145 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 178
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 18 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 77
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 78 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 135
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 136 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 169
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 135 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 186
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 142
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 143 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 176
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 142
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 143 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 85
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 143
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 144 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 177
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 86/227 (37%), Gaps = 43/227 (18%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
N F + R IG G FGE+Y T + A+K + K K+ QG T N
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC----------LDKKRIKMKQGETLALN 238
Query: 67 LRW-----------FGVEGDYNVLVIDLLGPSLEDLFNF--CSRKLSLKTVLMLAD---- 109
R F V Y D L L DL N LS V AD
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 110 --QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
++I +E +H++ ++RD+KP N L+ V I D GLA + H +
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 168 ENKNLTGTARYASMNT-HLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
GT Y + G+ D SLG +L LRG P++
Sbjct: 352 ------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 85 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 144
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ +HRD+ N L+ + V I DFGLAK
Sbjct: 145 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 175
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 78
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 136
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 137 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 170
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 138
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 139 YIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 172
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 100
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 158
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 159 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 192
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 29 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 88
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 89 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 146
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 147 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 180
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 138
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 139 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 172
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 42/243 (17%)
Query: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQ--------LQYEAK 53
PR N+ G+ +G+G+FG++ T + A+ + VK P L E K
Sbjct: 39 PR--NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 54 LYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK----LSLKT--VLM- 106
+ L I NL G +++ + DL NF RK + KT +M
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYC--CYGDLLNFLRRKRDSFICSKTSPAIME 154
Query: 107 -------------LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ Q+ + F+ SK+ +HRD+ N L+ GR I DFGLA
Sbjct: 155 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK---ICDFGLA- 210
Query: 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
RD + + N L ++ + + + D+ S G L F GS P+
Sbjct: 211 --RDIKNDSNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 266
Query: 213 QGL 215
G+
Sbjct: 267 PGM 269
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 78
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 136
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 137 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 170
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 72 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 132 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 183
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 222
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L + LS + Q++ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--CQHLSNDHICYFLYQILRGLK 142
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 143 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 176
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 86/227 (37%), Gaps = 43/227 (18%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
N F + R IG G FGE+Y T + A+K + K K+ QG T N
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC----------LDKKRIKMKQGETLALN 238
Query: 67 LRW-----------FGVEGDYNVLVIDLLGPSLEDLFNF--CSRKLSLKTVLMLAD---- 109
R F V Y D L L DL N LS V AD
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 110 --QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
++I +E +H++ ++RD+KP N L+ V I D GLA + H +
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 168 ENKNLTGTARYASMNT-HLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
GT Y + G+ D SLG +L LRG P++
Sbjct: 352 ------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 86/227 (37%), Gaps = 43/227 (18%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
N F + R IG G FGE+Y T + A+K + K K+ QG T N
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC----------LDKKRIKMKQGETLALN 238
Query: 67 LRW-----------FGVEGDYNVLVIDLLGPSLEDLFNF--CSRKLSLKTVLMLAD---- 109
R F V Y D L L DL N LS V AD
Sbjct: 239 ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 110 --QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
++I +E +H++ ++RD+KP N L+ V I D GLA + H +
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 168 ENKNLTGTARYASMNT-HLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213
GT Y + G+ D SLG +L LRG P++
Sbjct: 352 ------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 69 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 129 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 180
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 219
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H E + ++
Sbjct: 139 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH---AEGGKV--PIKWM 190
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 229
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 20/116 (17%)
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
M+ V +H +H D+KP NFL+ G + +IDFG+A + + T
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 214
Query: 171 NLTGTARYASMNTHLGIEQSRRD-----------DLESLGYVLMYFLRGSLPWQGL 215
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRH 84
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 142
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 143 YIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 176
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKL-YKILQGGTGIPNL 67
R +G G FG++ Y TN T E VA+K PQ + K IL+ +
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 68 RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFL 124
++ G D + L+ L L ++ R + L +L+ A Q+ + ++H++ ++
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYI 156
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
HRD+ N L+ R V I DFGLAK
Sbjct: 157 HRDLAARNVLLDNDRL---VKIGDFGLAK 182
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 46/242 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
++ LG+ +G G+FG++ L I +++ VA+K+ + L E ++
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLEDLFNFC---SRKL 99
K++ I NL + ++++ P LE +N +L
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
S K ++ A Q+ +E++ SK +HRD+ N L+ N + I DFGLA+
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 196
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQ 213
Y T+ +P K + A + + TH + D+ S G +L F G P+
Sbjct: 197 YYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFGVLLWEIFTLGGSPYP 246
Query: 214 GL 215
G+
Sbjct: 247 GV 248
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 135 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 186
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 225
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 46/242 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
++ LG+ +G G+FG++ L I +++ VA+K+ + L E ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLEDLFNFC---SRKL 99
K++ I NL + ++++ P LE +N +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
S K ++ A Q+ +E++ SK +HRD+ N L+ N + I DFGLA+
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQ 213
Y T+ +P K + A + + TH + D+ S G +L F G P+
Sbjct: 205 YYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFGVLLWEIFTLGGSPYP 254
Query: 214 GL 215
G+
Sbjct: 255 GV 256
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 31/229 (13%)
Query: 8 KFRLGRKIGSGSFGEIYLGTN---IQTNEEVAIKLNVKTKHPQLQYEAKLY---KILQGG 61
K L R++G GSFG +Y G I+ E + + + L+ + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 62 TGIPNLRWFGV--EGDYNVLVIDLLG------------PSLEDLFNFCSRKLSLKTVLML 107
T +R GV +G ++V++L+ P E+ N +L+ ++ +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN--NPGRPPPTLQEMIQM 135
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
A ++ + + ++++K F+HRD+ N ++ V I DFG+ + +TA ++ +
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIYETAYYR----K 188
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 215
K L A + G+ + D+ S G VL P+QGL
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 135 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 186
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 225
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
KIG GS G + + T + + VA+K L + + L E + + Q + +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 71 GVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
V + V++ L G +L D+ +++ + + + ++ + +H++ +HRDIK
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 131 DNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS 190
D+ L+ R V + DFG + + +P R K L GT + + +
Sbjct: 276 DSILLTHDGR---VKLSDFGFCAQ-----VSKEVPRR--KXLVGTPYWMAPELISRLPYG 325
Query: 191 RRDDLESLGYVLMYFLRGSLPW 212
D+ SLG +++ + G P+
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 46/242 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
++ LG+ +G G+FG++ L I +++ VA+K+ + L E ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLEDLFNFC---SRKL 99
K++ I NL + ++++ P LE +N +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
S K ++ A Q+ +E++ SK +HRD+ N L+ N + I DFGLA+
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQ 213
Y T+ +P K + A + + TH + D+ S G +L F G P+
Sbjct: 205 YYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFGVLLWEIFTLGGSPYP 254
Query: 214 GL 215
G+
Sbjct: 255 GV 256
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 137 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 188
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 227
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTAR 177
+H K ++RD+KP+N ++ V + DFGL K T H GT
Sbjct: 137 LHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTH-------TFCGTIE 186
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
Y + + +R D SLG ++ L G+ P+ G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 46/242 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
++ LG+ +G G+FG++ L I +++ VA+K+ + L E ++
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLEDLFNFC---SRKL 99
K++ I NL + ++++ P LE +N +L
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
S K ++ A Q+ +E++ SK +HRD+ N L+ N + I DFGLA+
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 197
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQ 213
Y T+ +P K + A + + TH + D+ S G +L F G P+
Sbjct: 198 YYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFGVLLWEIFTLGGSPYP 247
Query: 214 GL 215
G+
Sbjct: 248 GV 249
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 20/116 (17%)
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
M+ V +H +H D+KP NFL+ G + +IDFG+A + + T
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 214
Query: 171 NLTGTARYASMNTHLGIEQSRRD-----------DLESLGYVLMYFLRGSLPWQGL 215
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 46/242 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
++ LG+ +G G+FG++ L I +++ VA+K+ + L E ++
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLEDLFNFC---SRKL 99
K++ I NL + ++++ P LE +N +L
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
S K ++ A Q+ +E++ SK +HRD+ N L+ N + I DFGLA+
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 193
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQ 213
Y T+ +P K + A + + TH + D+ S G +L F G P+
Sbjct: 194 YYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFGVLLWEIFTLGGSPYP 243
Query: 214 GL 215
G+
Sbjct: 244 GV 245
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 20/116 (17%)
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
M+ V +H +H D+KP NFL+ G + +IDFG+A + + T
Sbjct: 120 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 170
Query: 171 NLTGTARYASMNTHLGIEQSRRD-----------DLESLGYVLMYFLRGSLPWQGL 215
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 226
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 136 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 187
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 226
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-LQYEAKLYKIL----- 58
VG ++ IG G++G + + VAIK +H Q + KIL
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 80
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 138
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 139 YIHSANVLHRDLKPSNLLLN---TTXDLKIXDFGLAR 172
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 75 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 135 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 186
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 138 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 189
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 228
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 46/242 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
++ LG+ +G G+FG++ L I +++ VA+K+ + L E ++
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLEDLFNFC---SRKL 99
K++ I NL + ++++ P LE +N +L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
S K ++ A Q+ +E++ SK +HRD+ N L+ N + I DFGLA+
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 245
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQ 213
Y T+ +P K + A + + TH + D+ S G +L F G P+
Sbjct: 246 YYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFGVLLWEIFTLGGSPYP 295
Query: 214 GL 215
G+
Sbjct: 296 GV 297
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTG 63
+ + F+L +G G++G + T+ T E VAIK P + KIL+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 64 IPNLRWFGVE-----GDYNVLVI--DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ F ++ ++N + I +L+ L + + ++ LS + Q + V+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQTLRAVK 126
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNL---T 173
+H + +HRD+KP N L+ + + DFGLA+ ++A P + +
Sbjct: 127 VLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 174 GTARYASMNTHL-GIEQSRRDDLESLGYVLM-YFLR 207
T Y + L + SR D+ S G +L FLR
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 20/116 (17%)
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
M+ V +H +H D+KP NFL+ G + +IDFG+A + + T
Sbjct: 116 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 166
Query: 171 NLTGTARYASMNTHLGIEQSRRD-----------DLESLGYVLMYFLRGSLPWQGL 215
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 222
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 20/116 (17%)
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
M+ V +H +H D+KP NFL+ G + +IDFG+A + + T
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 167
Query: 171 NLTGTARYASMNTHLGIEQSRRD-----------DLESLGYVLMYFLRGSLPWQGL 215
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 223
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 20/116 (17%)
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENK 170
M+ V +H +H D+KP NFL+ G + +IDFG+A + + T
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 186
Query: 171 NLTGTARYASMNTHLGIEQSRRD-----------DLESLGYVLMYFLRGSLPWQGL 215
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 118 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTAR 177
+H K ++RD+KP+N ++ V + DFGL K T H GT
Sbjct: 137 LHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTH-------XFCGTIE 186
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
Y + + +R D SLG ++ L G+ P+ G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAI-KLNVKTKHPQLQYEAKLYKIL----- 58
VG ++ IG G++G + + VAI K++ Q + KIL
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 59 QGGTGIPNL-RWFGVEGDYNVLVI-DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ GI ++ R +E +V ++ DL+ L L ++ LS + Q++ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLK 142
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++HS + LHRD+KP N L+ + I DFGLA+
Sbjct: 143 YIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 176
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 15 IGSGSFGEI-YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN-LRWFGV 72
+G G+ G I Y G + N +VA+K + + + ++L+ PN +R+F
Sbjct: 32 LGHGAEGTIVYRG--MFDNRDVAVK---RILPECFSFADREVQLLRESDEHPNVIRYFCT 86
Query: 73 EGD--YNVLVIDLLGPSLEDLFNFCSRK----LSLKTVLMLADQMINRVEFVHSKSFLHR 126
E D + + I+L +L++ + +K L L+ + +L Q + + +HS + +HR
Sbjct: 87 EKDRQFQYIAIELCAATLQE---YVEQKDFAHLGLEPITLL-QQTTSGLAHLHSLNIVHR 142
Query: 127 DIKPDNFLMGLGRRANQV--YIIDFGLAKR 154
D+KP N L+ + ++ I DFGL K+
Sbjct: 143 DLKPHNILISMPNAHGKIKAMISDFGLCKK 172
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
Q++ ++F+HS +HRD+KP N L+ + Q+ + DFGLA+ Y
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLARIY 170
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 136 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 187
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 226
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 436 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 493
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R + Y+ + ++ +
Sbjct: 494 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECIN 546
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 547 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 598
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 599 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 631
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
Q++ ++F+HS +HRD+KP N L+ + Q+ + DFGLA+ Y
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLARIY 170
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 24/163 (14%)
Query: 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVA-IKLN----VKTKHPQLQYEAKLYKILQG 60
G + +IG GSF +Y G + +T EVA +L K++ + + EA+ K LQ
Sbjct: 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQH 84
Query: 61 GTGIPNLRWF------GVEGDYNVLVIDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMI 112
PN+ F V+G ++++ L S L + R +K + Q++
Sbjct: 85 ----PNIVRFYDSWESTVKGKKCIVLVTELXTS-GTLKTYLKRFKVXKIKVLRSWCRQIL 139
Query: 113 NRVEFVHSKS--FLHRDIKPDN-FLMGLGRRANQVYIIDFGLA 152
++F+H+++ +HRD+K DN F+ G V I D GLA
Sbjct: 140 KGLQFLHTRTPPIIHRDLKCDNIFITG---PTGSVKIGDLGLA 179
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 435 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 492
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R + Y+ + ++ +
Sbjct: 493 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECIN 545
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 546 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 597
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 598 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155
Q++ ++F+HS +HRD+KP N L+ + Q+ + DFGLA+ Y
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLARIY 170
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR---YRDTATHQHIPYRENKN 171
++++HS + HRD+KP+N L R + + DFG AK + T + PY
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ G +Y + D SLG + L G P+
Sbjct: 234 VLGPEKY-----------DKSCDXWSLGVIXYILLCGYPPF 263
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N+F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ S ++++ ++++H
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGG--ELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 120 S-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTAR 177
S K+ ++RD+K +N ++ + + I DFGL K +D AT K GT
Sbjct: 266 SEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATM--------KTFCGTPE 314
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
Y + + R D LG V+ + G LP+
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH--------- 161
M+ V +H +H D+KP NFL+ G + +IDFG+A + + T
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGA 219
Query: 162 -QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 215
++P K+++ + N + S + D+ SLG +L Y G P+Q +
Sbjct: 220 VNYMPPEAIKDMSSSRE----NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 14 KIGSGSFGEIYLGT--NIQTNEEV------AIKLNVKTKHPQLQYEAKLYKILQGGTGIP 65
++G G+FG+++L N+ ++ A+K ++ Q EA+L +LQ +
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV- 106
Query: 66 NLRWFGV--EGDYNVLVIDLL------------GPSLEDLF---NFCSRKLSLKTVLMLA 108
R+FGV EG ++V + + GP + L + L L +L +A
Sbjct: 107 --RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ + ++ F+HRD+ N L+G G V I DFG++ RD + + YR
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGL---VVKIGDFGMS---RDIYSTDY--YRV 216
Query: 169 NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
R+ + L + + D+ S G VL F G PW
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 261
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
KIG GS G + + T + + VA+K L + + L E + + Q + +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 71 GVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
V + V++ L G +L D+ +++ + + + ++ + +H++ +HRDIK
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 198
Query: 131 DNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS 190
D+ L+ +V + DFG + + +P R K L GT + + +
Sbjct: 199 DSILLT---HDGRVKLSDFGFCAQ-----VSKEVPRR--KXLVGTPYWMAPELISRLPYG 248
Query: 191 RRDDLESLGYVLMYFLRGSLPW 212
D+ SLG +++ + G P+
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N+F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ S ++++ ++++H
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGG--ELFFHLSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 120 S-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTAR 177
S K+ ++RD+K +N ++ + + I DFGL K +D AT K GT
Sbjct: 269 SEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATM--------KTFCGTPE 317
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
Y + + R D LG V+ + G LP+
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQ----LQYEAKLYKILQGGTGI 64
R +G G FG++ Y TN T E VA+K PQ + E + + L I
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 65 PNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSF 123
+G+ ++ ++ P L L ++ R + L +L+ A Q+ + ++HS+ +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVP-LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HR++ N L+ R V I DFGLAK
Sbjct: 139 IHRNLAARNVLLDNDRL---VKIGDFGLAK 165
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 45/234 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKL--NVKTKHPQLQYEAKLYKILQGG 61
+ ++ + +G G+FG++ + + VA+K+ NV + E ++ + L
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL--N 69
Query: 62 TGIPN--------LRWFGVEGDYNVLVIDLLGPSLEDLFN---FCSRKLSLKTVLMLADQ 110
T PN L WF G + +V +LLG S D F +L + +A Q
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHG-HICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQ 126
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN----------------QVYIIDFGLAKR 154
+ V F+HS H D+KP+N L + ++DFG A
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT- 185
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 208
Y D + L T Y + L + S+ D+ S+G +L+ + G
Sbjct: 186 YDD---------EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 11 LGRKIGSGSFGEIYLGT--NIQTNEEV------AIKLNVKTKHPQLQYEAKLYKILQGGT 62
L ++G G+FG+++L N+ ++ A+K ++ Q EA+L +LQ
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 63 GIPNLRWFGV--EGDYNVLVIDLL------------GPSLEDLF---NFCSRKLSLKTVL 105
+ R+FGV EG ++V + + GP + L + L L +L
Sbjct: 76 IV---RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165
+A Q+ + ++ F+HRD+ N L+G G V I DFG++ RD + +
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL---VVKIGDFGMS---RDIYSTDY-- 184
Query: 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 215
YR R+ + L + + D+ S G VL F G PW L
Sbjct: 185 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 235
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 41/173 (23%)
Query: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTG 63
++ +++ + IG+GS+G + + VAIK ++ + + L +I
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREI-----A 104
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD-------------- 109
I N + D+ V V+D++ P + F+ L VL +AD
Sbjct: 105 ILN----RLNHDHVVKVLDIVIPKDVEKFD------ELYVVLEIADSDFKKLFRTPVYLT 154
Query: 110 ---------QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++ V++VHS LHRD+KP N L+ + V + DFGLA+
Sbjct: 155 ELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN---QDCSVKVCDFGLAR 204
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNV----KTKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + + + P+ E +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 109 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 168
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ +HRD+ N L+ + V I DFGLAK
Sbjct: 169 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 199
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 11 LGRKIGSGSFGEIYLGT--NIQTNEEV------AIKLNVKTKHPQLQYEAKLYKILQGGT 62
L ++G G+FG+++L N+ ++ A+K ++ Q EA+L +LQ
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 63 GIPNLRWFGV--EGDYNVLVIDLL------------GPSLEDLF---NFCSRKLSLKTVL 105
+ R+FGV EG ++V + + GP + L + L L +L
Sbjct: 82 IV---RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165
+A Q+ + ++ F+HRD+ N L+G G V I DFG++ RD + +
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL---VVKIGDFGMS---RDIYSTDY-- 190
Query: 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 215
YR R+ + L + + D+ S G VL F G PW L
Sbjct: 191 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 241
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 30/174 (17%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
++ LG+ +G G+FG++ L I +++ VA+K+ + L E ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLEDLFNFC---SRKL 99
K++ I NL + ++++ P LE FN +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
S K ++ A Q+ +E++ SK +HRD+ N L+ N + I DFGLA+
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLAR 198
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
N LG+ +G G FG + G N++ + ++K+ VKT + ++ + L +
Sbjct: 34 NLLILGKILGEGEFGSVMEG-NLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKD 92
Query: 65 ---PN-LRWFGV------EGDYNVLVI-------DLLGPSLEDLFNFCSRKLSLKTVLML 107
PN +R GV +G +VI DL L + + L+T+L
Sbjct: 93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKF 152
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
+ +E++ +++FLHRD+ N ++ R V + DFGL+K+ + YR
Sbjct: 153 MVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTVCVADFGLSKK-----IYSGDYYR 204
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFL--RGSLPWQGLK 216
+ + ++ ++ + + + D+ + G V M+ + RG P+ G++
Sbjct: 205 QGRIAKMPVKWIAIESLADRVYTSKSDVWAFG-VTMWEIATRGMTPYPGVQ 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G+FG++ + + +++ VA+K+ + L E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLE---DLFNFCSRKL 99
K++ I NL + ++++ P +E D+ ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
Y T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 212 YYKNTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 260
Query: 213 QGL 215
G+
Sbjct: 261 PGI 263
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR----------DTAT 160
M+ V +H +H D+KP NFL+ G + +IDFG+A + + T
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 215
++P K+++ + N + S + D+ SLG +L Y G P+Q +
Sbjct: 192 VNYMPPEAIKDMSSSRE----NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 116
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 173
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 223
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 224 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 35/229 (15%)
Query: 11 LGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLNVKT-------KHPQLQYEAKLYKILQGGT 62
L R++G G+FG+++L E+ I + VKT EA+L LQ
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH-E 75
Query: 63 GIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFC---------------SRKLSLKTVLML 107
I VEGD ++V + + DL F +L+ +L +
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHG--DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
A Q+ + ++ S+ F+HRD+ N L+G V I DFG++ RD + + YR
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIGDFGMS---RDVYSTDY--YR 185
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGL 215
+ R+ + + + + D+ SLG VL F G PW L
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
KIG GS G + + T + + VA+K L + + L E + + Q + +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 71 GVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
V + V++ L G +L D+ +++ + + + ++ + +H++ +HRDIK
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 155
Query: 131 DNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS 190
D+ L+ R V + DFG + + +P R K L GT + + +
Sbjct: 156 DSILLTHDGR---VKLSDFGFCAQ-----VSKEVPRR--KXLVGTPYWMAPELISRLPYG 205
Query: 191 RRDDLESLGYVLMYFLRGSLPW 212
D+ SLG +++ + G P+
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPPY 227
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + VAIK K P Q Q AK L K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK---KLSRPFQNQTHAKRAYRELVLMK 78
Query: 57 ILQGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
++ I L F +E +V +V++L+ +L + +L + + L QM
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM---ELDHERMSYLLYQM 135
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLAR--TAGTSFMMTPY----- 185
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ ++G + + G
Sbjct: 186 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G+FG++ + + +++ VA+K+ + L E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLE---DLFNFCSRKL 99
K++ I NL + ++++ P +E D+ ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
Y T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 260
Query: 213 QGL 215
G+
Sbjct: 261 PGI 263
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N+F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ S ++++ ++++H
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGG--ELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 120 S-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTAR 177
S K+ ++RD+K +N ++ + + I DFGL K +D AT K GT
Sbjct: 127 SEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATM--------KXFCGTPE 175
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
Y + + R D LG V+ + G LP+
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTG 63
N+F + +G G+FG++ L T A+K+ V ++ + ++LQ
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 64 --IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVH 119
+ L++ D V++ +LF SR+ S ++++ ++++H
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGG--ELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 120 S-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTAR 177
S K+ ++RD+K +N ++ + + I DFGL K +D AT K GT
Sbjct: 126 SEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATM--------KXFCGTPE 174
Query: 178 YASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
Y + + R D LG V+ + G LP+
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI-- 64
++F++ R G G+FG + LG T VAIK ++ ++ + +I+Q +
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP----RFRNRELQIMQDLAVLHH 78
Query: 65 PNL----RWFGVEG--DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVL-------MLADQM 111
PN+ +F G D + ++++ + D + C R + V + Q+
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 112 INRVEFVH--SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
I + +H S + HRDIKP N L + + + DFG AK+
Sbjct: 139 IRSIGCLHLPSVNVCHRDIKPHNVL--VNEADGTLKLCDFGSAKK 181
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
KIG GS G + + T + + VA+K L + + L E + + Q + +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 71 GVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
V + V++ L G +L D+ +++ + + + ++ + +H++ +HRDIK
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 153
Query: 131 DNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS 190
D+ L+ R V + DFG + + +P R K L GT + + +
Sbjct: 154 DSILLTHDGR---VKLSDFGFCAQ-----VSKEVPRR--KXLVGTPYWMAPELISRLPYG 203
Query: 191 RRDDLESLGYVLMYFLRGSLPW 212
D+ SLG +++ + G P+
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPPY 225
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G+FG++ + + +++ VA+K+ + L E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLE---DLFNFCSRKL 99
K++ I NL + ++++ P +E D+ ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMRIADFGLARDINNID 211
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
Y T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 260
Query: 213 QGL 215
G+
Sbjct: 261 PGI 263
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFG 71
+KIG GSFG+ L + + + IK +N+ + + E++ + PN+ +
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 72 VEGDYN---VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN-------RVEFVHSK 121
+ N +V+D DLF R + K VL DQ+++ ++ VH +
Sbjct: 90 ESFEENGSLYIVMDYCEGG--DLFK---RINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASM 181
LHRDIK N + + V + DFG+A+ T + GT Y S
Sbjct: 145 KILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNSTVELA-------RACIGTPYYLSP 194
Query: 182 NTHLGIEQSRRDDLESLGYVL 202
+ + D+ +LG VL
Sbjct: 195 EICENKPYNNKSDIWALGCVL 215
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 30/215 (13%)
Query: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYKILQGGTGI 64
+ IGSG+ G + + VAIK K P Q Q AK L K++ I
Sbjct: 30 KPIGSGAQGIVVAAYDAILERNVAIK---KLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 65 PNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
L F +E +V +V++L+ +L + +L + + L QM+ ++ +H
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM---ELDHERMSYLLYQMLVGIKHLH 143
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
S +HRD+KP N ++ + + I+DFGLA+ + PY T Y
Sbjct: 144 SAGIIHRDLKPSNIVV---KSDATLKILDFGLAR--TAGTSFMMTPY------VVTRYYR 192
Query: 180 SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ LG+ D+ S+G ++ ++G + + G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G FG++ + + +++ VA+K+ + L E ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLE---DLFNFCSRKL 99
K++ I NL + ++++ P +E D+ ++
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 200
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
Y T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 201 YYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 249
Query: 213 QGL 215
G+
Sbjct: 250 PGI 252
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + + SG+FG +Y G I E+V I + +K P+ E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 142 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 193
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 232
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G FG++ + + +++ VA+K+ + L E ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLE---DLFNFCSRKL 99
K++ I NL + ++++ P +E D+ ++
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 257
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
Y T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 258 YYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 306
Query: 213 QGL 215
G+
Sbjct: 307 PGI 309
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
KIG GS G + + T + + VA+K L + + L E + + Q + +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 71 GVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
V + V++ L G +L D+ +++ + + + ++ + +H++ +HRDIK
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 131 DNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS 190
D+ L+ R V + DFG + + +P R K L GT + + +
Sbjct: 145 DSILLTHDGR---VKLSDFGFCAQ-----VSKEVPRR--KXLVGTPYWMAPELISRLPYG 194
Query: 191 RRDDLESLGYVLMYFLRGSLPW 212
D+ SLG +++ + G P+
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPPY 216
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G FG++ + + +++ VA+K+ + L E ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLE---DLFNFCSRKL 99
K++ I NL + ++++ P +E D+ ++
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 203
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
Y T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 204 YYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 252
Query: 213 QGL 215
G+
Sbjct: 253 PGI 255
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + + SG+FG +Y G I E+V I + +K P+ E +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 135 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 186
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 225
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
QM+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + +P+
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMVPF--- 187
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ ++G + + G
Sbjct: 188 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIK---LNVKTKHPQLQYEAKLYKILQGGTGIPNLRWF 70
KIG GS G + + T + + VA+K L + + L E + + Q + +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 71 GVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP 130
V + V++ L G +L D+ +++ + + + ++ + +H++ +HRDIK
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 131 DNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS 190
D+ L+ R V + DFG + + +P R K L GT + + +
Sbjct: 149 DSILLTHDGR---VKLSDFGFCAQ-----VSKEVPRR--KXLVGTPYWMAPELISRLPYG 198
Query: 191 RRDDLESLGYVLMYFLRGSLPW 212
D+ SLG +++ + G P+
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + VAIK K P Q Q AK L K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK---KLSRPFQNQTHAKRAYRELVLMK 78
Query: 57 ILQGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
++ I L F +E +V +V++L+ +L + +L + + L QM
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM---ELDHERMSYLLYQM 135
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLAR--TAGTSFMMTPY----- 185
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ ++G + + G
Sbjct: 186 -VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 78
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM---ELDHERMSYLLYQM 135
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPY----- 185
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 186 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 116
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 173
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 223
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 224 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFG AK H + ++
Sbjct: 137 DRRLVHRDLAARNVLV---KTPQHVKITDFGRAKLLGAEEKEYH-----AEGGKVPIKWM 188
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + VAIK K P Q Q AK L K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK---KLSRPFQNQTHAKRAYRELVLMK 78
Query: 57 ILQGGTGIPNLRWF----GVEGDYNV-LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
++ I L F +E +V +V++L+ +L + +L + + L QM
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM---ELDHERMSYLLYQM 135
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLAR--TAGTSFMMTPY----- 185
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ ++G + + G
Sbjct: 186 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 138
+V++L+ +L + +L + + L QM+ ++ +HS +HRD+KP N ++
Sbjct: 106 IVMELMDANLSQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--- 159
Query: 139 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESL 198
+ + I+DFGLA+ + PY T Y + LG+ D+ S+
Sbjct: 160 KSDCTLKILDFGLAR--TAGTSFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 199 GYVLMYFLRGSLPWQG 214
G ++ ++G + + G
Sbjct: 212 GCIMGEMIKGGVLFPG 227
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G FG++ + + +++ VA+K+ + L E ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLE---DLFNFCSRKL 99
K++ I NL + ++++ P +E D+ ++
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNVMKIADFGLARDINNID 198
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
Y T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 199 YYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 247
Query: 213 QGL 215
G+
Sbjct: 248 PGI 250
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 71
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM---ELDHERMSYLLYQM 128
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 129 LXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPY----- 178
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 179 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Query: 18 GSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKI-LQGGTGIPN----LRWFGV 72
G FG++Y N +T+ A K+ + TK + + E + +I + PN L F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKV-IDTKSEE-ELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 73 EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDN 132
E + +L+ G +++ + R L+ + ++ Q ++ + ++H +HRD+K N
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGN 138
Query: 133 FLMGLGRRANQVYIIDFGLAKR 154
L L + + DFG++ +
Sbjct: 139 ILFTLD---GDIKLADFGVSAK 157
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 91 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 148
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R + Y+ + ++ +
Sbjct: 149 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECIN 201
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 202 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 253
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 254 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 286
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 138
+V++L+ +L + +L + + L QM+ ++ +HS +HRD+KP N ++
Sbjct: 106 IVMELMDANLSQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--- 159
Query: 139 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESL 198
+ + I+DFGLA+ + PY T Y + LG+ D+ S+
Sbjct: 160 KSDATLKILDFGLAR--TAGTSFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 199 GYVLMYFLRGSLPWQG 214
G ++ ++G + + G
Sbjct: 212 GCIMGEMIKGGVLFPG 227
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMG 136
V++ + + G + + N + +L+ + ++ Q+ ++F+HS + H DI+P+N +
Sbjct: 77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQ 136
Query: 137 LGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLE 196
RR++ + II+FG A++ + P + L Y + H S D+
Sbjct: 137 -TRRSSTIKIIEFGQARQLK--------PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMW 187
Query: 197 SLGYVLMYFLRGSLPW 212
SLG ++ L G P+
Sbjct: 188 SLGTLVYVLLSGINPF 203
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFG AK H + ++
Sbjct: 142 DRRLVHRDLAARNVLV---KTPQHVKITDFGRAKLLGAEEKEYH-----AEGGKVPIKWM 193
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 232
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
QM+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY--- 186
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ ++G + + G
Sbjct: 187 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFG AK H + ++
Sbjct: 135 DRRLVHRDLAARNVLV---KTPQHVKITDFGRAKLLGAEEKEYH-----AEGGKVPIKWM 186
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 12 GRKIGSGSFGEIYLGTNIQTNEEVA----IKLNVKTKHPQLQYEAKLYKILQGGTGIPN- 66
G +G G FG+ T+ +T E + I+ + +T+ L+ E K+ + L+ PN
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK-EVKVMRCLEH----PNV 69
Query: 67 LRWFGV---EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
L++ GV + N + + G +L + + + A + + + ++HS +
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161
+HRD+ N L+ R V + DFGLA+ D T
Sbjct: 130 IHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQ 164
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQ----LQYEAKLYKILQGGTGI 64
R +G G FG++ Y TN T E VA+K PQ + E + + L I
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 65 PNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSF 123
+G+ ++ ++ P L L ++ R + L +L+ A Q+ + ++H++ +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVP-LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HR++ N L+ R V I DFGLAK
Sbjct: 139 IHRNLAARNVLLDNDRL---VKIGDFGLAK 165
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
QM+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY--- 185
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ ++G + + G
Sbjct: 186 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 28/169 (16%)
Query: 57 ILQGGTGIPNLRWFGVEGDYNV---LVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQM 111
IL+ +G PN+ + N LV DL+ +LF++ + K++L K + +
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKETRKIMRAL 133
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ + +H + +HRD+KP+N L+ + + DFG + Q P + ++
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSC--------QLDPGEKLRS 182
Query: 172 LTGTARY-------ASMN-THLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ GT Y SMN H G + D+ S G ++ L GS P+
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPG--YGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT-----ATHQHI 164
Q++ + ++HS+ +HRD+KP N + R V I DFGLAK + Q++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 165 PYRENKNLT---GTARYASMNTHLGI-EQSRRDDLESLGYVL 202
P + NLT GTA Y + G + + D+ SLG +
Sbjct: 181 P-GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 78
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 135
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 185
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 186 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
QM+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY--- 185
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ ++G + + G
Sbjct: 186 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT-----ATHQHI 164
Q++ + ++HS+ +HRD+KP N + R V I DFGLAK + Q++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 165 PYRENKNLT---GTARYASMNTHLGI-EQSRRDDLESLGYVL 202
P + NLT GTA Y + G + + D+ SLG +
Sbjct: 181 P-GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF 221
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G+FG++ + + +++ VA+K+ + L E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KILQGGTGIPNLR-------------WFGVEGDYNVLVIDLLGPSLE---DLFNFCSRKL 99
K++ I NL + +G+ + P +E D+ ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
Y T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 260
Query: 213 QGL 215
G+
Sbjct: 261 PGI 263
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 79
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 136
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 186
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 187 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 77
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 134
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 135 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 184
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 185 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 226
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 93 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R + Y+ + ++ +
Sbjct: 151 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECIN 203
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 204 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 255
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 256 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 93 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R + Y+ + ++ +
Sbjct: 151 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECIN 203
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 204 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 255
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 256 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 79
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 136
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 186
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 187 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 78
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 135
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 185
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 186 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 78
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM---ELDHERMSYLLYQM 135
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPY----- 185
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 186 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 57 ILQGGTGIPNLRWFGVEGDYNV---LVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQM 111
IL+ +G PN+ + N LV DL+ +LF++ + K++L K + +
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKETRKIMRAL 133
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ + +H + +HRD+KP+N L+ + + DFG + Q P + +
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSC--------QLDPGEKLRE 182
Query: 172 LTGTARY-------ASMN-THLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ GT Y SMN H G + D+ S G ++ L GS P+
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPG--YGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 78
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM---ELDHERMSYLLYQM 135
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPY----- 185
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 186 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 8 KFRLGRKIGSGSFGEIYLGTN---IQTNEEVAIKLNVKTKHPQLQYEAKLY---KILQGG 61
K L R++G GSFG +Y G I+ E + + + L+ + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 62 TGIPNLRWFGV--EGDYNVLVIDLLG------------PSLEDLFNFCSRKLSLKTVLML 107
T +R GV +G ++V++L+ P E+ N +L+ ++ +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN--NPGRPPPTLQEMIQM 135
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
A ++ + + ++++K F+HRD+ N ++ V I DFG+ + +T + +
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIXETDXXR----K 188
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 215
K L A + G+ + D+ S G VL P+QGL
Sbjct: 189 GGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G+FG++ + + +++ VA+K+ + L E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KILQGGTGIPNLR-------------WFGVEGDYNVLVIDLLGPSLE---DLFNFCSRKL 99
K++ I NL + +G+ + P +E D+ ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-----R 154
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
Y T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 260
Query: 213 QGL 215
G+
Sbjct: 261 PGI 263
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 72
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 129
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 179
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 180 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 8 KFRLGRKIGSGSFGEIYLGTN---IQTNEEVAIKLNVKTKHPQLQYEAKLY---KILQGG 61
K L R++G GSFG +Y G I+ E + + + L+ + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 62 TGIPNLRWFGV--EGDYNVLVIDLLG------------PSLEDLFNFCSRKLSLKTVLML 107
T +R GV +G ++V++L+ P E+ N +L+ ++ +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN--NPGRPPPTLQEMIQM 135
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
A ++ + + ++++K F+HRD+ N ++ V I DFG+ + +T + +
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIXETDXXR----K 188
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 215
K L A + G+ + D+ S G VL P+QGL
Sbjct: 189 GGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQLQYEAKLYKILQGGTGI- 64
+ + L IGSG+ + E+VAIK +N++ + +L K +Q +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD---ELLKEIQAMSQCH 66
Query: 65 -PNLRWF---GVEGDYNVLVIDLL-GPSLEDLFNFCSRK-------LSLKTVLMLADQMI 112
PN+ + V D LV+ LL G S+ D+ K L T+ + +++
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 113 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY-RENKN 171
+E++H +HRD+K N L+G V I DFG++ AT I + K
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFL---ATGGDITRNKVRKT 180
Query: 172 LTGTARYASMNTHLGIEQSR----RDDLESLGYVLMYFLRGSLPW 212
GT + + +EQ R + D+ S G + G+ P+
Sbjct: 181 FVGTPCWMAPEV---MEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 72
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 129
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 179
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 180 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 71 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 128
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R + Y+ + ++ +
Sbjct: 129 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECIN 181
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 182 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 233
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 234 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 266
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 20 FGEIYLGTNIQTNEEVAIKLNVKT--KHP----QLQYEAKLYKILQGGTGIPNLRWFGVE 73
G++Y + VA+KL +T P + Q EA+ LQ +P + ++
Sbjct: 47 XGDVYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEID 106
Query: 74 GDYNVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPD 131
G L +D + DL R+ L+ + + Q+ + ++ H+ HRD+KP+
Sbjct: 107 GQ---LYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPE 163
Query: 132 NFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSR 191
N L+ A Y++DFG+A D Q N GT Y + +
Sbjct: 164 NILVSADDFA---YLVDFGIASATTDEKLTQL------GNTVGTLYYXAPERFSESHATY 214
Query: 192 RDDLESLGYVLMYFLRGSLPWQG 214
R D+ +L VL L GS P+QG
Sbjct: 215 RADIYALTCVLYECLTGSPPYQG 237
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 38/183 (20%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+G+++ + +G G G ++ + ++ VAIK V T +++ + KI++
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR---- 64
Query: 65 PNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLAD--------------- 109
++ D V V ++LGPS L + L +V ++ +
Sbjct: 65 -------LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPL 117
Query: 110 ----------QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
Q++ ++++HS + LHRD+KP N + + I DFGLA+
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV--LKIGDFGLARIMDPHY 175
Query: 160 THQ 162
+H+
Sbjct: 176 SHK 178
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 71
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 128
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 129 LCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY----- 178
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 179 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + + SG+FG +Y G I E+V I + +K P+ E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 82 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFGLAK H + ++
Sbjct: 142 DRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH-----AEGGKVPIKWM 193
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 232
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 8 KFRLGRKIGSGSFGEIYLGTN---IQTNEEVAIKLNVKTKHPQLQYEAKLY---KILQGG 61
K L R++G GSFG +Y G I+ E + + + L+ + +++G
Sbjct: 15 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 74
Query: 62 TGIPNLRWFGV--EGDYNVLVIDLLG------------PSLEDLFNFCSRKLSLKTVLML 107
T +R GV +G ++V++L+ P E+ N +L+ ++ +
Sbjct: 75 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN--NPGRPPPTLQEMIQM 132
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
A ++ + + ++++K F+HRD+ N ++ V I DFG+ + +T + +
Sbjct: 133 AAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIXETDXXR----K 185
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 215
K L A + G+ + D+ S G VL P+QGL
Sbjct: 186 GGKGLLPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 233
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 8 KFRLGRKIGSGSFGEIYLGTN---IQTNEEVAIKLNVKTKHPQLQYEAKLY---KILQGG 61
K L R++G GSFG +Y G I+ E + + + L+ + +++G
Sbjct: 17 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 76
Query: 62 TGIPNLRWFGV--EGDYNVLVIDLLG------------PSLEDLFNFCSRKLSLKTVLML 107
T +R GV +G ++V++L+ P E+ N +L+ ++ +
Sbjct: 77 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN--NPGRPPPTLQEMIQM 134
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
A ++ + + ++++K F+HRD+ N ++ V I DFG+ + +T ++ +
Sbjct: 135 AAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYR----K 187
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 215
K L A + G+ + D+ S G VL P+QGL
Sbjct: 188 GGKGLLPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 235
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LNVKTKHPQLQYEAKLYKILQGGTGI- 64
+ + L IGSG+ + E+VAIK +N++ + +L K +Q +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD---ELLKEIQAMSQCH 71
Query: 65 -PNLRWF---GVEGDYNVLVIDLL-GPSLEDLFNFCSRK-------LSLKTVLMLADQMI 112
PN+ + V D LV+ LL G S+ D+ K L T+ + +++
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 113 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY-RENKN 171
+E++H +HRD+K N L+G V I DFG++ AT I + K
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFL---ATGGDITRNKVRKT 185
Query: 172 LTGTARYASMNTHLGIEQSR----RDDLESLGYVLMYFLRGSLPW 212
GT + + +EQ R + D+ S G + G+ P+
Sbjct: 186 FVGTPCWMAPEV---MEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 44/181 (24%)
Query: 4 RVGNKFRL-GRKIGSGSFGEIYL------------------GTNIQTNEEVAIKLNVKTK 44
RV + F G K+G G++G +Y GT I + I L + K
Sbjct: 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELK 76
Query: 45 HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV-LVIDLLGPSLEDLFNFC-SRKLSLK 102
HP + L K+ F D V L+ D L + F + K + K
Sbjct: 77 HPNV---ISLQKV------------FLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKK 121
Query: 103 TVLM-------LADQMINRVEFVHSKSFLHRDIKPDNFL-MGLGRRANQVYIIDFGLAKR 154
V + L Q+++ + ++H+ LHRD+KP N L MG G +V I D G A+
Sbjct: 122 PVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 155 Y 155
+
Sbjct: 182 F 182
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 83 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 140
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R + Y+ + ++ +
Sbjct: 141 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECIN 193
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 194 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 245
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 246 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 77 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R + Y+ + ++ +
Sbjct: 135 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECIN 187
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 188 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 239
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 240 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKL--NVKTKHPQLQYEAK-LYKILQGGTG 63
++ + +G G+FG + + + VA+K+ NV+ + E L KI +
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPD 93
Query: 64 IPNL-----RWFGVEGDYNVLVIDLLGPSLEDLF---NFCSRKLSLKTVLMLADQMINRV 115
NL WF G + + +LLG S D N+ + V +A Q+ V
Sbjct: 94 NKNLCVQMFDWFDYHG-HMCISFELLGLSTFDFLKDNNYLP--YPIHQVRHMAFQLCQAV 150
Query: 116 EFVHSKSFLHRDIKPDNFLM---------GLGRRANQ-------VYIIDFGLAKRYRDTA 159
+F+H H D+KP+N L L ++ ++ V ++DFG A T
Sbjct: 151 KFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA-----TF 205
Query: 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 208
H+H + + T Y + L + S+ D+ S+G ++ + G
Sbjct: 206 DHEH-----HSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 8 KFRLGRKIGSGSFGEIYLGTN---IQTNEEVAIKLNVKTKHPQLQYEAKLY---KILQGG 61
K L R++G GSFG +Y G I+ E + + + L+ + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 62 TGIPNLRWFGV--EGDYNVLVIDLLG------------PSLEDLFNFCSRKLSLKTVLML 107
T +R GV +G ++V++L+ P E+ N +L+ ++ +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN--NPGRPPPTLQEMIQM 135
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
A ++ + + ++++K F+HRD+ N ++ V I DFG+ + +T ++ +
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYR----K 188
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 215
K L A + G+ + D+ S G VL P+QGL
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVI-----------------DLLGPSLEDLFNFCSRKLS 100
+ + NL + ++VI + P E + L+
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 101 LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTA 159
L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+ Y+D
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 205
Query: 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGLK 216
Y + ++ + T + + D+ S G +L F G+ P+ G+K
Sbjct: 206 ------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 257
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFG AK H + ++
Sbjct: 137 DRRLVHRDLAARNVLV---KTPQHVKITDFGRAKLLGAEEKEYH-----AEGGKVPIKWM 188
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 227
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 73 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 130
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R + Y+ + ++ +
Sbjct: 131 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECIN 183
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 184 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 235
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 236 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 57 ILQGGTGIPNLRWFGVEGDYNV---LVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQM 111
IL+ +G PN+ + N LV DL+ +LF++ + K++L K + +
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKETRKIMRAL 120
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ + +H + +HRD+KP+N L+ + + DFG + Q P + +
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFS--------CQLDPGEKLRE 169
Query: 172 LTGTARY-------ASMN-THLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+ GT Y SMN H G + D+ S G ++ L GS P+
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPG--YGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFG AK H + ++
Sbjct: 137 DRRLVHRDLAARNVLV---KTPQHVKITDFGRAKLLGAEEKEYH-----AEGGKVPIKWM 188
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 227
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 49/244 (20%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 58 LQGGTGIPNLRW-----------------FGVEGDY-----NVLVIDLLGPSLEDLF-NF 94
+ + NL FG Y N V + P EDL+ +F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDF 135
Query: 95 CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+
Sbjct: 136 ----LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARD 188
Query: 155 -YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
Y+D Y + ++ + T + + D+ S G +L F G+ P+
Sbjct: 189 IYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 213 QGLK 216
G+K
Sbjct: 243 PGVK 246
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 49/244 (20%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 58 LQGGTGIPNLRW-----------------FGVEGDY-----NVLVIDLLGPSLEDLF-NF 94
+ + NL FG Y N V + P EDL+ +F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDF 144
Query: 95 CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+
Sbjct: 145 ----LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARD 197
Query: 155 -YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
Y+D Y + ++ + T + + D+ S G +L F G+ P+
Sbjct: 198 IYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 213 QGLK 216
G+K
Sbjct: 252 PGVK 255
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 49/244 (20%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 58 LQGGTGIPNLRW-----------------FGVEGDY-----NVLVIDLLGPSLEDLF-NF 94
+ + NL FG Y N V + P EDL+ +F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDF 135
Query: 95 CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+
Sbjct: 136 ----LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARD 188
Query: 155 -YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
Y+D Y + ++ + T + + D+ S G +L F G+ P+
Sbjct: 189 IYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 213 QGLK 216
G+K
Sbjct: 243 PGVK 246
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 13 RKIGSGSFGEIYL------GTNIQTNEEVAIK-LNVKTKHPQLQYEAKLYKILQGGTGIP 65
R +G G FG++ L G N T E+VA+K L ++ + K +IL+
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDN--TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN 84
Query: 66 NLRWFGV----EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
+++ G+ G+ L+++ L SL++ K++LK L A Q+ ++++ S
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ ++HRD+ N L+ +QV I DFGL K
Sbjct: 145 RQYVHRDLAARNVLV---ESEHQVKIGDFGLTK 174
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 20/221 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGT 62
+F+ + +GSG+FG +Y G I E+V I + +K P+ E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 63 GIPNL-RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
P++ R G+ V +I L P L D + + +L Q+ + ++
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+ +HRD+ N L+ + V I DFG AK H + ++
Sbjct: 139 DRRLVHRDLAARNVLV---KTPQHVKITDFGRAKLLGAEEKEYH-----AEGGKVPIKWM 190
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLKA 217
++ + L + + D+ S G + LM F GS P+ G+ A
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTF--GSKPYDGIPA 229
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G+FG++ + + +++ VA+K+ + L E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLE---DLFNFCSRKL 99
K++ I NL + ++++ P +E D+ ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT- 158
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 159 ----ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 212 XXKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 260
Query: 213 QGL 215
G+
Sbjct: 261 PGI 263
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 21/196 (10%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP--------QLQYEAKL-YKILQ 59
+ + ++G+G FG + + T E+VAIK + P ++Q KL + +
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKT--VLMLADQMINRVE 116
+P+ D +L ++ G L N LK + L + + +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD-------TATHQHIP--YR 167
++H +HRD+KP+N ++ G + IID G AK T Q++
Sbjct: 137 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 196
Query: 168 ENKNLTGTARYASMNT 183
E K T T Y S T
Sbjct: 197 EQKKYTVTVDYWSFGT 212
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 41/239 (17%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVI------------------DLLGPSLEDLF-NFCSRK 98
+ + NL + ++VI + + EDL+ +F
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF---- 144
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA RD
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLA---RDI 198
Query: 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGLK 216
+ + L ++ + T + + D+ S G +L F G+ P+ G+K
Sbjct: 199 XKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 21/196 (10%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP--------QLQYEAKL-YKILQ 59
+ + ++G+G FG + + T E+VAIK + P ++Q KL + +
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 60 GGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKT--VLMLADQMINRVE 116
+P+ D +L ++ G L N LK + L + + +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD-------TATHQHIP--YR 167
++H +HRD+KP+N ++ G + IID G AK T Q++
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL 195
Query: 168 ENKNLTGTARYASMNT 183
E K T T Y S T
Sbjct: 196 EQKKYTVTVDYWSFGT 211
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 110 QMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166
Q V ++HS K+ +HRD+KP N L+ G + I DFG A D TH
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTAC---DIQTHM---- 160
Query: 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVL 202
N G+A + + G S + D+ S G +L
Sbjct: 161 ---TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIIL 193
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 110 QMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166
Q V ++HS K+ +HRD+KP N L+ G + I DFG A D TH
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTAC---DIQTHM---- 161
Query: 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVL 202
N G+A + + G S + D+ S G +L
Sbjct: 162 ---TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIIL 194
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 48/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-------VAIKL----NVKTKHPQLQYEAKLY 55
+K LG+ +G G+FG++ + + +++ VA+K+ + L E ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 56 KILQGGTGIPNLRWFGVEGDYNVLVIDLLG-------------PSLE---DLFNFCSRKL 99
K++ I NL + ++++ P +E D+ ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT- 158
+ K ++ Q+ +E++ S+ +HRD+ N L+ N + I DFGLA+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 159 ----ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPW 212
T+ +P K + A + + TH + D+ S G VLM+ F G P+
Sbjct: 212 XXKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWEIFTLGGSPY 260
Query: 213 QGL 215
G+
Sbjct: 261 PGI 263
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 13 RKIGSGSFGEIYL------GTNIQTNEEVAIK-LNVKTKHPQLQYEAKLYKILQGGTGIP 65
R +G G FG++ L G N T E+VA+K L ++ + K +IL+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDN--TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN 72
Query: 66 NLRWFGVE----GDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120
+++ G+ G+ L+++ L SL++ K++LK L A Q+ ++++ S
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ ++HRD+ N L+ +QV I DFGL K
Sbjct: 133 RQYVHRDLAARNVLV---ESEHQVKIGDFGLTK 162
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-QLQYEAK-------LYK 56
V +++ + IGSG+ G + + + VAIK K P Q Q AK L K
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMK 78
Query: 57 ILQGGTGIPNLRWFGVEGDYN-----VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQM 111
+ I L F + LV++L+ +L + +L + + L QM
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQM 135
Query: 112 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKN 171
+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPY----- 185
Query: 172 LTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ +R + + G
Sbjct: 186 -VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 56 KILQGGTGIPN-LRWFGVEGDYNVLVI--DLLGPSLEDLF---NFCSRKLSLK---TVLM 106
K+L PN +R++ E L I +L +L+DL N L L+ +
Sbjct: 60 KLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS 119
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR--ANQ--------VYIIDFGLAKRYR 156
L Q+ + V +HS +HRD+KP N L+ R A+Q + I DFGL K+
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 157 DTATHQHIPYREN-KNLTGTARY-------ASMNTHLGIEQSRRDDLESLGYVLMYFL-R 207
+ +R N N +GT+ + S N +R D+ S+G V Y L +
Sbjct: 180 SGQSS----FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 208 GSLPW 212
G P+
Sbjct: 236 GKHPF 240
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 20/212 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
F + IG GSFG++ L + EEV + V K L+ + + + + + + N++
Sbjct: 40 FHFLKVIGKGSFGKVLLARH--KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 69 W-FGVEGDYNVLVIDLLGPSLE-----DLFNFCSRKLSL--KTVLMLADQMINRVEFVHS 120
F V ++ D L L+ +LF R+ A ++ + + ++HS
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYAS 180
+ ++RD+KP+N L+ + + DFGL K + H GT Y +
Sbjct: 158 LNIVYRDLKPENILLD---SQGHIVLTDFGLCK---ENIEHN----STTSTFCGTPEYLA 207
Query: 181 MNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
R D LG VL L G P+
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 49/244 (20%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 58 LQGGTGIPNLRW-----------------FGVEGDY-----NVLVIDLLGPSLEDLF-NF 94
+ + NL FG Y N V + P EDL+ +F
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDF 181
Query: 95 CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+
Sbjct: 182 ----LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARD 234
Query: 155 -YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPW 212
Y+D Y + ++ + T + + D+ S G +L F G+ P+
Sbjct: 235 IYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
Query: 213 QGLK 216
G+K
Sbjct: 289 PGVK 292
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
QM+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ TA + E
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR----TAGTSFMMTPE- 185
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
T Y + LG+ D+ S+G ++ ++G + + G
Sbjct: 186 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
L+ + +L A Q+ +EF+ KS +HRD+ N L+ G+ V I DFGLA RD
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV---VKICDFGLA---RDI 222
Query: 159 ATHQHIPYRENKNL 172
+ + R N L
Sbjct: 223 MSDSNYVVRGNARL 236
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 30/196 (15%)
Query: 28 NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPS 87
N + N+ + + L+V K Y + + GT I N F + ++L+G
Sbjct: 63 NKEENKRILMDLDVVLKSHDCPYIVQCF-----GTFITNTDVF--------IAMELMGTC 109
Query: 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYI 146
E L + + + + ++ + ++ K +HRD+KP N L+ Q+ +
Sbjct: 110 AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGQIKL 166
Query: 147 IDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRD-----DLESLGYV 201
DFG++ R D + G A Y + + ++ D D+ SLG
Sbjct: 167 CDFGISGRLVDD--------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218
Query: 202 LMYFLRGSLPWQGLKA 217
L+ G P++ K
Sbjct: 219 LVELATGQFPYKNCKT 234
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 45/234 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKL--NVKTKHPQLQYEAKLYKILQGG 61
+ ++ + +G G+FG++ + + VA+K+ NV + E ++ + L
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL--N 69
Query: 62 TGIPN--------LRWFGVEGDYNVLVIDLLGPSLEDLFN---FCSRKLSLKTVLMLADQ 110
T PN L WF G + +V +LLG S D F +L + +A Q
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHG-HICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQ 126
Query: 111 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN----------------QVYIIDFGLAKR 154
+ V F+HS H D+KP+N L + ++DFG A
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT- 185
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 208
Y D + L Y + L + S+ D+ S+G +L+ + G
Sbjct: 186 YDD---------EHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 84/219 (38%), Gaps = 31/219 (14%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-----NVKTKHPQLQYEAKLYKILQGGTG 63
+ + + IG G+FGE+ L + + + A+KL +K +E +
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKS 122
+ L + Y +V++ + DL N S + K +++ ++ +HS
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGG--DLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT---------ATHQHIPYRENKNLT 173
+HRD+KPDN L+ + + + DFG + +T T +I K+
Sbjct: 195 LIHRDVKPDNMLLD---KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
G Y R D S+G L L G P+
Sbjct: 252 GDGYYG-----------RECDWWSVGVFLFEMLVGDTPF 279
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 111/273 (40%), Gaps = 26/273 (9%)
Query: 13 RKIGSGSFGEI---YLGTNIQTNEEVAIKLNVKTKHPQLQYEA-KLYKILQGGTGIPNLR 68
+++GSG+FG + Y L + P L+ E ++Q +R
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 69 WFGV-EGDYNVLVIDL--LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 125
G+ E + +LV+++ LGP + L +R + K ++ L Q+ ++++ +F+H
Sbjct: 77 MIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHL 185
RD+ N L+ A I DFGL+K R Y+ + ++ +
Sbjct: 135 RDLAARNVLLVTQHYAK---ISDFGLSKALRADENX----YKAQTHGKWPVKWYAPECIN 187
Query: 186 GIEQSRRDDLESLGYVLMY--FLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRGY 243
+ S + D+ S G VLM+ F G P++G+K G
Sbjct: 188 YYKFSSKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-------GC 239
Query: 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276
P E + C + +++P +A ++ R+ +
Sbjct: 240 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 32/185 (17%)
Query: 56 KILQGGTGIPN-LRWFGVEGDYNVLVI--DLLGPSLEDLF---NFCSRKLSLK---TVLM 106
K+L PN +R++ E L I +L +L+DL N L L+ +
Sbjct: 60 KLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS 119
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR--ANQ--------VYIIDFGLAKRYR 156
L Q+ + V +HS +HRD+KP N L+ R A+Q + I DFGL K+
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL- 178
Query: 157 DTATHQHIPYREN-KNLTGTARY-------ASMNTHLGIEQSRRDDLESLGYVLMYFL-R 207
D+ +R N N +GT+ + S N +R D+ S+G V Y L +
Sbjct: 179 DSGQXX---FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 208 GSLPW 212
G P+
Sbjct: 236 GKHPF 240
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 90/235 (38%), Gaps = 46/235 (19%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ- 59
M + L IG G FGE++ G EEVA+K+ + EA++Y+ +
Sbjct: 3 MGSTIARTIVLQESIGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTVML 60
Query: 60 ---------GGTGIPNLRW--FGVEGDYNVLVIDLLGPSLEDLFNFCSR---------KL 99
N W + DY+ LF++ +R KL
Sbjct: 61 RHENILGFIAADNKDNGTWTQLWLVSDYH---------EHGSLFDYLNRYTVTVEGMIKL 111
Query: 100 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159
+L T LA + V + HRD+K N L+ ++ I D GLA R+ D+A
Sbjct: 112 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRH-DSA 167
Query: 160 THQHIPYRENKNLTGTARYA-------SMNTHLGIEQSRRDDLESLGYVLMYFLR 207
T I N + GT RY S+N E +R D+ ++G V R
Sbjct: 168 TDT-IDIAPNHRV-GTKRYMAPEVLDDSINMK-HFESFKRADIYAMGLVFWEIAR 219
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 42/184 (22%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 58 LQGGTGIPNLRW-----------------FGVEGDY-----NVLVIDLLGPSLEDLF-NF 94
+ + NL FG Y N V + P EDL+ +F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDF 144
Query: 95 CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+
Sbjct: 145 ----LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARD 197
Query: 155 -YRD 157
Y+D
Sbjct: 198 IYKD 201
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 9 FRLGRKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++G G+FG + Y T E VA+K + L+ + +IL+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 65 PNLRWFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+++ GV G N+ +I P SL D + ++ +L Q+ +E++
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+K ++HRD+ N L+ N+V I DFGL K
Sbjct: 135 TKRYIHRDLATRNILV---ENENRVKIGDFGLTK 165
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 41/179 (22%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 58 LQGGTGIPNLRW-----------------FGVEGDY-----NVLVIDLLGPSLEDLF-NF 94
+ + NL FG Y N V + P EDL+ +F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDF 135
Query: 95 CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+
Sbjct: 136 ----LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLAR 187
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 59/244 (24%)
Query: 4 RVGN----KFRLGRKIGSGSFGEIY---------------LGTNIQTNEEVA-IKLNVKT 43
R+G+ ++ + +G G+FG++ + N+ E A +++NV
Sbjct: 12 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLK 71
Query: 44 KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLF---NFCSRKLS 100
K + E K +L WF G + + +LLG + + NF +
Sbjct: 72 KIKEKDKENKFLCVLMSD-------WFNFHG-HMCIAFELLGKNTFEFLKENNF--QPYP 121
Query: 101 LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR----------------RANQV 144
L V +A Q+ + + F+H H D+KP+N L + +
Sbjct: 122 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI 181
Query: 145 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY 204
+ DFG A T H+H + + T Y L + ++ D+ S+G +L
Sbjct: 182 RVADFGSA-----TFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
Query: 205 FLRG 208
+ RG
Sbjct: 232 YYRG 235
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 28/181 (15%)
Query: 56 KILQGGTGIPN-LRWFGVEGDYNVLVI--DLLGPSLEDLF---NFCSRKLSLK---TVLM 106
K+L PN +R++ E L I +L +L+DL N L L+ +
Sbjct: 78 KLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS 137
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR--ANQ--------VYIIDFGLAKRYR 156
L Q+ + V +HS +HRD+KP N L+ R A+Q + I DFGL K+
Sbjct: 138 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL- 196
Query: 157 DTATHQHIPYREN-KNLTGTARYAS---MNTHLGIEQSRRDDLESLGYVLMYFL-RGSLP 211
D+ +R N N +GT+ + + + +R D+ S+G V Y L +G P
Sbjct: 197 DSGQXX---FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 212 W 212
+
Sbjct: 254 F 254
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 44/230 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ----- 59
+ L IG G FGE++ G EEVA+K+ + EA++Y+ +
Sbjct: 40 IARTIVLQESIGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 97
Query: 60 -----GGTGIPNLRW--FGVEGDYNVLVIDLLGPSLEDLFNFCSR---------KLSLKT 103
N W + DY+ LF++ +R KL+L T
Sbjct: 98 ILGFIAADNKDNGTWTQLWLVSDYH---------EHGSLFDYLNRYTVTVEGMIKLALST 148
Query: 104 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163
LA + V + HRD+K N L+ ++ I D GLA R+ D+AT
Sbjct: 149 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRH-DSATDT- 203
Query: 164 IPYRENKNLTGTARYAS---MNTHLGI---EQSRRDDLESLGYVLMYFLR 207
I N + GT RY + ++ + + E +R D+ ++G V R
Sbjct: 204 IDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 28/181 (15%)
Query: 56 KILQGGTGIPN-LRWFGVEGDYNVLVI--DLLGPSLEDLF---NFCSRKLSLK---TVLM 106
K+L PN +R++ E L I +L +L+DL N L L+ +
Sbjct: 78 KLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS 137
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR--ANQ--------VYIIDFGLAKRYR 156
L Q+ + V +HS +HRD+KP N L+ R A+Q + I DFGL K+
Sbjct: 138 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL- 196
Query: 157 DTATHQHIPYREN-KNLTGTARYAS---MNTHLGIEQSRRDDLESLGYVLMYFL-RGSLP 211
D+ +R N N +GT+ + + + +R D+ S+G V Y L +G P
Sbjct: 197 DSGQXX---FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 212 W 212
+
Sbjct: 254 F 254
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 44/230 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ----- 59
+ L IG G FGE++ G EEVA+K+ + EA++Y+ +
Sbjct: 27 IARTIVLQESIGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 84
Query: 60 -----GGTGIPNLRW--FGVEGDYNVLVIDLLGPSLEDLFNFCSR---------KLSLKT 103
N W + DY+ LF++ +R KL+L T
Sbjct: 85 ILGFIAADNKDNGTWTQLWLVSDYH---------EHGSLFDYLNRYTVTVEGMIKLALST 135
Query: 104 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163
LA + V + HRD+K N L+ ++ I D GLA R+ D+AT
Sbjct: 136 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRH-DSATDT- 190
Query: 164 IPYRENKNLTGTARYAS---MNTHLGI---EQSRRDDLESLGYVLMYFLR 207
I N + GT RY + ++ + + E +R D+ ++G V R
Sbjct: 191 IDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 41/179 (22%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 58 LQGGTGIPNLRW-----------------FGVEGDY-----NVLVIDLLGPSLEDLF-NF 94
+ + NL FG Y N V + P EDL+ +F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDF 135
Query: 95 CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+
Sbjct: 136 ----LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLAR 187
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ +LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 58 LQGGTGIPNLRW-----------------FGVEGDY-----NVLVIDLLGPSLEDLF-NF 94
+ + NL FG Y N V + P EDL+ +F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDF 144
Query: 95 CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA
Sbjct: 145 ----LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLA-- 195
Query: 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQ 213
RD + + L ++ + T + + D+ S G +L F G+ P+
Sbjct: 196 -RDIXKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 214 GLK 216
G+K
Sbjct: 253 GVK 255
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 89/231 (38%), Gaps = 46/231 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ----- 59
+ L IG G FGE++ G EEVA+K+ + EA++Y+ +
Sbjct: 2 IARTIVLQESIGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 59
Query: 60 -----GGTGIPNLRW--FGVEGDYNVLVIDLLGPSLEDLFNFCSR---------KLSLKT 103
N W + DY+ LF++ +R KL+L T
Sbjct: 60 ILGFIAADNKDNGTWTQLWLVSDYH---------EHGSLFDYLNRYTVTVEGMIKLALST 110
Query: 104 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163
LA + V + HRD+K N L+ ++ I D GLA R+ D+AT
Sbjct: 111 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRH-DSATDT- 165
Query: 164 IPYRENKNLTGTARYA-------SMNTHLGIEQSRRDDLESLGYVLMYFLR 207
I N + GT RY S+N E +R D+ ++G V R
Sbjct: 166 IDIAPNHRV-GTKRYMAPEVLDDSINMK-HFESFKRADIYAMGLVFWEIAR 214
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 59/244 (24%)
Query: 4 RVGN----KFRLGRKIGSGSFGEIY---------------LGTNIQTNEEVA-IKLNVKT 43
R+G+ ++ + +G G+FG++ + N+ E A +++NV
Sbjct: 21 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLK 80
Query: 44 KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLF---NFCSRKLS 100
K + E K +L WF G + + +LLG + + NF +
Sbjct: 81 KIKEKDKENKFLCVLMSD-------WFNFHG-HMCIAFELLGKNTFEFLKENNF--QPYP 130
Query: 101 LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR----------------RANQV 144
L V +A Q+ + + F+H H D+KP+N L + +
Sbjct: 131 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI 190
Query: 145 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY 204
+ DFG A T H+H + + T Y L + ++ D+ S+G +L
Sbjct: 191 RVADFGSA-----TFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
Query: 205 FLRG 208
+ RG
Sbjct: 241 YYRG 244
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 147
L+D NF L+ +L L + +E +H+K + HRD+KP N L+G Q ++
Sbjct: 124 LKDKGNF----LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG---DEGQPVLM 176
Query: 148 DFGLAKR--YRDTATHQHIPYRENKNLTGTARYA-----SMNTHLGIEQSRRDDLESLGY 200
D G + + Q + ++ T Y S+ +H I++ R D+ SLG
Sbjct: 177 DLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDE--RTDVWSLGC 234
Query: 201 VLMYFLRGSLPW 212
VL + G P+
Sbjct: 235 VLYAMMFGEGPY 246
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 89/231 (38%), Gaps = 46/231 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ----- 59
+ L IG G FGE++ G EEVA+K+ + EA++Y+ +
Sbjct: 4 IARTIVLQESIGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 61
Query: 60 -----GGTGIPNLRW--FGVEGDYNVLVIDLLGPSLEDLFNFCSR---------KLSLKT 103
N W + DY+ LF++ +R KL+L T
Sbjct: 62 ILGFIAADNKDNGTWTQLWLVSDYH---------EHGSLFDYLNRYTVTVEGMIKLALST 112
Query: 104 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163
LA + V + HRD+K N L+ ++ I D GLA R+ D+AT
Sbjct: 113 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRH-DSATDT- 167
Query: 164 IPYRENKNLTGTARYA-------SMNTHLGIEQSRRDDLESLGYVLMYFLR 207
I N + GT RY S+N E +R D+ ++G V R
Sbjct: 168 IDIAPNHRV-GTKRYMAPEVLDDSINMK-HFESFKRADIYAMGLVFWEIAR 216
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRD 157
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+ Y+D
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKD 253
Query: 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGLK 216
Y + ++ + T + + D+ S G +L F G+ P+ G+K
Sbjct: 254 PD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 307
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 89/231 (38%), Gaps = 46/231 (19%)
Query: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ----- 59
+ L IG G FGE++ G EEVA+K+ + EA++Y+ +
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 58
Query: 60 -----GGTGIPNLRW--FGVEGDYNVLVIDLLGPSLEDLFNFCSR---------KLSLKT 103
N W + DY+ LF++ +R KL+L T
Sbjct: 59 ILGFIAADNKDNGTWTQLWLVSDYH---------EHGSLFDYLNRYTVTVEGMIKLALST 109
Query: 104 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163
LA + V + HRD+K N L+ ++ I D GLA R+ D+AT
Sbjct: 110 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRH-DSATDT- 164
Query: 164 IPYRENKNLTGTARYA-------SMNTHLGIEQSRRDDLESLGYVLMYFLR 207
I N + GT RY S+N E +R D+ ++G V R
Sbjct: 165 IDIAPNHRV-GTKRYMAPEVLDDSINMK-HFESFKRADIYAMGLVFWEIAR 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
QM+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY--- 190
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVL 202
T Y + LG+ DL S+G ++
Sbjct: 191 ---VVTRYYRAPEVILGMGYKENVDLWSVGCIM 220
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 98/222 (44%), Gaps = 37/222 (16%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV 72
+G G+ ++ G + +T + AIK+ N+ P + + + +++L+ ++ F +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP-VDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 73 EGD----YNVLVIDL-----LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
E + + VL+++ L LE+ N + L L++ ++ + +
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 124 LHRDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HR+IKP N + +G VY + DFG A+ D + +L GT Y +
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--------EQFVSLYGTEEYLHPD 185
Query: 183 THLGIEQS--RRD---------DLESLGYVLMYFLRGSLPWQ 213
+ E++ R+D DL S+G + GSLP++
Sbjct: 186 MY---ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRD 157
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+ Y+D
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKD 246
Query: 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGLK 216
Y + ++ + T + + D+ S G +L F G+ P+ G+K
Sbjct: 247 PD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 300
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
R++G G+FG + Y T E VA+K + L+ + +IL+ ++
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 69 WFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+ GV G N+ +I P SL + ++ +L Q+ +E++ +K +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+ N+V I DFGL K
Sbjct: 139 IHRDLATRNILV---ENENRVKIGDFGLTK 165
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRD 157
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+ Y+D
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKD 251
Query: 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGLK 216
Y + ++ + T + + D+ S G +L F G+ P+ G+K
Sbjct: 252 PD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 305
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 59/244 (24%)
Query: 4 RVGN----KFRLGRKIGSGSFGEIY---------------LGTNIQTNEEVA-IKLNVKT 43
R+G+ ++ + +G G+FG++ + N+ E A +++NV
Sbjct: 44 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLK 103
Query: 44 KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLF---NFCSRKLS 100
K + E K +L WF G + + +LLG + + NF +
Sbjct: 104 KIKEKDKENKFLCVLMSD-------WFNFHG-HMCIAFELLGKNTFEFLKENNF--QPYP 153
Query: 101 LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR----------------RANQV 144
L V +A Q+ + + F+H H D+KP+N L + +
Sbjct: 154 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI 213
Query: 145 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY 204
+ DFG A T H+H + + T Y L + ++ D+ S+G +L
Sbjct: 214 RVADFGSA-----TFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
Query: 205 FLRG 208
+ RG
Sbjct: 264 YYRG 267
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRD 157
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+ Y+D
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKD 244
Query: 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGLK 216
Y + ++ + T + + D+ S G +L F G+ P+ G+K
Sbjct: 245 PD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 298
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
QM+ ++ +HS +HRD+KP N ++ + + I+DFGLA+ + PY
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR--TAGTSFMMTPY--- 179
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVL 202
T Y + LG+ DL S+G ++
Sbjct: 180 ---VVTRYYRAPEVILGMGYKENVDLWSVGCIM 209
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 81/221 (36%), Gaps = 22/221 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ--------LQYEAKLYKILQG 60
+ L IG G F + N +T ++ A+K+ K L+ EA + +L+
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-----LSLKTVLMLADQMINRV 115
+ L + +G ++ + G L F R S Q++ +
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+ H + +HRD+KP L+ + V + FG+A + ++ GT
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL-------VAGGRVGT 198
Query: 176 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 216
+ + + D+ G +L L G LP+ G K
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK 239
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 8 KFRLGRKIGSGSFGEIYLGTN---IQTNEEVAIKLNVKTKHPQLQYEAKLY---KILQGG 61
K L R++G GSFG +Y G I+ E + + + L+ + +++G
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 62 TGIPNLRWFGV--EGDYNVLVIDLLG------------PSLEDLFNFCSRKLSLKTVLML 107
T +R GV +G ++V++L+ P E+ N +L+ ++ +
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN--NPGRPPPTLQEMIQM 135
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
A ++ + + ++++K F+HR++ N ++ V I DFG+ + +T ++ +
Sbjct: 136 AAEIADGMAYLNAKKFVHRNLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYR----K 188
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 215
K L A + G+ + D+ S G VL P+QGL
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 236
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 65/250 (26%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKIL-- 84
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVIDLLGPS------LEDLFNFC----------SRK--- 98
+ +++ V++LLG L + FC S++
Sbjct: 85 --------------IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 99 ----------LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I D
Sbjct: 131 VPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICD 187
Query: 149 FGLAKR-YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFL 206
FGLA+ Y+D Y + ++ + T + + D+ S G +L F
Sbjct: 188 FGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Query: 207 RGSLPWQGLK 216
G+ P+ G+K
Sbjct: 242 LGASPYPGVK 251
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT-----ATHQHI 164
Q++ + ++HS+ +HR++KP N + R V I DFGLAK + Q++
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 165 PYRENKNLT---GTARYASMNTHLGI-EQSRRDDLESLGYVLM 203
P + NLT GTA Y + G + + D SLG +
Sbjct: 181 P-GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF 222
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 45/220 (20%)
Query: 13 RKIGSGSFGEIYLG-------TNIQTNEEVAI---------KLNVKTKHPQLQYEAKLYK 56
++IGSG FG ++LG I+T E A+ ++ +K HP+L +LY
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL---VQLYG 69
Query: 57 ILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ I + F G L D + +T+L + + +
Sbjct: 70 VCLEQAPICLVFEFMEHG------------CLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
++ S +HRD+ N L+G NQV + DFG+ + D Y +
Sbjct: 118 YLEEASVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQ------YTSSTGTKFP 167
Query: 176 ARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPWQ 213
++AS S + D+ S G VLM+ F G +P++
Sbjct: 168 VKWASPEVFSFSRYSSKSDVWSFG-VLMWEVFSEGKIPYE 206
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
+++G G+FG + Y T E VA+K + L+ + +IL+ ++
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 69 WFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+ GV G N+ +I P SL D ++ +L Q+ +E++ +K +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+ N+V I DFGL K
Sbjct: 143 IHRDLATRNILV---ENENRVKIGDFGLTK 169
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 104 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 138
V+ A +M+ +E VH +H DIKPDNF++G G
Sbjct: 174 VISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNG 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
+++G G+FG + Y T E VA+K + L+ + +IL+ ++
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 69 WFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+ GV G N+ +I P SL D ++ +L Q+ +E++ +K +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+ N+V I DFGL K
Sbjct: 141 IHRDLATRNILV---ENENRVKIGDFGLTK 167
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 8 KFRLGRKIGSGSFGEIYLGTN---IQTNEEVAIKLNVKTKHPQLQYEAKLY---KILQGG 61
K L R++G GSFG +Y G I+ E + + + L+ + +++G
Sbjct: 19 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 78
Query: 62 TGIPNLRWFGV--EGDYNVLVIDLLG------------PSLEDLFNFCSRKLSLKTVLML 107
T +R GV +G ++V++L+ P E+ N +L+ ++ +
Sbjct: 79 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN--NPGRPPPTLQEMIQM 136
Query: 108 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167
A ++ + + ++++K F+HR++ N ++ V I DFG+ + +T ++ +
Sbjct: 137 AAEIADGMAYLNAKKFVHRNLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYR----K 189
Query: 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGL 215
K L A + G+ + D+ S G VL P+QGL
Sbjct: 190 GGKGLLPVRWMAPESLKDGVFTT-SSDMWSFGVVLWEITSLAEQPYQGL 237
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 9 FRLGRKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++G G+FG + Y T E VA+K + L+ + +IL+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 65 PNLRWFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+++ GV G N+ +I P SL D ++ +L Q+ +E++
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+K ++HRD+ N L+ N+V I DFGL K
Sbjct: 135 TKRYIHRDLATRNILV---ENENRVKIGDFGLTK 165
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
Q++ V H LHRD+KP N L+ + + DFGLA+ + IP R
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLARAF-------GIPVRSY 176
Query: 170 KNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRG 208
+ T Y + + +G ++ S D+ S+G + + G
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 37/222 (16%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV 72
+G G+ ++ G + +T + AIK+ N+ P + + + +++L+ ++ F +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP-VDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 73 EGD----YNVLVIDL-----LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
E + + VL+++ L LE+ N + L L++ ++ + +
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 124 LHRDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HR+IKP N + +G VY + DFG A+ D + L GT Y +
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--------EQFVXLYGTEEYLHPD 185
Query: 183 THLGIEQS--RRD---------DLESLGYVLMYFLRGSLPWQ 213
+ E++ R+D DL S+G + GSLP++
Sbjct: 186 MY---ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 9 FRLGRKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++G G+FG + Y T E VA+K + L+ + +IL+
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 102
Query: 65 PNLRWFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+++ GV G N+ +I P SL D ++ +L Q+ +E++
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+K ++HRD+ N L+ N+V I DFGL K
Sbjct: 163 TKRYIHRDLATRNILV---ENENRVKIGDFGLTK 193
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 81/221 (36%), Gaps = 22/221 (9%)
Query: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH--------PQLQYEAKLYKILQG 60
+ L IG G F + N +T ++ A+K+ K L+ EA + +L+
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 61 GTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRK-----LSLKTVLMLADQMINRV 115
+ L + +G ++ + G L F R S Q++ +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 116 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
+ H + +HRD+KP L+ + V + FG+A + ++ GT
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL-------VAGGRVGT 196
Query: 176 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 216
+ + + D+ G +L L G LP+ G K
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK 237
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
Q++ V H LHRD+KP N L+ + + DFGLA+ + IP R
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLARAF-------GIPVRSY 176
Query: 170 KNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRG 208
+ T Y + + +G ++ S D+ S+G + + G
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 9 FRLGRKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++G G+FG + Y T E VA+K + L+ + +IL+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 65 PNLRWFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+++ GV G N+ +I P SL D ++ +L Q+ +E++
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+K ++HRD+ N L+ N+V I DFGL K
Sbjct: 132 TKRYIHRDLATRNILV---ENENRVKIGDFGLTK 162
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
Q+++ +E +H ++ ++RD+KP+N L+ V I D GLA + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQT-------KT 346
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
K GT + + LG E D +LG L + P++
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
+++G G+FG + Y T E VA+K + L+ + +IL+ ++
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 69 WFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+ GV G N+ +I P SL D ++ +L Q+ +E++ +K +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+ N+V I DFGL K
Sbjct: 142 IHRDLATRNILV---ENENRVKIGDFGLTK 168
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
+++G G+FG + Y T E VA+K + L+ + +IL+ ++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 69 WFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+ GV G N+ +I P SL D ++ +L Q+ +E++ +K +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+ N+V I DFGL K
Sbjct: 154 IHRDLATRNILV---ENENRVKIGDFGLTK 180
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 9 FRLGRKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++G G+FG + Y T E VA+K + L+ + +IL+
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 75
Query: 65 PNLRWFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+++ GV G N+ +I P SL D ++ +L Q+ +E++
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+K ++HRD+ N L+ N+V I DFGL K
Sbjct: 136 TKRYIHRDLATRNILV---ENENRVKIGDFGLTK 166
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
Q+++ +E +H ++ ++RD+KP+N L+ V I D GLA + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQT-------KT 346
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
K GT + + LG E D +LG L + P++
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
Q+++ +E +H ++ ++RD+KP+N L+ V I D GLA + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQT-------KT 346
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
K GT + + LG E D +LG L + P++
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169
Q+++ +E +H ++ ++RD+KP+N L+ V I D GLA + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQT-------KT 346
Query: 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
K GT + + LG E D +LG L + P++
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 9 FRLGRKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++G G+FG + Y T E VA+K + L+ + +IL+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 65 PNLRWFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+++ GV G N+ +I P SL D ++ +L Q+ +E++
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+K ++HRD+ N L+ N+V I DFGL K
Sbjct: 132 TKRYIHRDLATRNILV---ENENRVKIGDFGLTK 162
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 9 FRLGRKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++G G+FG + Y T E VA+K + L+ + +IL+
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 70
Query: 65 PNLRWFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+++ GV G N+ +I P SL D ++ +L Q+ +E++
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+K ++HRD+ N L+ N+V I DFGL K
Sbjct: 131 TKRYIHRDLATRNILV---ENENRVKIGDFGLTK 161
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLG 138
Q+I+ +E++HS+ +H+DIKP N L+ G
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTG 145
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 9 FRLGRKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGI 64
+ +++G G+FG + Y T E VA+K + L+ + +IL+
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 69
Query: 65 PNLRWFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+++ GV G N+ +I P SL D ++ +L Q+ +E++
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+K ++HRD+ N L+ N+V I DFGL K
Sbjct: 130 TKRYIHRDLATRNILV---ENENRVKIGDFGLTK 160
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
+++G G+FG + Y T E VA+K + L+ + +IL+ ++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 69 WFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+ GV G N+ +I P SL D ++ +L Q+ +E++ +K +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+ N+V I DFGL K
Sbjct: 154 IHRDLATRNILV---ENENRVKIGDFGLTK 180
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
++++HS + HRD+KP+N L R + + DFG AK
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 107 LADQMINRVEFVHSK-SFLHRDIKPDNFLM-GLGRRANQVYIIDFGLAKRYRDTAT 160
+A ++ +E +HSK S +HRD+KP N L+ LG QV + DFG++ D+
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG----QVKMCDFGISGYLVDSVA 209
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 27/164 (16%)
Query: 11 LGRKIGSGSFGEIYLG-TNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNL-- 67
L R +G G+FGE+Y G + N+ +++ VKT P++ E L I L
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKLNH 93
Query: 68 ----RWFGV--EGDYNVLVIDLLGPSLEDLFNFC---------SRKLSLKTVLMLADQMI 112
R GV + ++++L+ DL +F L++ +L +A +
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGG--DLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 113 NRVEFVHSKSFLHRDIKPDNFLM---GLGRRANQVYIIDFGLAK 153
+++ F+HRDI N L+ G GR A I DFG+A+
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK---IGDFGMAR 192
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTGI 64
+ R+ R + G F +Y ++ + E A+K N + K+ + E K L +G
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKL---SGH 85
Query: 65 PNLRWF------GVE----GDYNVLVIDLL--GPSLEDLFNFCSR-KLSLKTVLMLADQM 111
PN+ F G E G L++ L G +E L SR LS TVL + Q
Sbjct: 86 PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145
Query: 112 INRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQ--VYIIDFGLA 152
V+ +H + +HRD+K +N L+ +NQ + + DFG A
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLLL-----SNQGTIKLCDFGSA 185
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 13 RKIGSGSFGEI----YLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLR 68
+++G G+FG + Y T E VA+K + L+ + +IL+ ++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 69 WFGV---EGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 123
+ GV G N+ +I P SL D ++ +L Q+ +E++ +K +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+HRD+ N L+ N+V I DFGL K
Sbjct: 136 IHRDLATRNILV---ENENRVKIGDFGLTK 162
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 65/250 (26%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKIL-- 84
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVIDLLGPS------LEDLFNFC----------SRK--- 98
+ +++ V++LLG L + FC S++
Sbjct: 85 --------------IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 99 ----------LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I D
Sbjct: 131 VPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKIXD 187
Query: 149 FGLAKR-YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFL 206
FGLA+ Y+D Y + ++ + T + + D+ S G +L F
Sbjct: 188 FGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Query: 207 RGSLPWQGLK 216
G+ P+ G+K
Sbjct: 242 LGASPYPGVK 251
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 45/220 (20%)
Query: 13 RKIGSGSFGEIYLG-------TNIQTNEEVAI---------KLNVKTKHPQLQYEAKLYK 56
++IGSG FG ++LG I+T E A+ ++ +K HP+L +LY
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL---VQLYG 70
Query: 57 ILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 116
+ I + F G L D + +T+L + + +
Sbjct: 71 VCLEQAPICLVTEFMEHG------------CLSDYLRTQRGLFAAETLLGMCLDVCEGMA 118
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVY-IIDFGLAKRYRDTATHQHIPYRENKNLTGT 175
++ +HRD+ N L+G NQV + DFG+ + D Y +
Sbjct: 119 YLEEACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQ------YTSSTGTKFP 168
Query: 176 ARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPWQ 213
++AS S + D+ S G VLM+ F G +P++
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFG-VLMWEVFSEGKIPYE 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%)
Query: 4 RVG-NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQ 59
R+G + F R +G GSFG++ L +T + A+K+ +V + ++ +IL
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 60 GGTGIPNLRWFGV---EGDYNVLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINR 114
P L D V++ + G L +F+ SR+ A ++I+
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISA 136
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
+ F+H K ++RD+K DN L+ + DFG+ K
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKE 173
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 36/176 (20%)
Query: 7 NKFRLGRKIGSGSFGEIY----LGTN-IQTNEEVAIKL----NVKTKHPQLQYEAKLYKI 57
++ LG+ +G G+FG++ G + T VA+K+ ++H L E K+
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 58 LQGGTGIPNLRWFGVEGDYNVLVI-----------------DLLGP--SLEDLF-NFCSR 97
+ + NL + ++VI + P + EDL+ +F
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF--- 144
Query: 98 KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
L+L+ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I DFGLA+
Sbjct: 145 -LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLAR 196
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 19/157 (12%)
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+KP N L+ ++ + DFG++ + D+ + + GT Y S
Sbjct: 145 IMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVGTRSYMSPE 192
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVSTSIEALCRG 242
G S + D+ S+G L+ G P + +G+ V+ L G
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP---IGSGSGSMAIFELLDYIVNEPPPKLPSG 249
Query: 243 -YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278
+ EF + + C + + A LK+L FI+
Sbjct: 250 VFSLEFQDFVNKC---LIKNPAERADLKQLMVHAFIK 283
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
QM+ ++ +HS +HRD+KP N ++ + + I+DFGLA+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 174
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 32/258 (12%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLY---KIL 58
+P N FR R +G G FGE+ T + A K K + + + EA +IL
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 59 QGGTG--IPNLRWFGVEGDYNVLVIDLL-GPSLE-DLFNFCSRKLSLKTVLMLADQMINR 114
+ + +L + D LV+ L+ G L+ +++ + A ++
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN-KNLT 173
+E +H + ++RD+KP+N L+ + I D GLA H+P + K
Sbjct: 299 LEDLHRERIVYRDLKPENILLD---DHGHIRISDLGLAV---------HVPEGQTIKGRV 346
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVS 233
GT Y + + D +LG +L + G P+Q K
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK------------R 394
Query: 234 TSIEALCRGYPTEFASYF 251
+E L + P E++ F
Sbjct: 395 EEVERLVKEVPEEYSERF 412
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 27/164 (16%)
Query: 11 LGRKIGSGSFGEIYLG-TNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNL-- 67
L R +G G+FGE+Y G + N+ +++ VKT P++ E L I L
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKLNH 107
Query: 68 ----RWFGV--EGDYNVLVIDLLGPSLEDLFNFC---------SRKLSLKTVLMLADQMI 112
R GV + ++++L+ DL +F L++ +L +A +
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGG--DLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 113 NRVEFVHSKSFLHRDIKPDNFLM---GLGRRANQVYIIDFGLAK 153
+++ F+HRDI N L+ G GR A I DFG+A+
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK---IGDFGMAR 206
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 110 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
QM+ ++ +HS +HRD+KP N ++ + + I+DFGLA+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 174
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 89 EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148
ED F ++++ ++ + Q+ +EF+ S+ +HRD+ N L+ N V I D
Sbjct: 186 EDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLS---ENNVVKICD 242
Query: 149 FGLAK 153
FGLA+
Sbjct: 243 FGLAR 247
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 70 FGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDI 128
F +G+ ++ + + G SL+ + R + + + ++ +I + ++ K +HRD+
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE 188
KP N L+ ++ + DFG++ + D+ + + GT Y S G
Sbjct: 194 KPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVGTRSYMSPERLQGTH 241
Query: 189 QSRRDDLESLGYVLMYFLRGSLP 211
S + D+ S+G L+ G P
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ-GGTGIP 65
+ +G IG G FG++Y G + + EVAI+L + + Q +A +++ T
Sbjct: 33 EQLEIGELIGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHE 89
Query: 66 NLRWF--GVEGDYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 121
N+ F ++ +I L G +L + L + +A +++ + ++H+K
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGL 151
LH+D+K N G+ V I DFGL
Sbjct: 150 GILHKDLKSKNVFYDNGK----VVITDFGL 175
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 32/258 (12%)
Query: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLY---KIL 58
+P N FR R +G G FGE+ T + A K K + + + EA +IL
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 59 QGGTG--IPNLRWFGVEGDYNVLVIDLL-GPSLE-DLFNFCSRKLSLKTVLMLADQMINR 114
+ + +L + D LV+ L+ G L+ +++ + A ++
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN-KNLT 173
+E +H + ++RD+KP+N L+ + I D GLA H+P + K
Sbjct: 299 LEDLHRERIVYRDLKPENILLD---DHGHIRISDLGLAV---------HVPEGQTIKGRV 346
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTXXXXXXXXXXXXVS 233
GT Y + + D +LG +L + G P+Q K
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK------------R 394
Query: 234 TSIEALCRGYPTEFASYF 251
+E L + P E++ F
Sbjct: 395 EEVERLVKEVPEEYSERF 412
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Query: 107 LADQMINRVEFVHSK-SFLHRDIKPDNFLM-GLGRRANQVYIIDFGLA 152
+A ++ +E +HSK S +HRD+KP N L+ LG QV + DFG++
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG----QVKMCDFGIS 157
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNV------KTKHPQLQYEAKLYKILQGGTGIPNL 67
++G GS+GE++ + + A+K ++ K + +L K+ Q + L
Sbjct: 64 RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCV-RL 122
Query: 68 RWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 127
EG L +L GPSL+ L V + + +HS+ +H D
Sbjct: 123 EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLD 182
Query: 128 IKPDNFLMGLGRRANQVYIIDFGL 151
+KP N +G R + DFGL
Sbjct: 183 VKPANIFLGPRGRCK---LGDFGL 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 70 FGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDI 128
F +G+ ++ + + G SL+ + R + + + ++ +I + ++ K +HRD+
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE 188
KP N L+ ++ + DFG++ + D+ + + GT Y S G
Sbjct: 159 KPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVGTRSYMSPERLQGTH 206
Query: 189 QSRRDDLESLGYVLMYFLRGSLP 211
S + D+ S+G L+ G P
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 70 FGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDI 128
F +G+ ++ + + G SL+ + R + + + ++ +I + ++ K +HRD+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE 188
KP N L+ ++ + DFG++ + D+ + + GT Y S G
Sbjct: 132 KPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVGTRSYMSPERLQGTH 179
Query: 189 QSRRDDLESLGYVLMYFLRGSLP 211
S + D+ S+G L+ G P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNL--- 67
L R +G G FGE+Y G E I + VKT + K K + + NL
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGE-KINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHP 85
Query: 68 ---RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK 121
+ G+ + +I L P E L ++ R L + T+++ + Q+ + ++ S
Sbjct: 86 HIVKLIGIIEEEPTWIIMELYPYGE-LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
+ +HRDI N L+ V + DFGL++ D
Sbjct: 145 NCVHRDIAVRNILVA---SPECVKLGDFGLSRYIED 177
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 93/219 (42%), Gaps = 38/219 (17%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFG 71
+IG G++G + + + + +A+K T + Q Q L +++ ++++G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 72 V---EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVL--MLADQMINRVEFVHSKSF--- 123
EGD + ++L+ S + + + + +VL ++ ++++ ++ K+
Sbjct: 89 ALFREGDCWI-CMELMSTSFDKFYKY------VYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 124 ------LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI----PYRENKNLT 173
+HRDIKP N L+ R+ + + DFG++ + D+ PY + +
Sbjct: 142 KENLKIIHRDIKPSNILLD---RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERID 198
Query: 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 212
+A + R D+ SLG L G P+
Sbjct: 199 PSASRQGYDV--------RSDVWSLGITLYELATGRFPY 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+KP N L+ ++ + DFG++ + D+ + + GT Y S
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVGTRSYMSPE 173
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G S + D+ S+G L+ G P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+KP N L+ ++ + DFG++ + D+ + + GT Y S
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVGTRSYMSPE 173
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G S + D+ S+G L+ G P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 27/164 (16%)
Query: 11 LGRKIGSGSFGEIYLG-TNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN--- 66
L R +G G+FGE+Y G + N+ +++ VKT P++ E L I
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVYSEQDELDFLMEALIISKFNH 107
Query: 67 ---LRWFGV--EGDYNVLVIDLLGPSLEDLFNFC---------SRKLSLKTVLMLADQMI 112
+R GV + ++++L+ DL +F L++ +L +A +
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGG--DLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 113 NRVEFVHSKSFLHRDIKPDNFLM---GLGRRANQVYIIDFGLAK 153
+++ F+HRDI N L+ G GR A I DFG+A+
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK---IGDFGMAR 206
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNL--- 67
L R +G G FGE+Y G E I + VKT + K K + + NL
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGE-KINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHP 69
Query: 68 ---RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK 121
+ G+ + +I L P E L ++ R L + T+++ + Q+ + ++ S
Sbjct: 70 HIVKLIGIIEEEPTWIIMELYPYGE-LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
+ +HRDI N L+ V + DFGL++ D
Sbjct: 129 NCVHRDIAVRNILVA---SPECVKLGDFGLSRYIED 161
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Query: 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNL--- 67
L R +G G FGE+Y G E I + VKT + K K + + NL
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGE-KINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHP 73
Query: 68 ---RWFGVEGDYNVLVIDLLGPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK 121
+ G+ + +I L P E L ++ R L + T+++ + Q+ + ++ S
Sbjct: 74 HIVKLIGIIEEEPTWIIMELYPYGE-LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157
+ +HRDI N L+ V + DFGL++ D
Sbjct: 133 NCVHRDIAVRNILVA---SPECVKLGDFGLSRYIED 165
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 70 FGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDI 128
F +G+ ++ + + G SL+ + R + + + ++ +I + ++ K +HRD+
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 129 KPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE 188
KP N L+ ++ + DFG++ + D ++ + GT Y S G
Sbjct: 135 KPSNILV---NSRGEIKLCDFGVSGQLIDEMANEFV---------GTRSYMSPERLQGTH 182
Query: 189 QSRRDDLESLGYVLMYFLRGSLP 211
S + D+ S+G L+ G P
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+KP N L+ ++ + DFG++ + D+ + + GT Y S
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVGTRSYMSPE 173
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G S + D+ S+G L+ G P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+KP N L+ ++ + DFG++ + D+ + + GT Y S
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVGTRSYMSPE 173
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G S + D+ S+G L+ G P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 107 LADQMINRVEFVHSK-SFLHRDIKPDNFLM-GLGRRANQVYIIDFGLA 152
+A ++ +E +HSK S +HRD+KP N L+ LG QV DFG++
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG----QVKXCDFGIS 184
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
M+ R +F KIGSG FG ++ AIK + K + + L ++
Sbjct: 3 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH 62
Query: 61 ---GTGIPNLRWFGVEGDYNVLVID---LLGPSLEDLFNFCSRKLS------LKTVLMLA 108
G +R+F + + ++I G SL D + R +S LK +L+
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL-- 120
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLM 135
Q+ + ++HS S +H DIKP N +
Sbjct: 121 -QVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
M+ R +F KIGSG FG ++ AIK + K + + L ++
Sbjct: 3 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH 62
Query: 61 ---GTGIPNLRWFGVEGDYNVLVID---LLGPSLEDLFNFCSRKLS------LKTVLMLA 108
G +R+F + + ++I G SL D + R +S LK +L+
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL-- 120
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLM 135
Q+ + ++HS S +H DIKP N +
Sbjct: 121 -QVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
M+ R +F KIGSG FG ++ AIK + K + + L ++
Sbjct: 5 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH 64
Query: 61 ---GTGIPNLRWFGVEGDYNVLVID---LLGPSLEDLFNFCSRKLS------LKTVLMLA 108
G +R+F + + ++I G SL D + R +S LK +L+
Sbjct: 65 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL-- 122
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLM 135
Q+ + ++HS S +H DIKP N +
Sbjct: 123 -QVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQG 60
M+ R +F KIGSG FG ++ AIK + K + + L ++
Sbjct: 1 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH 60
Query: 61 ---GTGIPNLRWFGVEGDYNVLVID---LLGPSLEDLFNFCSRKLS------LKTVLMLA 108
G +R+F + + ++I G SL D + R +S LK +L+
Sbjct: 61 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL-- 118
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLM 135
Q+ + ++HS S +H DIKP N +
Sbjct: 119 -QVGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 82/211 (38%), Gaps = 26/211 (12%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKL---NVKTKHPQLQYEAKLYKILQGGTGIPNLRWFG 71
+G GSFG++ L T+E A+K+ +V + ++ ++L +P F
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL----ALPGKPPFL 404
Query: 72 VEGDYNVLVIDLLGPSLE-----DLFNFCSRKLSLKT--VLMLADQMINRVEFVHSKSFL 124
+ +D L +E DL + K + A ++ + F+ SK +
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGII 464
Query: 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGTARYASMNT 183
+RD+K DN ++ + I DFG+ K D T K GT Y +
Sbjct: 465 YRDLKLDNVMLD---SEGHIKIADFGMCKENIWDGVT--------TKXFCGTPDYIAPEI 513
Query: 184 HLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
+ D + G +L L G P++G
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMN 182
+HRD+KP N L+ ++ + DFG++ + D+ + + GT Y +
Sbjct: 136 IMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVGTRSYMAPE 183
Query: 183 THLGIEQSRRDDLESLGYVLMYFLRGSLP 211
G S + D+ S+G L+ G P
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLR 68
+G G F + + ++ T E A K+ K+ + ++ E +++ L +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 87
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHR 126
F + D+ +V++L L R+ +L Q++ +++H +HR
Sbjct: 88 GFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 127 DIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG 186
D+K N + +V I DFGLA + + K L GT Y +
Sbjct: 146 DLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK-------KTLCGTPNYIAPEVLSK 195
Query: 187 IEQSRRDDLESLGYVLMYFLRGSLPWQ 213
S D+ S+G ++ L G P++
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIP 65
K + R++G GSFG +Y G +E ++ +KT + ++ + L + +
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMK 77
Query: 66 N------LRWFGV--EGDYNVLVIDL------------LGPSLEDLFNFCSRKLSLKTVL 105
+R GV +G +++++L L P +E+ N SL ++
Sbjct: 78 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN--NPVLAPPSLSKMI 135
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+A ++ + + ++++ F+HRD+ N ++ V I DFG+ + +T
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIXET 185
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 12/99 (12%)
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR-YRDTATHQHIPYRENKNLTGT 175
F+ SK ++RD+K DN ++ + I DFG+ K D T K GT
Sbjct: 136 FLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKENIWDGVT--------TKXFCGT 184
Query: 176 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
Y + + D + G +L L G P++G
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLR 68
+G G F + + ++ T E A K+ K+ + ++ E +++ L +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 83
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHR 126
F + D+ +V++L L R+ +L Q++ +++H +HR
Sbjct: 84 GFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 127 DIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG 186
D+K N + +V I DFGLA + + K L GT Y +
Sbjct: 142 DLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK-------KTLCGTPNYIAPEVLSK 191
Query: 187 IEQSRRDDLESLGYVLMYFLRGSLPWQ 213
S D+ S+G ++ L G P++
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLR 68
+G G F + + ++ T E A K+ K+ + ++ E +++ L +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 83
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHR 126
F + D+ +V++L L R+ +L Q++ +++H +HR
Sbjct: 84 GFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 127 DIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG 186
D+K N + +V I DFGLA + + K L GT Y +
Sbjct: 142 DLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK-------KTLCGTPNYIAPEVLSK 191
Query: 187 IEQSRRDDLESLGYVLMYFLRGSLPWQ 213
S D+ S+G ++ L G P++
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 8 KFRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
K + R++G GSFG +Y G +E ++ +KT + ++ + L + +
Sbjct: 11 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMKE 69
Query: 67 ------LRWFGV--EGDYNVLVIDL------------LGPSLEDLFNFCSRKLSLKTVLM 106
+R GV +G +++++L L P +E+ N SL ++
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN--NPVLAPPSLSKMIQ 127
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+A ++ + + ++++ F+HRD+ N ++ V I DFG+ + +T
Sbjct: 128 MAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIXET 176
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIP 65
K + R++G GSFG +Y G +E ++ +KT + ++ + L + +
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMK 83
Query: 66 N------LRWFGV--EGDYNVLVIDL------------LGPSLEDLFNFCSRKLSLKTVL 105
+R GV +G +++++L L P +E+ N SL ++
Sbjct: 84 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN--NPVLAPPSLSKMI 141
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+A ++ + + ++++ F+HRD+ N ++ V I DFG+ + +T
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYET 191
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 36 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 80
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 81 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 137
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++++ SK F+HRD+ N ++ V + DFGLA+ D Y
Sbjct: 138 LQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------YYS 188
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 189 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNV------KTKHPQLQYEAKLYKILQGGTGIPNL 67
++G G+FG + G +++ + + V K ++ EA++ L +
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV--- 73
Query: 68 RWFGV-EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLH 125
R GV + + +LV+++ G F R+ + + V L Q+ ++++ K+F+H
Sbjct: 74 RLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 126 RDIKPDNFLMGLGRRANQVY--IIDFGLAK 153
RD+ N L+ N+ Y I DFGL+K
Sbjct: 134 RDLAARNVLL-----VNRHYAKISDFGLSK 158
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 33 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 77
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 78 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 134
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++++ SK F+HRD+ N ++ V + DFGLA+ D Y
Sbjct: 135 LQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------YYS 185
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 186 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 38 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 82
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 83 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 139
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++F+ SK F+HRD+ N ++ V + DFGLA+ D +
Sbjct: 140 LQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------FDS 190
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 39 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 83
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 84 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 140
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++F+ SK F+HRD+ N ++ V + DFGLA+ D +
Sbjct: 141 LQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------FDS 191
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 192 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 38 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 82
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 83 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 139
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++++ SK F+HRD+ N ++ V + DFGLA+ D Y
Sbjct: 140 LQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------YYS 190
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 37 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 81
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 82 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 138
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++++ SK F+HRD+ N ++ V + DFGLA+ D Y
Sbjct: 139 LQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------YYS 189
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 190 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 39 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 83
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 84 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 140
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++F+ SK F+HRD+ N ++ V + DFGLA+ D +
Sbjct: 141 LQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMLDKE------FDS 191
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 192 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 97 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 141
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 142 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 198
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++F+ SK F+HRD+ N ++ V + DFGLA+ D +
Sbjct: 199 LQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------FDS 249
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIP 65
K + R++G GSFG +Y G +E ++ +KT + ++ + L + +
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMK 77
Query: 66 N------LRWFGV--EGDYNVLVIDL------------LGPSLEDLFNFCSRKLSLKTVL 105
+R GV +G +++++L L P +E+ N SL ++
Sbjct: 78 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN--NPVLAPPSLSKMI 135
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+A ++ + + ++++ F+HRD+ N ++ V I DFG+ + +T
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYET 185
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIP 65
K + R++G GSFG +Y G +E ++ +KT + ++ + L + +
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMK 76
Query: 66 N------LRWFGV--EGDYNVLVIDL------------LGPSLEDLFNFCSRKLSLKTVL 105
+R GV +G +++++L L P +E+ N SL ++
Sbjct: 77 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN--NPVLAPPSLSKMI 134
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+A ++ + + ++++ F+HRD+ N ++ V I DFG+ + +T
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYET 184
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 36 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 80
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 81 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 137
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++F+ SK F+HRD+ N ++ V + DFGLA+ D +
Sbjct: 138 LQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------FDS 188
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 189 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 38 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 82
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 83 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 139
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++F+ SK F+HRD+ N ++ V + DFGLA+ D +
Sbjct: 140 LQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------FDS 190
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
K + R++G GSFG +Y G +E ++ +KT + ++ + L + +
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMKE 77
Query: 67 ------LRWFGV--EGDYNVLVIDL------------LGPSLEDLFNFCSRKLSLKTVLM 106
+R GV +G +++++L L P +E+ N SL ++
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN--NPVLAPPSLSKMIQ 135
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+A ++ + + ++++ F+HRD+ N ++ V I DFG+ + +T
Sbjct: 136 MAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYET 184
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIP 65
K + R++G GSFG +Y G +E ++ +KT + ++ + L + +
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMK 74
Query: 66 N------LRWFGV--EGDYNVLVIDL------------LGPSLEDLFNFCSRKLSLKTVL 105
+R GV +G +++++L L P +E+ N SL ++
Sbjct: 75 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN--NPVLAPPSLSKMI 132
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+A ++ + + ++++ F+HRD+ N ++ V I DFG+ + +T
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYET 182
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 43 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 87
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 88 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 144
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++F+ SK F+HRD+ N ++ V + DFGLA+ D +
Sbjct: 145 LQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------FDS 195
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 196 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 30 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 74
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 75 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 131
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++++ SK F+HRD+ N ++ V + DFGLA+ D Y
Sbjct: 132 LQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------YYS 182
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 183 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 7 NKFRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIP 65
K + R++G GSFG +Y G +E ++ +KT + ++ + L + +
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMK 70
Query: 66 N------LRWFGV--EGDYNVLVIDL------------LGPSLEDLFNFCSRKLSLKTVL 105
+R GV +G +++++L L P +E+ N SL ++
Sbjct: 71 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN--NPVLAPPSLSKMI 128
Query: 106 MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+A ++ + + ++++ F+HRD+ N ++ V I DFG+ + +T
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYET 178
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 38 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 82
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 83 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 139
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++++ SK F+HRD+ N ++ V + DFGLA+ D Y
Sbjct: 140 LQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------YYS 190
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 35 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 79
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 80 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 136
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++++ SK F+HRD+ N ++ V + DFGLA+ D Y
Sbjct: 137 LQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------YYS 187
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLR 68
+G G F + + ++ T E A K+ K+ + ++ E +++ L +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 107
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHR 126
F + D+ +V++L L R+ +L Q++ +++H +HR
Sbjct: 108 GFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 127 DIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG 186
D+K N + +V I DFGLA + + K L GT Y +
Sbjct: 166 DLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK-------KVLCGTPNYIAPEVLSK 215
Query: 187 IEQSRRDDLESLGYVLMYFLRGSLPWQ 213
S D+ S+G ++ L G P++
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 8 KFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
K + R++G GSFG +Y G +E ++ +KT + ++ + L + +
Sbjct: 48 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEASVMKE 106
Query: 67 ------LRWFGV--EGDYNVLVIDL------------LGPSLEDLFNFCSRKLSLKTVLM 106
+R GV +G +++++L L P +E+ N SL ++
Sbjct: 107 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN--NPVLAPPSLSKMIQ 164
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
+A ++ + + ++++ F+HRD+ N ++ V I DFG+ + +T
Sbjct: 165 MAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYET 213
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 56 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 100
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 101 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 157
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++++ SK F+HRD+ N ++ V + DFGLA+ D Y
Sbjct: 158 LQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------YYS 208
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 209 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 57/228 (25%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74
IG G FG +Y GT + N+ I VK+ L T I + F EG
Sbjct: 57 IGRGHFGCVYHGT-LLDNDGKKIHCAVKS--------------LNRITDIGEVSQFLTEG 101
Query: 75 DYNVLVIDLLGPSLEDLFNFCSRK--------------------------LSLKTVLMLA 108
+++ D P++ L C R ++K ++
Sbjct: 102 ---IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 158
Query: 109 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168
Q+ ++++ SK F+HRD+ N ++ V + DFGLA+ D Y
Sbjct: 159 LQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE------YYS 209
Query: 169 NKNLTGT---ARYASMNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPW 212
N TG ++ ++ + + + + D+ S G +L + RG+ P+
Sbjct: 210 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLR 68
+G G F + + ++ T E A K+ K+ + ++ E +++ L +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 105
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHR 126
F + D+ +V++L L R+ +L Q++ +++H +HR
Sbjct: 106 GFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 127 DIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG 186
D+K N + +V I DFGLA + + K L GT Y +
Sbjct: 164 DLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK-------KVLCGTPNYIAPEVLSK 213
Query: 187 IEQSRRDDLESLGYVLMYFLRGSLPWQ 213
S D+ S+G ++ L G P++
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNV------KTKHPQLQYEAKLYKILQGGTGIPNL 67
++G G+FG + G +++ + + V K ++ EA++ L +
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV--- 399
Query: 68 RWFGV-EGDYNVLVIDLLGPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLH 125
R GV + + +LV+++ G F R+ + + V L Q+ ++++ K+F+H
Sbjct: 400 RLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 126 RDIKPDNFLMGLGRRANQVY--IIDFGLAK 153
R++ N L+ N+ Y I DFGL+K
Sbjct: 460 RNLAARNVLL-----VNRHYAKISDFGLSK 484
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 VGNK-FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGT 62
+G K RL K+G GSFG + G + + + V++ + Q EA + ++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVN 67
Query: 63 GIPNL------RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ +L R +GV + ++ L P SL D L T+ A Q+
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ ++ SK F+HRD+ N L+ + V I DFGL +
Sbjct: 128 MGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMR 163
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 VGNK-FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGT 62
+G K RL K+G GSFG + G + + + V++ + Q EA + ++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVN 73
Query: 63 GIPNL------RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ +L R +GV + ++ L P SL D L T+ A Q+
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ ++ SK F+HRD+ N L+ + V I DFGL +
Sbjct: 134 MGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMR 169
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGT- 62
+ R + +GSG FG ++ G I E + I + +K K + ++A +L G+
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 63 -GIPNLRWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+R G+ ++ ++ P SL D L + +L Q+ + ++
Sbjct: 91 DHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+HR++ N L+ + +QV + DFG+A + + Y E K T A
Sbjct: 151 EHGMVHRNLAARNVLL---KSPSQVQVADFGVADLL--PPDDKQLLYSEAK--TPIKWMA 203
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLK 216
+ H G + + + D+ S G + LM F G+ P+ GL+
Sbjct: 204 LESIHFG-KYTHQSDVWSYGVTVWELMTF--GAEPYAGLR 240
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 97 RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
R L++ ++ A Q+ ++++ S +HRD+ N L+ GR+ I DFGL++
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMK---ISDFGLSR 198
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 VGNK-FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGT 62
+G K RL K+G GSFG + G + + + V++ + Q EA + ++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVN 73
Query: 63 GIPNL------RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ +L R +GV + ++ L P SL D L T+ A Q+
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ ++ SK F+HRD+ N L+ + V I DFGL +
Sbjct: 134 MGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMR 169
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 93 NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152
N + LS + +L A + ++++ K F+HRD+ N L+G A I DFGL+
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK---IADFGLS 189
Query: 153 K 153
+
Sbjct: 190 R 190
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 102 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161
+ +L + + +E++ SK FLHRD+ N L+ V + DFGL++ D
Sbjct: 105 QQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDE-- 159
Query: 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY--FLRGSLPWQ 213
Y ++ R++ + + S + D+ + G VLM+ + G +P++
Sbjct: 160 ----YTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFG-VLMWEIYSLGKMPYE 208
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 VGNK-FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGT 62
+G K RL K+G GSFG + G + + + V++ + Q EA + ++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVN 67
Query: 63 GIPNL------RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ +L R +GV + ++ L P SL D L T+ A Q+
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ ++ SK F+HRD+ N L+ + V I DFGL +
Sbjct: 128 MGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMR 163
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 93 NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152
N + LS + +L A + ++++ K F+HRD+ N L+G A I DFGL+
Sbjct: 123 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK---IADFGLS 179
Query: 153 K 153
+
Sbjct: 180 R 180
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 VGNK-FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGT 62
+G K RL K+G GSFG + G + + + V++ + Q EA + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVN 63
Query: 63 GIPNL------RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ +L R +GV + ++ L P SL D L T+ A Q+
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ ++ SK F+HRD+ N L+ + V I DFGL +
Sbjct: 124 MGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMR 159
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLR 68
+G G F + + ++ T E A K+ K+ + ++ E +++ L +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 81
Query: 69 WFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSL--KTVLMLADQMINRVEFVHSKSFLHR 126
F + D+ +V++L L R+ +L Q++ +++H +HR
Sbjct: 82 GFFEDNDFVFVVLELC--RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 127 DIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG 186
D+K N + +V I DFGLA + + K L GT Y +
Sbjct: 140 DLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK-------KVLCGTPNYIAPEVLSK 189
Query: 187 IEQSRRDDLESLGYVLMYFLRGSLPWQ 213
S D+ S+G ++ L G P++
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 VGNK-FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGT 62
+G K RL K+G GSFG + G + + + V++ + Q EA + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVN 63
Query: 63 GIPNL------RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ +L R +GV + ++ L P SL D L T+ A Q+
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ ++ SK F+HRD+ N L+ + V I DFGL +
Sbjct: 124 MGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMR 159
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGT- 62
+ R + +GSG FG ++ G I E + I + +K K + ++A +L G+
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 63 -GIPNLRWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119
+R G+ ++ ++ P SL D L + +L Q+ + ++
Sbjct: 73 DHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYA 179
+HR++ N L+ + +QV + DFG+A + + Y E K T A
Sbjct: 133 EHGMVHRNLAARNVLL---KSPSQVQVADFGVADLL--PPDDKQLLYSEAK--TPIKWMA 185
Query: 180 SMNTHLGIEQSRRDDLESLG---YVLMYFLRGSLPWQGLK 216
+ H G + + + D+ S G + LM F G+ P+ GL+
Sbjct: 186 LESIHFG-KYTHQSDVWSYGVTVWELMTF--GAEPYAGLR 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 VGNK-FRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGT 62
+G K RL K+G GSFG + G + + + V++ + Q EA + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVN 63
Query: 63 GIPNL------RWFGVEGDYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINR 114
+ +L R +GV + ++ L P SL D L T+ A Q+
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 115 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153
+ ++ SK F+HRD+ N L+ + V I DFGL +
Sbjct: 124 MGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMR 159
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 12/99 (12%)
Query: 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY-RDTATHQHIPYRENKNLTGT 175
F+H + ++RD+K DN ++ + I DFG+ K + D T + GT
Sbjct: 135 FLHKRGIIYRDLKLDNVMLD---SEGHIKIADFGMCKEHMMDGVT--------TREFCGT 183
Query: 176 ARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214
Y + + D + G +L L G P+ G
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN 66
+F LGR +G G FG + ++ + +K+ VK + + + + L+ +
Sbjct: 23 QQFTLGRMLGKGEFGSVR-EAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE 81
Query: 67 L------RWFGV------EGDYNVLVIDLLGPSLEDL--FNFCSR------KLSLKTVLM 106
+ GV +G + ++ L DL F SR L L+T++
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 107 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154
+ +E++ S++F+HRD+ N ++ V + DFGL+++
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLA---EDMTVCVADFGLSRK 186
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 16/181 (8%)
Query: 99 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158
LS L +A Q+ + ++ + F+HRD+ N L+G V I DFGL+ R+
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADFGLS---RNI 224
Query: 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM-YFLRGSLPWQGLKA 217
+ + Y+ + N R+ + + D+ + G VL F G P+ G+
Sbjct: 225 YSADY--YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282
Query: 218 GTXXXXXXXXXXXXVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277
+I A P E + C S D+P + + R+ + +
Sbjct: 283 EEVIYYVR-------DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335
Query: 278 R 278
R
Sbjct: 336 R 336
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,460,146
Number of Sequences: 62578
Number of extensions: 453270
Number of successful extensions: 2700
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 301
Number of HSP's that attempted gapping in prelim test: 1115
Number of HSP's gapped (non-prelim): 1179
length of query: 473
length of database: 14,973,337
effective HSP length: 102
effective length of query: 371
effective length of database: 8,590,381
effective search space: 3187031351
effective search space used: 3187031351
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)