Query 011988
Match_columns 473
No_of_seqs 557 out of 2178
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 07:25:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011988.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011988hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1163 Casein kinase (serine/ 100.0 4.3E-59 9.3E-64 425.1 21.2 293 3-295 11-304 (341)
2 KOG1165 Casein kinase (serine/ 100.0 1.7E-57 3.7E-62 431.4 23.9 290 4-293 25-317 (449)
3 KOG0581 Mitogen-activated prot 100.0 8.7E-50 1.9E-54 385.8 18.7 254 7-280 79-341 (364)
4 KOG0592 3-phosphoinositide-dep 100.0 8.9E-48 1.9E-52 385.5 25.4 268 5-294 71-351 (604)
5 KOG0615 Serine/threonine prote 100.0 9.7E-49 2.1E-53 381.2 16.6 259 4-278 169-441 (475)
6 KOG0575 Polo-like serine/threo 100.0 1.2E-47 2.7E-52 390.2 25.2 255 7-284 18-279 (592)
7 KOG0595 Serine/threonine-prote 100.0 7.3E-48 1.6E-52 375.4 20.6 250 4-268 7-265 (429)
8 KOG0598 Ribosomal protein S6 k 100.0 5.9E-47 1.3E-51 366.0 20.4 264 6-298 24-298 (357)
9 KOG0591 NIMA (never in mitosis 100.0 1.5E-48 3.2E-53 363.2 8.5 243 7-265 19-275 (375)
10 KOG0593 Predicted protein kina 100.0 1.6E-46 3.5E-51 352.8 15.3 252 7-269 2-282 (396)
11 KOG0192 Tyrosine kinase specif 100.0 3.1E-45 6.6E-50 368.7 22.9 255 7-279 41-307 (362)
12 KOG0661 MAPK related serine/th 100.0 1.9E-46 4.2E-51 370.8 12.9 263 4-280 7-297 (538)
13 KOG0198 MEKK and related serin 100.0 1.4E-45 3.1E-50 361.2 17.6 259 7-280 17-282 (313)
14 KOG0600 Cdc2-related protein k 100.0 2.1E-45 4.6E-50 365.8 18.3 258 3-269 113-398 (560)
15 KOG0583 Serine/threonine prote 100.0 1.3E-43 2.9E-48 359.4 27.0 246 4-269 14-273 (370)
16 KOG0616 cAMP-dependent protein 100.0 3.6E-44 7.8E-49 336.3 18.4 268 5-300 42-316 (355)
17 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.3E-43 5E-48 355.5 23.5 260 5-278 5-337 (338)
18 KOG0197 Tyrosine kinases [Sign 100.0 4.3E-44 9.3E-49 360.8 17.8 252 9-278 208-464 (468)
19 KOG0597 Serine-threonine prote 100.0 2.1E-44 4.5E-49 361.5 15.2 251 7-280 2-257 (808)
20 KOG0605 NDR and related serine 100.0 1.7E-43 3.7E-48 355.0 21.0 272 6-294 140-458 (550)
21 KOG0694 Serine/threonine prote 100.0 4.2E-43 9.2E-48 360.9 21.6 267 5-301 366-644 (694)
22 KOG0578 p21-activated serine/t 100.0 1.3E-43 2.7E-48 358.4 16.4 253 6-279 272-528 (550)
23 KOG0663 Protein kinase PITSLRE 100.0 3.9E-43 8.5E-48 333.9 18.4 252 6-268 75-358 (419)
24 KOG0659 Cdk activating kinase 100.0 5.7E-43 1.2E-47 323.9 18.3 252 7-269 2-279 (318)
25 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.2E-42 1.3E-46 337.6 25.8 252 7-269 5-283 (288)
26 KOG0588 Serine/threonine prote 100.0 1.6E-42 3.5E-47 354.2 20.4 251 6-280 11-269 (786)
27 cd05631 STKc_GRK4 Catalytic do 100.0 9E-42 1.9E-46 335.9 24.8 265 8-295 1-275 (285)
28 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.2E-41 2.6E-46 342.3 26.1 254 8-269 1-288 (338)
29 KOG0201 Serine/threonine prote 100.0 1.2E-43 2.7E-48 348.3 10.5 254 6-281 12-270 (467)
30 cd07848 STKc_CDKL5 Catalytic d 100.0 1.8E-41 4E-46 333.1 25.3 253 7-269 1-282 (287)
31 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.8E-42 1.5E-46 344.4 22.5 245 7-269 1-255 (333)
32 PTZ00263 protein kinase A cata 100.0 2.3E-41 5E-46 340.2 26.3 237 6-265 17-260 (329)
33 KOG0667 Dual-specificity tyros 100.0 3E-42 6.6E-47 354.3 20.0 204 5-219 184-395 (586)
34 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.7E-41 1E-45 333.6 27.9 251 6-269 4-286 (303)
35 cd05587 STKc_cPKC Catalytic do 100.0 1.7E-41 3.6E-46 340.3 24.9 239 8-265 1-246 (324)
36 cd05612 STKc_PRKX_like Catalyt 100.0 1.7E-41 3.7E-46 335.1 24.4 235 7-264 1-242 (291)
37 PHA02882 putative serine/threo 100.0 4.5E-41 9.8E-46 332.6 27.4 263 3-272 8-293 (294)
38 PTZ00036 glycogen synthase kin 100.0 3E-41 6.4E-46 352.5 27.3 254 5-269 64-349 (440)
39 cd05096 PTKc_DDR1 Catalytic do 100.0 2.5E-41 5.5E-46 335.5 25.1 260 5-273 3-303 (304)
40 KOG0658 Glycogen synthase kina 100.0 1.8E-42 3.8E-47 334.4 16.0 252 7-269 24-304 (364)
41 KOG0582 Ste20-like serine/thre 100.0 3.1E-41 6.8E-46 331.6 25.1 265 4-280 23-299 (516)
42 KOG0660 Mitogen-activated prot 100.0 5.8E-42 1.3E-46 330.2 18.8 262 5-278 20-314 (359)
43 PTZ00284 protein kinase; Provi 100.0 2.3E-41 4.9E-46 356.2 24.7 259 6-278 128-442 (467)
44 cd07862 STKc_CDK6 Catalytic do 100.0 7.1E-41 1.5E-45 329.5 26.1 249 7-269 1-285 (290)
45 PHA03212 serine/threonine kina 100.0 7.1E-41 1.5E-45 344.5 26.5 250 6-269 91-374 (391)
46 cd05614 STKc_MSK2_N N-terminal 100.0 4E-41 8.6E-46 338.5 24.0 253 8-275 1-268 (332)
47 cd05571 STKc_PKB Catalytic dom 100.0 2.1E-41 4.6E-46 339.6 21.8 236 13-268 1-248 (323)
48 cd05616 STKc_cPKC_beta Catalyt 100.0 6.1E-41 1.3E-45 336.1 24.9 239 8-265 1-246 (323)
49 cd05106 PTKc_CSF-1R Catalytic 100.0 4.2E-41 9E-46 344.4 24.1 256 7-276 38-373 (374)
50 KOG0589 Serine/threonine prote 100.0 6.1E-42 1.3E-46 344.0 15.5 249 6-271 3-258 (426)
51 cd05585 STKc_YPK1_like Catalyt 100.0 3E-41 6.5E-46 336.7 20.2 242 15-276 1-249 (312)
52 cd07876 STKc_JNK2 Catalytic do 100.0 1.3E-40 2.8E-45 338.6 24.8 252 4-269 18-313 (359)
53 KOG0193 Serine/threonine prote 100.0 5.6E-42 1.2E-46 347.6 14.4 256 6-277 391-655 (678)
54 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.9E-40 6.4E-45 321.6 26.1 253 6-275 4-265 (266)
55 KOG1989 ARK protein kinase fam 100.0 9.7E-41 2.1E-45 353.1 24.3 261 7-280 37-316 (738)
56 cd05589 STKc_PKN Catalytic dom 100.0 1.9E-40 4E-45 332.8 25.3 237 9-265 1-246 (324)
57 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.2E-40 6.8E-45 328.5 26.7 253 6-269 5-284 (309)
58 cd05615 STKc_cPKC_alpha Cataly 100.0 2.1E-40 4.6E-45 332.4 25.6 240 8-266 1-247 (323)
59 cd06649 PKc_MEK2 Catalytic dom 100.0 3.1E-40 6.8E-45 332.2 26.4 254 5-279 3-306 (331)
60 cd05592 STKc_nPKC_theta_delta 100.0 2.5E-40 5.4E-45 330.8 25.5 235 13-266 1-242 (316)
61 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.7E-41 1E-45 340.0 20.5 254 7-270 1-284 (350)
62 cd05601 STKc_CRIK Catalytic do 100.0 8.6E-41 1.9E-45 335.8 22.0 247 7-268 1-260 (330)
63 cd05104 PTKc_Kit Catalytic dom 100.0 1.4E-40 3.1E-45 340.5 23.8 255 7-275 35-374 (375)
64 cd07863 STKc_CDK4 Catalytic do 100.0 4.5E-40 9.7E-45 323.3 26.4 251 8-269 1-283 (288)
65 cd06650 PKc_MEK1 Catalytic dom 100.0 2.3E-40 5E-45 333.5 24.8 270 5-291 3-317 (333)
66 KOG4279 Serine/threonine prote 100.0 3.5E-41 7.6E-46 344.1 18.8 250 13-280 581-838 (1226)
67 KOG0585 Ca2+/calmodulin-depend 100.0 2.2E-41 4.7E-46 334.6 16.6 253 4-269 94-370 (576)
68 cd05620 STKc_nPKC_delta Cataly 100.0 3E-40 6.6E-45 330.2 25.2 235 13-266 1-242 (316)
69 cd05628 STKc_NDR1 Catalytic do 100.0 2.4E-40 5.1E-45 337.3 24.9 267 7-293 1-305 (363)
70 PTZ00283 serine/threonine prot 100.0 1.8E-40 3.9E-45 351.1 24.7 252 4-270 29-296 (496)
71 KOG0032 Ca2+/calmodulin-depend 100.0 1.8E-40 3.9E-45 336.7 23.5 253 4-270 32-292 (382)
72 cd05595 STKc_PKB_beta Catalyti 100.0 1.6E-40 3.5E-45 333.2 22.9 231 13-263 1-238 (323)
73 PTZ00426 cAMP-dependent protei 100.0 2.9E-40 6.4E-45 333.8 25.0 241 5-268 28-281 (340)
74 cd05591 STKc_nPKC_epsilon Cata 100.0 1.8E-40 3.8E-45 332.5 23.1 233 13-264 1-240 (321)
75 cd05599 STKc_NDR_like Catalyti 100.0 1.1E-40 2.5E-45 339.4 22.0 260 7-276 1-298 (364)
76 cd05054 PTKc_VEGFR Catalytic d 100.0 2.4E-40 5.2E-45 334.1 23.9 259 6-278 6-336 (337)
77 cd05590 STKc_nPKC_eta Catalyti 100.0 2.5E-40 5.5E-45 331.4 23.8 236 13-267 1-243 (320)
78 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-40 3.6E-45 333.7 22.5 263 13-295 1-274 (327)
79 cd05593 STKc_PKB_gamma Catalyt 100.0 2E-40 4.3E-45 333.3 23.0 237 13-269 1-249 (328)
80 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-40 3E-45 321.4 20.6 253 8-270 12-301 (323)
81 cd05602 STKc_SGK1 Catalytic do 100.0 4E-40 8.8E-45 330.5 24.5 254 13-293 1-263 (325)
82 KOG0596 Dual specificity; seri 100.0 1.9E-41 4E-46 340.1 14.6 249 6-268 360-624 (677)
83 cd05629 STKc_NDR_like_fungal C 100.0 1.4E-40 3E-45 340.7 21.4 252 7-268 1-302 (377)
84 cd05618 STKc_aPKC_iota Catalyt 100.0 4.7E-40 1E-44 330.7 24.9 260 13-295 1-276 (329)
85 cd05048 PTKc_Ror Catalytic Dom 100.0 3E-40 6.5E-45 323.7 22.5 253 6-274 4-282 (283)
86 cd05598 STKc_LATS Catalytic do 100.0 4.4E-40 9.6E-45 336.8 24.4 252 7-268 1-298 (376)
87 PLN00034 mitogen-activated pro 100.0 2.2E-40 4.8E-45 336.2 21.8 245 6-270 73-327 (353)
88 cd05597 STKc_DMPK_like Catalyt 100.0 5.1E-40 1.1E-44 330.7 24.2 263 7-292 1-277 (331)
89 cd05588 STKc_aPKC Catalytic do 100.0 1.7E-40 3.8E-45 333.8 20.7 258 13-293 1-274 (329)
90 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.3E-40 5E-45 334.5 21.6 251 4-269 12-296 (343)
91 cd05052 PTKc_Abl Catalytic dom 100.0 6.5E-40 1.4E-44 318.3 23.9 254 6-276 5-263 (263)
92 cd05608 STKc_GRK1 Catalytic do 100.0 7.1E-40 1.5E-44 321.6 24.3 246 15-276 1-259 (280)
93 cd05575 STKc_SGK Catalytic dom 100.0 9.5E-40 2.1E-44 327.5 25.7 234 13-266 1-242 (323)
94 cd07875 STKc_JNK1 Catalytic do 100.0 6.2E-40 1.4E-44 334.2 24.7 247 5-268 22-315 (364)
95 PHA03207 serine/threonine kina 100.0 8.7E-40 1.9E-44 336.7 25.9 255 4-270 89-374 (392)
96 cd05605 STKc_GRK4_like Catalyt 100.0 7.4E-40 1.6E-44 322.3 24.3 261 8-294 1-274 (285)
97 cd05109 PTKc_HER2 Catalytic do 100.0 1E-39 2.3E-44 319.6 24.9 260 1-277 1-270 (279)
98 cd07874 STKc_JNK3 Catalytic do 100.0 7E-40 1.5E-44 332.6 24.5 252 4-269 14-309 (355)
99 cd05105 PTKc_PDGFR_alpha Catal 100.0 8.9E-40 1.9E-44 337.0 25.5 257 6-276 36-398 (400)
100 cd05596 STKc_ROCK Catalytic do 100.0 4.7E-40 1E-44 336.2 23.2 247 6-268 42-301 (370)
101 KOG0610 Putative serine/threon 100.0 2E-40 4.3E-45 323.6 19.3 267 7-293 77-404 (459)
102 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-39 2.4E-44 328.3 25.5 249 7-268 1-263 (332)
103 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-39 2.3E-44 334.7 25.7 254 7-269 1-303 (381)
104 cd07853 STKc_NLK Catalytic dom 100.0 6.3E-40 1.4E-44 335.2 23.7 257 8-277 1-291 (372)
105 cd05619 STKc_nPKC_theta Cataly 100.0 9.8E-40 2.1E-44 326.6 24.5 235 13-266 1-242 (316)
106 PHA02988 hypothetical protein; 100.0 1.4E-39 3E-44 320.4 25.1 242 13-276 26-280 (283)
107 cd05594 STKc_PKB_alpha Catalyt 100.0 2.7E-40 5.8E-45 331.7 20.4 237 13-269 1-250 (325)
108 cd05570 STKc_PKC Catalytic dom 100.0 8.7E-40 1.9E-44 327.2 24.0 234 13-265 1-241 (318)
109 KOG1164 Casein kinase (serine/ 100.0 5.1E-39 1.1E-43 322.3 29.5 288 4-294 14-316 (322)
110 KOG0033 Ca2+/calmodulin-depend 100.0 4.9E-42 1.1E-46 314.0 6.8 260 3-279 7-272 (355)
111 cd05624 STKc_MRCK_beta Catalyt 100.0 5.8E-40 1.2E-44 330.3 21.5 266 7-293 1-278 (331)
112 cd05627 STKc_NDR2 Catalytic do 100.0 5.3E-40 1.2E-44 334.3 21.4 270 7-293 1-305 (360)
113 cd05625 STKc_LATS1 Catalytic d 100.0 6E-40 1.3E-44 336.5 21.8 258 7-274 1-305 (382)
114 KOG0611 Predicted serine/threo 100.0 9.3E-41 2E-45 323.8 14.4 244 5-270 51-302 (668)
115 KOG4717 Serine/threonine prote 100.0 2.7E-40 5.9E-45 328.5 17.8 249 2-269 13-268 (864)
116 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.6E-39 3.5E-44 318.1 23.1 256 5-273 4-276 (277)
117 cd05089 PTKc_Tie1 Catalytic do 100.0 3.2E-39 6.9E-44 319.5 25.5 256 7-280 2-280 (297)
118 PTZ00267 NIMA-related protein 100.0 2.4E-39 5.2E-44 341.6 26.1 248 7-270 67-322 (478)
119 cd05582 STKc_RSK_N N-terminal 100.0 4.1E-40 8.8E-45 329.3 19.0 255 12-293 1-266 (318)
120 KOG4721 Serine/threonine prote 100.0 6.1E-41 1.3E-45 336.4 13.0 238 11-273 128-366 (904)
121 cd05071 PTKc_Src Catalytic dom 100.0 3.1E-39 6.8E-44 313.6 24.4 253 5-276 4-261 (262)
122 cd05093 PTKc_TrkB Catalytic do 100.0 3.7E-39 8E-44 317.5 25.3 257 6-278 4-282 (288)
123 cd05584 STKc_p70S6K Catalytic 100.0 1.8E-39 4E-44 325.5 23.5 237 12-268 1-253 (323)
124 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.7E-39 1E-43 318.8 26.0 254 6-270 5-285 (301)
125 KOG1026 Nerve growth factor re 100.0 2E-40 4.3E-45 349.3 17.0 257 7-279 486-766 (774)
126 cd05603 STKc_SGK2 Catalytic do 100.0 2.3E-39 4.9E-44 324.3 23.9 241 13-273 1-250 (321)
127 cd05098 PTKc_FGFR1 Catalytic d 100.0 4E-39 8.7E-44 320.3 25.4 260 6-280 17-304 (307)
128 cd05108 PTKc_EGFR Catalytic do 100.0 3.4E-39 7.5E-44 322.2 24.9 256 5-277 5-270 (316)
129 cd05072 PTKc_Lyn Catalytic dom 100.0 2.4E-39 5.2E-44 313.5 23.0 251 6-274 5-260 (261)
130 cd05062 PTKc_IGF-1R Catalytic 100.0 2.7E-39 5.8E-44 316.4 23.4 254 4-273 3-276 (277)
131 cd05621 STKc_ROCK2 Catalytic d 100.0 1.4E-39 2.9E-44 332.7 22.1 253 5-276 41-306 (370)
132 PHA03211 serine/threonine kina 100.0 2.5E-39 5.3E-44 338.3 24.4 254 4-270 166-454 (461)
133 PTZ00266 NIMA-related protein 100.0 2.1E-38 4.6E-43 348.2 32.7 252 3-269 9-293 (1021)
134 cd05607 STKc_GRK7 Catalytic do 100.0 1.7E-39 3.8E-44 318.3 21.7 239 15-269 1-248 (277)
135 cd07868 STKc_CDK8 Catalytic do 100.0 6.7E-39 1.4E-43 319.8 26.3 255 12-270 6-313 (317)
136 cd05090 PTKc_Ror1 Catalytic do 100.0 3.8E-39 8.3E-44 316.2 24.0 252 7-274 5-282 (283)
137 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.3E-39 4.9E-44 327.6 23.1 259 6-278 6-342 (343)
138 PF00069 Pkinase: Protein kina 100.0 5.9E-39 1.3E-43 309.6 24.8 247 9-270 1-256 (260)
139 cd05082 PTKc_Csk Catalytic dom 100.0 2.8E-39 6.1E-44 312.4 22.6 246 7-274 6-255 (256)
140 cd08228 STKc_Nek6 Catalytic do 100.0 3E-39 6.5E-44 313.7 22.9 254 7-275 2-265 (267)
141 cd05630 STKc_GRK6 Catalytic do 100.0 4.8E-39 1E-43 316.7 24.6 241 8-264 1-249 (285)
142 cd06646 STKc_MAP4K5 Catalytic 100.0 2.1E-39 4.6E-44 314.9 21.9 253 3-270 5-264 (267)
143 cd05049 PTKc_Trk Catalytic dom 100.0 1.9E-39 4.1E-44 317.3 21.5 252 6-273 4-279 (280)
144 cd05088 PTKc_Tie2 Catalytic do 100.0 2.7E-39 5.9E-44 321.2 22.8 257 6-280 6-285 (303)
145 cd05632 STKc_GRK5 Catalytic do 100.0 5.6E-39 1.2E-43 316.0 24.9 242 8-265 1-250 (285)
146 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.4E-39 1.2E-43 310.4 24.2 248 7-272 4-255 (256)
147 cd05622 STKc_ROCK1 Catalytic d 100.0 2.8E-39 6E-44 330.6 23.4 251 6-276 42-306 (371)
148 cd05075 PTKc_Axl Catalytic dom 100.0 3.6E-39 7.8E-44 314.0 23.1 252 9-275 1-271 (272)
149 cd05035 PTKc_Axl_like Catalyti 100.0 2.8E-39 6E-44 314.4 22.2 252 9-275 1-272 (273)
150 cd05604 STKc_SGK3 Catalytic do 100.0 3.2E-39 6.9E-44 324.0 23.2 234 13-266 1-242 (325)
151 cd05033 PTKc_EphR Catalytic do 100.0 6.5E-39 1.4E-43 311.6 24.7 254 6-275 3-265 (266)
152 cd05115 PTKc_Zap-70 Catalytic 100.0 4.5E-39 9.8E-44 311.8 23.3 247 14-276 2-256 (257)
153 cd05094 PTKc_TrkC Catalytic do 100.0 6.8E-39 1.5E-43 316.1 24.8 257 6-278 4-285 (291)
154 cd05045 PTKc_RET Catalytic dom 100.0 5E-39 1.1E-43 316.7 23.8 255 8-278 1-289 (290)
155 PHA03209 serine/threonine kina 100.0 6.9E-39 1.5E-43 325.9 25.5 249 6-269 65-349 (357)
156 cd05043 PTK_Ryk Pseudokinase d 100.0 7.8E-39 1.7E-43 313.4 24.7 259 5-278 4-279 (280)
157 cd05111 PTK_HER3 Pseudokinase 100.0 5.3E-39 1.1E-43 315.1 23.5 255 6-277 6-270 (279)
158 cd05053 PTKc_FGFR Catalytic do 100.0 5.3E-39 1.2E-43 316.6 23.6 256 6-276 11-292 (293)
159 KOG4278 Protein tyrosine kinas 100.0 1.8E-39 4E-44 328.1 20.3 257 9-282 269-530 (1157)
160 cd05051 PTKc_DDR Catalytic dom 100.0 4.5E-39 9.7E-44 317.4 22.6 256 6-273 4-295 (296)
161 cd05055 PTKc_PDGFR Catalytic d 100.0 1.3E-38 2.9E-43 316.2 26.1 257 5-275 33-301 (302)
162 cd05068 PTKc_Frk_like Catalyti 100.0 1.1E-38 2.3E-43 309.1 24.8 252 6-275 5-261 (261)
163 cd05586 STKc_Sck1_like Catalyt 100.0 3.9E-39 8.5E-44 323.9 22.5 233 15-265 1-243 (330)
164 cd05067 PTKc_Lck_Blk Catalytic 100.0 7.4E-39 1.6E-43 310.1 23.6 252 4-274 3-259 (260)
165 cd06637 STKc_TNIK Catalytic do 100.0 7.2E-39 1.6E-43 311.9 23.6 249 5-269 4-267 (272)
166 cd06613 STKc_MAP4K3_like Catal 100.0 1.4E-38 3E-43 307.6 25.4 251 6-270 2-259 (262)
167 cd05116 PTKc_Syk Catalytic dom 100.0 5.2E-39 1.1E-43 310.9 22.4 246 13-275 1-255 (257)
168 cd05084 PTKc_Fes Catalytic dom 100.0 9.4E-39 2E-43 307.8 24.1 245 13-273 1-251 (252)
169 cd07861 STKc_CDK1_euk Catalyti 100.0 1.9E-38 4.2E-43 310.9 26.5 252 8-270 1-281 (285)
170 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.7E-38 3.7E-43 307.8 25.7 254 7-275 2-265 (267)
171 KOG0580 Serine/threonine prote 100.0 7.7E-40 1.7E-44 299.1 15.2 250 6-279 21-278 (281)
172 cd05097 PTKc_DDR_like Catalyti 100.0 5.7E-39 1.2E-43 317.3 22.7 259 6-273 4-294 (295)
173 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-38 2.4E-43 310.3 24.3 255 6-275 3-266 (267)
174 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-38 2.3E-43 313.0 24.2 259 6-276 2-282 (283)
175 cd05091 PTKc_Ror2 Catalytic do 100.0 3.2E-39 7E-44 316.6 20.4 252 7-274 5-282 (283)
176 cd05101 PTKc_FGFR2 Catalytic d 100.0 1E-38 2.2E-43 316.8 24.1 259 5-278 13-299 (304)
177 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.1E-38 4.6E-43 319.1 26.4 260 6-280 11-298 (334)
178 cd08219 STKc_Nek3 Catalytic do 100.0 1E-38 2.3E-43 308.0 23.1 245 8-270 1-251 (255)
179 cd05057 PTKc_EGFR_like Catalyt 100.0 2.1E-38 4.4E-43 310.4 25.4 260 1-277 1-270 (279)
180 cd05069 PTKc_Yes Catalytic dom 100.0 1.3E-38 2.9E-43 308.5 23.8 251 5-274 4-259 (260)
181 cd06625 STKc_MEKK3_like Cataly 100.0 1.5E-38 3.3E-43 307.8 24.1 249 7-270 2-259 (263)
182 cd08529 STKc_FA2-like Catalyti 100.0 2.7E-38 5.8E-43 304.6 25.7 245 8-270 1-252 (256)
183 cd08223 STKc_Nek4 Catalytic do 100.0 1.3E-38 2.8E-43 307.2 23.3 246 8-270 1-253 (257)
184 cd05113 PTKc_Btk_Bmx Catalytic 100.0 9.8E-39 2.1E-43 309.1 22.5 249 6-272 3-255 (256)
185 KOG0577 Serine/threonine prote 100.0 8.1E-41 1.8E-45 336.7 8.1 241 8-269 27-276 (948)
186 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.4E-38 5.3E-43 315.8 25.9 259 6-279 11-297 (314)
187 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-38 2.5E-43 328.7 24.2 256 7-276 37-400 (401)
188 cd05095 PTKc_DDR2 Catalytic do 100.0 1.3E-38 2.8E-43 314.9 23.6 259 6-273 4-295 (296)
189 cd05063 PTKc_EphR_A2 Catalytic 100.0 2E-38 4.4E-43 308.3 24.5 256 5-275 3-267 (268)
190 cd05061 PTKc_InsR Catalytic do 100.0 2.7E-38 5.8E-43 311.4 25.6 256 5-276 4-279 (288)
191 cd07839 STKc_CDK5 Catalytic do 100.0 1.3E-38 2.9E-43 312.1 23.2 250 8-270 1-280 (284)
192 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.1E-39 8.9E-44 311.6 19.2 251 5-274 4-260 (261)
193 cd07837 STKc_CdkB_plant Cataly 100.0 4.3E-38 9.3E-43 310.2 26.7 251 7-269 1-289 (295)
194 cd05065 PTKc_EphR_B Catalytic 100.0 2.3E-38 4.9E-43 308.3 24.5 257 6-275 3-268 (269)
195 cd08229 STKc_Nek7 Catalytic do 100.0 1E-38 2.2E-43 310.0 21.7 255 7-276 2-266 (267)
196 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-38 3.4E-43 307.9 22.9 251 5-274 4-259 (260)
197 cd05059 PTKc_Tec_like Catalyti 100.0 1.4E-38 3E-43 307.7 22.5 248 7-272 4-255 (256)
198 cd06619 PKc_MKK5 Catalytic dom 100.0 1.7E-38 3.8E-43 311.3 23.0 243 7-270 1-252 (279)
199 KOG2345 Serine/threonine prote 100.0 5.8E-40 1.3E-44 301.2 11.6 264 6-276 20-301 (302)
200 cd06638 STKc_myosinIIIA Cataly 100.0 3.6E-38 7.7E-43 309.4 25.2 252 4-270 15-282 (286)
201 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.2E-38 2.6E-43 312.3 21.8 248 6-269 15-277 (282)
202 cd05058 PTKc_Met_Ron Catalytic 100.0 2.5E-38 5.3E-43 306.4 23.7 252 13-277 1-261 (262)
203 cd07847 STKc_CDKL1_4 Catalytic 100.0 7.2E-38 1.6E-42 306.8 27.0 252 7-269 1-281 (286)
204 PRK13184 pknD serine/threonine 100.0 5.3E-38 1.1E-42 343.7 28.7 262 7-278 2-293 (932)
205 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-38 4.5E-43 309.4 23.0 253 5-273 4-276 (277)
206 cd06644 STKc_STK10_LOK Catalyt 100.0 3.3E-38 7.1E-43 311.2 24.3 249 5-269 10-267 (292)
207 cd07849 STKc_ERK1_2_like Catal 100.0 3E-38 6.6E-43 318.2 24.4 257 5-270 3-291 (336)
208 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.5E-38 3.3E-43 312.3 21.5 257 8-275 5-283 (284)
209 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.6E-38 5.5E-43 309.8 22.9 248 7-270 1-260 (283)
210 cd07867 STKc_CDC2L6 Catalytic 100.0 2.9E-38 6.3E-43 314.8 23.7 254 12-269 6-312 (317)
211 cd06645 STKc_MAP4K3 Catalytic 100.0 1.2E-38 2.5E-43 309.7 20.3 250 6-270 8-264 (267)
212 cd07831 STKc_MOK Catalytic dom 100.0 8.5E-38 1.8E-42 305.7 26.2 250 9-270 1-278 (282)
213 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.3E-38 7.3E-43 309.5 23.4 260 6-275 3-283 (284)
214 KOG0574 STE20-like serine/thre 100.0 3E-41 6.6E-46 316.5 1.7 257 8-283 34-292 (502)
215 cd07832 STKc_CCRK Catalytic do 100.0 7.8E-38 1.7E-42 306.6 25.8 253 8-270 1-281 (286)
216 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.5E-38 9.7E-43 305.4 23.8 250 8-270 1-263 (267)
217 cd00192 PTKc Catalytic domain 100.0 3.1E-38 6.6E-43 304.1 22.5 244 13-272 1-261 (262)
218 cd05060 PTKc_Syk_like Catalyti 100.0 4.3E-38 9.4E-43 304.2 23.6 246 13-275 1-255 (257)
219 cd05034 PTKc_Src_like Catalyti 100.0 5.1E-38 1.1E-42 304.0 24.1 253 4-274 3-260 (261)
220 cd05092 PTKc_TrkA Catalytic do 100.0 4.2E-38 9.2E-43 308.7 23.6 252 6-273 4-279 (280)
221 cd07845 STKc_CDK10 Catalytic d 100.0 8.6E-38 1.9E-42 310.9 26.0 255 5-269 5-288 (309)
222 PF07714 Pkinase_Tyr: Protein 100.0 2.4E-38 5.2E-43 307.4 21.4 247 10-272 2-259 (259)
223 cd05056 PTKc_FAK Catalytic dom 100.0 5.4E-38 1.2E-42 305.8 23.9 256 6-279 5-269 (270)
224 cd07844 STKc_PCTAIRE_like Cata 100.0 1.1E-37 2.3E-42 307.0 26.1 251 6-269 4-286 (291)
225 cd06654 STKc_PAK1 Catalytic do 100.0 7.4E-38 1.6E-42 309.9 25.1 248 5-270 18-269 (296)
226 KOG1187 Serine/threonine prote 100.0 2.5E-38 5.3E-43 320.2 21.9 257 7-276 75-353 (361)
227 KOG0194 Protein tyrosine kinas 100.0 4.4E-39 9.4E-44 329.0 16.5 255 7-279 157-424 (474)
228 cd05039 PTKc_Csk_like Catalyti 100.0 5.1E-38 1.1E-42 303.3 23.1 246 6-274 5-255 (256)
229 cd06643 STKc_SLK Catalytic dom 100.0 4.7E-38 1E-42 308.4 23.0 245 8-268 6-259 (282)
230 cd05110 PTKc_HER4 Catalytic do 100.0 7.3E-38 1.6E-42 310.8 24.3 258 4-278 4-271 (303)
231 cd05609 STKc_MAST Catalytic do 100.0 9.8E-38 2.1E-42 310.0 25.1 260 7-276 1-275 (305)
232 cd06612 STKc_MST1_2 Catalytic 100.0 5.3E-38 1.1E-42 302.5 22.5 249 6-270 2-252 (256)
233 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.5E-38 9.8E-43 308.9 22.3 247 7-270 1-261 (286)
234 cd06616 PKc_MKK4 Catalytic dom 100.0 2.7E-38 5.9E-43 310.8 20.8 251 7-270 4-266 (288)
235 cd06611 STKc_SLK_like Catalyti 100.0 3.1E-38 6.8E-43 309.1 21.0 248 6-269 4-260 (280)
236 cd07841 STKc_CDK7 Catalytic do 100.0 1.2E-37 2.6E-42 307.7 25.3 252 8-270 1-281 (298)
237 cd05073 PTKc_Hck Catalytic dom 100.0 9E-38 1.9E-42 302.7 23.9 252 4-274 3-259 (260)
238 cd05050 PTKc_Musk Catalytic do 100.0 5.2E-38 1.1E-42 309.0 22.4 252 6-273 4-287 (288)
239 cd05047 PTKc_Tie Catalytic dom 100.0 4.8E-38 1E-42 306.5 21.9 246 13-276 1-269 (270)
240 cd08221 STKc_Nek9 Catalytic do 100.0 2.1E-37 4.5E-42 298.9 26.1 245 8-270 1-252 (256)
241 cd07850 STKc_JNK Catalytic dom 100.0 7.2E-38 1.6E-42 317.7 24.0 249 4-269 13-309 (353)
242 cd06615 PKc_MEK Catalytic doma 100.0 1.6E-37 3.5E-42 309.1 26.1 255 7-278 1-291 (308)
243 cd06655 STKc_PAK2 Catalytic do 100.0 1.8E-37 3.9E-42 307.2 26.1 246 6-269 18-267 (296)
244 cd06609 STKc_MST3_like Catalyt 100.0 7.8E-38 1.7E-42 305.3 23.2 243 7-269 1-249 (274)
245 cd06608 STKc_myosinIII_like Ca 100.0 9.2E-38 2E-42 303.5 23.5 252 4-270 3-271 (275)
246 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.9E-37 6.3E-42 304.1 27.0 251 6-269 4-286 (291)
247 KOG1095 Protein tyrosine kinas 100.0 2.5E-38 5.3E-43 344.4 21.2 256 7-278 692-964 (1025)
248 KOG0983 Mitogen-activated prot 100.0 4.4E-39 9.5E-44 298.8 12.9 253 7-277 92-352 (391)
249 cd07866 STKc_BUR1 Catalytic do 100.0 1.3E-37 2.8E-42 308.7 24.5 262 5-269 6-306 (311)
250 cd05083 PTKc_Chk Catalytic dom 100.0 5.6E-38 1.2E-42 302.9 21.2 244 6-273 5-252 (254)
251 cd06630 STKc_MEKK1 Catalytic d 100.0 1.2E-37 2.5E-42 302.5 23.4 252 8-269 1-262 (268)
252 cd05574 STKc_phototropin_like 100.0 2.5E-37 5.4E-42 308.4 26.0 248 7-264 1-278 (316)
253 KOG0599 Phosphorylase kinase g 100.0 3E-39 6.6E-44 299.7 11.1 248 6-269 16-281 (411)
254 cd08227 PK_STRAD_alpha Pseudok 100.0 9.2E-38 2E-42 313.5 22.7 253 11-270 2-306 (327)
255 cd08220 STKc_Nek8 Catalytic do 100.0 1.6E-37 3.4E-42 299.2 23.5 245 8-270 1-252 (256)
256 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.9E-38 1.7E-42 306.0 21.6 259 6-275 3-283 (284)
257 PLN00009 cyclin-dependent kina 100.0 4.9E-37 1.1E-41 302.9 27.2 254 7-270 2-283 (294)
258 cd06639 STKc_myosinIIIB Cataly 100.0 3.6E-37 7.8E-42 303.4 26.1 251 5-270 20-286 (291)
259 cd05040 PTKc_Ack_like Catalyti 100.0 1.3E-37 2.9E-42 300.4 22.5 246 13-273 1-256 (257)
260 cd05580 STKc_PKA Catalytic dom 100.0 3.4E-37 7.4E-42 303.8 25.8 254 7-293 1-266 (290)
261 cd07865 STKc_CDK9 Catalytic do 100.0 3E-37 6.5E-42 305.9 25.4 259 5-269 10-305 (310)
262 cd07833 STKc_CDKL Catalytic do 100.0 4.1E-37 8.8E-42 301.8 26.0 254 7-270 1-284 (288)
263 cd06651 STKc_MEKK3 Catalytic d 100.0 1.4E-37 3.1E-42 302.4 22.5 248 7-269 2-259 (266)
264 KOG4257 Focal adhesion tyrosin 100.0 5.8E-38 1.2E-42 317.8 20.2 254 10-281 392-655 (974)
265 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 7.1E-38 1.5E-42 307.6 20.4 252 6-271 4-266 (284)
266 cd06640 STKc_MST4 Catalytic do 100.0 1.2E-37 2.7E-42 304.7 22.0 245 6-270 3-252 (277)
267 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.9E-37 4.2E-42 312.6 24.0 255 5-270 3-290 (337)
268 cd05041 PTKc_Fes_like Catalyti 100.0 2.8E-37 6.1E-42 297.1 24.0 244 13-273 1-250 (251)
269 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.2E-37 6.8E-42 298.7 24.5 253 7-270 1-263 (267)
270 cd07836 STKc_Pho85 Catalytic d 100.0 5.6E-37 1.2E-41 300.4 26.5 251 8-269 1-279 (284)
271 cd08217 STKc_Nek2 Catalytic do 100.0 1.5E-37 3.2E-42 300.2 22.1 246 8-270 1-261 (265)
272 cd05085 PTKc_Fer Catalytic dom 100.0 3.8E-37 8.1E-42 296.0 24.7 243 13-273 1-249 (250)
273 cd07860 STKc_CDK2_3 Catalytic 100.0 3.7E-37 8E-42 301.9 25.0 251 8-269 1-279 (284)
274 cd06656 STKc_PAK3 Catalytic do 100.0 2E-37 4.3E-42 307.0 23.3 247 6-270 18-268 (297)
275 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.4E-37 5.2E-42 303.3 23.6 252 7-270 1-282 (286)
276 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.3E-37 4.9E-42 312.8 24.1 257 5-269 3-298 (342)
277 cd07855 STKc_ERK5 Catalytic do 100.0 1.9E-37 4.2E-42 312.1 23.2 258 5-269 3-292 (334)
278 PHA03210 serine/threonine kina 100.0 1.5E-37 3.2E-42 329.6 23.5 255 5-269 146-452 (501)
279 cd06652 STKc_MEKK2 Catalytic d 100.0 3.3E-37 7.2E-42 299.4 23.8 249 7-270 2-260 (265)
280 cd05112 PTKc_Itk Catalytic dom 100.0 5.3E-37 1.2E-41 296.0 24.9 248 7-272 4-255 (256)
281 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.5E-37 7.6E-42 300.1 23.6 249 13-273 1-268 (269)
282 cd07842 STKc_CDK8_like Catalyt 100.0 8.3E-37 1.8E-41 303.8 26.8 258 8-270 1-312 (316)
283 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.4E-37 5.3E-42 298.4 22.1 238 13-272 1-258 (259)
284 smart00219 TyrKc Tyrosine kina 100.0 5.2E-37 1.1E-41 295.4 24.2 247 9-272 1-258 (258)
285 cd07852 STKc_MAPK15 Catalytic 100.0 2.2E-37 4.8E-42 312.0 22.6 263 1-270 1-294 (337)
286 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1E-36 2.2E-41 299.9 26.8 252 7-270 1-265 (287)
287 cd07843 STKc_CDC2L1 Catalytic 100.0 3.5E-37 7.6E-42 303.8 23.5 255 5-270 3-289 (293)
288 cd06605 PKc_MAPKK Catalytic do 100.0 1.4E-37 3.1E-42 301.3 20.3 246 7-269 1-255 (265)
289 cd05633 STKc_GRK3 Catalytic do 100.0 5.4E-37 1.2E-41 301.1 24.7 233 14-264 1-243 (279)
290 KOG0690 Serine/threonine prote 100.0 8.9E-39 1.9E-43 302.8 11.4 264 5-295 166-438 (516)
291 cd05042 PTKc_Aatyk Catalytic d 100.0 4.9E-37 1.1E-41 298.9 23.9 248 13-273 1-268 (269)
292 cd06631 STKc_YSK4 Catalytic do 100.0 4.8E-37 1E-41 298.1 23.5 251 8-270 1-261 (265)
293 cd06917 STKc_NAK1_like Catalyt 100.0 4.7E-37 1E-41 300.1 23.3 245 7-270 1-254 (277)
294 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-36 2.6E-41 294.1 25.9 248 7-270 1-255 (264)
295 cd06618 PKc_MKK7 Catalytic dom 100.0 2.2E-37 4.8E-42 306.1 21.1 251 5-270 13-272 (296)
296 cd08218 STKc_Nek1 Catalytic do 100.0 3.7E-37 7.9E-42 297.1 22.1 245 8-270 1-252 (256)
297 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1E-36 2.2E-41 306.4 26.2 250 4-268 7-285 (328)
298 PHA03390 pk1 serine/threonine- 100.0 5.2E-37 1.1E-41 299.3 23.1 242 6-269 13-260 (267)
299 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 8E-38 1.7E-42 302.9 17.3 239 13-272 1-257 (258)
300 cd06607 STKc_TAO Catalytic dom 100.0 5.7E-37 1.2E-41 304.8 23.8 245 5-270 13-266 (307)
301 KOG0986 G protein-coupled rece 100.0 1.9E-38 4.1E-43 311.9 12.8 268 2-295 180-460 (591)
302 cd05611 STKc_Rim15_like Cataly 100.0 4.5E-37 9.8E-42 297.4 22.3 247 13-278 2-255 (260)
303 cd05044 PTKc_c-ros Catalytic d 100.0 2.5E-37 5.4E-42 300.5 20.5 248 13-273 1-268 (269)
304 cd06629 STKc_MAPKKK_Bck1_like 100.0 1E-36 2.2E-41 296.9 24.6 250 8-270 2-268 (272)
305 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.8E-37 1E-41 298.6 22.2 239 13-272 1-261 (262)
306 cd05046 PTK_CCK4 Pseudokinase 100.0 9.6E-37 2.1E-41 297.6 24.3 251 7-273 5-274 (275)
307 PTZ00024 cyclin-dependent prot 100.0 7.6E-37 1.6E-41 307.6 24.0 261 1-269 2-311 (335)
308 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-37 2.4E-42 305.0 17.4 245 6-270 3-252 (277)
309 cd07835 STKc_CDK1_like Catalyt 100.0 1.1E-36 2.3E-41 298.5 24.4 251 9-270 1-279 (283)
310 cd07857 STKc_MPK1 Catalytic do 100.0 1.7E-36 3.7E-41 304.9 26.4 254 8-268 1-289 (332)
311 cd06624 STKc_ASK Catalytic dom 100.0 1.2E-36 2.7E-41 295.9 24.5 247 9-270 10-264 (268)
312 cd07838 STKc_CDK4_6_like Catal 100.0 1.9E-36 4E-41 296.7 25.8 247 9-269 1-282 (287)
313 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.3E-37 1.4E-41 299.9 22.3 238 14-272 2-273 (274)
314 cd06658 STKc_PAK5 Catalytic do 100.0 2.5E-37 5.3E-42 305.6 19.3 246 7-270 22-271 (292)
315 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.8E-36 3.9E-41 306.4 26.0 250 5-269 13-296 (343)
316 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.5E-36 3.2E-41 307.3 25.3 251 4-269 14-298 (345)
317 cd07864 STKc_CDK12 Catalytic d 100.0 7.4E-37 1.6E-41 302.4 22.7 258 4-270 4-298 (302)
318 cd06641 STKc_MST3 Catalytic do 100.0 1.1E-36 2.4E-41 298.0 23.6 244 7-270 4-252 (277)
319 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.1E-36 2.4E-41 295.7 23.2 248 7-269 2-259 (264)
320 cd07840 STKc_CDK9_like Catalyt 100.0 1.7E-36 3.7E-41 296.7 24.7 253 9-270 1-283 (287)
321 cd08225 STKc_Nek5 Catalytic do 100.0 8.2E-37 1.8E-41 294.4 22.0 246 8-270 1-253 (257)
322 cd05118 STKc_CMGC Catalytic do 100.0 7.1E-37 1.5E-41 299.1 21.8 251 9-270 1-279 (283)
323 cd05578 STKc_Yank1 Catalytic d 100.0 4.2E-37 9.1E-42 297.3 19.8 241 8-266 1-248 (258)
324 KOG0584 Serine/threonine prote 100.0 5.9E-38 1.3E-42 320.2 14.2 249 9-279 42-301 (632)
325 cd06659 STKc_PAK6 Catalytic do 100.0 5.5E-37 1.2E-41 303.9 20.5 246 7-270 21-270 (297)
326 cd06632 STKc_MEKK1_plant Catal 100.0 1.5E-36 3.1E-41 292.6 22.7 244 8-270 1-254 (258)
327 cd07879 STKc_p38delta_MAPK13 C 100.0 2.4E-36 5.3E-41 305.3 25.3 247 4-269 12-295 (342)
328 cd05583 STKc_MSK_N N-terminal 100.0 1.5E-36 3.2E-41 298.6 23.0 263 8-292 1-277 (288)
329 KOG0612 Rho-associated, coiled 100.0 2.2E-38 4.8E-43 339.3 10.7 262 6-293 74-350 (1317)
330 cd05606 STKc_beta_ARK Catalyti 100.0 4.8E-36 1E-40 294.1 26.3 238 14-269 1-253 (278)
331 cd07834 STKc_MAPK Catalytic do 100.0 1.6E-36 3.5E-41 304.3 23.3 251 8-269 1-287 (330)
332 KOG0671 LAMMER dual specificit 100.0 3.9E-38 8.4E-43 304.9 11.0 260 4-276 86-408 (415)
333 cd06635 STKc_TAO1 Catalytic do 100.0 3.3E-36 7.1E-41 300.9 25.3 244 6-270 24-276 (317)
334 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.6E-36 3.4E-41 295.6 21.9 252 9-275 1-272 (273)
335 KOG0579 Ste20-like serine/thre 100.0 1.9E-38 4E-43 321.4 8.6 247 7-269 32-287 (1187)
336 cd07851 STKc_p38 Catalytic dom 100.0 1.7E-36 3.6E-41 306.6 22.6 247 5-269 13-296 (343)
337 cd05122 PKc_STE Catalytic doma 100.0 5.1E-36 1.1E-40 286.5 24.5 246 8-270 1-250 (253)
338 cd06626 STKc_MEKK4 Catalytic d 100.0 6.8E-36 1.5E-40 289.2 25.6 250 8-269 1-259 (264)
339 cd06633 STKc_TAO3 Catalytic do 100.0 7.3E-36 1.6E-40 298.0 26.3 243 6-269 20-271 (313)
340 cd08528 STKc_Nek10 Catalytic d 100.0 2.5E-36 5.5E-41 293.6 22.4 249 8-273 1-268 (269)
341 cd05577 STKc_GRK Catalytic dom 100.0 5E-36 1.1E-40 293.3 24.6 236 15-266 1-244 (277)
342 cd06647 STKc_PAK_I Catalytic d 100.0 2E-36 4.3E-41 299.2 21.9 246 6-269 18-267 (293)
343 cd08215 STKc_Nek Catalytic dom 100.0 3.8E-36 8.3E-41 288.8 23.1 245 8-270 1-254 (258)
344 cd05581 STKc_PDK1 Catalytic do 100.0 2.6E-36 5.7E-41 294.3 22.1 247 7-265 1-267 (280)
345 cd06614 STKc_PAK Catalytic dom 100.0 3.2E-36 7E-41 295.9 22.9 249 5-269 17-268 (286)
346 cd07830 STKc_MAK_like Catalyti 100.0 4E-36 8.6E-41 294.2 23.4 251 9-270 1-279 (283)
347 cd06606 STKc_MAPKKK Catalytic 100.0 8.4E-36 1.8E-40 286.1 25.2 248 8-270 1-256 (260)
348 cd05613 STKc_MSK1_N N-terminal 100.0 7.9E-36 1.7E-40 293.7 25.3 243 8-264 1-256 (290)
349 KOG4250 TANK binding protein k 100.0 4E-37 8.6E-42 317.7 16.0 267 5-280 11-315 (732)
350 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-38 2.9E-43 344.8 5.0 258 6-280 1234-1500(1509)
351 cd06648 STKc_PAK_II Catalytic 100.0 7.1E-36 1.5E-40 293.9 23.9 244 8-269 20-267 (285)
352 cd06634 STKc_TAO2 Catalytic do 100.0 5.1E-36 1.1E-40 298.4 23.0 244 6-270 14-266 (308)
353 KOG0586 Serine/threonine prote 100.0 8.8E-37 1.9E-41 311.3 17.7 245 4-269 53-304 (596)
354 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-35 2.7E-40 285.1 24.6 243 8-269 1-249 (254)
355 KOG0604 MAP kinase-activated p 100.0 2.2E-37 4.8E-42 290.7 12.0 260 4-277 58-325 (400)
356 cd08530 STKc_CNK2-like Catalyt 100.0 4.3E-36 9.3E-41 288.9 21.2 243 8-270 1-252 (256)
357 KOG0607 MAP kinase-interacting 100.0 7.1E-37 1.5E-41 289.4 15.1 259 8-268 78-358 (463)
358 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.4E-35 3E-40 289.0 24.3 248 13-273 1-267 (268)
359 cd05572 STKc_cGK_PKG Catalytic 100.0 9.2E-36 2E-40 288.6 22.7 233 15-264 1-240 (262)
360 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-35 2.3E-40 290.6 23.0 251 9-270 1-278 (282)
361 KOG0696 Serine/threonine prote 100.0 3.4E-37 7.5E-42 299.6 12.1 270 6-301 348-626 (683)
362 KOG1151 Tousled-like protein k 100.0 8.2E-38 1.8E-42 306.1 7.8 262 3-268 459-738 (775)
363 KOG4236 Serine/threonine prote 100.0 2.5E-37 5.5E-42 308.0 10.8 241 12-267 569-815 (888)
364 cd08226 PK_STRAD_beta Pseudoki 100.0 1.6E-35 3.4E-40 297.4 23.1 251 13-269 4-306 (328)
365 cd05579 STKc_MAST_like Catalyt 100.0 9.1E-36 2E-40 287.6 20.0 251 15-276 1-259 (265)
366 KOG1094 Discoidin domain recep 100.0 1.8E-36 3.9E-41 305.4 15.0 259 7-275 538-804 (807)
367 cd06657 STKc_PAK4 Catalytic do 100.0 2.1E-35 4.6E-40 291.9 21.9 242 11-270 24-269 (292)
368 cd05610 STKc_MASTL Catalytic d 100.0 6.8E-35 1.5E-39 318.8 27.9 144 6-154 3-153 (669)
369 KOG0199 ACK and related non-re 100.0 1.3E-36 2.8E-41 311.5 12.5 248 7-270 110-367 (1039)
370 cd08222 STKc_Nek11 Catalytic d 100.0 1.3E-35 2.8E-40 287.3 18.8 244 8-270 1-256 (260)
371 KOG0666 Cyclin C-dependent kin 100.0 4.5E-36 9.7E-41 283.2 13.6 267 6-279 23-342 (438)
372 KOG0587 Traf2- and Nck-interac 100.0 2.5E-35 5.4E-40 309.7 19.8 249 5-268 17-279 (953)
373 cd08216 PK_STRAD Pseudokinase 100.0 5.9E-35 1.3E-39 290.8 21.2 251 11-269 6-293 (314)
374 KOG1006 Mitogen-activated prot 100.0 2E-37 4.3E-42 286.8 2.1 250 8-270 65-326 (361)
375 KOG0662 Cyclin-dependent kinas 100.0 2.9E-35 6.3E-40 258.3 14.2 251 7-268 2-280 (292)
376 KOG0603 Ribosomal protein S6 k 100.0 2.8E-35 6E-40 301.8 16.3 241 5-269 320-561 (612)
377 cd05123 STKc_AGC Catalytic dom 100.0 1.3E-34 2.9E-39 277.8 20.1 233 15-267 1-240 (250)
378 KOG0196 Tyrosine kinase, EPH ( 100.0 7.2E-36 1.6E-40 309.6 11.9 256 7-277 629-893 (996)
379 KOG0695 Serine/threonine prote 100.0 8.8E-36 1.9E-40 283.3 11.1 273 6-298 249-533 (593)
380 KOG0614 cGMP-dependent protein 100.0 2.5E-36 5.3E-41 300.2 7.5 266 7-298 420-694 (732)
381 KOG0669 Cyclin T-dependent kin 100.0 1.1E-36 2.3E-41 280.0 4.0 258 6-269 16-313 (376)
382 PLN03225 Serine/threonine-prot 100.0 1.9E-34 4.1E-39 308.5 20.9 251 6-269 131-448 (566)
383 KOG1035 eIF-2alpha kinase GCN2 100.0 4E-35 8.6E-40 316.7 15.0 256 5-269 477-869 (1351)
384 KOG2052 Activin A type IB rece 100.0 4.4E-34 9.5E-39 281.1 18.8 265 3-277 207-505 (513)
385 KOG1290 Serine/threonine prote 100.0 1.8E-33 3.9E-38 279.2 22.4 131 5-135 76-221 (590)
386 KOG0200 Fibroblast/platelet-de 100.0 1.6E-33 3.4E-38 304.1 22.6 256 8-278 297-582 (609)
387 cd05576 STKc_RPK118_like Catal 100.0 8.1E-34 1.8E-38 271.8 18.1 219 18-265 4-223 (237)
388 KOG0670 U4/U6-associated splic 100.0 7.6E-35 1.6E-39 290.3 10.0 204 4-218 429-641 (752)
389 KOG3653 Transforming growth fa 100.0 1.6E-33 3.4E-38 279.0 16.2 256 7-276 210-504 (534)
390 PLN00113 leucine-rich repeat r 100.0 1.2E-32 2.7E-37 314.2 23.6 249 8-277 691-953 (968)
391 KOG0608 Warts/lats-like serine 100.0 3.1E-33 6.7E-38 283.9 15.9 275 7-298 629-945 (1034)
392 KOG1025 Epidermal growth facto 100.0 4.8E-33 1E-37 289.6 14.7 253 9-278 698-960 (1177)
393 KOG1027 Serine/threonine prote 100.0 2E-33 4.3E-38 294.2 9.5 245 12-269 514-765 (903)
394 smart00220 S_TKc Serine/Threon 100.0 2.4E-31 5.3E-36 252.1 21.8 235 19-270 1-240 (244)
395 KOG1345 Serine/threonine kinas 100.0 1.3E-32 2.7E-37 255.6 11.1 265 5-283 22-296 (378)
396 KOG0668 Casein kinase II, alph 100.0 1.2E-32 2.6E-37 250.2 10.2 250 6-269 37-320 (338)
397 KOG0984 Mitogen-activated prot 100.0 1.4E-32 3.1E-37 246.3 10.2 211 8-231 47-269 (282)
398 PLN03224 probable serine/threo 100.0 1.4E-30 3E-35 273.1 24.0 252 6-269 144-498 (507)
399 KOG0664 Nemo-like MAPK-related 100.0 2E-33 4.4E-38 260.9 1.8 254 5-268 51-340 (449)
400 KOG1024 Receptor-like protein 100.0 1E-30 2.2E-35 253.4 15.8 259 6-279 283-559 (563)
401 KOG1152 Signal transduction se 100.0 3.7E-31 8.1E-36 266.9 11.3 194 8-214 562-771 (772)
402 cd00180 PKc Catalytic domain o 100.0 4E-29 8.6E-34 230.7 22.2 207 15-271 1-214 (215)
403 KOG1167 Serine/threonine prote 100.0 1.4E-30 3.1E-35 255.5 10.2 206 3-214 32-280 (418)
404 KOG0665 Jun-N-terminal kinase 100.0 3E-30 6.4E-35 245.0 10.3 255 5-277 15-313 (369)
405 KOG0576 Mitogen-activated prot 100.0 3.5E-30 7.6E-35 263.8 4.7 263 6-283 14-294 (829)
406 smart00750 KIND kinase non-cat 100.0 5.6E-28 1.2E-32 220.3 16.5 167 86-277 1-171 (176)
407 smart00221 STYKc Protein kinas 100.0 2.1E-27 4.6E-32 223.2 20.2 196 9-214 1-202 (225)
408 PLN00181 protein SPA1-RELATED; 100.0 1.4E-28 3.1E-33 274.7 11.4 188 74-270 52-264 (793)
409 PRK09188 serine/threonine prot 99.9 1.6E-25 3.5E-30 225.7 14.7 179 3-196 14-210 (365)
410 COG0515 SPS1 Serine/threonine 99.9 7.9E-24 1.7E-28 206.9 25.5 256 9-271 2-275 (384)
411 KOG0590 Checkpoint kinase and 99.9 1.2E-24 2.7E-29 232.8 7.4 259 10-279 321-590 (601)
412 PF14531 Kinase-like: Kinase-l 99.9 5.4E-23 1.2E-27 199.5 12.3 230 8-262 13-288 (288)
413 KOG1166 Mitotic checkpoint ser 99.9 1.9E-22 4.1E-27 220.6 17.3 255 5-279 696-957 (974)
414 cd05147 RIO1_euk RIO kinase fa 99.9 2.4E-22 5.2E-27 186.2 12.7 135 12-155 2-167 (190)
415 PRK10359 lipopolysaccharide co 99.9 3.9E-22 8.4E-27 188.1 11.6 170 2-206 26-216 (232)
416 KOG0606 Microtubule-associated 99.9 1.2E-22 2.5E-27 218.4 8.7 216 6-264 82-305 (1205)
417 PRK12274 serine/threonine prot 99.9 3.9E-21 8.5E-26 177.9 14.2 192 9-217 4-212 (218)
418 cd05145 RIO1_like RIO kinase f 99.9 4.5E-21 9.8E-26 177.8 14.7 137 11-157 1-169 (190)
419 KOG1240 Protein kinase contain 99.8 4.9E-22 1.1E-26 213.8 5.8 248 8-272 24-292 (1431)
420 KOG0603 Ribosomal protein S6 k 99.8 5.6E-22 1.2E-26 204.2 4.1 249 14-298 1-260 (612)
421 KOG4158 BRPK/PTEN-induced prot 99.8 8.9E-21 1.9E-25 185.1 11.6 196 74-279 315-518 (598)
422 PRK10345 hypothetical protein; 99.8 6E-19 1.3E-23 165.5 15.6 134 12-152 7-156 (210)
423 smart00090 RIO RIO-like kinase 99.8 2.6E-19 5.7E-24 171.5 12.4 140 8-155 29-198 (237)
424 KOG0195 Integrin-linked kinase 99.8 1.6E-19 3.4E-24 168.5 6.9 241 9-275 192-446 (448)
425 KOG1033 eIF-2alpha kinase PEK/ 99.8 5.9E-20 1.3E-24 186.0 3.3 242 7-265 244-506 (516)
426 PRK14879 serine/threonine prot 99.8 3.6E-18 7.7E-23 160.4 14.8 130 13-154 2-143 (211)
427 KOG1023 Natriuretic peptide re 99.8 2E-18 4.4E-23 177.7 12.4 212 57-278 3-227 (484)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 1.1E-17 2.4E-22 155.7 14.2 126 14-154 1-138 (199)
429 cd05144 RIO2_C RIO kinase fami 99.7 2.5E-17 5.5E-22 153.5 13.0 135 8-157 16-177 (198)
430 PRK09605 bifunctional UGMP fam 99.7 1.1E-16 2.3E-21 171.5 15.7 132 7-154 333-476 (535)
431 cd05119 RIO RIO kinase family, 99.7 3.3E-16 7.1E-21 144.2 12.6 134 12-157 2-166 (187)
432 PRK01723 3-deoxy-D-manno-octul 99.6 7.1E-15 1.5E-19 141.1 15.9 131 13-154 37-191 (239)
433 cd05120 APH_ChoK_like Aminogly 99.6 4.3E-15 9.2E-20 130.3 12.6 131 11-154 2-138 (155)
434 KOG0590 Checkpoint kinase and 99.6 5.1E-17 1.1E-21 174.3 -3.2 252 6-268 19-283 (601)
435 KOG0601 Cyclin-dependent kinas 99.5 4.6E-15 9.9E-20 153.2 6.5 252 6-270 113-378 (524)
436 TIGR01982 UbiB 2-polyprenylphe 99.5 5.8E-14 1.3E-18 146.2 12.3 138 13-157 123-309 (437)
437 cd05151 ChoK Choline Kinase (C 99.4 7.4E-13 1.6E-17 119.6 11.8 125 12-153 3-135 (170)
438 PRK04750 ubiB putative ubiquin 99.4 8.3E-12 1.8E-16 132.0 21.0 142 8-157 121-316 (537)
439 cd05146 RIO3_euk RIO kinase fa 99.4 1.2E-12 2.7E-17 120.9 12.3 135 12-156 2-175 (197)
440 KOG3087 Serine/threonine prote 99.4 2.4E-11 5.2E-16 108.8 14.9 141 11-154 11-165 (229)
441 COG3642 Mn2+-dependent serine/ 99.3 2.1E-11 4.6E-16 109.5 13.0 126 13-153 2-139 (204)
442 KOG0606 Microtubule-associated 99.2 2.3E-12 4.9E-17 140.0 2.0 270 5-294 802-1105(1205)
443 KOG0601 Cyclin-dependent kinas 99.2 5.9E-12 1.3E-16 130.4 4.4 239 6-269 264-512 (524)
444 KOG1243 Protein kinase [Genera 99.1 5.8E-10 1.3E-14 116.9 13.4 181 9-209 15-200 (690)
445 KOG1266 Protein kinase [Signal 99.1 5.2E-11 1.1E-15 114.8 4.7 176 76-268 146-328 (458)
446 cd05154 ACAD10_11_like Acyl-Co 99.1 6.6E-10 1.4E-14 104.5 11.7 137 13-153 4-205 (223)
447 COG4248 Uncharacterized protei 99.1 2E-09 4.3E-14 107.3 15.1 255 9-277 13-302 (637)
448 PRK15123 lipopolysaccharide co 99.1 7.7E-09 1.7E-13 100.7 17.9 133 19-153 34-193 (268)
449 PF01163 RIO1: RIO1 family; I 99.0 3.1E-09 6.8E-14 97.8 9.6 124 22-156 1-157 (188)
450 KOG2137 Protein kinase [Signal 98.8 1.6E-09 3.5E-14 114.1 4.0 154 108-268 105-262 (700)
451 PF06293 Kdo: Lipopolysacchari 98.8 1.3E-07 2.7E-12 88.8 13.3 109 45-155 55-171 (206)
452 PRK09902 hypothetical protein; 98.7 5.7E-07 1.2E-11 83.7 15.8 136 16-154 27-179 (216)
453 KOG3741 Poly(A) ribonuclease s 98.7 1.2E-06 2.6E-11 89.9 18.5 208 20-269 289-519 (655)
454 PF06176 WaaY: Lipopolysacchar 98.6 3.5E-07 7.7E-12 85.5 11.8 136 3-153 27-182 (229)
455 COG0478 RIO-like serine/threon 98.6 2.4E-07 5.2E-12 88.4 10.3 132 9-154 93-251 (304)
456 COG0661 AarF Predicted unusual 98.5 5.3E-07 1.1E-11 95.1 11.6 139 13-157 131-317 (517)
457 COG2112 Predicted Ser/Thr prot 98.5 7.2E-07 1.6E-11 80.0 10.0 126 11-154 26-155 (201)
458 COG1718 RIO1 Serine/threonine 98.5 1.2E-06 2.7E-11 82.8 12.0 135 12-156 53-217 (268)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 3E-06 6.4E-11 80.7 14.1 70 13-86 7-78 (226)
460 cd05150 APH Aminoglycoside 3'- 98.4 6.4E-06 1.4E-10 79.1 13.5 74 15-90 6-81 (244)
461 PF01636 APH: Phosphotransfera 98.3 7E-06 1.5E-10 77.4 13.0 138 12-153 2-196 (239)
462 PF10707 YrbL-PhoP_reg: PhoP r 98.2 3.7E-05 8.1E-10 71.5 15.0 132 12-152 6-170 (199)
463 KOG1235 Predicted unusual prot 98.1 1.6E-05 3.6E-10 83.8 11.8 142 13-157 167-357 (538)
464 KOG0576 Mitogen-activated prot 98.1 5E-07 1.1E-11 94.7 -0.7 186 9-213 244-431 (829)
465 PF13095 FTA2: Kinetochore Sim 98.0 9.7E-05 2.1E-09 68.4 12.5 123 7-152 37-206 (207)
466 PRK09550 mtnK methylthioribose 97.9 0.0025 5.4E-08 65.6 22.5 72 12-85 31-114 (401)
467 cd05155 APH_ChoK_like_1 Unchar 97.9 7.6E-05 1.6E-09 71.3 10.2 67 13-84 3-76 (235)
468 PLN02876 acyl-CoA dehydrogenas 97.9 0.00016 3.5E-09 81.7 14.2 76 11-86 42-128 (822)
469 KOG2270 Serine/threonine prote 97.8 0.00019 4E-09 71.7 11.1 137 11-155 148-314 (520)
470 TIGR01767 MTRK 5-methylthiorib 97.7 0.0037 7.9E-08 63.2 19.3 69 14-84 2-82 (370)
471 cd05157 ETNK_euk Ethanolamine 97.6 0.00093 2E-08 63.6 12.8 69 12-84 3-74 (235)
472 PRK10593 hypothetical protein; 97.6 0.0013 2.8E-08 65.3 13.8 76 8-85 15-96 (297)
473 PRK05231 homoserine kinase; Pr 97.5 0.0021 4.5E-08 64.3 14.0 73 12-86 27-106 (319)
474 TIGR02721 ycfN_thiK thiamine k 97.4 0.00087 1.9E-08 64.8 10.2 130 14-153 3-174 (256)
475 KOG2268 Serine/threonine prote 97.4 0.00012 2.6E-09 71.9 3.8 131 9-154 94-251 (465)
476 PF12260 PIP49_C: Protein-kina 97.4 0.00055 1.2E-08 63.2 8.0 95 49-155 7-112 (188)
477 PRK12396 5-methylribose kinase 97.4 0.013 2.9E-07 60.0 18.2 71 12-84 34-115 (409)
478 KOG1093 Predicted protein kina 97.3 0.00055 1.2E-08 71.0 7.8 162 45-268 26-191 (725)
479 cd05156 ChoK_euk Choline Kinas 97.3 0.0021 4.5E-08 63.7 11.5 69 12-84 3-79 (302)
480 cd05153 HomoserineK_II Homoser 97.3 0.0029 6.3E-08 62.4 12.3 137 12-153 19-204 (296)
481 TIGR00938 thrB_alt homoserine 97.2 0.0039 8.5E-08 62.1 12.2 138 11-153 26-216 (307)
482 KOG1035 eIF-2alpha kinase GCN2 97.2 0.0017 3.8E-08 73.0 10.2 202 48-279 229-439 (1351)
483 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.0027 5.8E-08 62.3 9.8 30 122-153 186-215 (276)
484 KOG1826 Ras GTPase activating 97.1 0.00012 2.5E-09 83.9 -0.5 152 51-212 1279-1440(2724)
485 PLN02236 choline kinase 97.0 0.016 3.4E-07 58.8 14.8 137 11-153 40-230 (344)
486 PLN02421 phosphotransferase, a 96.8 0.018 3.9E-07 58.1 12.5 69 12-84 19-92 (330)
487 PLN02756 S-methyl-5-thioribose 96.5 0.057 1.2E-06 55.7 13.9 72 11-86 36-119 (418)
488 PF03881 Fructosamin_kin: Fruc 96.4 0.054 1.2E-06 53.5 12.9 73 10-84 20-94 (288)
489 COG5072 ALK1 Serine/threonine 96.2 0.02 4.3E-07 57.5 8.1 74 72-154 296-370 (488)
490 PRK11768 serine/threonine prot 96.0 0.19 4.2E-06 50.5 14.6 67 18-85 36-110 (325)
491 KOG1236 Predicted unusual prot 96.0 0.017 3.8E-07 58.7 6.7 59 77-137 320-380 (565)
492 PTZ00384 choline kinase; Provi 95.7 0.25 5.5E-06 50.8 14.2 70 11-84 54-131 (383)
493 PF01633 Choline_kinase: Choli 95.5 0.031 6.7E-07 52.3 6.2 30 122-153 144-173 (211)
494 COG3173 Predicted aminoglycosi 95.1 0.34 7.4E-06 48.4 12.5 31 122-155 199-229 (321)
495 COG2334 Putative homoserine ki 95.0 0.24 5.1E-06 49.9 11.2 134 14-153 33-227 (331)
496 TIGR02904 spore_ysxE spore coa 95.0 0.32 7E-06 48.4 12.2 29 122-153 197-225 (309)
497 PTZ00296 choline kinase; Provi 94.6 0.49 1.1E-05 49.7 12.7 70 11-84 109-188 (442)
498 COG0510 ycfN Thiamine kinase a 94.4 0.42 9.2E-06 46.7 11.1 44 107-153 137-182 (269)
499 TIGR02906 spore_CotS spore coa 93.9 0.11 2.4E-06 51.4 6.0 29 121-153 187-215 (313)
500 PRK06148 hypothetical protein; 93.6 1.4 3.1E-05 51.2 15.0 46 13-60 31-77 (1013)
No 1
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-59 Score=425.13 Aligned_cols=293 Identities=71% Similarity=1.246 Sum_probs=285.3
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEE-cccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-NVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~-~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
-+++++|+++++||+|+||.+|+|....+|+.||||+ -.+..++++..|.++++.|++..+|+.+.+|+.+.++.++||
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 4678999999999999999999999999999999999 456678999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|++|++|+++++.|.+.|+.++++.++.||+..|+|+|.+++|||||||+|+|++.+.....+.|+|||+|+.+.+..+.
T Consensus 91 dLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 91 DLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred eccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
.|+||++...++||.+|++...+.|.++++++|+.|+|++|+++..|.+||+++.+.++.+++++|.+++...+++.+|+
T Consensus 171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~ 250 (341)
T KOG1163|consen 171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCK 250 (341)
T ss_pred ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccccccccc
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 295 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 295 (473)
++|.||.-++.+|..+.+++.|++..|.++|+-+|...+.++|+.|||+.++.+
T Consensus 251 G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lkqk 304 (341)
T KOG1163|consen 251 GFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQK 304 (341)
T ss_pred CCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998754
No 2
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-57 Score=431.39 Aligned_cols=290 Identities=61% Similarity=1.044 Sum_probs=281.2
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEE-cccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-NVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~-~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+++-.|+++++||+|+||++++|++..+++.||||+ -.+.+.+++..|.+.++.|.+..+|+.+++|+.++.+.+||||
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 678899999999999999999999999999999999 5667789999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEee--CCCCCcEEEEecCCcccccCCCC
Q 011988 83 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL--GRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~--~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
++|.||+|+++.|+++|+.+++++|+.||+.-++|+|++.+|.|||||+|+||+. ..+...|.|+|||+|+.+.++.+
T Consensus 105 LLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 105 LLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred hhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 9999999999999999999999999999999999999999999999999999985 23456799999999999999999
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
++|+||++.+.+.||.+||+.+.++|.++++++|+.|||-|++++|.|.+||+++++.+.+++|++|.+++..++++.||
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc 264 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLC 264 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccccccc
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 293 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 293 (473)
.++|.+|..++.+...+++++-|+|+.++.+|.+++.+.|...|+.|||..+.
T Consensus 265 ~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln 317 (449)
T KOG1165|consen 265 EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN 317 (449)
T ss_pred hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence 99999999999999999999999999999999999999999999999999875
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-50 Score=385.79 Aligned_cols=254 Identities=22% Similarity=0.332 Sum_probs=214.8
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEc----ccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN----VKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~----~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.+.+.++.||+|+.|+||++.++.+++.+|+|++ ......++.+|+++++.++++.+|.++..|...+....|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 3677889999999999999999999999999996 344466789999999999755555555555444446899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|| +|||.++++.. +.+++..+-.|+.+|++||.|||+ ++||||||||+|||| +..|.|||||||.++.+.+..
T Consensus 159 YMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS~- 233 (364)
T KOG0581|consen 159 YMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNSI- 233 (364)
T ss_pred hcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhhh-
Confidence 99 89999999854 579999999999999999999995 999999999999999 589999999999999887753
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCC--CCCCHHHHHHHHhhccccccHHH
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL--KAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~--~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
..+++||..|||||.+.|..|+.++||||||++|+||++|++||... ......+.+..|.....+ .
T Consensus 234 --------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP----~ 301 (364)
T KOG0581|consen 234 --------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPP----R 301 (364)
T ss_pred --------cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCC----C
Confidence 26789999999999999999999999999999999999999999763 234556666666654433 3
Q ss_pred HhcC-CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 239 LCRG-YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 239 l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
++.+ ++++|++||..||.+||.+||++.+| +++.|.+.-
T Consensus 302 lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qL---l~Hpfi~~~ 341 (364)
T KOG0581|consen 302 LPEGEFSPEFRSFVSCCLRKDPSERPSAKQL---LQHPFIKKF 341 (364)
T ss_pred CCcccCCHHHHHHHHHHhcCCcccCCCHHHH---hcCHHHhhc
Confidence 3444 89999999999999999999997766 777777643
No 4
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-48 Score=385.53 Aligned_cols=268 Identities=25% Similarity=0.360 Sum_probs=225.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc------CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~------~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
-.++|.+++.||+|+|++||+|+++.+++.||||++.+ .+.+-+..|-.+|.+|.+|++|..++..+.+....|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 35789999999999999999999999999999998433 344557889999999999999999999999999999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+|+||+ +|+|.++|+.. +.|++..+..++.||+.||+|||++|||||||||+|||| +.++++||+|||.|+.+..
T Consensus 151 FvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCCh
Confidence 999999 99999999854 579999999999999999999999999999999999999 5899999999999998876
Q ss_pred CCCccccc----ccc--CCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011988 158 TATHQHIP----YRE--NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 231 (473)
Q Consensus 158 ~~~~~~~p----~~~--~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 231 (473)
....+.-+ +.. ...++||..|.+||++.....++.+|||+||||||+|+.|.+||.+.+..-..+++..+ .
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l---~ 303 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL---D 303 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh---c
Confidence 54321111 111 25699999999999999999999999999999999999999999886554444443332 2
Q ss_pred ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCccccccccc
Q 011988 232 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 294 (473)
Q Consensus 232 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 294 (473)
. .+..++|+.+.+||.++|..||.+|++.++|.+. .+...+||+.+-.
T Consensus 304 y-----~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H----------pFF~~Vdw~nlw~ 351 (604)
T KOG0592|consen 304 Y-----EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH----------PFFEGVDWENLWQ 351 (604)
T ss_pred c-----cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC----------cccccCChhhhhh
Confidence 2 3457899999999999999999999998766442 4455677777543
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.7e-49 Score=381.16 Aligned_cols=259 Identities=24% Similarity=0.329 Sum_probs=212.0
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----------chhHHHHHHHHHHhcCCCCCCeeEEeeEe
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----------HPQLQYEAKLYKILQGGTGIPNLRWFGVE 73 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----------~~~l~~E~~il~~L~~~~~i~~~~~~~~~ 73 (473)
.+.+.|.+.+.||+|+||.|-+|..+.+|+.||||++.+.. ...+.+|++||++|+|+ +|..++.+.+.
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP-~IV~~~d~f~~ 247 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHP-NIVRIKDFFEV 247 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCC-CEEEEeeeeec
Confidence 46778999999999999999999999999999999854432 22357999999999954 55566667777
Q ss_pred CCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 74 GDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 74 ~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
.++.||||||+ ||.|.+.+-. ++.+.+.....++.||+.||.|||++||+||||||+|||+..+..+..+||+|||+|
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~-nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVA-NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred CCceEEEEEEecCccHHHHHHh-ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 88889999999 8999999873 556889999999999999999999999999999999999987667789999999999
Q ss_pred ccccCCCCccccccccCCCcccCccccccccccCCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 229 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~---~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~ 229 (473)
+...... ...+++||+.|.|||++.+.. +..++|||||||+||-+++|.+||.+..... ...+.|..
T Consensus 327 K~~g~~s--------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~eQI~~ 396 (475)
T KOG0615|consen 327 KVSGEGS--------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLKEQILK 396 (475)
T ss_pred hccccce--------ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHHHHHhc
Confidence 9875332 136789999999999998765 3458899999999999999999998754332 12334444
Q ss_pred ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 230 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 230 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
.+.. ..+..+..++++..+||..||..||++||+++++ |++.|.+
T Consensus 397 G~y~-f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~ea---L~hpW~~ 441 (475)
T KOG0615|consen 397 GRYA-FGPLQWDRISEEALDLINWMLVVDPENRPSADEA---LNHPWFK 441 (475)
T ss_pred Cccc-ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHH---hcChhhh
Confidence 3332 2234456788999999999999999999997766 6666654
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-47 Score=390.23 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=221.4
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc------CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~------~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
.+|+..+.||+|||+.||.+++..+|+.||+|++.+ .....+.+|++|.+.|+ |++|+.++.|+++.++.|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 579999999999999999999999999999999544 23456899999999999 55566777788999999999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
+|+| .++|..+++ ..+.+++.+++.++.||+.||.|||+++|||||||..|+|| +++.+|||+|||||..+..+.
T Consensus 97 LELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 97 LELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCcc
Confidence 9999 889999988 56789999999999999999999999999999999999999 478899999999999887553
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. ...+++||+.|.|||++.....+..+||||+|||||-||.|++||+. .+.++.|.+|.......
T Consensus 173 E-------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet---k~vkety~~Ik~~~Y~~----- 237 (592)
T KOG0575|consen 173 E-------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET---KTVKETYNKIKLNEYSM----- 237 (592)
T ss_pred c-------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc---chHHHHHHHHHhcCccc-----
Confidence 2 23678999999999999998999999999999999999999999976 34567777776655433
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFD 284 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~ 284 (473)
+..++.+.++||..+|..||.+||++++| |++-|-+.|+...
T Consensus 238 P~~ls~~A~dLI~~lL~~~P~~Rpsl~~v---L~h~Ff~~g~~p~ 279 (592)
T KOG0575|consen 238 PSHLSAEAKDLIRKLLRPNPSERPSLDEV---LDHPFFKSGFTPA 279 (592)
T ss_pred ccccCHHHHHHHHHHhcCCcccCCCHHHH---hcCHhhhCCCcCC
Confidence 34678999999999999999999997776 6676767766543
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-48 Score=375.43 Aligned_cols=250 Identities=26% Similarity=0.372 Sum_probs=207.0
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
...++|.+.++||.|+||+||+|+++.++..||||.+.+.. .+.+..|+.+|+.|+ |++|..+..+....++.|
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEE
Confidence 45678999999999999999999999999999999865553 445789999999999 556667777888889999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCC---CcEEEEecCCccc
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA---NQVYIIDFGLAKR 154 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~---~~vkL~DFGla~~ 154 (473)
+||||| ||+|.+++.. .+.+++.++..++.||+.||++||+++||||||||+||||+..... -.+||+|||+|+.
T Consensus 86 lVMEyC~gGDLs~yi~~-~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRR-RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EEEEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 999999 8999999985 4479999999999999999999999999999999999999864222 5799999999998
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
+.... ...+.+|++.|||||++..+.|+.|+|+||+|+|||+|++|+.||...+. .+....+... ..
T Consensus 165 L~~~~--------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~---~eL~~~~~k~--~~ 231 (429)
T KOG0595|consen 165 LQPGS--------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP---KELLLYIKKG--NE 231 (429)
T ss_pred CCchh--------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH---HHHHHHHhcc--cc
Confidence 87543 23578999999999999999999999999999999999999999987443 3333333222 12
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
.+..+...+...+.+++...+..++.+|-++.+.
T Consensus 232 ~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 232 IVPVLPAELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred ccCchhhhccCchhhhhhHHHhcCccccCchHHh
Confidence 2233334456677799999999999999886543
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-47 Score=366.00 Aligned_cols=264 Identities=22% Similarity=0.297 Sum_probs=219.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.++|++++.||+|+||.||+++.+.+++.+|+|++.+. .......|..||..++ |+.|+.+.+.+++.+..|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCeEEE
Confidence 57899999999999999999999999999999985553 3455788999999987 5555556666677888899
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|+||+ ||.|...++. .+.|++..+..++..|+.||.|||++|||||||||+|||| +..|+++|+|||+|+.....
T Consensus 103 Vld~~~GGeLf~hL~~-eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQR-EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EEeccCCccHHHHHHh-cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccC
Confidence 99999 8899999884 5579999999999999999999999999999999999999 58999999999999966554
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
... ..+++||+.|||||++.+..|+..+|+||||+++|||++|..||.+. +....+++|...+...
T Consensus 179 ~~~-------t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~---~~~~~~~~I~~~k~~~---- 244 (357)
T KOG0598|consen 179 GDA-------TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE---DVKKMYDKILKGKLPL---- 244 (357)
T ss_pred CCc-------cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc---cHHHHHHHHhcCcCCC----
Confidence 332 25689999999999999999999999999999999999999999873 4566777777666322
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCC----CHHHHHHHHHHHHHHhCCCCCCccccccccccccc
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKP----DYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ 298 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RP----t~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~ 298 (473)
....++.+.++++..+|..||++|. ++.+| ....+....+|+.+.....+
T Consensus 245 ~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~i----------k~HpfF~~inW~~l~~k~l~ 298 (357)
T KOG0598|consen 245 PPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEI----------KRHPFFKGINWEKLLAKKLS 298 (357)
T ss_pred CCccCCHHHHHHHHHHhccCHHHhcCCCCChHHh----------hcCcccccCCHHHHHhcCCC
Confidence 1223789999999999999999995 33332 22355667899987655443
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-48 Score=363.22 Aligned_cols=243 Identities=24% Similarity=0.320 Sum_probs=206.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEc-----ccCCchhHHHHHHHHHHhcCCCCCCeeE-EeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-----VKTKHPQLQYEAKLYKILQGGTGIPNLR-WFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~-----~~~~~~~l~~E~~il~~L~~~~~i~~~~-~~~~~~~~~~lv 80 (473)
.+|+|+++||.|+||+||++.+..+|..||.|.+ ......++..|+.+|++|+|+|+|.++. .|..+.+..+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4599999999999999999999999999999963 3334566889999999999999888887 455566668999
Q ss_pred EecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHh--CC--CcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 81 IDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHS--KS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~--~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
||+| +|+|.++++. .++.+++.++|+++.|++.||..+|+ .. |+||||||.||+|+ .+|.|||+|||++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~---~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT---ANGVVKLGDFGLG 175 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc---CCCceeeccchhH
Confidence 9999 8999999863 34569999999999999999999999 45 99999999999995 8899999999999
Q ss_pred ccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 232 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 232 (473)
+.+....+. ..+++||+.||+||.+.+..|++++||||+||++|||+.-..||.+. ...+.-.+|.....
T Consensus 176 r~l~s~~tf-------A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~---n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 176 RFLSSKTTF-------AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD---NLLSLCKKIEQGDY 245 (375)
T ss_pred hHhcchhHH-------HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc---cHHHHHHHHHcCCC
Confidence 998776543 25689999999999999999999999999999999999999999985 33444455555444
Q ss_pred cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCH
Q 011988 233 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 233 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 265 (473)
++... ..++.++..||..|+..|++.||+.
T Consensus 246 ~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 246 PPLPD---EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred CCCcH---HHhhhHHHHHHHHHccCCcccCCCc
Confidence 32221 3467899999999999999999984
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.6e-46 Score=352.76 Aligned_cols=252 Identities=20% Similarity=0.276 Sum_probs=206.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCch-----hHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-----QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~-----~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
++|+.+.++|+|+||.||+|+++.||+.||||.+...... -..+|+++|++|.|.|.|..+.. +......++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEV-FrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEV-FRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHH-HHhcceeEEEe
Confidence 5799999999999999999999999999999996554432 25789999999997777665544 45566789999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|||..++.+.+......++.+.+..++.|++.|+.|+|++++|||||||+||||+ ..+.+||||||+|+.+..+..
T Consensus 81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gvvKLCDFGFAR~L~~pgd- 156 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGVVKLCDFGFARTLSAPGD- 156 (396)
T ss_pred eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCcEEeccchhhHhhcCCcc-
Confidence 9999988888887777899999999999999999999999999999999999996 889999999999998875332
Q ss_pred cccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc-------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS------- 233 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------- 233 (473)
.-+.++.|.+|.|||.+.| .+|+..+||||+||++.||++|...|.+..+.+....+.+......+
T Consensus 157 ------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 157 ------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred ------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 1145688999999999998 56999999999999999999999999997665544444433222111
Q ss_pred ----------------ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 234 ----------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 234 ----------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.+++.-..+++.-+.+|++.||..||++|++.++|.
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence 122222234456788999999999999999988874
No 11
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-45 Score=368.66 Aligned_cols=255 Identities=24% Similarity=0.368 Sum_probs=208.6
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcE-EEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEE-VAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~-vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
....+.+.||.|+||+||+|.+. |+. ||||++.... ...|.+|+.+|.+|+|+|+|..+..+.......+||
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEE
Confidence 34566777999999999999964 555 9999865544 347999999999999777776554443333368999
Q ss_pred EecC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccCCCCCcEEEeeCCCCC-cEEEEecCCccccc
Q 011988 81 IDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYR 156 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~-~~~~ls~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~-~vkL~DFGla~~~~ 156 (473)
|||+ +|+|.+++.. .+..+++..++.|+.||+.||+|||+++ ||||||||+|||++ ... ++||+|||+++...
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~---~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD---LKGKTLKIADFGLSREKV 195 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc---CCCCEEEECCCccceeec
Confidence 9999 9999999986 3778999999999999999999999999 99999999999994 665 99999999998765
Q ss_pred CCCCccccccccCCCcccCcccccccccc--CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHL--GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~--~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
.... ......||..|||||++. ...|+.|+||||||++||||+||+.||.++.. .+....+.......
T Consensus 196 ~~~~-------~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---~~~~~~v~~~~~Rp 265 (362)
T KOG0192|consen 196 ISKT-------SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---VQVASAVVVGGLRP 265 (362)
T ss_pred cccc-------cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcCCCC
Confidence 4321 123468999999999999 55899999999999999999999999998764 33333343333333
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
. +...+|+.+..+|..||..||+.||++.+|...|+.+....
T Consensus 266 ~---~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 266 P---IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred C---CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 2 23458999999999999999999999999999999887644
No 12
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-46 Score=370.75 Aligned_cols=263 Identities=23% Similarity=0.314 Sum_probs=214.6
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCC-eEE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGD-YNV 78 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~-~~~ 78 (473)
.+-++|.++++||.|.||.||+|+.+.+++.||||.+++.-. -.-.+|++.|++|+.|++|..+..+..+.+ ..+
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 456789999999999999999999999999999998544322 124689999999995555555554444444 899
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 79 lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
+|||||.++|.++++..++.|++..+..|+.||++||+|+|.+|+.||||||+|||+. ....|||+|||+|+.....
T Consensus 87 fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~---~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 87 FVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS---GNDVIKIADFGLAREVRSK 163 (538)
T ss_pred eeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec---ccceeEecccccccccccC
Confidence 9999999999999998888999999999999999999999999999999999999994 5789999999999977654
Q ss_pred CCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc------
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------ 231 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~------ 231 (473)
. || +.++.|.+|.|||+++.. .|+.+.||||+|||++|+.+-++.|.|....+...++-.+....
T Consensus 164 p-----PY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 164 P-----PY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred C-----Cc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 3 33 457899999999998754 58999999999999999999999999976554444443333221
Q ss_pred ----------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 232 ----------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 232 ----------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
....+..+...++.++.++|..|+.+||++|||+.++ |+..|-+.+
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~a---l~~pffq~~ 297 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQA---LQHPFFQVG 297 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHH---hcCcccccc
Confidence 1233455566678999999999999999999998887 555554444
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-45 Score=361.19 Aligned_cols=259 Identities=24% Similarity=0.386 Sum_probs=207.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCC-eEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD-YNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~-~~~lv~e 82 (473)
.+|...+.||+|+||.||++.+.++|+.+|||...... ...+.+|+.+|..|+|+++|..+........ .++|.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45889999999999999999999999999999855554 4458999999999995444444433233333 7899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC-CCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +|+|.+++...+.+|++..+..++.||++||+|||++|||||||||+|||++ . ++.+||+|||+++.......
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~---~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD---PSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe---CCCCeEEeccCccccccccccc
Confidence 99 9999999997665899999999999999999999999999999999999995 5 68999999999987764111
Q ss_pred ccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. ......+.||+.|||||++.. ....+++|||||||++.||+||+.||.+. ......+..+.... ..+.+
T Consensus 174 ~----~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~---~~P~i 244 (313)
T KOG0198|consen 174 K----SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGRED---SLPEI 244 (313)
T ss_pred c----ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccC---CCCCC
Confidence 1 122345789999999999995 34556999999999999999999999874 22223333333332 22256
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
+..++++.++|+..|+..||++|||+++| |++.|.+..
T Consensus 245 p~~ls~~a~~Fl~~C~~~~p~~Rpta~eL---L~hpf~~~~ 282 (313)
T KOG0198|consen 245 PDSLSDEAKDFLRKCFKRDPEKRPTAEEL---LEHPFLKQN 282 (313)
T ss_pred CcccCHHHHHHHHHHhhcCcccCcCHHHH---hhChhhhcc
Confidence 67789999999999999999999998877 667776543
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-45 Score=365.77 Aligned_cols=258 Identities=23% Similarity=0.289 Sum_probs=214.7
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEe-CCe
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVE-GDY 76 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~-~~~ 76 (473)
++-.+.|+.+++||+|.||.||+|++..+|+.||+|.+.... .....+|+.||++|.|+++|.....+... ...
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 345577999999999999999999999999999999743322 22367999999999988777766555554 578
Q ss_pred EEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 77 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
.|||+|||..+|..++....-+|++.++..++.||+.||+|||++||+|||||.+|||| +..|.+||+|||||+.+.
T Consensus 193 iYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 193 IYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeecc
Confidence 99999999999999998666689999999999999999999999999999999999999 589999999999999887
Q ss_pred CCCCccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc----
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK---- 231 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~---- 231 (473)
...... .+..+-|..|.|||+++|.. |+.++|+||.||||.||++|++.|++.+..+...++.++....
T Consensus 270 ~~~~~~------~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~ 343 (560)
T KOG0600|consen 270 PSGSAP------YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDY 343 (560)
T ss_pred CCCCcc------cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhc
Confidence 654322 24567899999999999975 9999999999999999999999999976655555554443211
Q ss_pred -----------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 -----------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 -----------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
....+.+.++.+|....+|+..+|.+||++|.|+.+.+
T Consensus 344 W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 344 WPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred cccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 11223444567889999999999999999999988764
No 15
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=359.42 Aligned_cols=246 Identities=25% Similarity=0.330 Sum_probs=207.4
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCC
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 75 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~ 75 (473)
...++|.+.+.||+|+||.|++|.+..+++.||||++.+. ....+.+|+.+++.+.+|++|..+..+.....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3467899999999999999999999999999999985543 23456789999999997767777777777777
Q ss_pred eEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCC-CcEEEEecCCcc
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA-NQVYIIDFGLAK 153 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~-~~vkL~DFGla~ 153 (473)
..++||||+ ||+|.+++.. .+++.+.++..++.||+.||+|||++||+||||||+|||++ .+ +.+||+|||++.
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld---~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD---GNEGNLKLSDFGLSA 169 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec---CCCCCEEEecccccc
Confidence 799999999 7799999986 67899999999999999999999999999999999999995 55 899999999998
Q ss_pred ccc-CCCCccccccccCCCcccCccccccccccCCC-C-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011988 154 RYR-DTATHQHIPYRENKNLTGTARYASMNTHLGIE-Q-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 230 (473)
Q Consensus 154 ~~~-~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~-s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 230 (473)
... ... ...+.+||+.|+|||++.+.. | +.++||||+||+||.|++|..||.+.+ ....+.++...
T Consensus 170 ~~~~~~~--------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~---~~~l~~ki~~~ 238 (370)
T KOG0583|consen 170 ISPGEDG--------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN---VPNLYRKIRKG 238 (370)
T ss_pred ccCCCCC--------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc---HHHHHHHHhcC
Confidence 773 211 236789999999999999987 7 589999999999999999999998833 33334444443
Q ss_pred cccccHHHHhcCC-cHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 KVSTSIEALCRGY-PTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 ~~~~~~~~l~~~~-p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.+. ++..+ ++++..++..||..||.+|+++.+|.
T Consensus 239 ~~~-----~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 239 EFK-----IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred Ccc-----CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 332 23445 89999999999999999999977774
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-44 Score=336.27 Aligned_cols=268 Identities=22% Similarity=0.296 Sum_probs=224.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc------hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~------~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
-.++|++++.||.|+||.|.+++.+.+|..+|+|++.+... +...+|..+|+.+. ++.+..+.+.+.+....+
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEE
Confidence 45789999999999999999999999999999999766542 33678999999999 667777777788899999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
|||||. ||-|..++..+ ++|++..++.++.||+.||+|||+++|++|||||+|||| +..|.+||+|||+|+....
T Consensus 121 mvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecC
Confidence 999999 88999999854 479999999999999999999999999999999999999 5899999999999998765
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
.. .+.|||+.|+|||++....|+.++|.|||||++|||+.|..||...+. .+.|++|.+.++.-
T Consensus 197 rT----------~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~---~~iY~KI~~~~v~f--- 260 (355)
T KOG0616|consen 197 RT----------WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP---IQIYEKILEGKVKF--- 260 (355)
T ss_pred cE----------EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh---HHHHHHHHhCcccC---
Confidence 42 467999999999999999999999999999999999999999987543 77888888877643
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCccccccccccccccC
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVS 300 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~ 300 (473)
+..++.++++|+..+|+.|-.+|- ..+..--+++ .+.+|....+|........+.+
T Consensus 261 --P~~fs~~~kdLl~~LL~vD~t~R~--gnlknG~~dI---k~H~wF~~v~W~~i~~r~ie~P 316 (355)
T KOG0616|consen 261 --PSYFSSDAKDLLKKLLQVDLTKRF--GNLKNGVEDI---KNHPWFKGVDWEAILQRKIEPP 316 (355)
T ss_pred --CcccCHHHHHHHHHHHhhhhHhhh--cCcCCCcccc---ccCcccccccHHHHhhccccCC
Confidence 456789999999999999999982 1122111222 2345666889998766544433
No 17
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.3e-43 Score=355.49 Aligned_cols=260 Identities=19% Similarity=0.327 Sum_probs=201.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEc-----CCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeE-EeeEeC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLR-WFGVEG 74 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~-~~~~~~ 74 (473)
-.++|++.++||.|+||.||+|.+. .+++.||||++.... ...+..|+.++..+.+|++|..+. .+....
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 3578999999999999999999752 345689999865432 235788999999995455554444 444445
Q ss_pred CeEEEEEecC-CCCHHHHHHHcC---------------------------------------------------------
Q 011988 75 DYNVLVIDLL-GPSLEDLFNFCS--------------------------------------------------------- 96 (473)
Q Consensus 75 ~~~~lv~e~~-g~sL~~~l~~~~--------------------------------------------------------- 96 (473)
...+++|||+ +++|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 6689999999 889999987431
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccCCCc
Q 011988 97 ----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNL 172 (473)
Q Consensus 97 ----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~ 172 (473)
..+++.+++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++....... +......
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~-----~~~~~~~ 236 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPD-----YVRKGSA 236 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcc-----hhcccCC
Confidence 2478889999999999999999999999999999999994 678999999999986543221 1112234
Q ss_pred ccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHH
Q 011988 173 TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYF 251 (473)
Q Consensus 173 ~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li 251 (473)
.++..|+|||++.+..++.++|||||||+||||++ |..||.+..... .....+..... ......+++++.+++
T Consensus 237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~l~~li 310 (338)
T cd05102 237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EFCQRLKDGTR----MRAPENATPEIYRIM 310 (338)
T ss_pred CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HHHHHHhcCCC----CCCCCCCCHHHHHHH
Confidence 56788999999999999999999999999999997 999998754321 11122221111 112346789999999
Q ss_pred HHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 252 HYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 252 ~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
..||+.||++||++.+|++.|++++.+
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999998753
No 18
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-44 Score=360.75 Aligned_cols=252 Identities=24% Similarity=0.350 Sum_probs=206.2
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc--CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK--TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~--~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+++++.||+|-||+||+|.+. ....||+|.+.. .....+.+|+++|+.|+|.++| .++.++..++..+|||||+ .
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV-~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLV-KLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCcccCeE-EEEEEEecCCceEEEEEeccc
Confidence 456789999999999999974 344799998544 2345688999999999966555 5555666666899999999 8
Q ss_pred CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 86 PSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 86 ~sL~~~l~~-~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
|+|.+++.. .+..+...+.+.++.|||+|++||+++++|||||...||||+ ++..+||+|||+|+...++..
T Consensus 286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~---~~~~vKIsDFGLAr~~~d~~Y---- 358 (468)
T KOG0197|consen 286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD---EDLVVKISDFGLARLIGDDEY---- 358 (468)
T ss_pred CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec---cCceEEEcccccccccCCCce----
Confidence 999999986 456799999999999999999999999999999999999994 788999999999996555433
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
.......-...|.|||.+....++.|||||||||+||||+| |+.||.++...+..+.+++..... -+.+|
T Consensus 359 --~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp-------~P~~C 429 (468)
T KOG0197|consen 359 --TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLP-------RPEGC 429 (468)
T ss_pred --eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCC-------CCCCC
Confidence 12222334568999999999999999999999999999999 999999876544333333322221 23579
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
|+++.++|..||..+|++||||+.|...|++++..
T Consensus 430 P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 430 PDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999998753
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.1e-44 Score=361.54 Aligned_cols=251 Identities=23% Similarity=0.329 Sum_probs=214.4
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchh-----HHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-----LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~-----l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+....+ +.+|++|++.|+|+++|..+.+|. .....|+|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE-t~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE-TSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc-ccceEEEEe
Confidence 67999999999999999999999999999999987776655 899999999999888777776664 556679999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||+-|+|..++.. ..+++++.+..|+.|++.||.|||+++|+|||+||.|||+ +..+.+|+||||+|+.......
T Consensus 81 e~a~g~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~- 155 (808)
T KOG0597|consen 81 EYAVGDLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS- 155 (808)
T ss_pred hhhhhhHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce-
Confidence 9998899999984 5689999999999999999999999999999999999999 5889999999999997655322
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
-.....||+.|||||+..+.+|+..+|+||||||+||++.|++||.. ....+....|.......+.
T Consensus 156 ------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a---~si~~Lv~~I~~d~v~~p~----- 221 (808)
T KOG0597|consen 156 ------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA---RSITQLVKSILKDPVKPPS----- 221 (808)
T ss_pred ------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH---HHHHHHHHHHhcCCCCCcc-----
Confidence 12456899999999999999999999999999999999999999965 3445555555555444332
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
..+..|.+|++.+|.+||..|.+..+| +.+.|.+..
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~L---l~HpF~k~~ 257 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDL---LGHPFWKGK 257 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHH---hcChHHhhh
Confidence 567899999999999999999996665 666666554
No 20
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.7e-43 Score=354.95 Aligned_cols=272 Identities=22% Similarity=0.316 Sum_probs=214.5
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.++|++++.||+|+||.||+|+.+.||+.+|+|++.+.. ...+..|-.+|... ..+.|+.+++.+.+.++.||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCeeEE
Confidence 478999999999999999999999999999999966543 33467888999984 47778888888899999999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
||||+ ||++..+|.. ...|++..+..++.+++.||+.||+.|||||||||+|+|| |..|++||+|||||..+...
T Consensus 219 iMEylPGGD~mTLL~~-~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR-KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHh-cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhhh
Confidence 99999 9999999984 5679999999999999999999999999999999999999 58999999999999754321
Q ss_pred CC------------------cccccc----c------------------cCCCcccCccccccccccCCCCCchhhHHHH
Q 011988 159 AT------------------HQHIPY----R------------------ENKNLTGTARYASMNTHLGIEQSRRDDLESL 198 (473)
Q Consensus 159 ~~------------------~~~~p~----~------------------~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSl 198 (473)
.. ....+. + .....+||+.|||||++++..|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 00 000010 0 1235789999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 199 GYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 199 GviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
||||||||.|.+||.+.+. .+.+.+|..-+.....+ -...+.++.++||.+|+. ||++|....-+.++-.
T Consensus 375 G~ImyEmLvGyPPF~s~tp---~~T~rkI~nwr~~l~fP-~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~----- 444 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETP---QETYRKIVNWRETLKFP-EEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK----- 444 (550)
T ss_pred HHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhhhccCC-CcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc-----
Confidence 9999999999999988554 44444444322111000 012456899999999999 9999976333333222
Q ss_pred hCCCCCCccccccccc
Q 011988 279 EGFQFDYVFDWTILKY 294 (473)
Q Consensus 279 ~~~~~~~~~dw~~~~~ 294 (473)
.++...++|+.+..
T Consensus 445 --HPfF~~v~W~~l~~ 458 (550)
T KOG0605|consen 445 --HPFFKGVDWDHLRE 458 (550)
T ss_pred --CCccccCCcchhhc
Confidence 35566789998753
No 21
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-43 Score=360.91 Aligned_cols=267 Identities=22% Similarity=0.295 Sum_probs=223.5
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
-.++|.++++||+|+||.|+++..+.+++.+|||++++. .......|.+|+.....|+.+..++.++...++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 357899999999999999999999999999999986554 34568889999999999999999999999999999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+||||+ ||++..+. ....|++..+..++..|+.||+|||++|||+||||.+|||| |..|.+||+|||+|+....
T Consensus 446 fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccCC
Confidence 999999 66643332 34679999999999999999999999999999999999999 5899999999999987553
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
... ...+++||+.|||||++.+..|+..+|+|||||+|||||.|..||.+.+ ..+..+.|.......
T Consensus 521 ~g~-------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd---Eee~FdsI~~d~~~y--- 587 (694)
T KOG0694|consen 521 QGD-------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD---EEEVFDSIVNDEVRY--- 587 (694)
T ss_pred CCC-------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHhcCCCCC---
Confidence 222 2468999999999999999999999999999999999999999999854 445555555544332
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCH-----HHHHHHHHHHHHHhCCCCCCccccccccccccccCC
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDY-----AYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQVST 301 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~-----~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~~ 301 (473)
+..++.+..+||+.+|..+|++|..+ ++|. .+ .+....||+.+...+.+++.
T Consensus 588 --P~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~---~h-------pFFr~i~w~~L~~r~i~PPf 644 (694)
T KOG0694|consen 588 --PRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIK---KH-------PFFRSIDWDDLLNRRIKPPF 644 (694)
T ss_pred --CCcccHHHHHHHHHHhccCcccccCCCCCCchhhh---hC-------CccccCCHHHHhhccCCCCC
Confidence 34678999999999999999999865 2332 22 44556789998877666544
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=358.38 Aligned_cols=253 Identities=21% Similarity=0.341 Sum_probs=210.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
...|...++||+|+.|.||.|....+++.||||.+.... .+-+..|+.+|+.++|.++|.++..|-.. +..|+|||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-deLWVVME 350 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-DELWVVME 350 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-ceeEEEEe
Confidence 356888999999999999999999999999999854433 34478999999999988888888776655 77899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ |++|.|++.. ..+++.++..|+.+++.||+|||.+||+|||||.+|||++ .++.+||+|||+|..+.....
T Consensus 351 ym~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~---~~g~vKltDFGFcaqi~~~~~- 424 (550)
T KOG0578|consen 351 YMEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT---MDGSVKLTDFGFCAQISEEQS- 424 (550)
T ss_pred ecCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---cCCcEEEeeeeeeeccccccC-
Confidence 99 8899999983 3599999999999999999999999999999999999995 778899999999998876544
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
...+.+||+.|||||+.....|++++||||||+|++||+.|.+||-..+. .+.+..|....... -....
T Consensus 425 ------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P---lrAlyLIa~ng~P~--lk~~~ 493 (550)
T KOG0578|consen 425 ------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP---LRALYLIATNGTPK--LKNPE 493 (550)
T ss_pred ------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh---HHHHHHHhhcCCCC--cCCcc
Confidence 23678999999999999999999999999999999999999999976333 22222222221111 11234
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
.++++|++|+.+||..|+++|+++.+| |++-|.+.
T Consensus 494 klS~~~kdFL~~cL~~dv~~RasA~eL---L~HpFl~~ 528 (550)
T KOG0578|consen 494 KLSPELKDFLDRCLVVDVEQRASAKEL---LEHPFLKM 528 (550)
T ss_pred ccCHHHHHHHHHHhhcchhcCCCHHHH---hcChhhhh
Confidence 678999999999999999999998777 66666543
No 23
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.9e-43 Score=333.89 Aligned_cols=252 Identities=20% Similarity=0.223 Sum_probs=205.0
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCch-----hHHHHHHHHHHhcCCCCCCeeEEe--eEeCCeEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-----QLQYEAKLYKILQGGTGIPNLRWF--GVEGDYNV 78 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~-----~l~~E~~il~~L~~~~~i~~~~~~--~~~~~~~~ 78 (473)
.+.|+.+.+|++|+||.||+|+++.|++.||+|.+...... ...+|+.+|..++|+ +|+.+..+ +..-+..|
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~-NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHP-NIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCC-CeeeeEEEEeccccceee
Confidence 35799999999999999999999999999999985443322 267999999999954 55555433 45667799
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 79 lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
||||||..+|..+++...++|...++..++.|++.||+|||.+.|+|||||++|+|++ +.|.+||+|||+|+.+...
T Consensus 154 ~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~---~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 154 IVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS---HKGILKIADFGLAREYGSP 230 (419)
T ss_pred eeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec---cCCcEEecccchhhhhcCC
Confidence 9999999999999998888999999999999999999999999999999999999995 8899999999999998775
Q ss_pred CCccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc----
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS---- 233 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~---- 233 (473)
.. ..+..+-|..|.|||+++|.. |+...|+||+|||+.||+++++-|.|....+...++.++....-.
T Consensus 231 ~k-------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwp 303 (419)
T KOG0663|consen 231 LK-------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWP 303 (419)
T ss_pred cc-------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCC
Confidence 32 224568899999999999875 999999999999999999999999997665555444443221100
Q ss_pred ---------------ccHHHHh---c--CCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 234 ---------------TSIEALC---R--GYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 234 ---------------~~~~~l~---~--~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
.+...+. . ++++.-.+|+..+|.+||.+|.|+.+.
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~ 358 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDG 358 (419)
T ss_pred CccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHh
Confidence 0001111 1 134778899999999999999998876
No 24
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.7e-43 Score=323.85 Aligned_cols=252 Identities=19% Similarity=0.217 Sum_probs=205.7
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.+|..+++||+|.||.||+|++..+|+.||||.+...+ .....+|++.|+.++|.++|..++. +......-||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-FPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-ccCCCceEEEE
Confidence 57899999999999999999999999999999854433 2347899999999996666655554 45556678999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||+..+|+..++.....++..++..++.+++.||+|||++.|+||||||.|+||+ .++.+||+|||+|+.+......
T Consensus 81 Efm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 81 EFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred EeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEeecccchhccCCCCcc
Confidence 9999999999998778899999999999999999999999999999999999995 8899999999999998765542
Q ss_pred cccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc-------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS------- 233 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------- 233 (473)
. ...+-|..|.|||.+.|.. |+..+||||.|||+.||+.|.+-|.|..+.+....+..+......
T Consensus 158 ~-------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 158 Q-------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred c-------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccc
Confidence 2 2237799999999999865 899999999999999999999999886654443333333221111
Q ss_pred -------------ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 234 -------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 234 -------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.....+....+.+..+|+..||.+||.+|+++.++.
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL 279 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQAL 279 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHh
Confidence 111223445577889999999999999999977663
No 25
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=6.2e-42 Score=337.58 Aligned_cols=252 Identities=19% Similarity=0.249 Sum_probs=198.6
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|++.++||.|+||.||+|.+..+++.||+|++... ....+.+|+.+++.++|++ |..+..+.......++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHAN-IVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCC-EeeEEEEEcCCCeEEEEEe
Confidence 5799999999999999999999999999999985432 2335778999999998655 4455556667778999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 83 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 83 ~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
|+.++|.+++......+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 84 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~DfG~~~~~~~~~~-- 158 (288)
T cd07871 84 YLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGELKLADFGLARAKSVPTK-- 158 (288)
T ss_pred CCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEECcCcceeeccCCCc--
Confidence 998899999886666789999999999999999999999999999999999994 778999999999976433211
Q ss_pred ccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc---------
Q 011988 163 HIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV--------- 232 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--------- 232 (473)
......|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+........
T Consensus 159 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 159 -----TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred -----cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence 1134578999999999876 4589999999999999999999999987543222222211111000
Q ss_pred -------------cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 233 -------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 233 -------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
..........++.++.++|..||.+||.+|||+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 0011112235678999999999999999999988875
No 26
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-42 Score=354.23 Aligned_cols=251 Identities=21% Similarity=0.298 Sum_probs=212.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-C-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-K-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.+-|++++.||.|+-|.|-+|++..||+.+|||++.+. . ...+++|+-||+.|.|+|++..++ +.....+.|+
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~Lyd-Vwe~~~~lyl 89 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYD-VWENKQHLYL 89 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeee-eeccCceEEE
Confidence 46799999999999999999999999999999996665 2 345899999999999776665554 4456667788
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|.||+ ||-|.+++-. ++++++.++.+++.||+.|+.|+|..+|+||||||+|+||+ ..+.+||+|||+|..-...
T Consensus 90 vlEyv~gGELFdylv~-kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd---~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVR-KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLD---VKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EEEecCCchhHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhh---cccCEeeeccceeecccCC
Confidence 88888 9999999874 56899999999999999999999999999999999999994 6667999999999765433
Q ss_pred CCccccccccCCCcccCccccccccccCCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~-s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
. ...+.||++.|+|||++.|.+| +.++||||+|||||.||+|++||++ +.....+.++....+.
T Consensus 166 k--------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD---dNir~LLlKV~~G~f~---- 230 (786)
T KOG0588|consen 166 K--------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD---DNIRVLLLKVQRGVFE---- 230 (786)
T ss_pred c--------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC---ccHHHHHHHHHcCccc----
Confidence 2 2356799999999999999997 7999999999999999999999986 4556667777666654
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
++..++.+.++||.+||..||..|.|.++| |.+.|....
T Consensus 231 -MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI---~kHP~l~g~ 269 (786)
T KOG0588|consen 231 -MPSNISSEAQDLLRRMLDVDPSTRITTEEI---LKHPFLSGY 269 (786)
T ss_pred -CCCcCCHHHHHHHHHHhccCccccccHHHH---hhCchhhcC
Confidence 347889999999999999999999997766 667665443
No 27
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9e-42 Score=335.92 Aligned_cols=265 Identities=17% Similarity=0.226 Sum_probs=203.7
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.|++.+.||+|+||.||+|.+..+++.||||++.+.. ...+..|+.+++.+.|+++ ..+..+....+..+++|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-v~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFV-VSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcE-EEEEEEEccCCeEEEEE
Confidence 4899999999999999999999999999999854322 2246789999999986544 44555556777899999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++ +++.+||+|||++.......
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~---~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeCCCcEEcCCCC
Confidence 999 78998887643 34689999999999999999999999999999999999994 77899999999998654322
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. .....||..|+|||++.+..++.++|||||||+||||++|+.||.+.........+..... .....+
T Consensus 157 ~--------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~----~~~~~~ 224 (285)
T cd05631 157 T--------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK----EDQEEY 224 (285)
T ss_pred e--------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh----cccccC
Confidence 1 1245789999999999999999999999999999999999999987554322222222111 111223
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHH--HHHHHHHHHHHhCCCCCCcccccccccc
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAY--LKRLFRDLFIREGFQFDYVFDWTILKYQ 295 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~--l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 295 (473)
...++.++.+|+..||+.||++||++.+ +.+++++.+. ...+|..+...
T Consensus 225 ~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~-------~~~~~~~~~~~ 275 (285)
T cd05631 225 SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIF-------KNINFKRLEAN 275 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhh-------cCCCHHHHHhC
Confidence 4567899999999999999999997321 2333444432 23566666544
No 28
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.2e-41 Score=342.35 Aligned_cols=254 Identities=18% Similarity=0.235 Sum_probs=195.9
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEe----CCeEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVE----GDYNV 78 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~----~~~~~ 78 (473)
+|++.++||+|+||.||+|.+..+++.||||.+... ....+.+|+.+++.++|++++..+..+... ....+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 699999999999999999999999999999985421 223578899999999977666555443222 23579
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 79 lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
+||||++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 81 lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccccc
Confidence 9999999999999874 4469999999999999999999999999999999999999 47889999999999865432
Q ss_pred CCccccccccCCCcccCccccccccccC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH---------
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI--------- 227 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i--------- 227 (473)
.... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+...
T Consensus 157 ~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 157 TPTA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cCcc----ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 2111 01134579999999999876 57899999999999999999999999764421111111110
Q ss_pred --------------hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 228 --------------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 228 --------------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
...............+++++.++|..||..||++||++++++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l 288 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL 288 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHh
Confidence 011111222233346788999999999999999999988774
No 29
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=348.33 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=210.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc----CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
...|...+.||.|+||.||+|.+..+++.||||++.- ....+++.|+.+|..+++ .+|..++.....+...+++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~-~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS-PNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc-chHHhhhhheeecccHHHHH
Confidence 4568889999999999999999999999999999433 334568899999999986 55656666677888999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||| ||++.++++ .+..+++..+..|+.+++.||.|||.++.+|||||+.|||+. ..+.|||+|||.+-.+.....
T Consensus 91 ey~~gGsv~~lL~-~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 91 EYCGGGSVLDLLK-SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHhcCcchhhhhc-cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEecceeeeeechhh
Confidence 999 889999998 344568999999999999999999999999999999999996 559999999999987765433
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
...+++||+.|||||++.+..|+.|+||||||++.+||++|.+||..+.+..... +. .....+.+-
T Consensus 167 -------rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf----lI---pk~~PP~L~ 232 (467)
T KOG0201|consen 167 -------RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF----LI---PKSAPPRLD 232 (467)
T ss_pred -------ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE----ec---cCCCCCccc
Confidence 2268999999999999998899999999999999999999999998876622111 11 112222333
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCC
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGF 281 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~ 281 (473)
..+++.|++||..||++||+.||++.+| |.+-|++...
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~L---LKh~FIk~a~ 270 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKEL---LKHKFIKRAK 270 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHH---hhhHHHHhcC
Confidence 4788999999999999999999998877 5566666543
No 30
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.8e-41 Score=333.15 Aligned_cols=253 Identities=19% Similarity=0.221 Sum_probs=197.7
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
++|++.+.||+|+||.||+|++..+++.||||++... ....+.+|+.+++.++|++++. +..+.......++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVE-LKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccc-hhhhEecCCEEEEEE
Confidence 5799999999999999999999999999999985432 2345778999999998766555 444556777889999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||+.+++.+.+......+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||+++........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccCcccccccccc
Confidence 9997766666655556799999999999999999999999999999999999994 7789999999999876432211
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc---------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV--------- 232 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--------- 232 (473)
......||..|+|||++.+..++.++|||||||++|||++|+.||.+.........+..+.....
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 157 ------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred ------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 11245789999999999998999999999999999999999999987543222222211110000
Q ss_pred ---------------cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 233 ---------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 233 ---------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
..........++.++.+||.+||..||++||++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l 282 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 0000111234678899999999999999999988774
No 31
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.8e-42 Score=344.36 Aligned_cols=245 Identities=22% Similarity=0.324 Sum_probs=198.2
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.++||+|+||.||+|++..+++.||||++.+. ....+..|+.++..+.| ++|..+..+.......++|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS-EWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC-CCCccEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999985432 23457789999999985 4555555666778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++.....
T Consensus 80 ~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kL~Dfg~a~~~~~~- 154 (333)
T cd05600 80 MEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID---ASGHIKLTDFGLSKGIVTY- 154 (333)
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEEEeCcCCcccccc-
Confidence 9999 8899999974 45689999999999999999999999999999999999994 7789999999999865431
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc---cccH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV---STSI 236 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~---~~~~ 236 (473)
.....||..|+|||++.+..++.++|||||||+||||++|..||.+... .+.+..+..... ....
T Consensus 155 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~ 222 (333)
T cd05600 155 ---------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP---NETWENLKYWKETLQRPVY 222 (333)
T ss_pred ---------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH---HHHHHHHHhccccccCCCC
Confidence 2346799999999999999999999999999999999999999987443 222222221110 0100
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
......+++++.++|..||..+|++||++.+|.
T Consensus 223 ~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll 255 (333)
T cd05600 223 DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIK 255 (333)
T ss_pred CccccccCHHHHHHHHHHhhChhhhcCCHHHHH
Confidence 001125689999999999999999999977663
No 32
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=340.21 Aligned_cols=237 Identities=20% Similarity=0.292 Sum_probs=197.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.++|++.+.||+|+||.||+|++..+++.||||++.+. ....+..|+.+++.++|++++.. ..+....+..++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~-~~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNM-MCSFQDENRVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcE-EEEEEcCCEEEE
Confidence 47899999999999999999999999999999985432 23457889999999986655554 455567788999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
+|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||||+ .++.+||+|||+++.....
T Consensus 96 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 96 LLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD---NKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC---CCCCEEEeeccCceEcCCC
Confidence 99998 8899999874 45789999999999999999999999999999999999994 7789999999999866432
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
. ....||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+......
T Consensus 172 ~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~----- 233 (329)
T PTZ00263 172 T----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT---PFRIYEKILAGRLK----- 233 (329)
T ss_pred c----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC---HHHHHHHHhcCCcC-----
Confidence 2 23579999999999999999999999999999999999999997643 33444444433221
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~ 265 (473)
+...++.++.+||..||..||.+||+.
T Consensus 234 ~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 234 FPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 234578899999999999999999973
No 33
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3e-42 Score=354.34 Aligned_cols=204 Identities=25% Similarity=0.353 Sum_probs=176.7
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhc-----CCCCCCeeEEeeEeCCeE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQ-----GGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~-----~~~~i~~~~~~~~~~~~~ 77 (473)
+.-+|.|++.||+|+||.|.+|.+..|++.||||+++... ..+...|+.+|..|+ +..++..+..++....+.
T Consensus 184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 4458999999999999999999999999999999954443 566788999999998 234677778888899999
Q ss_pred EEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
|||+|++..+|.++++..+ ..|+...+..|+.||+.||.+||+.||||+||||+||||..- ....|||+|||.|+...
T Consensus 264 ciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~-~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 264 CIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDP-KRSRIKVIDFGSSCFES 342 (586)
T ss_pred eeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccC-CcCceeEEecccccccC
Confidence 9999999999999998653 459999999999999999999999999999999999999643 34489999999998654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT 219 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~ 219 (473)
... ..+.-+..|.|||+++|.+|+.+.||||||||+.||++|.+.|.|.+..+
T Consensus 343 q~v----------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D 395 (586)
T KOG0667|consen 343 QRV----------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD 395 (586)
T ss_pred Ccc----------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence 432 24577889999999999999999999999999999999999998765433
No 34
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.7e-41 Score=333.59 Aligned_cols=251 Identities=20% Similarity=0.244 Sum_probs=196.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.++|++.++||+|+||.||+|.+..+++.||||++.... ...+.+|+.+++.++|+++ ..+..+.......++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI-VLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCc-CeEEEEEecCCeEEEEE
Confidence 478999999999999999999999999999999854322 2346789999999986554 45555666778899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||++++|.+++......+++..+..++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+++.......
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~- 158 (303)
T cd07869 83 EYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---DTGELKLADFGLARAKSVPSH- 158 (303)
T ss_pred ECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECCCCcceeccCCCc-
Confidence 9999999999886666799999999999999999999999999999999999994 778999999999975432211
Q ss_pred cccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc--------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 232 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 232 (473)
......||..|+|||++.+. .++.++|||||||+||||++|..||.+... ....+..+.....
T Consensus 159 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD--IQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred ------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHHhCCCChhhcc
Confidence 11345789999999998764 589999999999999999999999987543 1222222211000
Q ss_pred -----------------cccHHHHh--cCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 233 -----------------STSIEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 233 -----------------~~~~~~l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
........ ..+++++.+|+..||+.||.+|||+.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l 286 (303)
T cd07869 231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAAL 286 (303)
T ss_pred chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHh
Confidence 00001111 12457889999999999999999977763
No 35
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.7e-41 Score=340.34 Aligned_cols=239 Identities=21% Similarity=0.260 Sum_probs=200.0
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+|++++.||+|+||.||+|.+..+++.||||++.+. ....+..|..++..+.+++++..+..+....+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999985432 23446788899999998888888888888888999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 81 EYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCEEEeecCcceecCCCCC
Confidence 999 8899988874 45689999999999999999999999999999999999994 678999999999875332211
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......||..|+|||++.+..++.++|||||||++|||++|+.||.+.. ....+..+..... .+.
T Consensus 157 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~---~~~~~~~i~~~~~-----~~~ 221 (324)
T cd05587 157 -------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDELFQSIMEHNV-----SYP 221 (324)
T ss_pred -------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCC-----CCC
Confidence 1134579999999999999999999999999999999999999997643 3334444433222 123
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~ 265 (473)
..++.++.+++..||..||.+|++.
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 4678999999999999999999986
No 36
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.7e-41 Score=335.05 Aligned_cols=235 Identities=22% Similarity=0.342 Sum_probs=195.4
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||+|+||.||+|.+..+++.||||++... ....+.+|+.+++.+.|++++ .+..+..+....+++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFII-RLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHh-hhHhhhccCCeEEEE
Confidence 4799999999999999999999999999999985432 223477899999999865554 445556677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++......
T Consensus 80 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 80 MEYVPGGELFSYLRN-SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEEecCcchhccCCc
Confidence 9998 7899999874 45799999999999999999999999999999999999994 67899999999998664321
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
....||+.|+|||++.+..++.++|||||||+||||++|..||.+.. ....+..+..... .+
T Consensus 156 ----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~-----~~ 217 (291)
T cd05612 156 ----------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN---PFGIYEKILAGKL-----EF 217 (291)
T ss_pred ----------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCc-----CC
Confidence 23579999999999999999999999999999999999999997743 3334444433322 12
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCC
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPD 264 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt 264 (473)
...++..+.++|.+||..||.+||+
T Consensus 218 ~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 218 PRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred CccCCHHHHHHHHHHcCCCHHHccC
Confidence 3456889999999999999999995
No 37
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.5e-41 Score=332.65 Aligned_cols=263 Identities=24% Similarity=0.439 Sum_probs=190.0
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcCC---CcEEEEEEcccCCchhHHHH------------HH---HHHHhcCCCCC
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLNVKTKHPQLQYE------------AK---LYKILQGGTGI 64 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAiK~~~~~~~~~l~~E------------~~---il~~L~~~~~i 64 (473)
...+++|++.++||+|+||.||+|.+..+ +..+|+|+...... .+..| +. .+..+.| .++
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~h-~~i 85 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE-TIVMETLVYNNIYDIDKIALWKNIHNIDH-LGI 85 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCC-chhhHHHHHHhhhhHHHHHHHHHhccCCC-CCC
Confidence 35678999999999999999999998777 67788887322221 11112 11 2222343 344
Q ss_pred CeeEEeeEeC----CeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC
Q 011988 65 PNLRWFGVEG----DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 65 ~~~~~~~~~~----~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 140 (473)
+.+..++... .+.+++++++..++.+++... ..+++..++.|+.||+.||+|||+++|+||||||+|||++ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~ 161 (294)
T PHA02882 86 PKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---G 161 (294)
T ss_pred CcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---C
Confidence 4444443332 255788999988998888743 3468889999999999999999999999999999999994 6
Q ss_pred CCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCH
Q 011988 141 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK 220 (473)
Q Consensus 141 ~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~ 220 (473)
.+.++|+|||+|+.+..................||+.|+|||++.+..++.++|||||||+||||++|+.||.+......
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 78899999999987754322111111122345799999999999999999999999999999999999999987643222
Q ss_pred HHHHHHHh-hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 221 KQKYEKIS-EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 221 ~~~~~~i~-~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
.....+.. ...... .......+|+++.+++..||..+|++||++.+|++.|
T Consensus 242 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 242 LIHAAKCDFIKRLHE-GKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHhHHHHHHHhhh-hhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11111100 000000 1112356789999999999999999999999999876
No 38
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3e-41 Score=352.49 Aligned_cols=254 Identities=20% Similarity=0.276 Sum_probs=196.3
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeE-------eCCeE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV-------EGDYN 77 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~-------~~~~~ 77 (473)
..++|++.++||+|+||.||+|.+..+++.||||.+... .....+|+.+++.++|++++..+..+.. ...+.
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 356899999999999999999999999999999986443 2345679999999998777766554432 12356
Q ss_pred EEEEecCCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 78 VLVIDLLGPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 78 ~lv~e~~g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
++||||++++|.+++.. ....+++..++.++.||+.||.|||++|||||||||+||||+ ...+.+||+|||+|+.
T Consensus 143 ~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~--~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 143 NVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID--PNTHTLKLCDFGSAKN 220 (440)
T ss_pred EEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc--CCCCceeeeccccchh
Confidence 79999999999888753 345699999999999999999999999999999999999995 2345799999999986
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc--
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-- 231 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~-- 231 (473)
+..... .....||+.|+|||++.+. .++.++|||||||+||||++|.+||.+.........+..+....
T Consensus 221 ~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 221 LLAGQR--------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred ccCCCC--------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 643221 1345789999999998875 58999999999999999999999998754322222221111000
Q ss_pred -------------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 -------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 -------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.......+....|+++.+||.+||..||.+||++.+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 00011122345688999999999999999999988773
No 39
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.5e-41 Score=335.48 Aligned_cols=260 Identities=18% Similarity=0.254 Sum_probs=197.1
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcC----------------CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ----------------TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGI 64 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~----------------~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i 64 (473)
..++|++.++||+|+||.||+|.+.. ++..||||++.... ...+.+|+.++..+.|+++
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni- 81 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI- 81 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe-
Confidence 45789999999999999999998532 34479999865432 2357889999999986554
Q ss_pred CeeEEeeEeCCeEEEEEecC-CCCHHHHHHHcC------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcc
Q 011988 65 PNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS------------------RKLSLKTVLMLADQMINRVEFVHSKSFLH 125 (473)
Q Consensus 65 ~~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvH 125 (473)
..+..+.......+++|||+ +++|.+++.... ..+++..++.|+.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 45555556667789999999 889999986421 23678899999999999999999999999
Q ss_pred cCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHH
Q 011988 126 RDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYF 205 (473)
Q Consensus 126 rDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~el 205 (473)
|||||+|||++ ..+.+||+|||+++.+..... +.......++..|+|||++.+..++.++|||||||++|||
T Consensus 162 ~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 233 (304)
T cd05096 162 RDLATRNCLVG---ENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI 233 (304)
T ss_pred cCcchhheEEc---CCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 99999999994 678999999999986543221 1112334567899999999988999999999999999999
Q ss_pred Hc--CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 206 LR--GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 206 lt--G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
++ +..||.+............................+|..+.++|.+||..||++||++.+|.+.|+
T Consensus 234 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 234 LMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 86 678887754322221111111111000011112457899999999999999999999999988875
No 40
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-42 Score=334.37 Aligned_cols=252 Identities=22% Similarity=0.297 Sum_probs=203.6
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeC----CeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG----DYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~----~~~~lv~e 82 (473)
=.|.-.+++|.|+||.||.|....+++.||||..-... .--.+|+++|+.+.|+|+|..++.|.... -+..+|||
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle 102 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE 102 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence 35888999999999999999999999999999732222 22357999999999888887777665432 24578999
Q ss_pred cCCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 83 LLGPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 83 ~~g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|+..+|.++++. .+..++...+.-++.||++||.|||+.||+||||||+|+|++ .+.+.+||||||.|+.+...+
T Consensus 103 ymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 103 YMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred hchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCcceeeccCC
Confidence 999999999984 366799999999999999999999999999999999999996 567999999999999887654
Q ss_pred CccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH--
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI-- 236 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-- 236 (473)
. ...+..|..|.|||.+.|.. |+.+.||||.|||+.||+.|++-|.|....+....+-++....-...+
T Consensus 181 p--------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 181 P--------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred C--------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 3 34568899999999999875 999999999999999999999999996554433333333221111111
Q ss_pred -------------------HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 237 -------------------EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 237 -------------------~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
..+....+++..+|+.++|.++|.+|.++.++.
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 113345689999999999999999999987763
No 41
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-41 Score=331.56 Aligned_cols=265 Identities=18% Similarity=0.282 Sum_probs=212.3
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.-.+.|++...||.|..++||+|+.+.+++.||||++.-+ ....+.+|+..++.+.|+|++ .++..+..+...|+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv-~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIV-TYHCSFVVDSELWV 101 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcc-eEEEEEEecceeEE
Confidence 3467899999999999999999999999999999984332 235688999999988855555 55556677788899
Q ss_pred EEecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 80 VIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
||.|+ +||+.++++.. ...|++..+..|++++++||.|||.+|.||||||+.|||| +.+|.|||+|||.+-.+.+
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFD 178 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeecc
Confidence 99999 99999999743 4459999999999999999999999999999999999999 5899999999999877766
Q ss_pred CCCccccccccCCCcccCccccccccccCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc--
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS-- 233 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-- 233 (473)
.... ..++. +.++||+.|||||++... .|+.|+||||||++..||++|..||..+.+. +..+.++......
T Consensus 179 ~G~R--~~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm--kvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 179 SGDR--QVTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM--KVLLLTLQNDPPTLL 253 (516)
T ss_pred cCce--eeEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH--HHHHHHhcCCCCCcc
Confidence 5422 22233 788999999999995533 4999999999999999999999999887542 3333444433321
Q ss_pred --ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 234 --TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 234 --~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
.....-.+.++..|.++|..||.+||.+||++++| |.+.|-+..
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskL---lkh~FFk~~ 299 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKL---LKHAFFKKA 299 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHH---hccHHHhhc
Confidence 11122235678899999999999999999998877 555555544
No 42
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-42 Score=330.21 Aligned_cols=262 Identities=20% Similarity=0.251 Sum_probs=209.2
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc-----CCchhHHHHHHHHHHhcCCCCCCeeEEeeE----eCC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGV----EGD 75 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~-----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~----~~~ 75 (473)
+..+|..++.||.|+||.|+.+.+..+|+.||||.+.. .......+|+++|+.++|.|+|.....+.. .-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 45677778999999999999999999999999997442 223456799999999998887777766654 345
Q ss_pred eEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 76 YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 76 ~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
..|+|+|+++.+|.++++ .++.++...+..++.||+.||.|+|+.+|+||||||.|+|+ +.+..+||||||+|+..
T Consensus 100 DvYiV~elMetDL~~iik-~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 100 DVYLVFELMETDLHQIIK-SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDFGLARYL 175 (359)
T ss_pred eeEEehhHHhhHHHHHHH-cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEeccccceeec
Confidence 679999999999999998 34459999999999999999999999999999999999999 47788999999999987
Q ss_pred cCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH--------
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK-------- 226 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~-------- 226 (473)
....... ..+.++-|..|.|||++.. ..|+...||||+||||.||++|+.-|.|.+.....+.+..
T Consensus 176 ~~~~~~~-----~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 176 DKFFEDG-----FMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred cccCccc-----chhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 6431111 1256788999999998875 4699999999999999999999999988553322222211
Q ss_pred ----Hh-----------hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 227 ----IS-----------EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 227 ----i~-----------~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
+. ......+...+.++.++...+|+++||.+||.+|+|+++. |.+.+..
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eA---L~hPYl~ 314 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEA---LAHPYLA 314 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHH---hcChhhh
Confidence 11 1122334455667788999999999999999999997765 6666543
No 43
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.3e-41 Score=356.23 Aligned_cols=259 Identities=18% Similarity=0.239 Sum_probs=193.6
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCC------CCCeeEEeeEeCCeE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGT------GIPNLRWFGVEGDYN 77 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~------~i~~~~~~~~~~~~~ 77 (473)
.++|+++++||+|+||.||+|.+..+++.||||++... .......|+.+++.+.+.+ ++..+.++.......
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 47899999999999999999999999999999986432 2334677888888887544 223334444455678
Q ss_pred EEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCC-------------CCc
Q 011988 78 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRR-------------ANQ 143 (473)
Q Consensus 78 ~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~-------------~~~ 143 (473)
|+||+++|++|.+++.. ...+++..++.|+.||+.||+|||+ .|||||||||+||||+.++. ...
T Consensus 208 ~iv~~~~g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~ 286 (467)
T PTZ00284 208 CIVMPKYGPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCR 286 (467)
T ss_pred EEEEeccCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCce
Confidence 99999999999998874 3579999999999999999999998 59999999999999963221 125
Q ss_pred EEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHH
Q 011988 144 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK 223 (473)
Q Consensus 144 vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~ 223 (473)
+||+|||++...... ....+||..|+|||++.+..++.++|||||||+||||++|+.||.+.........
T Consensus 287 vkl~DfG~~~~~~~~----------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 287 VRICDLGGCCDERHS----------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred EEECCCCccccCccc----------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 999999988643221 2356899999999999999999999999999999999999999987543222222
Q ss_pred HHHHhhcccc---------------------------ccHHHHhc-------CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 224 YEKISEKKVS---------------------------TSIEALCR-------GYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 224 ~~~i~~~~~~---------------------------~~~~~l~~-------~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
+.++...... ..+..+.. ...+.+.+||..||.+||++||+++++
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~- 435 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM- 435 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH-
Confidence 2221110000 00000000 013567899999999999999998877
Q ss_pred HHHHHHHHH
Q 011988 270 RLFRDLFIR 278 (473)
Q Consensus 270 ~~L~~l~~~ 278 (473)
|++.|..
T Consensus 436 --L~Hp~~~ 442 (467)
T PTZ00284 436 --TTHPYVL 442 (467)
T ss_pred --hcCcccc
Confidence 4555443
No 44
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.1e-41 Score=329.48 Aligned_cols=249 Identities=19% Similarity=0.255 Sum_probs=194.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcC-CCcEEEEEEcccC-----CchhHHHHHHHHHHhc--CCCCCCeeEEeeE-----e
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLNVKT-----KHPQLQYEAKLYKILQ--GGTGIPNLRWFGV-----E 73 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~-~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~--~~~~i~~~~~~~~-----~ 73 (473)
++|++.+.||+|+||.||+|++.. +++.||||++... ....+.+|+.+++.+. .|++|..+..++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999864 4688999984322 1234667888888774 2444444443332 3
Q ss_pred CCeEEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
....+++||+++++|.+++.... ..+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~---~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc---CCCCEEEccccce
Confidence 45689999999999999987543 4589999999999999999999999999999999999994 6789999999999
Q ss_pred ccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc--
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-- 230 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~-- 230 (473)
+...... ......||..|+|||++.+..++.++|||||||++|||++|..||.+.... ..+..+...
T Consensus 158 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~---~~~~~i~~~~~ 226 (290)
T cd07862 158 RIYSFQM--------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV---DQLGKILDVIG 226 (290)
T ss_pred EeccCCc--------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH---HHHHHHHHHhC
Confidence 8654321 123457899999999999989999999999999999999999999875432 222222211
Q ss_pred --------------------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 --------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 --------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
........+...+++.+.+++..||+.||++||++.+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 227 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred CCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 111123344456788999999999999999999988875
No 45
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.1e-41 Score=344.45 Aligned_cols=250 Identities=16% Similarity=0.180 Sum_probs=195.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLG 85 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g 85 (473)
.++|+++++||+|+||.||+|.+..+++.||||... ...+.+|+++++.|+|++++. +..++......+++||+++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---~~~~~~E~~il~~l~HpnIv~-~~~~~~~~~~~~lv~e~~~ 166 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---RGGTATEAHILRAINHPSIIQ-LKGTFTYNKFTCLILPRYK 166 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---hhhhHHHHHHHHhCCCCCCCC-EeEEEEECCeeEEEEecCC
Confidence 467999999999999999999999999999999743 335789999999999665555 5555567788899999999
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|..++.. ...+++.+++.|+.||+.||.|||++|||||||||+|||++ ..+.+||+|||+|+........
T Consensus 167 ~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~~~~~~~~---- 238 (391)
T PHA03212 167 TDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAACFPVDINAN---- 238 (391)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEEEeCCccccccccccc----
Confidence 999988874 45689999999999999999999999999999999999994 6788999999999754332111
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC----CHHHHHHHHhhcc----------
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG----TKKQKYEKISEKK---------- 231 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~----~~~~~~~~i~~~~---------- 231 (473)
......||+.|+|||++.+..++.++|||||||+||||++|..||...... .....+..+....
T Consensus 239 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 239 --KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred --ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 123468999999999999999999999999999999999999887542210 0011111111000
Q ss_pred --------------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 --------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 --------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
...........+|.++.+||.+||++||.+||++.+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL 374 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL 374 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHh
Confidence 00000011124577899999999999999999988874
No 46
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4e-41 Score=338.52 Aligned_cols=253 Identities=18% Similarity=0.253 Sum_probs=199.8
Q ss_pred ceEEEeeEeecCceEEEEEEEc---CCCcEEEEEEcccC-------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLNVKT-------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAiK~~~~~-------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
+|+++++||+|+||.||++++. .+++.||+|++.+. ....+..|+.+++.+.++++|..+..+.......
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999864 47899999985432 1234678999999998888888888888888899
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+++|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.+.
T Consensus 81 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCEEEeeCcCCcccc
Confidence 9999999 7899998864 45699999999999999999999999999999999999994 67899999999998654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHH-HHHHHHhhccccc
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVST 234 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~ 234 (473)
..... ......||..|+|||++.+.. ++.++|||||||+||||++|..||......... .....+....
T Consensus 157 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~--- 227 (332)
T cd05614 157 SEEKE------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD--- 227 (332)
T ss_pred ccCCC------ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC---
Confidence 33221 113457999999999998754 789999999999999999999999754332222 2222222211
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHH--HHHHHHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYA--YLKRLFRDL 275 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~--~l~~~L~~l 275 (473)
..+...+++.+.++|..||..||++||++. .+.+++++.
T Consensus 228 --~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 228 --PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred --CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 112345789999999999999999999544 344445443
No 47
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.1e-41 Score=339.55 Aligned_cols=236 Identities=20% Similarity=0.277 Sum_probs=191.3
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.+..+++.||||++.+. ....+..|+.+++.+.|++ |..+..++...+..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~-i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPF-LTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCC-CCCEEEEEEcCCEEEEEEeCCCC
Confidence 4799999999999999999999999985432 2234678999999998655 445555667778899999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||||+ .++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DfG~a~~~~~~~~----- 150 (323)
T cd05571 80 GELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeCCCCcccccCCC-----
Confidence 899888874 45799999999999999999999999999999999999994 778999999999975432211
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
......||+.|+|||++.+..++.++|||||||++|||++|..||.... ....+..+..... .+...+++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~---~~~~~~~~~~~~~-----~~p~~~~~ 220 (323)
T cd05571 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEKLFELILMEEI-----RFPRTLSP 220 (323)
T ss_pred --cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC---HHHHHHHHHcCCC-----CCCCCCCH
Confidence 1234679999999999999999999999999999999999999997632 2333333332221 23356789
Q ss_pred HHHHHHHHHhcCCCCCCC-----CHHHH
Q 011988 246 EFASYFHYCRSLRFDDKP-----DYAYL 268 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RP-----t~~~l 268 (473)
++.++|..||..||++|| ++.+|
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~l 248 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEI 248 (323)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHH
Confidence 999999999999999999 65555
No 48
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.1e-41 Score=336.10 Aligned_cols=239 Identities=21% Similarity=0.260 Sum_probs=199.4
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+|.+.+.||+|+||.||+|.+..+++.||||++.+.. ...+..|..++..+.+++++..+..+....+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5899999999999999999999999999999854422 2235667888888888899988888888889999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 81 EYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred cCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC---CCCcEEEccCCCceecCCCCC
Confidence 999 7899988874 35699999999999999999999999999999999999994 778999999999975432211
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ...+..+...... +.
T Consensus 157 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~~~~i~~~~~~-----~p 221 (323)
T cd05616 157 -------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQSIMEHNVA-----YP 221 (323)
T ss_pred -------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCC-----CC
Confidence 12346799999999999999999999999999999999999999987432 3344444433221 23
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~ 265 (473)
..++.++.+++..||..||++|++.
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 4678999999999999999999985
No 49
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.2e-41 Score=344.38 Aligned_cols=256 Identities=21% Similarity=0.335 Sum_probs=201.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCC-----CcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
++|++.+.||+|+||.||+|.+... ++.||||++.... ...+..|+.+++.+..|++|..+..++......
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 4699999999999999999986544 3579999865433 234778999999995566666666677777889
Q ss_pred EEEEecC-CCCHHHHHHHcC------------------------------------------------------------
Q 011988 78 VLVIDLL-GPSLEDLFNFCS------------------------------------------------------------ 96 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~------------------------------------------------------------ 96 (473)
+++|||+ +++|.+++....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 9999999 889999885321
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccc
Q 011988 97 ---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167 (473)
Q Consensus 97 ---------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~ 167 (473)
..+++..++.|+.||+.||.|||++||+||||||+|||++ +.+.+||+|||+++.+...... .
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~-----~ 269 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNY-----V 269 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcce-----e
Confidence 2478889999999999999999999999999999999995 6788999999999865433211 1
Q ss_pred cCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHH
Q 011988 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 246 (473)
Q Consensus 168 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 246 (473)
......++..|+|||++.+..++.++|||||||++|||++ |+.||....... .+.......... .....+|++
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~ 343 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS---KFYKMVKRGYQM---SRPDFAPPE 343 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH---HHHHHHHcccCc---cCCCCCCHH
Confidence 1123345678999999999899999999999999999997 999998754322 111221111111 112346899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 247 FASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 247 l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
+.++|..||+.||++||++.+|.++|++++
T Consensus 344 l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 344 IYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999999999999875
No 50
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-42 Score=343.99 Aligned_cols=249 Identities=21% Similarity=0.250 Sum_probs=216.0
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
.++|.+++++|.|+||.+++++++..+..||+|.+.-.. .....+|+.+++++.|+++|.+...|..++.+.+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 478999999999999999999999999999999843322 335789999999999988888888888888889999
Q ss_pred EecC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 81 IDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|+|| ||+|.+.++..+ ..|+++.++.|+.||+.||+|||+++|+|||||+.|||++ +++.|||.|||+|+.+...
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecchhhhhhcCCc
Confidence 9999 999999998665 5699999999999999999999999999999999999996 7778899999999988765
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.. ...+..||+.||+||++.+.+|+.|+|||||||++|||++-+.+|...+ ....+.+|..... ..
T Consensus 160 ~~-------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~---m~~Li~ki~~~~~----~P 225 (426)
T KOG0589|consen 160 DS-------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN---MSELILKINRGLY----SP 225 (426)
T ss_pred hh-------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc---hHHHHHHHhhccC----CC
Confidence 42 2356899999999999999999999999999999999999999998743 4445555555442 33
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRL 271 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~ 271 (473)
+...++.++..+|..||..+|+.||++.+|+..
T Consensus 226 lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 226 LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 456788999999999999999999999988654
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3e-41 Score=336.74 Aligned_cols=242 Identities=21% Similarity=0.290 Sum_probs=196.7
Q ss_pred EeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
||+|+||.||+|++..+++.||||++.+. ....+..|+.+++.++|++++. +..+.......++||||+ +++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVP-LKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEec-eeeEEecCCeEEEEEcCCCCCc
Confidence 69999999999999999999999985432 2234678999999998655555 555556778899999999 889
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccc
Q 011988 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167 (473)
Q Consensus 88 L~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~ 167 (473)
|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~------- 148 (312)
T cd05585 80 LFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDD------- 148 (312)
T ss_pred HHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCC-------
Confidence 9999874 4579999999999999999999999999999999999999 4778999999999975433221
Q ss_pred cCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHH
Q 011988 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 247 (473)
Q Consensus 168 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 247 (473)
......||..|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+..... .+...+++++
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~ 220 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN---VNEMYRKILQEPL-----RFPDGFDRDA 220 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC---HHHHHHHHHcCCC-----CCCCcCCHHH
Confidence 1234579999999999999999999999999999999999999997643 3333444433222 2335678999
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 248 ASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 248 ~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
.++|..||..||++||++..+.++|.+.|
T Consensus 221 ~~li~~~L~~dp~~R~~~~~~~e~l~hp~ 249 (312)
T cd05585 221 KDLLIGLLSRDPTRRLGYNGAQEIKNHPF 249 (312)
T ss_pred HHHHHHHcCCCHHHcCCCCCHHHHHcCCC
Confidence 99999999999999998766777777654
No 52
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-40 Score=338.58 Aligned_cols=252 Identities=21% Similarity=0.241 Sum_probs=194.6
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeC----
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEG---- 74 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~---- 74 (473)
.+.++|++.+.||+|+||.||+|.+..+++.||||++... ....+.+|+.+++.++|++++..+..+....
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3568999999999999999999999999999999986432 2345678999999999777776665554322
Q ss_pred -CeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 75 -DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 75 -~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
...+++|||++++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~---~~~~~kl~Dfg~a~ 171 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLAR 171 (359)
T ss_pred cceeEEEEeCCCcCHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEecCCCcc
Confidence 3579999999988888774 3589999999999999999999999999999999999994 77899999999997
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc-
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV- 232 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~- 232 (473)
....... .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+.........+........
T Consensus 172 ~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 243 (359)
T cd07876 172 TACTNFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243 (359)
T ss_pred ccccCcc--------CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcH
Confidence 5433211 1345789999999999999999999999999999999999999987543211111110000000
Q ss_pred ---------------------cccHHHH------------hcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 233 ---------------------STSIEAL------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 233 ---------------------~~~~~~l------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
......+ ....++++.+||.+||..||++||++.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 313 (359)
T cd07876 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEAL 313 (359)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHh
Confidence 0000000 112357889999999999999999988773
No 53
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-42 Score=347.58 Aligned_cols=256 Identities=21% Similarity=0.326 Sum_probs=205.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
.+...+...||+|.||+||+|++- | .||||++.... .+.|.+|+.+|++-+|.|++.++.+ +....+ .||
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~-~~~p~~-AIi 465 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGA-CMNPPL-AII 465 (678)
T ss_pred HHHhhccceeccccccceeecccc--c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehh-hcCCce-eee
Confidence 456778999999999999999974 3 58999854433 3458899999999997766655544 444444 888
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
..+| |.+|+.++.-...+|+..+.+.|+.||++|+.|||.++|||||||..||++ .+++.|||+|||++..-..-.
T Consensus 466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~w~ 542 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKTRWS 542 (678)
T ss_pred ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeeeeec
Confidence 8899 779999998777789999999999999999999999999999999999999 466999999999997533221
Q ss_pred CccccccccCCCcccCccccccccccCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
..+. .....|...|||||+++.+ +|++.+||||||||+|||++|.+||... ...+.+..+.........
T Consensus 543 g~~q-----~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~---~~dqIifmVGrG~l~pd~ 614 (678)
T KOG0193|consen 543 GEQQ-----LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ---NRDQIIFMVGRGYLMPDL 614 (678)
T ss_pred cccc-----cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC---ChhheEEEecccccCccc
Confidence 1111 1334688899999999854 5899999999999999999999999842 233444444444444555
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
......+|.++++|+..||.+++++||.+.+|+..|++++.
T Consensus 615 s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 615 SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 66677899999999999999999999999999998888764
No 54
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.9e-40 Score=321.58 Aligned_cols=253 Identities=14% Similarity=0.220 Sum_probs=201.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEc---CCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
.++|++.+.||+|+||.||+|.+. ..+..||+|+..... ...+..|+.+++.++|+ ++..+..+...+...+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~-~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHS-NIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCC-CcCeEEEEEecCCCcE
Confidence 457999999999999999999865 346789999855432 23477899999999755 4555566667778899
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+||||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++ .++.++|+|||.+.....
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---SDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---CCCcEEECCCcccccccc
Confidence 999999 6799999886566799999999999999999999999999999999999994 678999999998765422
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
... .......++..|+|||.+.+..++.++|||||||++||+++ |..||.+... ...+..+......
T Consensus 160 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~---~~~~~~~~~~~~~--- 227 (266)
T cd05064 160 EAI------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG---QDVIKAVEDGFRL--- 227 (266)
T ss_pred cch------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHHCCCCC---
Confidence 111 01122345678999999999999999999999999999775 9999987543 2223333322211
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
.....+|..+.+++.+||+.+|++||++.+|.+.|..+
T Consensus 228 -~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 -PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 12356889999999999999999999999999988765
No 55
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-41 Score=353.06 Aligned_cols=261 Identities=19% Similarity=0.262 Sum_probs=201.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEE-eeE-----e-CCe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRW-FGV-----E-GDY 76 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~-~~~-----~-~~~ 76 (473)
.+++|.+.|.+|||+.||+|.+...|..||+|.+...+ ...+.+|+.+|+.|++|++|+.+.. ... . .-.
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 45889999999999999999998888999999843333 3457899999999998887776654 211 1 234
Q ss_pred EEEEEecC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 77 NVLVIDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~-~~~~ls~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
++|.|||| |++|-|+++. ....|++.++++|+.|+++|+.+||... |||||||-+||||+ .++.+||||||.|
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls---~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS---ADGNYKLCDFGSA 193 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc---CCCCEEeCccccc
Confidence 68899999 5899999973 3445999999999999999999999988 99999999999995 7889999999999
Q ss_pred ccccCCC-Ccccccc-ccCCCcccCcccccccccc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH
Q 011988 153 KRYRDTA-THQHIPY-RENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 153 ~~~~~~~-~~~~~p~-~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i 227 (473)
....... ....+.+ .......-|+.|+|||++. |...+.|+|||+|||+||.||....||.+-.. ..|
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------laI 266 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------LAI 266 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------eeE
Confidence 7543222 1111111 1112235689999999874 77899999999999999999999999987421 122
Q ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 228 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
...++..+. ...++..|.+||..||+.||++||++.++...+..+..+..
T Consensus 267 lng~Y~~P~---~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 267 LNGNYSFPP---FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred EeccccCCC---CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 222222211 14678999999999999999999998888777777665443
No 56
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.9e-40 Score=332.76 Aligned_cols=237 Identities=22% Similarity=0.274 Sum_probs=191.3
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhc--CCCCCCeeEEeeEeCCeEEEE
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~--~~~~i~~~~~~~~~~~~~~lv 80 (473)
|++.+.||+|+||.||+|.+..+++.||||++.+. ....+..|++++..+. .|++|..+..+.......++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78999999999999999999999999999985432 2234667777765443 255666666677788899999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|..++. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD---TEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCcEEeCcccCCccCCCCC
Confidence 9999 789988775 45799999999999999999999999999999999999994 77899999999987543221
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. ......||..|+|||++.+..++.++|||||||++|||++|+.||.+.. ..+.+..+...... +
T Consensus 156 ~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~---~~~~~~~i~~~~~~-----~ 220 (324)
T cd05589 156 D-------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD---EEEVFDSIVNDEVR-----Y 220 (324)
T ss_pred C-------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCCC-----C
Confidence 1 1235679999999999999999999999999999999999999997643 23333333332221 2
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCH
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~ 265 (473)
...++.++.++|.+||..||.+||+.
T Consensus 221 p~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 221 PRFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 34678999999999999999999954
No 57
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.2e-40 Score=328.53 Aligned_cols=253 Identities=19% Similarity=0.240 Sum_probs=198.7
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.++|.+.++||+|+||.||+|++..+++.||||.+... ....+.+|+.+++.++|++++ .+..+.......++||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcc-eEEEEEeeCCeEEEEE
Confidence 36799999999999999999999999999999985432 223567899999999865554 5555666778899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||+.++|.+++......+++..+..++.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++.......
T Consensus 84 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~- 159 (309)
T cd07872 84 EYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSVPTK- 159 (309)
T ss_pred eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECccccceecCCCcc-
Confidence 9999999999886666789999999999999999999999999999999999994 678999999999976433221
Q ss_pred cccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc--------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 232 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 232 (473)
......+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+........
T Consensus 160 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 160 ------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred ------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 1123467899999999876 4589999999999999999999999987544332222222111100
Q ss_pred --------------cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 233 --------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 233 --------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
..........+++++.++|..||..||.+|||+.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 284 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAM 284 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHh
Confidence 0011112245688999999999999999999987774
No 58
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.1e-40 Score=332.40 Aligned_cols=240 Identities=20% Similarity=0.263 Sum_probs=200.1
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+|.+.+.||+|+||.||+|.+..+++.||||++.+. ....+..|..++..+.+++++..+..+....+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 488999999999999999999999999999985432 12346678889998988999988888888888999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|.+++.. ...+++.+++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 81 EYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeccccccccCCCCc
Confidence 999 8899998874 45699999999999999999999999999999999999994 778999999999975432221
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......||..|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+...... +.
T Consensus 157 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~---~~~~~~~i~~~~~~-----~p 221 (323)
T cd05615 157 -------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED---EDELFQSIMEHNVS-----YP 221 (323)
T ss_pred -------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCCC-----CC
Confidence 1234579999999999999899999999999999999999999998743 23344444433221 23
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYA 266 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~ 266 (473)
..++.++.+++..||..+|.+|++..
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 46789999999999999999999853
No 59
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.1e-40 Score=332.17 Aligned_cols=254 Identities=19% Similarity=0.276 Sum_probs=200.1
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
..++|++.+.||+|+||.||++++..++..||+|+..... ...+.+|+++++.++|++++. +..+.......++|
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv 81 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG-FYGAFYSDGEISIC 81 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCe-EEEEEEECCEEEEE
Confidence 3578999999999999999999999999999999854432 245889999999998655554 54555667788999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|||+ +++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||++..+...
T Consensus 82 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 82 MEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred eecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEEEccCccccccccc
Confidence 9999 7899999974 34689999999999999999999986 699999999999994 6788999999999765432
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-------
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------- 231 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~------- 231 (473)
. .....||..|+|||++.+..++.++|||||||+||||++|+.||....... +..+....
T Consensus 158 ~---------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~ 224 (331)
T cd06649 158 M---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE----LEAIFGRPVVDGEEG 224 (331)
T ss_pred c---------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHhcccccccccC
Confidence 2 134579999999999999999999999999999999999999996533211 11110000
Q ss_pred ------------------------------------ccccHHHH-hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 232 ------------------------------------VSTSIEAL-CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 232 ------------------------------------~~~~~~~l-~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
........ ...+++++.+||.+||.+||++||++.+| |++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~el---l~h 301 (331)
T cd06649 225 EPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML---MNH 301 (331)
T ss_pred CccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHH---hcC
Confidence 00000000 11367899999999999999999998877 556
Q ss_pred HHHHh
Q 011988 275 LFIRE 279 (473)
Q Consensus 275 l~~~~ 279 (473)
.|.+.
T Consensus 302 ~~~~~ 306 (331)
T cd06649 302 TFIKR 306 (331)
T ss_pred hHHhh
Confidence 66554
No 60
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.5e-40 Score=330.84 Aligned_cols=235 Identities=22% Similarity=0.273 Sum_probs=191.4
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.+..+++.||||++... ....+..|..++..+.+|++|..+..+.......++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999999999999999985432 22335567777777666777777777777888999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~a~~~~~~~~----- 151 (316)
T cd05592 81 GDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADFGMCKENMNGEG----- 151 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC---CCCCEEEccCcCCeECCCCCC-----
Confidence 899998874 44799999999999999999999999999999999999994 778999999999976433221
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
......||..|+|||++.+..++.++|||||||++|||++|..||.+... .+.+..+..... .+...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---~~~~~~i~~~~~-----~~~~~~~~ 221 (316)
T cd05592 152 --KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---DELFDSILNDRP-----HFPRWISK 221 (316)
T ss_pred --ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCC-----CCCCCCCH
Confidence 12346799999999999999999999999999999999999999987543 333333332211 12345789
Q ss_pred HHHHHHHHHhcCCCCCCCCHH
Q 011988 246 EFASYFHYCRSLRFDDKPDYA 266 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~~ 266 (473)
++.++|..||..||++||++.
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred HHHHHHHHHccCCHHHcCCCh
Confidence 999999999999999999864
No 61
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.7e-41 Score=339.98 Aligned_cols=254 Identities=23% Similarity=0.310 Sum_probs=200.2
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|.+.+.||+|+||.||+|++..+++.||||++.+. ....+..|+.++..+.|.+ |..+..+..++...++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPW-IVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCC-ccchhhheecCCeEEEE
Confidence 5799999999999999999999999999999985432 2345778999999998544 44555566778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++... ..+++..++.++.||+.||+|||++||+||||||+||||+ .++.+||+|||+++.+....
T Consensus 80 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 80 MEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred EcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEeecCCCCccCcccC
Confidence 9999 88999999754 5799999999999999999999999999999999999994 77899999999998765433
Q ss_pred Ccc----------------------ccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Q 011988 160 THQ----------------------HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 217 (473)
Q Consensus 160 ~~~----------------------~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~ 217 (473)
... ...........||..|+|||++.+..++.++|||||||+||||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 000 0000112345799999999999999999999999999999999999999987542
Q ss_pred CCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCC-HHHHHH
Q 011988 218 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD-YAYLKR 270 (473)
Q Consensus 218 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt-~~~l~~ 270 (473)
...+.++.........+ ....+++++.++|..||. ||.+||+ ++++++
T Consensus 236 ---~~~~~~i~~~~~~~~~p-~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 236 ---QETYNKIINWKESLRFP-PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred ---HHHHHHHhccCCcccCC-CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 33333333311111111 112368999999999997 9999999 888743
No 62
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.6e-41 Score=335.81 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=197.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|.+.+.||+|+||.||+|.+..+++.||||++... ....+..|+.+++.+.| ++|..+..+.......++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~-~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS-PWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceeeEEecCCeEEEE
Confidence 5799999999999999999999999999999985432 22346788888888774 5555565666777889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||++ ..+.+||+|||++..+....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~---~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID---RTGHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC---CCCCEEeccCCCCeECCCCC
Confidence 9999 8899999987667899999999999999999999999999999999999994 78899999999998765432
Q ss_pred CccccccccCCCcccCcccccccccc------CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHL------GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 233 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~------~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 233 (473)
.. ......||..|+|||++. +..++.++|||||||+||||++|..||..... ...+..+......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~~~~~~i~~~~~~ 227 (330)
T cd05601 157 MV------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS---AKTYNNIMNFQRF 227 (330)
T ss_pred ce------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH---HHHHHHHHcCCCc
Confidence 21 112347899999999987 45678999999999999999999999976432 2333333322111
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
...+ ....++.++.+||..||. +|.+||+++++
T Consensus 228 ~~~~-~~~~~~~~~~~li~~ll~-~p~~R~t~~~l 260 (330)
T cd05601 228 LKFP-EDPKVSSDFLDLIQSLLC-GQKERLGYEGL 260 (330)
T ss_pred cCCC-CCCCCCHHHHHHHHHHcc-ChhhCCCHHHH
Confidence 1000 112468999999999997 99999998766
No 63
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.4e-40 Score=340.52 Aligned_cols=255 Identities=21% Similarity=0.317 Sum_probs=200.8
Q ss_pred CceEEEeeEeecCceEEEEEEE-----cCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTN-----IQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~-----~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
++|++.++||+|+||.||+|++ ..++..||||++.... ...+.+|+.++..+.+|++|..+..++......
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4799999999999999999974 3456789999864332 235778999999996677777777777888889
Q ss_pred EEEEecC-CCCHHHHHHHcC------------------------------------------------------------
Q 011988 78 VLVIDLL-GPSLEDLFNFCS------------------------------------------------------------ 96 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~------------------------------------------------------------ 96 (473)
++||||+ +++|.+++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 9999999 889999886422
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 97 --------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 97 --------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
..+++..++.|+.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~~- 270 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSNY- 270 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCcccc-
Confidence 1478889999999999999999999999999999999995 6778999999999866443211
Q ss_pred ccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
.......++..|+|||++.+..++.++|||||||+||||++ |..||....... .....+... ... ....
T Consensus 271 ----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~-~~~---~~~~ 340 (375)
T cd05104 271 ----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMIKEG-YRM---LSPE 340 (375)
T ss_pred ----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHHHhC-ccC---CCCC
Confidence 11123345678999999999999999999999999999998 999997754322 112222211 111 1123
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
..|.++.+||..||+.||++||++.+|.+.|++.
T Consensus 341 ~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 341 CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 4678999999999999999999999999988864
No 64
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.5e-40 Score=323.26 Aligned_cols=251 Identities=19% Similarity=0.234 Sum_probs=194.3
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhc--CCCCCCeeEEeeE-----eCC
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQ--GGTGIPNLRWFGV-----EGD 75 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~--~~~~i~~~~~~~~-----~~~ 75 (473)
+|++.+.||+|+||.||+|.+..+++.||||.+.... ...+..|+.+++.+. .|++|..+..++. ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5999999999999999999999999999999854321 234667888888774 2444444433332 234
Q ss_pred eEEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 76 YNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 76 ~~~lv~e~~g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
..+++||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccCcccc
Confidence 579999999989999987543 3589999999999999999999999999999999999994 778999999999986
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc----
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK---- 230 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~---- 230 (473)
+..... .....||..|+|||++.+..++.++|||||||++|||++|..||.+.........+......
T Consensus 158 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07863 158 YSCQMA--------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 229 (288)
T ss_pred ccCccc--------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChh
Confidence 643221 12357899999999999989999999999999999999999999765432222222211100
Q ss_pred ---------------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 ---------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 ---------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
........+...++.++.++|.+||+.||++||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 001122334456788999999999999999999988775
No 65
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.3e-40 Score=333.55 Aligned_cols=270 Identities=18% Similarity=0.264 Sum_probs=205.4
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
..++|++.++||.|+||.||+|.+..++..||+|++.... ...+.+|+++++.++|++ |..+..++...+..++|
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY-IVGFYGAFYSDGEISIC 81 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCc-ccceeEEEEECCEEEEE
Confidence 4678999999999999999999999999999999854332 245789999999998655 44555566677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|||+ +++|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++ ..+.+||+|||++..+...
T Consensus 82 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 82 MEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCEEEeeCCcchhhhhh
Confidence 9999 8899999974 34689999999999999999999985 799999999999994 6788999999999765432
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH-------------
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE------------- 225 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~------------- 225 (473)
.. ....||..|+|||++.+..++.++|||||||++|||++|+.||...........+.
T Consensus 158 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (333)
T cd06650 158 MA---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETS 228 (333)
T ss_pred cc---------ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccC
Confidence 21 34578999999999999889999999999999999999999997543211110000
Q ss_pred ------------------------HHhhccccccHHHHh-cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 226 ------------------------KISEKKVSTSIEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 226 ------------------------~i~~~~~~~~~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
.+...........+. ..++.++.+||.+||.+||++||++.+| |.+.|.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~el---l~h~~~~~~ 305 (333)
T cd06650 229 PRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQL---MVHAFIKRS 305 (333)
T ss_pred cccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHH---hhCHHHhcC
Confidence 000000000000011 1357889999999999999999998877 455555544
Q ss_pred -CCCCCcccccc
Q 011988 281 -FQFDYVFDWTI 291 (473)
Q Consensus 281 -~~~~~~~dw~~ 291 (473)
....+.+.|..
T Consensus 306 ~~~~~~~~~~~~ 317 (333)
T cd06650 306 EAEEVDFAGWLC 317 (333)
T ss_pred ccccccHHHHHH
Confidence 33345566753
No 66
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-41 Score=344.15 Aligned_cols=250 Identities=22% Similarity=0.331 Sum_probs=205.3
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCCH
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSL 88 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL 88 (473)
-+||+|.||+||-|+|..+...+|||-+.... ...+..|+.+.+.|.|.|+|.++..+... .++-|+||-. ||+|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen-Gf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN-GFFKIFMEQVPGGSL 659 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC-CeEEEEeecCCCCcH
Confidence 36899999999999999999999999854433 33488999999999988887777665544 4666777766 9999
Q ss_pred HHHHHHcCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccccc
Q 011988 89 EDLFNFCSRKL--SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166 (473)
Q Consensus 89 ~~~l~~~~~~l--s~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~ 166 (473)
.+++...-+++ .+.++-.+..||++||.|||++.|||||||-+||||. .-.|.+||.|||.++.+..-..
T Consensus 660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP------ 731 (1226)
T KOG4279|consen 660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINP------ 731 (1226)
T ss_pred HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCc------
Confidence 99999777777 8899999999999999999999999999999999996 5678999999999987654322
Q ss_pred ccCCCcccCccccccccccCCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCc
Q 011988 167 RENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 244 (473)
Q Consensus 167 ~~~~~~~Gt~~Y~APE~~~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 244 (473)
...++.||..|||||++..++ |+.++|||||||++.||.||++||..+... ...+.++..-+..++++ ..++
T Consensus 732 -~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp--qAAMFkVGmyKvHP~iP---eels 805 (1226)
T KOG4279|consen 732 -CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP--QAAMFKVGMYKVHPPIP---EELS 805 (1226)
T ss_pred -cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh--hHhhhhhcceecCCCCc---HHHH
Confidence 236789999999999998765 899999999999999999999999876543 33344555545555443 3456
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 245 TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 245 ~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
.+.+.||.+|+..||.+||++.+| |.+.|.+.+
T Consensus 806 aeak~FilrcFepd~~~R~sA~~L---L~DpFlq~~ 838 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDL---LQDPFLQHN 838 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHh---ccCcccccC
Confidence 889999999999999999998776 666665544
No 67
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=334.59 Aligned_cols=253 Identities=20% Similarity=0.279 Sum_probs=199.4
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----------------chhHHHHHHHHHHhcCCCCCCe
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----------------HPQLQYEAKLYKILQGGTGIPN 66 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----------------~~~l~~E~~il~~L~~~~~i~~ 66 (473)
...|+|++++.||+|.||.|-+|++..+++.||||++.+.. .+...+|+.||++|.|.++|..
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 45789999999999999999999999999999999865532 1357899999999998665555
Q ss_pred eEEeeE-eCCeEEEEEecC-CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCc
Q 011988 67 LRWFGV-EGDYNVLVIDLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 143 (473)
Q Consensus 67 ~~~~~~-~~~~~~lv~e~~-g~sL~~~l~~~~~~-ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~ 143 (473)
+..... ..+..|||+||| .|.+... . +... +++.+++.|+.+++.||+|||.+|||||||||+|+||+ ..++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~-p-~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~---~~g~ 248 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC-P-PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS---SDGT 248 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC-C-CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc---CCCc
Confidence 554433 557789999999 3333221 1 2334 89999999999999999999999999999999999995 7799
Q ss_pred EEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 011988 144 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGT 219 (473)
Q Consensus 144 vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~ 219 (473)
|||+|||.+..+........ ........||+.|+|||+..++. .+.+.||||+||+||.|+.|+.||.+ ..
T Consensus 249 VKIsDFGVs~~~~~~~~~~~--d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~---~~ 323 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGS--DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD---DF 323 (576)
T ss_pred EEeeccceeeecccCCcccc--HHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc---ch
Confidence 99999999987633211110 01123368999999999988743 36889999999999999999999977 34
Q ss_pred HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 220 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
..+.+.+|....+..+.. ..+.+.+++||.+||.+||+.|.+..+|+
T Consensus 324 ~~~l~~KIvn~pL~fP~~---pe~~e~~kDli~~lL~KdP~~Ri~l~~ik 370 (576)
T KOG0585|consen 324 ELELFDKIVNDPLEFPEN---PEINEDLKDLIKRLLEKDPEQRITLPDIK 370 (576)
T ss_pred HHHHHHHHhcCcccCCCc---ccccHHHHHHHHHHhhcChhheeehhhhe
Confidence 566777777665543322 24568999999999999999999976664
No 68
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3e-40 Score=330.24 Aligned_cols=235 Identities=21% Similarity=0.265 Sum_probs=190.9
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|++..+++.||||++.+. ....+..|..++..+.++++|..+..+....+..++||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4799999999999999999999999985432 23346678888877766777777777778888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~----- 151 (316)
T cd05620 81 GDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFGDN----- 151 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCccCCCeecccCCC-----
Confidence 899988874 45699999999999999999999999999999999999994 678999999999874322111
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
......||..|+|||++.+..++.++|||||||++|||++|..||.+... .+.+..+.... ..+...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~---~~~~~~~~~~~-----~~~~~~~~~ 221 (316)
T cd05620 152 --RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---DELFESIRVDT-----PHYPRWITK 221 (316)
T ss_pred --ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCC-----CCCCCCCCH
Confidence 12346799999999999999999999999999999999999999976432 23333332211 112345788
Q ss_pred HHHHHHHHHhcCCCCCCCCHH
Q 011988 246 EFASYFHYCRSLRFDDKPDYA 266 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~~ 266 (473)
++.++|..||..||++||++.
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~ 242 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVV 242 (316)
T ss_pred HHHHHHHHHccCCHHHcCCCh
Confidence 999999999999999999963
No 69
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.4e-40 Score=337.34 Aligned_cols=267 Identities=19% Similarity=0.290 Sum_probs=201.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++++.||+|+||+||+|.+..+++.||||++.+. ....+..|+.++..++|.+ |..+.....+....++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~-iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW-VVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCC-cceEEEEEecCCeEEEE
Confidence 5799999999999999999999999999999986442 2235678999999998554 55555566677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ |++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||||+ .++.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 80 MEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred EcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCCEEEeeccCcccccccc
Confidence 9999 8899999874 45799999999999999999999999999999999999994 67899999999998654321
Q ss_pred Ccc-------cc---------------------ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCC
Q 011988 160 THQ-------HI---------------------PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211 (473)
Q Consensus 160 ~~~-------~~---------------------p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~P 211 (473)
... .. ........+||+.|+|||++.+..++.++|||||||+||||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 100 00 00001245799999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCccc
Q 011988 212 WQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFD---DKPDYAYLKRLFRDLFIREGFQFDYVFD 288 (473)
Q Consensus 212 f~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~---~RPt~~~l~~~L~~l~~~~~~~~~~~~d 288 (473)
|.+.. ....+.++.........+. ...+++++.++|..++. +|+ .||++++|+ ++ ++-...+
T Consensus 236 f~~~~---~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~---~h-------p~f~~~~ 300 (363)
T cd05628 236 FCSET---PQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIK---TN-------PFFEGVD 300 (363)
T ss_pred CCCCC---HHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh---CC-------CCCCCCC
Confidence 98743 3344444433211111111 12357899999998664 444 457866663 33 3444567
Q ss_pred ccccc
Q 011988 289 WTILK 293 (473)
Q Consensus 289 w~~~~ 293 (473)
|....
T Consensus 301 ~~~~~ 305 (363)
T cd05628 301 WEHIR 305 (363)
T ss_pred HHHHH
Confidence 87654
No 70
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.8e-40 Score=351.11 Aligned_cols=252 Identities=22% Similarity=0.252 Sum_probs=200.7
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC----
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG---- 74 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~---- 74 (473)
...++|.+.+.||+|+||.||+|.+..+++.||||++.... ...+..|+.++..+.|.+++.....+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 45689999999999999999999999999999999854432 234667888888888766665544332211
Q ss_pred ---CeEEEEEecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEE
Q 011988 75 ---DYNVLVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII 147 (473)
Q Consensus 75 ---~~~~lv~e~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~ 147 (473)
...++||||+ +++|.+++... ...+++..+..|+.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCCCEEEE
Confidence 1467999999 88999998643 34689999999999999999999999999999999999995 67899999
Q ss_pred ecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH
Q 011988 148 DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 148 DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i 227 (473)
|||+++.+....... ......||+.|+|||++.+..++.++|||||||+||||++|+.||.+.. ....+..+
T Consensus 186 DFGls~~~~~~~~~~-----~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~---~~~~~~~~ 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDD-----VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN---MEEVMHKT 257 (496)
T ss_pred ecccCeecccccccc-----ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHH
Confidence 999998765432111 1235679999999999999999999999999999999999999997643 23333333
Q ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 228 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..... ..+...+++++.+++..||+.||++||++.++++
T Consensus 258 ~~~~~----~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 258 LAGRY----DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred hcCCC----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 32222 1234578899999999999999999999998864
No 71
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=336.71 Aligned_cols=253 Identities=25% Similarity=0.342 Sum_probs=216.0
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc------hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~------~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
.+...|++.+.||.|.||.||+|+.+.+|+.+|+|++.+... ..+.+|+.+|+.|.+|++|..+..........
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 356789999999999999999999999999999999655443 47899999999999888888888888888899
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC-CCcEEEEecCCcccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLAKRY 155 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-~~~vkL~DFGla~~~ 155 (473)
++|||+| |+.|.+.+... .+++..+..++.||+.++.|||+.||+||||||+|||+...+. .+.+|++|||+|..+
T Consensus 112 ~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 9999999 89999998755 3999999999999999999999999999999999999975443 458999999999987
Q ss_pred cCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
.... .....+||+.|+|||++.+..|+..+||||+||++|.|++|..||.+... .....++...... .
T Consensus 190 ~~~~--------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~---~~~~~~i~~~~~~-f 257 (382)
T KOG0032|consen 190 KPGE--------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETE---FEIFLAILRGDFD-F 257 (382)
T ss_pred cCCc--------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCCh---hHHHHHHHcCCCC-C
Confidence 6621 12467999999999999999999999999999999999999999988543 3334455554442 2
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
....+..++..+.++|..|+..||..|+++.++++
T Consensus 258 ~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 258 TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 22334677899999999999999999999888754
No 72
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.6e-40 Score=333.22 Aligned_cols=231 Identities=20% Similarity=0.293 Sum_probs=187.3
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||++.+..+|+.||+|++... ....+..|+.+++.+.|++ |..+..++...+..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~-i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF-LTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCC-CcceeeEEecCCEEEEEEeCCCC
Confidence 4799999999999999999999999985432 2234667999999998655 445555566778899999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~~----- 150 (323)
T cd05595 80 GELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc---CCCCEEecccHHhccccCCCC-----
Confidence 899888864 45799999999999999999999999999999999999994 778999999999875432221
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
......||..|+|||++.+..++.++|||||||+||||++|+.||..... ...+..+..... .+...+++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---~~~~~~~~~~~~-----~~p~~~~~ 220 (323)
T cd05595 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEI-----RFPRTLSP 220 (323)
T ss_pred --ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCC-----CCCCCCCH
Confidence 11345799999999999999999999999999999999999999976432 233333322222 12356789
Q ss_pred HHHHHHHHHhcCCCCCCC
Q 011988 246 EFASYFHYCRSLRFDDKP 263 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RP 263 (473)
++.++|..||..||++||
T Consensus 221 ~~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 221 EAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred HHHHHHHHHccCCHHHhC
Confidence 999999999999999998
No 73
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=333.84 Aligned_cols=241 Identities=22% Similarity=0.308 Sum_probs=196.4
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCC-cEEEEEEccc------CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKLNVK------TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~-~~vAiK~~~~------~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
..++|.+.+.||+|+||.||+|.+..++ ..||||++.+ .....+..|+.+++.+.|++++ .+..+.......
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv-~~~~~~~~~~~~ 106 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCV-NLYGSFKDESYL 106 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCc-ceEEEEEeCCEE
Confidence 3467999999999999999999876654 6899998532 2234577899999999865555 555566777889
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
++||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 107 ~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD---KDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEEEecCCCCeecC
Confidence 9999999 8899999874 45699999999999999999999999999999999999994 78899999999998654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
... ....||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ....+..+.....
T Consensus 183 ~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~---~~~~~~~i~~~~~---- 245 (340)
T PTZ00426 183 TRT----------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE---PLLIYQKILEGII---- 245 (340)
T ss_pred CCc----------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC---HHHHHHHHhcCCC----
Confidence 321 24579999999999999889999999999999999999999998643 2333444433322
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCC-----CHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKP-----DYAYL 268 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RP-----t~~~l 268 (473)
.+...+++++.++|.+||+.||++|+ ++++|
T Consensus 246 -~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~ 281 (340)
T PTZ00426 246 -YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNV 281 (340)
T ss_pred -CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHH
Confidence 12345788999999999999999996 65554
No 74
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.8e-40 Score=332.48 Aligned_cols=233 Identities=21% Similarity=0.251 Sum_probs=192.1
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|++..+++.||||++.+. ....+..|.+++..+.+|++|..+..+.......++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999999999999999985432 12346678888888877888888888888888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~----- 151 (321)
T cd05591 81 GDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGV----- 151 (321)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCc-----
Confidence 899988874 4579999999999999999999999999999999999999 4778999999999976433221
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
......||..|+|||++.+..++.++|||||||++|||++|+.||.... ....+..+...... +...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~---~~~~~~~i~~~~~~-----~p~~~~~ 221 (321)
T cd05591 152 --TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN---EDDLFESILHDDVL-----YPVWLSK 221 (321)
T ss_pred --cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC---HHHHHHHHHcCCCC-----CCCCCCH
Confidence 1234579999999999999999999999999999999999999998743 33344444333221 1234689
Q ss_pred HHHHHHHHHhcCCCCCCCC
Q 011988 246 EFASYFHYCRSLRFDDKPD 264 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt 264 (473)
++.++|..||..||++||+
T Consensus 222 ~~~~ll~~~L~~dp~~R~~ 240 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLG 240 (321)
T ss_pred HHHHHHHHHhccCHHHcCC
Confidence 9999999999999999994
No 75
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.1e-40 Score=339.42 Aligned_cols=260 Identities=20% Similarity=0.294 Sum_probs=198.9
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++++.||.|+||.||+|++..+++.||||++.+. ....+..|+.+++.++| ++|..+..++..+...++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN-PWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceEEEEEcCCeEEEE
Confidence 5799999999999999999999999999999986432 12346789999999985 5555556666778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 80 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 80 MEYLPGGDMMTLLMK-KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred ECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceeccccc
Confidence 9999 8899999874 4569999999999999999999999999999999999999 478899999999997653321
Q ss_pred Ccccc-----------------cc--------------ccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcC
Q 011988 160 THQHI-----------------PY--------------RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 208 (473)
Q Consensus 160 ~~~~~-----------------p~--------------~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG 208 (473)
..... +. ......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 10000 00 001134799999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 209 SLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 209 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
..||.+... .+.+..+........... ...+++++.++|..|+. +|.+|++...+.++|.+.|
T Consensus 236 ~~Pf~~~~~---~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~ 298 (364)
T cd05599 236 YPPFCSDNP---QETYRKIINWKETLQFPD-EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF 298 (364)
T ss_pred CCCCCCCCH---HHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCC
Confidence 999987432 333333332111111110 12468899999999996 9999998444444455443
No 76
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.4e-40 Score=334.05 Aligned_cols=259 Identities=19% Similarity=0.305 Sum_probs=201.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCC----chhHHHHHHHHHHhcCC-CCCCeeEEeeEeCC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGG-TGIPNLRWFGVEGD 75 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~-~~i~~~~~~~~~~~ 75 (473)
.++|++.+.||.|+||.||+|.+.. +++.||+|++.... ...+..|+.++..+.+| +++..+..+...+.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 5689999999999999999997543 45789999864332 23467899999999544 45555555555667
Q ss_pred eEEEEEecC-CCCHHHHHHHcC----------------------------------------------------------
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCS---------------------------------------------------------- 96 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~---------------------------------------------------------- 96 (473)
..+++|||+ +++|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 788999999 889999886321
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccCCCccc
Q 011988 97 --RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG 174 (473)
Q Consensus 97 --~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~G 174 (473)
..+++..+..++.||+.||+|||++||+||||||+|||++ .++.++|+|||+++.+...... .......+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~-----~~~~~~~~ 237 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDY-----VRKGDARL 237 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcch-----hhccCCCC
Confidence 2578999999999999999999999999999999999995 6788999999999876432211 11233456
Q ss_pred CccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHH
Q 011988 175 TARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHY 253 (473)
Q Consensus 175 t~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~ 253 (473)
+..|+|||++.+..++.++|||||||+||||++ |..||.+...... ....+... ... .....+++++.+++..
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~~~~~~~-~~~---~~~~~~~~~~~~l~~~ 311 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FCRRLKEG-TRM---RAPEYATPEIYSIMLD 311 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HHHHHhcc-CCC---CCCccCCHHHHHHHHH
Confidence 778999999999999999999999999999997 9999987433221 11111111 111 1124567899999999
Q ss_pred HhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 254 CRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 254 cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
||+.+|++||++.+|.+.|++++..
T Consensus 312 cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 312 CWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999998753
No 77
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.5e-40 Score=331.38 Aligned_cols=236 Identities=19% Similarity=0.241 Sum_probs=193.9
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|++..+++.||||++.+. ....+..|..++..+.+|++|..+..+....+..++||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999999999999999985432 22345678888888777788888877888888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 g~L~~~i~~-~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~---~~~~~kL~DfG~~~~~~~~~~----- 151 (320)
T cd05590 81 GDLMFHIQK-SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKEGIFNGK----- 151 (320)
T ss_pred chHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeeCCCCeecCcCCC-----
Confidence 899988874 45799999999999999999999999999999999999994 778999999999875432211
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. ....+..+...... +...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~---~~~~~~~i~~~~~~-----~~~~~~~ 221 (320)
T cd05590 152 --TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN---EDDLFEAILNDEVV-----YPTWLSQ 221 (320)
T ss_pred --cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC---HHHHHHHHhcCCCC-----CCCCCCH
Confidence 1234579999999999999899999999999999999999999998743 33344444332221 2345789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHH
Q 011988 246 EFASYFHYCRSLRFDDKPDYAY 267 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~~~ 267 (473)
++.++|..||..||++||++.+
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCCC
Confidence 9999999999999999999744
No 78
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.7e-40 Score=333.71 Aligned_cols=263 Identities=20% Similarity=0.271 Sum_probs=204.3
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.+..+++.||||++.+.. ...+..|..++..+.++++|..+..+.......++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999965432 2346789999999988888888888888889999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. .+.+++..++.|+.||+.||+|||++||+||||||+|||++ ..+.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~~----- 151 (327)
T cd05617 81 GDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGD----- 151 (327)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEeccccceeccCCCC-----
Confidence 899888863 45799999999999999999999999999999999999994 678899999999975332211
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC----CHHHHHHHHhhccccccHHHHhc
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG----TKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
......||..|+|||++.+..++.++|||||||+||||++|..||...... ........+..... .+..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~ 224 (327)
T cd05617 152 --TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-----RIPR 224 (327)
T ss_pred --ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-----CCCC
Confidence 113467999999999999999999999999999999999999999653221 11222222222211 1334
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccccccccc
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 295 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 295 (473)
.++.++.+++..||..||++|+++.... .++++. ..++-...+|+.....
T Consensus 225 ~~~~~~~~li~~~L~~dP~~R~~~~~~~-~~~~i~---~h~~f~~~~~~~~~~~ 274 (327)
T cd05617 225 FLSVKASHVLKGFLNKDPKERLGCQPQT-GFSDIK---SHTFFRSIDWDLLEKK 274 (327)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCC-CHHHHH---cCCCCCCCCHHHHHhC
Confidence 5788999999999999999999854211 111211 2244556778876543
No 79
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2e-40 Score=333.33 Aligned_cols=237 Identities=20% Similarity=0.283 Sum_probs=191.1
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||++.+..+++.||||++.+. ....+..|+.+++.+.|+ +|..+..+....+..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHP-FLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC-CCcceEEEEEcCCEEEEEEeCCCC
Confidence 4799999999999999999999999985432 223567899999999865 4555556667788899999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||||+ ..+.+||+|||+++.......
T Consensus 80 g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DfG~~~~~~~~~~----- 150 (328)
T cd05593 80 GELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITDAA----- 150 (328)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecCcCCccCCCccc-----
Confidence 899888864 45799999999999999999999999999999999999994 778999999999975432211
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
......||+.|+|||++.+..++.++|||||||+||||++|..||.+... ......+..... .+...+++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~---~~~~~~~~~~~~-----~~p~~~~~ 220 (328)
T cd05593 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEDI-----KFPRTLSA 220 (328)
T ss_pred --ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH---HHHHHHhccCCc-----cCCCCCCH
Confidence 11345799999999999998999999999999999999999999976432 222333222211 23456789
Q ss_pred HHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011988 246 EFASYFHYCRSLRFDDKP-----DYAYLK 269 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RP-----t~~~l~ 269 (473)
++.++|..||..||++|+ ++.+|.
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il 249 (328)
T cd05593 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIM 249 (328)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHh
Confidence 999999999999999997 666653
No 80
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=321.43 Aligned_cols=253 Identities=19% Similarity=0.228 Sum_probs=201.7
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCC------e
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGD------Y 76 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~------~ 76 (473)
.|..+++||+|+||+||+|+++.+|+.||+|.+.-. ......+|+.+|+.|+|.++|..+..+....+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 477788899999999999999999999999983322 22346899999999999886666666655544 7
Q ss_pred EEEEEecCCCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 77 NVLVIDLLGPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~---~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
.++|+||+..+|.++++... ..++...++.++.||+.||+|||+++|+||||||+||||+ +.+.+||+|||+|+
T Consensus 92 l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~---~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 92 LYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS---SSGVLKLADFGLAR 168 (323)
T ss_pred EEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC---CCCcEeeeccchHH
Confidence 88999999999999999776 4588899999999999999999999999999999999995 78999999999999
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 232 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 232 (473)
.+.-+ .+.-...++|..|.|||+++|. .|+...||||+|||+.||++++.-|.+....+....+.++....-
T Consensus 169 a~~ip-------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 169 AFSIP-------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN 241 (323)
T ss_pred HhcCC-------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 65432 2233566899999999999998 599999999999999999999999998765333333333221110
Q ss_pred ----------------------cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 233 ----------------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 233 ----------------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
........+...+...+++..||+++|.+|.++...++
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence 00111111223358899999999999999999877643
No 81
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4e-40 Score=330.45 Aligned_cols=254 Identities=21% Similarity=0.266 Sum_probs=196.2
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHH-HHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAK-LYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~-il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
+.||+|+||.||+|++..+++.||+|++.+.. ...+..|.. +++.+.| ++|..+..++...+..+++|||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH-PFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCC-CCCCceeEEEEcCCeEEEEEeCCC
Confidence 47999999999999999999999999854321 122344444 3455665 55555666667788899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 80 ~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~a~~~~~~~~---- 151 (325)
T cd05602 80 GGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENIEHNG---- 151 (325)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEccCCCCcccccCCC----
Confidence 7799998874 45688999999999999999999999999999999999994 678999999999975433221
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCc
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 244 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 244 (473)
......||..|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+...... +...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~i~~~~~~-----~~~~~~ 220 (325)
T cd05602 152 ---TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---TAEMYDNILNKPLQ-----LKPNIT 220 (325)
T ss_pred ---CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC---HHHHHHHHHhCCcC-----CCCCCC
Confidence 1234679999999999999999999999999999999999999997643 33334444333221 234678
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHH-HHHHHHHHHHhCCCCCCcccccccc
Q 011988 245 TEFASYFHYCRSLRFDDKPDYAYL-KRLFRDLFIREGFQFDYVFDWTILK 293 (473)
Q Consensus 245 ~~l~~li~~cl~~dp~~RPt~~~l-~~~L~~l~~~~~~~~~~~~dw~~~~ 293 (473)
.++.++|..||..||.+||++.+. .+++++ .+...++|+...
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~-------~~~~~~~~~~~~ 263 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKDDFMEIKNH-------IFFSPINWDDLI 263 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCHHHHhcC-------cccCCCCHHHHH
Confidence 999999999999999999997643 233322 334567887664
No 82
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-41 Score=340.15 Aligned_cols=249 Identities=21% Similarity=0.306 Sum_probs=199.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEE-cccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-NVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~-~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
+..|+++++||+||.+.||++.... ...||+|. .... ....+..|+.+|.+|+++..|..++.|...+.+.|||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 4569999999999999999998643 44555554 2222 2344889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 81 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 81 ~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+-..+|..+|+.....+..-.+..+..||+.|+.++|..||||.||||.|||| -.|.+||+|||+|..+..+.+
T Consensus 439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl----VkG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL----VKGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE----EeeeEEeeeechhcccCcccc
Confidence 9999999999999766666656889999999999999999999999999999999 478999999999998877655
Q ss_pred ccccccccCCCcccCccccccccccCCC-----------CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIE-----------QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 229 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-----------~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~ 229 (473)
... ...-+||+.||+||.+.... .++++||||||||||+|+.|+.||..... ...++..|..
T Consensus 515 sI~-----kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl~aI~~ 587 (677)
T KOG0596|consen 515 SIV-----KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKLHAITD 587 (677)
T ss_pred cee-----eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHHHhhcC
Confidence 331 24568999999999986432 46899999999999999999999976432 3344444444
Q ss_pred ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 230 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 230 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
.......+.+.. +.++.++++.||.+||++||+..+|
T Consensus 588 P~~~Iefp~~~~--~~~li~~mK~CL~rdPkkR~si~eL 624 (677)
T KOG0596|consen 588 PNHEIEFPDIPE--NDELIDVMKCCLARDPKKRWSIPEL 624 (677)
T ss_pred CCccccccCCCC--chHHHHHHHHHHhcCcccCCCcHHH
Confidence 322222222222 2349999999999999999997766
No 83
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.4e-40 Score=340.71 Aligned_cols=252 Identities=21% Similarity=0.284 Sum_probs=193.1
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|.++++||.|+||.||+|.+..+++.||||++.+. ....+..|+++++.+.|++ |..+..++....+.++|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPW-VVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCC-cceEEEEEEcCCeeEEE
Confidence 5799999999999999999999999999999985432 2245678999999998554 55556666778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 80 MEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEEeeccccccccccc
Confidence 9999 8899999874 45799999999999999999999999999999999999994 77899999999997543211
Q ss_pred Cccc-------ccc---------------------------------ccCCCcccCccccccccccCCCCCchhhHHHHH
Q 011988 160 THQH-------IPY---------------------------------RENKNLTGTARYASMNTHLGIEQSRRDDLESLG 199 (473)
Q Consensus 160 ~~~~-------~p~---------------------------------~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlG 199 (473)
.... ... ......+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0000 000 000135799999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCC---CHHHH
Q 011988 200 YVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKP---DYAYL 268 (473)
Q Consensus 200 viL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RP---t~~~l 268 (473)
|+||||++|..||.+... ...+..+.........+ -...++.++.++|.+||. +|.+|+ ++.++
T Consensus 236 vil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p-~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~ 302 (377)
T cd05629 236 AIMFECLIGWPPFCSENS---HETYRKIINWRETLYFP-DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI 302 (377)
T ss_pred hhhhhhhcCCCCCCCCCH---HHHHHHHHccCCccCCC-CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence 999999999999976432 23333332211100000 012467899999999997 777764 75555
No 84
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.7e-40 Score=330.73 Aligned_cols=260 Identities=19% Similarity=0.268 Sum_probs=200.9
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.+..+++.||+|++.+.. ...+..|+.++..+.+|++|..+..+.......++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999865421 2236678888888866777777777788888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|..++.. ...+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~---~~~~~kL~DfG~~~~~~~~~~----- 151 (329)
T cd05618 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCKEGLRPGD----- 151 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCCEEEeeCCccccccCCCC-----
Confidence 899888764 45799999999999999999999999999999999999994 778999999999975432211
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC------CHHHHHHHHhhccccccHHHH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG------TKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~------~~~~~~~~i~~~~~~~~~~~l 239 (473)
......||..|+|||++.+..++.++|||||||++|||++|+.||...... ........+..... .+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~ 224 (329)
T cd05618 152 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-----RI 224 (329)
T ss_pred --ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-----CC
Confidence 123467999999999999999999999999999999999999999642211 11112222222221 13
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHH---HHHHHHHHHHHhCCCCCCcccccccccc
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAY---LKRLFRDLFIREGFQFDYVFDWTILKYQ 295 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~---l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 295 (473)
...++.++.++|..||..||++||++.. +.++++ .++-..++|......
T Consensus 225 p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~-------hp~f~~~~~~~~~~~ 276 (329)
T cd05618 225 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG-------HPFFRNVDWDLMEQK 276 (329)
T ss_pred CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc-------CCCCCCCCHHHHHcC
Confidence 4567899999999999999999998421 122232 244455678766443
No 85
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3e-40 Score=323.69 Aligned_cols=253 Identities=23% Similarity=0.326 Sum_probs=201.7
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCC-----cEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN-----EEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~-----~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
.++|++.+.||+|+||.||+|.+...+ ..||+|...... ...+.+|+.++..++|++++. +..+......
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~-~~~~~~~~~~ 82 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC-LLGVCTKEQP 82 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccce-EEEEEcCCCc
Confidence 467999999999999999999976554 679999864433 234778999999998655554 4455566677
Q ss_pred EEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC
Q 011988 77 NVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 140 (473)
.+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+|+||||+|||++ +
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~---~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG---E 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc---C
Confidence 89999999 789999987532 4588899999999999999999999999999999999994 6
Q ss_pred CCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 011988 141 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGT 219 (473)
Q Consensus 141 ~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~ 219 (473)
++.+||+|||+++....... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||.+...
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-- 232 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-- 232 (283)
T ss_pred CCcEEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 78899999999976543221 111234467889999999998899999999999999999998 9999987543
Q ss_pred HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 220 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
.+.+..+...... .....+|+++.+|+..||+.||++||++.+|.+.|+.
T Consensus 233 -~~~~~~i~~~~~~----~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 233 -QEVIEMIRSRQLL----PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHHHcCCcC----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 2333333322221 2345789999999999999999999999999988864
No 86
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.4e-40 Score=336.76 Aligned_cols=252 Identities=22% Similarity=0.270 Sum_probs=193.7
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|+++++||+|+||.||+|++..+++.||||++.+. ....+..|+.+++.+.|++++ .+......++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv-~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVV-KLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcc-eEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999985432 234577899999999865555 455556677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+|..+....
T Consensus 80 ~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 80 MDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC---CCCCEEEEeCCCCccccccc
Confidence 9999 8899999874 45689999999999999999999999999999999999994 77899999999986442110
Q ss_pred Cccc------------------------------------cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHH
Q 011988 160 THQH------------------------------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLM 203 (473)
Q Consensus 160 ~~~~------------------------------------~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ 203 (473)
.... .........+||+.|+|||++.+..++.++|||||||+||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0000 0000112457999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCC---CHHHH
Q 011988 204 YFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKP---DYAYL 268 (473)
Q Consensus 204 elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RP---t~~~l 268 (473)
||++|+.||.+... ......+......... .....+++++.++|..|+ .+|.+|+ ++.++
T Consensus 236 ell~G~~Pf~~~~~---~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 236 EMLVGQPPFLADTP---AETQLKVINWETTLHI-PSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred ehhhCCCCCCCCCH---HHHHHHHhccCccccC-CCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999987543 2222222211111100 012357889999999977 5999999 65555
No 87
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.2e-40 Score=336.18 Aligned_cols=245 Identities=20% Similarity=0.258 Sum_probs=190.6
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.++|+++++||.|+||.||+|++..+++.||||++.... ...+.+|+++++.++|.+++ .+..+.......+++|
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVV-KCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcc-eeeeEeccCCeEEEEE
Confidence 357899999999999999999999999999999964432 24578899999999865555 4555566777889999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|.+. ..+.+..+..|+.||+.||.|||++||+||||||+||||+ .++.+||+|||+++.+.....
T Consensus 152 e~~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 152 EFMDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred ecCCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEcccccceecccccc
Confidence 999 6777543 2356788899999999999999999999999999999994 778999999999987643221
Q ss_pred ccccccccCCCcccCccccccccccC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
......||..|+|||++.. ...+.++|||||||+||||++|+.||......+.......+.....
T Consensus 224 -------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--- 293 (353)
T PLN00034 224 -------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP--- 293 (353)
T ss_pred -------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC---
Confidence 1234579999999998743 2346799999999999999999999975433332222222221111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
......++.++.+||..||..||++||++.+|++
T Consensus 294 -~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 294 -PEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred -CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1123467899999999999999999999887743
No 88
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.1e-40 Score=330.72 Aligned_cols=263 Identities=22% Similarity=0.264 Sum_probs=201.1
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||+|+||.||++++..+++.||||++.+. ....+..|..+++.++ +++|..+..++..+...++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD-RRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCceEEEEecCCeEEEE
Confidence 5799999999999999999999999999999986431 2334678888888886 55566666677788899999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++......+++..+..++.||+.||+|||++||+||||||+||||+ .++.+||+|||++..+....
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC---CCCCEEEEECCceeecCCCC
Confidence 9998 8899999986667799999999999999999999999999999999999994 77899999999997654432
Q ss_pred CccccccccCCCcccCccccccccccC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.. ..+.+..+.......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~---~~~~~~~i~~~~~~~ 227 (331)
T cd05597 157 TV------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIMNHKEHF 227 (331)
T ss_pred Cc------cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCcc
Confidence 21 1123469999999999873 347889999999999999999999997643 233344443322211
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCccccccc
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYLKRLFRDLFIREGFQFDYVFDWTIL 292 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~ 292 (473)
........+++++.++|..||..+++. |+++.++ +++.| ...++|...
T Consensus 228 ~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~---l~hp~-------~~~~~~~~~ 277 (331)
T cd05597 228 QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDF---KDHPF-------FEGIDWDNI 277 (331)
T ss_pred cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHH---hcCCC-------CCCCCHHHH
Confidence 222223457899999999998753332 5665444 44432 334567664
No 89
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.7e-40 Score=333.84 Aligned_cols=258 Identities=19% Similarity=0.269 Sum_probs=201.3
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.+..+++.||||++.+.. ...+..|..++..+.+|++|..+..++......++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 47999999999999999999999999865421 2346789999999977777877877888888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++.......
T Consensus 81 g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~~~----- 151 (329)
T cd05588 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMCKEGIRPGD----- 151 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcCccccccccCCC-----
Confidence 899888863 45799999999999999999999999999999999999994 678999999999975322111
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC------HHHHHHHHhhccccccHHHH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~------~~~~~~~i~~~~~~~~~~~l 239 (473)
......||..|+|||++.+..++.++|||||||++|||++|+.||....... .......+..... .+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 224 (329)
T cd05588 152 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-----RI 224 (329)
T ss_pred --ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-----CC
Confidence 1234679999999999999999999999999999999999999996432111 1112222222221 13
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHH---HHHHHHHHHHHhCCCCCCcccccccc
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAY---LKRLFRDLFIREGFQFDYVFDWTILK 293 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~---l~~~L~~l~~~~~~~~~~~~dw~~~~ 293 (473)
...++.++.++|..||..||.+|+++.. +.+++++. +-...+|....
T Consensus 225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp-------~~~~~~~~~~~ 274 (329)
T cd05588 225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHP-------FFRNIDWDLLE 274 (329)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCC-------CCCCCCHHHHH
Confidence 3567899999999999999999998432 23334332 23446777654
No 90
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.3e-40 Score=334.49 Aligned_cols=251 Identities=21% Similarity=0.320 Sum_probs=196.5
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeE-----e
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGV-----E 73 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~-----~ 73 (473)
.+.++|.+++.||.|+||.||+|.+..+++.||||++.... ...+.+|+.+++.++|.+++..+..+.. .
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 46789999999999999999999999999999999864432 2346689999999998777666544432 2
Q ss_pred CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
....+++|++++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~ 166 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGLAR 166 (343)
T ss_pred cCcEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC---CCCCEEEcCCccce
Confidence 24568999999999999886 45699999999999999999999999999999999999994 77899999999998
Q ss_pred cccCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK- 231 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~- 231 (473)
...... ....||..|+|||++.+ ..++.++|||||||++|+|++|..||.+.........+.......
T Consensus 167 ~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (343)
T cd07878 167 QADDEM----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPS 236 (343)
T ss_pred ecCCCc----------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 654321 34578999999999987 468999999999999999999999997643221111111110000
Q ss_pred ----------------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 ----------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 ----------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.......+..++++.+.+||.+||..||++||++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell 296 (343)
T cd07878 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEAL 296 (343)
T ss_pred HHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 00111222345677889999999999999999987774
No 91
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=6.5e-40 Score=318.27 Aligned_cols=254 Identities=20% Similarity=0.352 Sum_probs=204.6
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
..+|.+.++||.|+||.||+|.+..+++.||+|+..... ...+..|+++++.++|.+++..+ .+.......+++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~~~~lv~e~ 83 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL-GVCTREPPFYIITEF 83 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheE-EEEcCCCCcEEEEEe
Confidence 456999999999999999999999999999999865443 34578899999999876555544 455566778999999
Q ss_pred C-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 84 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 84 ~-g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ +++.+||+|||++.........
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCcEEeCCCccccccccceee
Confidence 8 789999987543 4589999999999999999999999999999999999994 7789999999999876543211
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... ......+... .. ....
T Consensus 161 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~~~~~~~~-~~---~~~~ 227 (263)
T cd05052 161 ------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYELLEKG-YR---MERP 227 (263)
T ss_pred ------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHCC-CC---CCCC
Confidence 1122344678999999999999999999999999999998 9999976432 2222222221 11 1234
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
..+|.++.+++.+||..||++||++.+|.+.|+.++
T Consensus 228 ~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 228 EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 568899999999999999999999999999998764
No 92
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=7.1e-40 Score=321.60 Aligned_cols=246 Identities=19% Similarity=0.228 Sum_probs=191.1
Q ss_pred EeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
||+|+||+||+|.+..+++.||||++.+.. ...+..|+.+++.+.| +++..+..++......+++|||+ +++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS-RFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCC-CcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 699999999999999999999999854322 1345679999999975 55555666666777889999999 889
Q ss_pred HHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 88 LEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 88 L~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||++..+.....
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~~---- 152 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDLGLAVELKDGQS---- 152 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCccceecCCCCc----
Confidence 9888743 234699999999999999999999999999999999999994 678899999999976644322
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHH-HHHHHHhhccccccHHHHhcCC
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
......||..|+|||++.+..++.++|||||||++|||++|+.||......... .....+.... ..+...+
T Consensus 153 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 224 (280)
T cd05608 153 ---KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS-----VTYPDKF 224 (280)
T ss_pred ---cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC-----CCCcccC
Confidence 123457999999999999999999999999999999999999999764332211 1112211111 1223467
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHH--HHHHHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAY--LKRLFRDLF 276 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~--l~~~L~~l~ 276 (473)
+.++.+++..||+.||++||++++ +.+++++.|
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~ 259 (280)
T cd05608 225 SPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPL 259 (280)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChh
Confidence 899999999999999999995432 333344444
No 93
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.5e-40 Score=327.48 Aligned_cols=234 Identities=22% Similarity=0.285 Sum_probs=186.7
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHH-HHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAK-LYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~-il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
+.||+|+||+||+|.+..+++.||||++.+.. ...+..|.. +++.+.|+ +|..+..+....+..++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp-~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHP-FLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCC-CCCCeeEEEEeCCEEEEEEcCCC
Confidence 47999999999999999999999999854321 223444544 34566654 4555555666778899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||||+ .++.+||+|||+++.......
T Consensus 80 ~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~---~~~~~kl~Dfg~~~~~~~~~~---- 151 (323)
T cd05575 80 GGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGIEHSK---- 151 (323)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeccCCCcccccCCC----
Confidence 7899988874 45799999999999999999999999999999999999994 778999999999975432211
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCc
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 244 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 244 (473)
......||..|+|||++.+..++.++|||||||+||||++|..||.... ..+.+..+...... +...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~~-----~~~~~~ 220 (323)
T cd05575 152 ---TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---TAEMYDNILNKPLR-----LKPNIS 220 (323)
T ss_pred ---ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC---HHHHHHHHHcCCCC-----CCCCCC
Confidence 1234579999999999999999999999999999999999999997643 33444444433221 234678
Q ss_pred HHHHHHHHHHhcCCCCCCCCHH
Q 011988 245 TEFASYFHYCRSLRFDDKPDYA 266 (473)
Q Consensus 245 ~~l~~li~~cl~~dp~~RPt~~ 266 (473)
.++.++|..||+.||.+||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCCC
Confidence 9999999999999999999975
No 94
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.2e-40 Score=334.20 Aligned_cols=247 Identities=21% Similarity=0.267 Sum_probs=194.0
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeE-----eC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGV-----EG 74 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~-----~~ 74 (473)
+.++|++.+.||+|+||.||+|.+..+++.||||++... ....+.+|+.+++.++|++++..+..+.. ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 568999999999999999999999999999999985432 23456789999999998777766655432 22
Q ss_pred CeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 75 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 75 ~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
...++||||++++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 102 ~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~ 175 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLART 175 (364)
T ss_pred CeEEEEEeCCCCCHHHHHH---hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC---CCCcEEEEeCCCccc
Confidence 4579999999999988875 3588999999999999999999999999999999999994 678999999999986
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
...... .....||..|+|||++.+..++.++|||||||+||||++|+.||.+.... ..+.++.......
T Consensus 176 ~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~ 244 (364)
T cd07875 176 AGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI---DQWNKVIEQLGTP 244 (364)
T ss_pred cCCCCc--------ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCC
Confidence 543211 13457899999999999999999999999999999999999999775432 2222221100000
Q ss_pred -------------------------cHHHH------------hcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 235 -------------------------SIEAL------------CRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 235 -------------------------~~~~l------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
....+ ....+.++.++|.+||..||.+|||+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~ 315 (364)
T cd07875 245 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315 (364)
T ss_pred CHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHH
Confidence 00000 01124578999999999999999998776
No 95
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.7e-40 Score=336.69 Aligned_cols=255 Identities=15% Similarity=0.183 Sum_probs=199.6
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEc--CCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNI--QTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~--~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.+..+|.++++||.|+||.||+|... .++..||||..... ....+|+++++.|+|++++..+. ++......+++|
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~l~h~~iv~~~~-~~~~~~~~~lv~ 165 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKTISHRAIINLIH-AYRWKSTVCMVM 165 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHhcCCCCccceee-eEeeCCEEEEEe
Confidence 34567999999999999999999754 35678999986543 34578999999999766665554 455667889999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
++++++|.+++. ....+++.+++.|+.||+.||.|||++|||||||||+|||++ ..+.+||+|||+++.+......
T Consensus 166 e~~~~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~---~~~~~~l~DfG~a~~~~~~~~~ 241 (392)
T PHA03207 166 PKYKCDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD---EPENAVLGDFGAACKLDAHPDT 241 (392)
T ss_pred hhcCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEccCccccccCccccc
Confidence 999999999985 456799999999999999999999999999999999999994 7789999999999866543221
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc--------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS-------- 233 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-------- 233 (473)
.......||..|+|||++.+..++.++|||||||+||||++|+.||.+.........+..+......
T Consensus 242 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 316 (392)
T PHA03207 242 -----PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN 316 (392)
T ss_pred -----ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence 1123567999999999999999999999999999999999999999876544333333332211000
Q ss_pred -------------------ccHHHH--hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 234 -------------------TSIEAL--CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 234 -------------------~~~~~l--~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
...+.+ ...++.++.++|.+||..||++||++.+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000 1245678999999999999999999888743
No 96
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=7.4e-40 Score=322.29 Aligned_cols=261 Identities=19% Similarity=0.224 Sum_probs=202.2
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.|++.++||+|+||.||++.+..+++.||||++.... ...+..|+.+++.++|++++ .+...+..++..+++|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVV-SLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEe-eeeeeecCCCeEEEEE
Confidence 4899999999999999999999999999999854322 23456799999999865544 4555556677899999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ +.+.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---DYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC---CCCCEEEeeCCCceecCCCC
Confidence 999 78999887643 34699999999999999999999999999999999999994 67899999999998654322
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. .....|+..|+|||++.+..++.++|||||||++|||++|..||.+.........+...... .....
T Consensus 157 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~----~~~~~ 224 (285)
T cd05605 157 T--------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE----DQEEY 224 (285)
T ss_pred c--------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh----ccccc
Confidence 1 12347899999999999989999999999999999999999999875432222222211111 11122
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCccccccccc
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKP-----DYAYLKRLFRDLFIREGFQFDYVFDWTILKY 294 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RP-----t~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 294 (473)
...++..+.+||..||..||++|| ++++| +++ .+-..++|...+.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l---~~~-------~~~~~~~~~~~~~ 274 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEV---KAH-------PFFRTANFKRLEA 274 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHH---hcC-------cCccCCCHHHHhh
Confidence 345789999999999999999999 55555 332 2233466776643
No 97
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1e-39 Score=319.59 Aligned_cols=260 Identities=20% Similarity=0.253 Sum_probs=201.8
Q ss_pred CCCccCCceEEEeeEeecCceEEEEEEEcCCCc----EEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeE
Q 011988 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGV 72 (473)
Q Consensus 1 m~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~ 72 (473)
|+....++|++.++||.|+||.||+|.+..+++ .||||+..... ...+..|+.+++.+.|++++..+ .++.
T Consensus 1 ~~~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-~~~~ 79 (279)
T cd05109 1 MRILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLL-GICL 79 (279)
T ss_pred CcccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEE-EEEc
Confidence 667778899999999999999999999877766 48999854332 23467888889988865555444 4444
Q ss_pred eCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCC
Q 011988 73 EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 151 (473)
Q Consensus 73 ~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 151 (473)
. ...+++|+++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ +.+.+||+|||+
T Consensus 80 ~-~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG~ 155 (279)
T cd05109 80 T-STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFGL 155 (279)
T ss_pred C-CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCCc
Confidence 3 3456788877 8899999876566799999999999999999999999999999999999994 677899999999
Q ss_pred cccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhc
Q 011988 152 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEK 230 (473)
Q Consensus 152 a~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~ 230 (473)
++.+........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....+...
T Consensus 156 ~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~ 227 (279)
T cd05109 156 ARLLDIDETEYH-----ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPDLLEKG 227 (279)
T ss_pred eeecccccceee-----cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCC
Confidence 987654322111 112245678999999999899999999999999999998 999997644321 11212211
Q ss_pred cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 231 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 231 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
. ... ....++.++.+++..||..||++||++.+|.+.|+++..
T Consensus 228 ~-~~~---~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 228 E-RLP---QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred C-cCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1 111 124578999999999999999999999999988877753
No 98
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=7e-40 Score=332.63 Aligned_cols=252 Identities=19% Similarity=0.208 Sum_probs=194.1
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEe-----
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 73 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~----- 73 (473)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ...+.+|+.+++.++|++++..+..+...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 35689999999999999999999999999999999854322 23467899999999987777766655432
Q ss_pred CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
....+++|||+.++|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~---~~~~~kl~Dfg~~~ 167 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLAR 167 (355)
T ss_pred cceeEEEhhhhcccHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC---CCCCEEEeeCcccc
Confidence 23579999999989888775 3589999999999999999999999999999999999994 67899999999998
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc--
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-- 231 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~-- 231 (473)
....... .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+.................
T Consensus 168 ~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (355)
T cd07874 168 TAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239 (355)
T ss_pred cCCCccc--------cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 6543211 134578999999999999999999999999999999999999997643211111110000000
Q ss_pred -----ccc---------------cHH------------HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 -----VST---------------SIE------------ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 -----~~~---------------~~~------------~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
... ... ......+.++.++|.+||..||++||++.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell 309 (355)
T cd07874 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEAL 309 (355)
T ss_pred HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHh
Confidence 000 000 00112356789999999999999999988774
No 99
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=8.9e-40 Score=337.00 Aligned_cols=257 Identities=22% Similarity=0.288 Sum_probs=203.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCC-----CcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
.++|+++++||+|+||.||+|.+... +..||||++.... ...+.+|+.+++.+..|++|..+..++.....
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 45688999999999999999987533 3479999865432 23578899999999856677777777777888
Q ss_pred EEEEEecC-CCCHHHHHHHcC-----------------------------------------------------------
Q 011988 77 NVLVIDLL-GPSLEDLFNFCS----------------------------------------------------------- 96 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~----------------------------------------------------------- 96 (473)
.+|||||+ +++|.+++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 99999999 889998876421
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC
Q 011988 97 ------------------------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 97 ------------------------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 140 (473)
..+++..++.++.||+.||.|||+++|+||||||+|||++ .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~---~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA---Q 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe---C
Confidence 2477888999999999999999999999999999999995 6
Q ss_pred CCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 011988 141 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGT 219 (473)
Q Consensus 141 ~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~ 219 (473)
++.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||+||||++ |..||.......
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNY-----VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred CCEEEEEeCCcceeccccccc-----cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 788999999999866433211 11233457788999999999899999999999999999997 999997654322
Q ss_pred HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 220 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
..+..+.... .. .....+|.++.+++.+||+.||++||++.+|.+.|+.++
T Consensus 348 --~~~~~~~~~~-~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 348 --TFYNKIKSGY-RM---AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred --HHHHHHhcCC-CC---CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1122222211 11 123467899999999999999999999999999999876
No 100
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=4.7e-40 Score=336.15 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=196.7
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.++|++.++||+|+||.||+|++..+++.||||++.+. ....+..|+.+++.++|++ |..+..+.......++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~-iv~~~~~~~~~~~~~l 120 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEW-IVQLHYAFQDDKYLYM 120 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCC-cceEEEEEecCCEEEE
Confidence 46799999999999999999999999999999986432 2234678999999988554 5555566677888999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
||||+ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 121 VMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc---CCCCEEEEeccceeeccCC
Confidence 99999 8899999873 4689999999999999999999999999999999999994 7889999999999865432
Q ss_pred CCccccccccCCCcccCccccccccccCC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGI----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
... ......||+.|+|||++.+. .++.++|||||||+||||++|+.||.+... ...+.++.......
T Consensus 196 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---~~~~~~i~~~~~~~ 266 (370)
T cd05596 196 GMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---VGTYSKIMDHKNSL 266 (370)
T ss_pred Ccc------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH---HHHHHHHHcCCCcC
Confidence 210 11345799999999998754 378999999999999999999999987432 33444444322111
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCC--CCCHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYL 268 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l 268 (473)
..+. ...++.++.++|..||..+|++ |+++++|
T Consensus 267 ~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~el 301 (370)
T cd05596 267 TFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEI 301 (370)
T ss_pred CCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHH
Confidence 1111 1246899999999999999987 9997766
No 101
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-40 Score=323.55 Aligned_cols=267 Identities=22% Similarity=0.332 Sum_probs=216.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
+.|++++.||.|.-|+||+|+...++..+|+|++.+.. ....+.|.+||..++ |+.++.++...+..++.|++
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-HPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-CCccchhhheeeccceeEEE
Confidence 46889999999999999999999999999999966543 345778999999998 77888888888999999999
Q ss_pred EecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 81 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|||| ||+|..+++.. ++.|++..+..++.+|+.||+|||-.|||.|||||+|||| .++|+|.|+||.|+......
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCCC
Confidence 9999 99999998755 4469999999999999999999999999999999999999 58999999999998654210
Q ss_pred CCc-------------------------------cc-----------------cc-cccCCCcccCccccccccccCCCC
Q 011988 159 ATH-------------------------------QH-----------------IP-YRENKNLTGTARYASMNTHLGIEQ 189 (473)
Q Consensus 159 ~~~-------------------------------~~-----------------~p-~~~~~~~~Gt~~Y~APE~~~~~~~ 189 (473)
.+. .. .| -.....++||-.|+|||++.|...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 000 00 00 012356899999999999999999
Q ss_pred CchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCC----H
Q 011988 190 SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD----Y 265 (473)
Q Consensus 190 s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt----~ 265 (473)
+.++|+|+|||+||||+.|..||.|.+. .+.+.+|..+....+-. ..++..+++||+.+|.+||.+|.. +
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~---~~Tl~NIv~~~l~Fp~~---~~vs~~akDLIr~LLvKdP~kRlg~~rGA 386 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNN---KETLRNIVGQPLKFPEE---PEVSSAAKDLIRKLLVKDPSKRLGSKRGA 386 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCc---hhhHHHHhcCCCcCCCC---CcchhHHHHHHHHHhccChhhhhccccch
Confidence 9999999999999999999999998544 45555555544332211 245688999999999999999987 5
Q ss_pred HHHHHHHHHHHHHhCCCCCCcccccccc
Q 011988 266 AYLKRLFRDLFIREGFQFDYVFDWTILK 293 (473)
Q Consensus 266 ~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 293 (473)
.+|++ ..+..-++|....
T Consensus 387 ~eIK~----------HpFF~gVnWaLir 404 (459)
T KOG0610|consen 387 AEIKR----------HPFFEGVNWALIR 404 (459)
T ss_pred HHhhc----------CccccCCChhhee
Confidence 55543 2455678899654
No 102
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.1e-39 Score=328.32 Aligned_cols=249 Identities=22% Similarity=0.270 Sum_probs=196.2
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.++||+|+||.||++++..+++.||+|++.+. ....+..|+.++..+. ++++..+..+.......++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-NQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCEEEEE
Confidence 5799999999999999999999999999999985432 1223667888888876 45566666677788889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+....
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~---~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEeecchheecccCC
Confidence 9998 8899999986666799999999999999999999999999999999999994 77899999999997654322
Q ss_pred CccccccccCCCcccCccccccccccC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
.. ......||+.|+|||++.+ ..++.++|||||||+||||++|+.||.... ..+.+..+.......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~---~~~~~~~i~~~~~~~ 227 (332)
T cd05623 157 TV------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIMNHKERF 227 (332)
T ss_pred cc------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC---HHHHHHHHhCCCccc
Confidence 21 1123579999999999873 457899999999999999999999997643 344455554433222
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCC--CCCHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYL 268 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l 268 (473)
..+.....+++++.++|.+|+..+++. |++++++
T Consensus 228 ~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~ 263 (332)
T cd05623 228 QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDF 263 (332)
T ss_pred cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHH
Confidence 222333567899999999999765444 5675555
No 103
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-39 Score=334.72 Aligned_cols=254 Identities=21% Similarity=0.247 Sum_probs=193.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
..|++++.||+|+||+||+|++..+++.||||++.+.. ...+..|+.+++.++|+ +|..+..+..+....++|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~-~iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYFV 79 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCC-CeeeeEEEEecCCEEEEE
Confidence 36999999999999999999999999999999864422 23477899999999855 555555666778889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||||+ ..+.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 80 MDYIPGGDMMSLLIR-MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred EecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCEEEeeCcCCccccccc
Confidence 9999 8899999874 45699999999999999999999999999999999999994 67899999999986542111
Q ss_pred Ccccc----------------------------------------ccccCCCcccCccccccccccCCCCCchhhHHHHH
Q 011988 160 THQHI----------------------------------------PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLG 199 (473)
Q Consensus 160 ~~~~~----------------------------------------p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlG 199 (473)
..... ........+||..|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 00000 00011346799999999999998999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHh--cCCCCCCCCHHHHH
Q 011988 200 YVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCR--SLRFDDKPDYAYLK 269 (473)
Q Consensus 200 viL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl--~~dp~~RPt~~~l~ 269 (473)
|+||||++|..||..... ......+.........+ ....+++++.++|.+|+ ..++..||++++|+
T Consensus 236 ~il~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~~-~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 236 VILFEMLVGQPPFLAPTP---TETQLKVINWENTLHIP-PQVKLSPEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred hHHHHHHhCCCCCcCCCH---HHHHHHHHccccccCCC-CCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 999999999999976443 22222222111101010 01246899999999955 45555699987774
No 104
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.3e-40 Score=335.20 Aligned_cols=257 Identities=19% Similarity=0.256 Sum_probs=197.2
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeC----CeEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEG----DYNV 78 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~----~~~~ 78 (473)
+|++.++||+|+||.||+|.+..+++.||||.+... ....+.+|+.+++.++|.+++..+..+.... ...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 488999999999999999999999999999985432 1245778999999999777666655443322 2679
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 79 lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
++|||++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 81 lv~e~~~~~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQSDLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN---SNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccccCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC---CCCCEEeccccceeecccC
Confidence 999999999998886 345799999999999999999999999999999999999994 7789999999999865432
Q ss_pred CCccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-------
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK------- 230 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~------- 230 (473)
... ......+|..|+|||++.+.. ++.++|||||||++|||++|+.||.+.........+......
T Consensus 157 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 157 ESK------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred ccc------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 211 112346789999999998754 799999999999999999999999875433222222111100
Q ss_pred -------------c-ccccHH---HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 231 -------------K-VSTSIE---ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 231 -------------~-~~~~~~---~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
. ...... .+...+++++.+||..||..||++||++.++ |.+.|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~---l~hp~~ 291 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADA---LAHPYL 291 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHH---hcCHhh
Confidence 0 000111 1223457899999999999999999998776 555543
No 105
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=9.8e-40 Score=326.63 Aligned_cols=235 Identities=23% Similarity=0.285 Sum_probs=191.1
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|++..+++.||||++... .......|..++..+.+|++|..+..+....+..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4799999999999999999999999985432 23345678888877656777777777778888999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. ...+++.++..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~----- 151 (316)
T cd05619 81 GDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMCKENMLGDA----- 151 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcceECCCCCC-----
Confidence 899999874 34689999999999999999999999999999999999994 678999999999975432211
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
......||..|+|||++.+..++.++|||||||++|||++|..||.+... .+.+..+..... .+...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~i~~~~~-----~~~~~~~~ 221 (316)
T cd05619 152 --KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---EELFQSIRMDNP-----CYPRWLTR 221 (316)
T ss_pred --ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCC-----CCCccCCH
Confidence 12345799999999999999999999999999999999999999977432 333333322211 12235678
Q ss_pred HHHHHHHHHhcCCCCCCCCHH
Q 011988 246 EFASYFHYCRSLRFDDKPDYA 266 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~~ 266 (473)
++.++|.+||..||++||++.
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~ 242 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVK 242 (316)
T ss_pred HHHHHHHHHhccCHhhcCCCh
Confidence 999999999999999999975
No 106
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=320.40 Aligned_cols=242 Identities=21% Similarity=0.200 Sum_probs=194.5
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeE---eCCeEEEEEec
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGV---EGDYNVLVIDL 83 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~---~~~~~~lv~e~ 83 (473)
..||+|++|.||+|.+ +|+.||||++.... ...+.+|+.+++.++|++++..+..+.. .....+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6789999999999986 78999999854432 2446699999999997755555544332 13567999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 84 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
+ +++|.+++.. .+.+++...+.++.|++.||.|||+ .+++||||||+|||++ +++.+||+|||+++......
T Consensus 104 ~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~---~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 104 CTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT---ENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC---CCCcEEEcccchHhhhcccc--
Confidence 9 7899999974 4578999999999999999999998 4999999999999994 67899999999998654322
Q ss_pred cccccccCCCcccCccccccccccC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+.. ..+.+..+........ +
T Consensus 178 --------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~---~~~~~~~i~~~~~~~~---~ 243 (283)
T PHA02988 178 --------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT---TKEIYDLIINKNNSLK---L 243 (283)
T ss_pred --------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHhcCCCCC---C
Confidence 23468899999999976 678999999999999999999999998753 2333344332222211 2
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
...+|+++.+++.+||+.||++||++.+|++.|+.+.
T Consensus 244 ~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 244 PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 2357899999999999999999999999999998764
No 107
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.7e-40 Score=331.73 Aligned_cols=237 Identities=20% Similarity=0.278 Sum_probs=189.9
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.+..+++.||+|++.+. ....+..|+++++.+.|+ +|..+..+.......++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp-~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC-CCCceEEEEEcCCEEEEEEeCCCC
Confidence 4799999999999999999999999985432 223456788888888755 5555566667778899999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
++|.+++.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++ .++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~---~~~~~kL~Dfg~~~~~~~~~~---- 151 (325)
T cd05594 80 GELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGA---- 151 (325)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC---CCCCEEEecCCCCeecCCCCc----
Confidence 899888763 4579999999999999999999997 8999999999999994 778999999999975432221
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCc
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 244 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 244 (473)
......||..|+|||++.+..++.++|||||||+||||++|..||.+... ......+..... .+...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---~~~~~~i~~~~~-----~~p~~~~ 220 (325)
T cd05594 152 ---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEI-----RFPRTLS 220 (325)
T ss_pred ---ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH---HHHHHHHhcCCC-----CCCCCCC
Confidence 11345799999999999999999999999999999999999999976432 222333322221 1235678
Q ss_pred HHHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011988 245 TEFASYFHYCRSLRFDDKP-----DYAYLK 269 (473)
Q Consensus 245 ~~l~~li~~cl~~dp~~RP-----t~~~l~ 269 (473)
+++.++|..||..||++|+ ++.+++
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il 250 (325)
T cd05594 221 PEAKSLLSGLLKKDPKQRLGGGPDDAKEIM 250 (325)
T ss_pred HHHHHHHHHHhhcCHHHhCCCCCCCHHHHh
Confidence 9999999999999999997 766653
No 108
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.7e-40 Score=327.16 Aligned_cols=234 Identities=21% Similarity=0.264 Sum_probs=193.2
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.+..+++.||||++.+. ....+..|..+++.+.+|++|..+..+....+..++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999999999999999985432 23346678888888877778888877778888999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~----- 151 (318)
T cd05570 81 GDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD---SEGHIKIADFGMCKEGILGGV----- 151 (318)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC---CCCcEEecccCCCeecCcCCC-----
Confidence 899988874 44799999999999999999999999999999999999994 778999999999975322211
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
......||..|+|||++.+..++.++|||||||++|||++|+.||.+.. ....+..+...... +...++.
T Consensus 152 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~---~~~~~~~i~~~~~~-----~~~~~~~ 221 (318)
T cd05570 152 --TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD---EDELFQSILEDEVR-----YPRWLSK 221 (318)
T ss_pred --cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC---HHHHHHHHHcCCCC-----CCCcCCH
Confidence 1134579999999999999999999999999999999999999997643 23333333332221 2346789
Q ss_pred HHHHHHHHHhcCCCCCCCCH
Q 011988 246 EFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~ 265 (473)
++.++|..||..||++||++
T Consensus 222 ~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred HHHHHHHHHccCCHHHcCCC
Confidence 99999999999999999998
No 109
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-39 Score=322.34 Aligned_cols=288 Identities=43% Similarity=0.704 Sum_probs=241.9
Q ss_pred ccCC-ceEEEeeEeecCceEEEEEEEcCCC-cEEEEEEcccC---CchhHHHHHHHHHHhc---CCCCCCeeEEee-EeC
Q 011988 4 RVGN-KFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIKLNVKT---KHPQLQYEAKLYKILQ---GGTGIPNLRWFG-VEG 74 (473)
Q Consensus 4 ~i~~-~y~i~~~LG~G~fG~Vy~a~~~~~~-~~vAiK~~~~~---~~~~l~~E~~il~~L~---~~~~i~~~~~~~-~~~ 74 (473)
.... +|++.++||+|+||.||+|.+..++ ..+|+|+.... ....+..|..++..+. +..+++.+...+ ...
T Consensus 14 ~~~~~~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~ 93 (322)
T KOG1164|consen 14 DKVNTRYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE 93 (322)
T ss_pred cccccceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCC
Confidence 3445 8999999999999999999987774 68999984432 2336899999999998 467899999899 588
Q ss_pred CeEEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCC--CCCcEEEEecCC
Q 011988 75 DYNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGL 151 (473)
Q Consensus 75 ~~~~lv~e~~g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~--~~~~vkL~DFGl 151 (473)
.+.+|||+++|.+|.++..... +.|+..+++.|+.|++.+|++||+.|+|||||||+|++++... ....++|+|||+
T Consensus 94 ~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 94 DFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred ceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 8999999999999999996554 7899999999999999999999999999999999999998543 226799999999
Q ss_pred cc--cccCCCCcccccccc-CCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh
Q 011988 152 AK--RYRDTATHQHIPYRE-NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 228 (473)
Q Consensus 152 a~--~~~~~~~~~~~p~~~-~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~ 228 (473)
|+ .+.......+.+.+. ...+.||.+|++++++.+.+.++++|+|||++++.||+.|.+||.+.........+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 99 444433322344444 356779999999999999999999999999999999999999998877666666665555
Q ss_pred hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCccccccccc
Q 011988 229 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKY 294 (473)
Q Consensus 229 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~ 294 (473)
....... ++...|.++..++..+-..++.++|++..+..+|++.+.+.+...+.++||+....
T Consensus 254 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~~~~ 316 (322)
T KOG1164|consen 254 RKLLTDR---FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEVKLR 316 (322)
T ss_pred hhhcccc---ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCccccccc
Confidence 4444332 44557889999999999999999999999999999999999999999999998643
No 110
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-42 Score=314.01 Aligned_cols=260 Identities=21% Similarity=0.272 Sum_probs=214.3
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcc-----cCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNV-----KTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~-----~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
..+.+.|.+.+.||+|.|+.||++.+..+|+.+|+|++. ....+.+.+|++|.+.|+|++++ .+........+.
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~Iv-rL~~ti~~~~~~ 85 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV-RLHDSIQEESFH 85 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEe-ehhhhhccccee
Confidence 357789999999999999999999999999999999733 33466799999999999965554 444445566788
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+||+|++ |++|..-+-. ..-+++..+-.++.||+++|.|+|.+||||||+||+|+|+...+..--+||+|||+|..+.
T Consensus 86 ylvFe~m~G~dl~~eIV~-R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EEEEecccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 9999999 7777554432 2458899999999999999999999999999999999999877777789999999999877
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
+.. ....+.||+.|||||++...+|+..+|||+.|||||-|+.|.+||.+. +....|+.|.......+.
T Consensus 165 ~g~--------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~---~~~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 165 DGE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE---DQHRLYEQIKAGAYDYPS 233 (355)
T ss_pred Ccc--------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc---cHHHHHHHHhccccCCCC
Confidence 322 135679999999999999999999999999999999999999999883 445667777766654433
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
+ .++.+.++.++|+++||..||.+|.|+.|. |++.|+++
T Consensus 234 ~-~w~~is~~Ak~LvrrML~~dP~kRIta~EA---L~HpWi~~ 272 (355)
T KOG0033|consen 234 P-EWDTVTPEAKSLIRRMLTVNPKKRITADEA---LKHPWICN 272 (355)
T ss_pred c-ccCcCCHHHHHHHHHHhccChhhhccHHHH---hCCchhcc
Confidence 2 346788999999999999999999997665 55555443
No 111
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.8e-40 Score=330.34 Aligned_cols=266 Identities=21% Similarity=0.275 Sum_probs=202.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||+|+||.||++++..+++.||||++.+. ....+..|..++..+. +++|..+..+....+..++|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999985432 1223667788887776 56667777777888899999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ |++|.+++......+++..+..++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+++.+....
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCCEEEEeccceeeccCCC
Confidence 9998 8999999986666899999999999999999999999999999999999994 77889999999998765432
Q ss_pred CccccccccCCCcccCccccccccccC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
.. ......||+.|+|||++.+ ..++.++|||||||+||||++|+.||.... ..+.+..+.......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~---~~~~~~~i~~~~~~~ 227 (331)
T cd05624 157 TV------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIMNHEERF 227 (331)
T ss_pred ce------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC---HHHHHHHHHcCCCcc
Confidence 21 1123579999999999876 457899999999999999999999997643 233444443322211
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccccccc
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILK 293 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 293 (473)
..+.....+++++.++|.+||..++ +|+....+.+++.+.+ ....+|+...
T Consensus 228 ~~p~~~~~~~~~~~~li~~ll~~~~-~~~~~~~~~~~~~h~~-------f~~~~~~~~~ 278 (331)
T cd05624 228 QFPSHITDVSEEAKDLIQRLICSRE-RRLGQNGIEDFKKHAF-------FEGIDWENIR 278 (331)
T ss_pred cCCCccccCCHHHHHHHHHHccCch-hhcCCCCHHHHhcCCC-------cCCCCHHHHh
Confidence 1222234578999999999998655 4443222333343333 2346677653
No 112
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.3e-40 Score=334.29 Aligned_cols=270 Identities=19% Similarity=0.268 Sum_probs=204.4
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++++.||+|+||.||+|.+..+++.||||++... ....+..|+.++..++|+++ ..+..........++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-v~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWV-VKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCE-eeEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999985432 23457789999999986554 4555556677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ |++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||||+ ..+.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~---~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 80 MEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD---AKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred EeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEEEeeccCCccccccc
Confidence 9999 8899999874 45699999999999999999999999999999999999994 78899999999997653221
Q ss_pred Cccc----------------------------cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCC
Q 011988 160 THQH----------------------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 211 (473)
Q Consensus 160 ~~~~----------------------------~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~P 211 (473)
.... .........+||+.|+|||++.+..++.++|||||||+||||++|..|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 1000 000011245799999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccccc
Q 011988 212 WQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTI 291 (473)
Q Consensus 212 f~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~ 291 (473)
|.+... ...+.++.........+. ...+++++.++|.+|+ .||.+|++...+.+++.+. +-..++|..
T Consensus 236 f~~~~~---~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp-------~f~~~~~~~ 303 (360)
T cd05627 236 FCSETP---QETYRKVMNWKETLVFPP-EVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHP-------FFEGVDWGH 303 (360)
T ss_pred CCCCCH---HHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCC-------CCCCCCHHH
Confidence 987443 333333332111111110 1136789999999977 5999999755455555543 334568887
Q ss_pred cc
Q 011988 292 LK 293 (473)
Q Consensus 292 ~~ 293 (473)
..
T Consensus 304 ~~ 305 (360)
T cd05627 304 IR 305 (360)
T ss_pred Hh
Confidence 64
No 113
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6e-40 Score=336.54 Aligned_cols=258 Identities=22% Similarity=0.255 Sum_probs=194.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
.+|+++++||+|+||.||+|++..+++.||||++.+.. ...+..|+.+++.+.|++ |..+..++......++|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~-iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW-VVRLYYSFQDKDNLYFV 79 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCc-CCeEEEEEEeCCEEEEE
Confidence 36999999999999999999999999999999864422 335778999999998655 55555556677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+|+.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~---~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 80 MDYIPGGDMMSLLIR-MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEeECCCCccccccc
Confidence 9999 7899999874 35689999999999999999999999999999999999994 78899999999986432110
Q ss_pred Cccc----------------------------------------cccccCCCcccCccccccccccCCCCCchhhHHHHH
Q 011988 160 THQH----------------------------------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLG 199 (473)
Q Consensus 160 ~~~~----------------------------------------~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlG 199 (473)
.... .........+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0000 000011245799999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 200 YVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 200 viL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
|+||||++|+.||.+... .+....+.........+ ....+++++.++|.+|+ .+|.+|++...+.+++++
T Consensus 236 vil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p-~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 236 VILYEMLVGQPPFLAQTP---LETQMKVINWQTSLHIP-PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHHHHhCCCCCCCCCH---HHHHHHHHccCCCcCCC-CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 999999999999987432 22222222211111111 11356789999998876 599999983323333444
No 114
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.3e-41 Score=323.82 Aligned_cols=244 Identities=23% Similarity=0.344 Sum_probs=207.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc------hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~------~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
+..+|++.+.||.|.||.|-+|.....|+.||||.+.+.+. -.+.+|++||..|+|+++|.. +.++...+..+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~I-yEVFENkdKIv 129 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQI-YEVFENKDKIV 129 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeeh-hhhhcCCceEE
Confidence 45689999999999999999999989999999998655443 237899999999997666654 45566777889
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
|||||. +|.|+|++..+ +.+++.++..|+.||+.|+.|+|.++++|||||.+|||+ |.++.+||+|||++..|.+
T Consensus 130 ivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhcc
Confidence 999999 99999999865 469999999999999999999999999999999999999 5889999999999998876
Q ss_pred CCCccccccccCCCcccCccccccccccCCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~-s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
... ..+|+|++.|++||+..|.+| ++.+|-|||||+||-|+.|.+||++. +.+..+..|.......
T Consensus 206 ~kf--------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~---Dhk~lvrQIs~GaYrE-- 272 (668)
T KOG0611|consen 206 KKF--------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR---DHKRLVRQISRGAYRE-- 272 (668)
T ss_pred ccH--------HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc---hHHHHHHHhhcccccC--
Confidence 543 257899999999999999998 79999999999999999999999984 4455555555444322
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
+.-|....-||+.||..||+.|.|+++|..
T Consensus 273 ----P~~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 273 ----PETPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred ----CCCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 344778899999999999999999777743
No 115
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-40 Score=328.45 Aligned_cols=249 Identities=20% Similarity=0.283 Sum_probs=212.6
Q ss_pred CCccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCch-----hHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP-----QLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 2 ~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~-----~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
|..|.+=|.+.+.||+|.|..|-+|++.-+|+.||||++.+++.. .+..|++.|+.++|+|+|. ++.+-.....
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVR-LYEViDTQTK 91 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVR-LYEVIDTQTK 91 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeee-eeehhcccce
Confidence 456788899999999999999999999999999999998887654 4789999999999666554 4445556677
Q ss_pred EEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 77 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
.|+++|+- +|+|.|+|-.+...+.+..+.+++.||+.|+.|+|...+|||||||+||.+- .+-|.|||.|||++..+
T Consensus 92 lyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNKF 169 (864)
T ss_pred EEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeeccccccC
Confidence 89999998 7899999988888899999999999999999999999999999999999886 57899999999999877
Q ss_pred cCCCCccccccccCCCcccCccccccccccCCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS-RRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s-~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
.... ...+++|+..|-|||+++|..|+ +++||||||||||.|++|+.||+..++. +.+-.|...+...
T Consensus 170 ~PG~--------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS---ETLTmImDCKYtv 238 (864)
T KOG4717|consen 170 QPGK--------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS---ETLTMIMDCKYTV 238 (864)
T ss_pred CCcc--------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch---hhhhhhhcccccC
Confidence 5432 34678999999999999999985 7899999999999999999999986553 3444555544432
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
+..++.+.++||..||..||.+|.+.++|.
T Consensus 239 -----PshvS~eCrdLI~sMLvRdPkkRAslEeI~ 268 (864)
T KOG4717|consen 239 -----PSHVSKECRDLIQSMLVRDPKKRASLEEIV 268 (864)
T ss_pred -----chhhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence 345678999999999999999999988774
No 116
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.6e-39 Score=318.11 Aligned_cols=256 Identities=20% Similarity=0.319 Sum_probs=199.7
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 75 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~ 75 (473)
-.++|.+.+.||+|+||.||+|.+.. ++..|++|...... ...+..|+.+++.++|. +|..+..++.+..
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQ-NIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCC-CEeeEEEEEccCC
Confidence 35789999999999999999999876 67889999854332 23478899999999865 4445555556667
Q ss_pred eEEEEEecC-CCCHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEe
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCS------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 148 (473)
..+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||+++++||||||+|||++.......+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 789999999 889999987543 2489999999999999999999999999999999999997443455799999
Q ss_pred cCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHH
Q 011988 149 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 149 FGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i 227 (473)
||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |..||.+... ......+
T Consensus 163 fg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~---~~~~~~~ 234 (277)
T cd05036 163 FGMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN---QEVMEFV 234 (277)
T ss_pred CccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHH
Confidence 9999876332210 11122234568999999999899999999999999999997 9999986433 2222222
Q ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 228 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
..... ......+|.++.+++..||+.+|++||++.+|++.|+
T Consensus 235 ~~~~~----~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TGGGR----LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HcCCc----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 22111 1123567899999999999999999999999988775
No 117
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.2e-39 Score=319.51 Aligned_cols=256 Identities=20% Similarity=0.282 Sum_probs=202.8
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCc--EEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE--EVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~--~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||.|+||.||+|.+..++. .+++|...... ...+..|+.++.++.+|+++..+..+.......+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 579999999999999999999877765 46888754322 235778999999996667777777777777888999
Q ss_pred EecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcE
Q 011988 81 IDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 144 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~v 144 (473)
|||+ +++|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||++ .++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---ENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---CCCeE
Confidence 9998 789999986432 2488999999999999999999999999999999999994 67889
Q ss_pred EEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHH
Q 011988 145 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQK 223 (473)
Q Consensus 145 kL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~ 223 (473)
||+|||++........ ......+..|+|||++.+..++.++|||||||++|||++ |..||.+... ...
T Consensus 159 kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---~~~ 227 (297)
T cd05089 159 KIADFGLSRGEEVYVK--------KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---AEL 227 (297)
T ss_pred EECCcCCCccccceec--------cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHH
Confidence 9999999864321110 111233567999999999889999999999999999997 9999977543 222
Q ss_pred HHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 224 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 224 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
...+..... ......++.++.+|+.+||..+|.+||+++++.+.|..++.+..
T Consensus 228 ~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 228 YEKLPQGYR----MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred HHHHhcCCC----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 333322111 11234578999999999999999999999999999999887654
No 118
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-39 Score=341.61 Aligned_cols=248 Identities=18% Similarity=0.193 Sum_probs=199.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCC-CcEEEEEEcccCCc---hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQT-NEEVAIKLNVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~~~vAiK~~~~~~~---~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
..|.+.+.||.|+||.||+|.+..+ ++.||+|....... ..+..|+.+++.++|++++ .+..++...+..+||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv-~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIV-KHFDDFKSDDKLLLIME 145 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEe-EEEEEEEECCEEEEEEE
Confidence 3499999999999999999998877 78899997433332 3467799999999865544 55556677788999999
Q ss_pred cC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 83 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 83 ~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|+ +++|.+++... ...+++.++..++.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++.+...
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCcEEEEeCcCceecCCc
Confidence 99 88999887532 34689999999999999999999999999999999999994 7789999999999876543
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
... ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+...... .
T Consensus 223 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~---~~~~~~~~~~~~~~----~ 290 (478)
T PTZ00267 223 VSL-----DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS---QREIMQQVLYGKYD----P 290 (478)
T ss_pred ccc-----ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCCC----C
Confidence 211 11245679999999999999999999999999999999999999997643 23333333332221 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
+...++.++.++|..||..||++||++.+++.
T Consensus 291 ~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 23457899999999999999999999988753
No 119
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.1e-40 Score=329.34 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=200.1
Q ss_pred EeeEeecCceEEEEEEEc---CCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 12 GRKIGSGSFGEIYLGTNI---QTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~---~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
++.||+|+||.||++++. .+++.||||++.+. ....+..|+++++.++|++++. +..+.......++||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVK-LHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCccc-EEEEEEcCCEEEEEEcC
Confidence 367999999999999863 57899999985432 2234677999999998655554 55556677888999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 84 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
+ +++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 80 ~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~~~~~~-- 153 (318)
T cd05582 80 LRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESIDHEK-- 153 (318)
T ss_pred CCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEEeeccCCcccCCCCC--
Confidence 9 7899998864 45699999999999999999999999999999999999994 678999999999986543321
Q ss_pred ccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 242 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 242 (473)
......||..|+|||++.+..++.++|||||||++|||++|+.||.+.. ..+.+..+...... +...
T Consensus 154 -----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~---~~~~~~~i~~~~~~-----~p~~ 220 (318)
T cd05582 154 -----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD---RKETMTMILKAKLG-----MPQF 220 (318)
T ss_pred -----ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC---HHHHHHHHHcCCCC-----CCCC
Confidence 1234579999999999999889999999999999999999999997643 33344444332221 2345
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHH--HHHHHHHHHHHhCCCCCCcccccccc
Q 011988 243 YPTEFASYFHYCRSLRFDDKPDYAY--LKRLFRDLFIREGFQFDYVFDWTILK 293 (473)
Q Consensus 243 ~p~~l~~li~~cl~~dp~~RPt~~~--l~~~L~~l~~~~~~~~~~~~dw~~~~ 293 (473)
+++++.++|..||+.||++||++.+ +.+++.+.+ ...++|....
T Consensus 221 ~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~-------~~~~~~~~~~ 266 (318)
T cd05582 221 LSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPF-------FSTIDWNKLY 266 (318)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCC-------cCCCCHHHHH
Confidence 7899999999999999999999776 555554433 2335676543
No 120
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-41 Score=336.40 Aligned_cols=238 Identities=19% Similarity=0.332 Sum_probs=196.7
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCCHH
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSLE 89 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~ 89 (473)
-++.||+|+-|.||+|+ -.++.||||.+.. .-+.+++-|++|+|.|+|. +..++.....+||+|||| .|-|.
T Consensus 128 ELeWlGSGaQGAVF~Gr--l~netVAVKKV~e----lkETdIKHLRkLkH~NII~-FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGR--LHNETVAVKKVRE----LKETDIKHLRKLKHPNIIT-FKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhhccCcccceeeee--ccCceehhHHHhh----hhhhhHHHHHhccCcceee-EeeeecCCceeEEeeeccccccHH
Confidence 36789999999999998 4688999996322 2345788899999776665 455667777889999999 88999
Q ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccC
Q 011988 90 DLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYREN 169 (473)
Q Consensus 90 ~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~ 169 (473)
++++ ..+++.......|..+|+.|+.|||.+.|||||||.-||||+ .+..|||+|||.++...+..+.
T Consensus 201 ~VLk-a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STk-------- 268 (904)
T KOG4721|consen 201 EVLK-AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTK-------- 268 (904)
T ss_pred HHHh-ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhhh--------
Confidence 9998 466899999999999999999999999999999999999996 6778999999999988776543
Q ss_pred CCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHH
Q 011988 170 KNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFAS 249 (473)
Q Consensus 170 ~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ 249 (473)
-.|.||..|||||++.+.+.+.|+|||||||||||||||..||.+.... ..+..+....+.-+ .+..||+.|+-
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss---AIIwGVGsNsL~Lp---vPstcP~Gfkl 342 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS---AIIWGVGSNSLHLP---VPSTCPDGFKL 342 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh---eeEEeccCCccccc---CcccCchHHHH
Confidence 3679999999999999999999999999999999999999999775431 11112222222221 23578999999
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 250 YFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 250 li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
||++||+-.|..||+|.+|+..|+
T Consensus 343 L~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 343 LLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred HHHHHHhcCCCCCccHHHHHHHHh
Confidence 999999999999999999877663
No 121
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.1e-39 Score=313.64 Aligned_cols=253 Identities=22% Similarity=0.356 Sum_probs=200.2
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
..++|++.++||+|+||.||+|.+..+ ..||||+..... ...+..|+.+++.++|.+++..+. +. .....+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~-~~-~~~~~~lv~e 80 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VV-SEEPIYIVTE 80 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEE-EE-CCCCcEEEEE
Confidence 357899999999999999999988655 469999865432 346889999999998666555443 33 3455789999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++ +++.++|+|||+++.+.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCceeecccccc
Confidence 99 67999999743 34589999999999999999999999999999999999995 678899999999976643321
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. ......++..|+|||+..+..++.++|||||||++|||++ |..||.+... .+.+..+..... . ..
T Consensus 158 ~------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~---~~~~~~~~~~~~-~---~~ 224 (262)
T cd05071 158 T------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVLDQVERGYR-M---PC 224 (262)
T ss_pred c------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh---HHHHHHHhcCCC-C---CC
Confidence 1 1123456778999999998889999999999999999999 8899976432 233333322111 1 11
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
...+|..+.+++..||+.||++||++.++.+.|++.|
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 225 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 2457899999999999999999999999999999875
No 122
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.7e-39 Score=317.50 Aligned_cols=257 Identities=24% Similarity=0.339 Sum_probs=205.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEc-----CCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
.++|.+.+.||.|+||.||++.+. .++..||+|.+.... ...+..|+.+++.++| +++..+..++......
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~ 82 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH-EHIVKFYGVCVEGDPL 82 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCC-CCcceEEEEEecCCcc
Confidence 467999999999999999999853 345678999865433 3357889999999986 4555666667778889
Q ss_pred EEEEecC-CCCHHHHHHHcC------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcE
Q 011988 78 VLVIDLL-GPSLEDLFNFCS------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 144 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~v 144 (473)
+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ +.+.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~---~~~~~ 159 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLV 159 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---cCCcE
Confidence 9999999 789999987432 2489999999999999999999999999999999999994 77899
Q ss_pred EEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHH
Q 011988 145 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQK 223 (473)
Q Consensus 145 kL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~ 223 (473)
||+|||+++........ .......++..|+|||++.+..++.++|||||||++|+|++ |..||..... ...
T Consensus 160 kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---~~~ 231 (288)
T cd05093 160 KIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEV 231 (288)
T ss_pred EeccCCccccccCCcee-----ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHH
Confidence 99999999865432211 11123456788999999999889999999999999999998 9999976543 223
Q ss_pred HHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 224 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 224 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
+..+...... .....++.++.+++.+||+.||.+||++.++.+.|+++...
T Consensus 232 ~~~i~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 232 IECITQGRVL----QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHcCCcC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 3333332221 12346789999999999999999999999999999998754
No 123
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.8e-39 Score=325.51 Aligned_cols=237 Identities=20% Similarity=0.281 Sum_probs=189.3
Q ss_pred EeeEeecCceEEEEEEEc---CCCcEEEEEEcccC-------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 12 GRKIGSGSFGEIYLGTNI---QTNEEVAIKLNVKT-------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~---~~~~~vAiK~~~~~-------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+++||+|+||.||++++. .+++.||||++.+. ....+..|+.+++.++|++++..+ .++..+...+++|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~-~~~~~~~~~~lv~ 79 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLI-YAFQTGGKLYLIL 79 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhcee-eEEecCCeEEEEE
Confidence 368999999999999864 46889999985432 123467899999999966655544 4556677889999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|.+++.. ...+.+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 80 EYLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred eCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCC
Confidence 999 7899998874 4568899999999999999999999999999999999999 4778999999999975433221
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......||..|+|||++.+..++.++|||||||+||||++|+.||.+.. ....+..+..... .+.
T Consensus 156 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~---~~~~~~~~~~~~~-----~~~ 220 (323)
T cd05584 156 -------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN---RKKTIDKILKGKL-----NLP 220 (323)
T ss_pred -------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC---HHHHHHHHHcCCC-----CCC
Confidence 1134579999999999999889999999999999999999999997743 2333344333222 223
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCC-----CHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKP-----DYAYL 268 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RP-----t~~~l 268 (473)
..+++++.++|..||..||++|| +++++
T Consensus 221 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l 253 (323)
T cd05584 221 PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEV 253 (323)
T ss_pred CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHH
Confidence 56789999999999999999999 65555
No 124
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.7e-39 Score=318.77 Aligned_cols=254 Identities=19% Similarity=0.243 Sum_probs=198.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.++|.+.++||.|+||.||+|.+..+++.||+|.+.... ...+..|+.+++.|+|++++ .+..+.......+++|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~-~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIIHTEKSLTLVF 83 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcc-eEEEEEecCCeEEEEE
Confidence 467999999999999999999999999999999854322 23567899999999865555 5555566778899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||+.++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||++........
T Consensus 84 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~~~~- 159 (301)
T cd07873 84 EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPTK- 159 (301)
T ss_pred eccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCcEEECcCcchhccCCCCC-
Confidence 9999999999886667799999999999999999999999999999999999994 678999999999975433221
Q ss_pred cccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc--------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 232 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 232 (473)
......++..|+|||++.+. .++.++|||||||++|||++|+.||...........+..+.....
T Consensus 160 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 160 ------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred ------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhh
Confidence 11234678999999998764 478999999999999999999999987543211111111110000
Q ss_pred --------------cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 233 --------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 233 --------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..........+++++.+||.+||..||.+||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00112223457889999999999999999999887743
No 125
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-40 Score=349.35 Aligned_cols=257 Identities=24% Similarity=0.347 Sum_probs=213.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
.+.++.+.||+|.||+||+|+... ....||||.++.... .+|++|++++..|+| ++|+.+.+.+.+++..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H-~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQH-PNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccC-CCeEEEEEEEccCCee
Confidence 456788999999999999998543 335799998655443 469999999999995 5555666777889999
Q ss_pred EEEEecC-CCCHHHHHHHcCC---------C----CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSR---------K----LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 143 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~---------~----ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~ 143 (473)
++|+||+ .|+|.++|..... . ++..+.+.|+.|||.|++||-++.+|||||-..|+||+ +...
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg---e~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG---ENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec---cceE
Confidence 9999999 8999999975432 2 88899999999999999999999999999999999995 7889
Q ss_pred EEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHH
Q 011988 144 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQ 222 (473)
Q Consensus 144 vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~ 222 (473)
|||+|||+++..-..+. |+-.....-..+||+||.++.++|+.+||||||||+|||+++ |+.||.++.. .+
T Consensus 642 VKIsDfGLsRdiYssDY-----Yk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn---~E 713 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDY-----YKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN---QE 713 (774)
T ss_pred EEecccccchhhhhhhh-----hcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch---HH
Confidence 99999999987655443 222223344689999999999999999999999999999998 9999999755 45
Q ss_pred HHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 223 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 223 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
.++.+..... -..+++||.++++||..||+.+|.+||+|.+|...|++.....
T Consensus 714 VIe~i~~g~l----L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 714 VIECIRAGQL----LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred HHHHHHcCCc----ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 5555555444 2345789999999999999999999999999999999887543
No 126
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.3e-39 Score=324.34 Aligned_cols=241 Identities=22% Similarity=0.265 Sum_probs=188.5
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHH-HHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAK-LYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~-il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
+.||+|+||.||+|++..+++.||||++.+.. ...+..|.. +++.+.|+ +|..+..++...+..++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~-~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHP-FLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCC-CccceeeEEEcCCEEEEEEcCCC
Confidence 47999999999999999999999999854321 223445544 46667655 4555556667788899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
+++|...+.. ...+++..+..++.||+.||.|||++||+||||||+||||+ .++.+||+|||+++.......
T Consensus 80 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~~---- 151 (321)
T cd05603 80 GGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGVEPEE---- 151 (321)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEccCCCCccCCCCCC----
Confidence 7899888763 45689999999999999999999999999999999999994 778999999999875432221
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCc
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 244 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 244 (473)
......||..|+|||++.+..++.++|||||||++|||++|..||.+.. ..+.+..+..... .+....+
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~i~~~~~-----~~~~~~~ 220 (321)
T cd05603 152 ---TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---VSQMYDNILHKPL-----QLPGGKT 220 (321)
T ss_pred ---ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC---HHHHHHHHhcCCC-----CCCCCCC
Confidence 1234579999999999999899999999999999999999999997743 3344444443322 1234567
Q ss_pred HHHHHHHHHHhcCCCCCCCCHH-HHHHHHH
Q 011988 245 TEFASYFHYCRSLRFDDKPDYA-YLKRLFR 273 (473)
Q Consensus 245 ~~l~~li~~cl~~dp~~RPt~~-~l~~~L~ 273 (473)
.++.++|..||+.||.+||+.. ++.+.++
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~ 250 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAKADFLEIKN 250 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCCCCHHHHhC
Confidence 8999999999999999999853 3333333
No 127
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4e-39 Score=320.29 Aligned_cols=260 Identities=19% Similarity=0.305 Sum_probs=205.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcC-------CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-------TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-------~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~ 74 (473)
.++|.+.+.||+|+||.||+|.+.. +...||+|+..... ...+..|+.+++.+..|+++..+..++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3789999999999999999998643 23569999865432 234778999999996567777777777778
Q ss_pred CeEEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeC
Q 011988 75 DYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 138 (473)
Q Consensus 75 ~~~~lv~e~~-g~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~ 138 (473)
...+++|||+ +++|.+++.... ..+++.+++.++.||+.||+|||++||+||||||+|||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~-- 174 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-- 174 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc--
Confidence 8899999999 779999997532 2488899999999999999999999999999999999994
Q ss_pred CCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCC
Q 011988 139 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA 217 (473)
Q Consensus 139 ~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~ 217 (473)
.++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 175 -~~~~~kL~dfg~a~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 175 -EDNVMKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred -CCCcEEECCCcccccccccchhh-----ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 67899999999997654322111 0112234578999999999889999999999999999998 8999976432
Q ss_pred CCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 218 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 218 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
.+....+..... ......++.++.+++..||..+|++||++.+|++.|++++...+
T Consensus 249 ---~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 249 ---EELFKLLKEGHR----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred ---HHHHHHHHcCCC----CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 222222222211 12234678999999999999999999999999999999987654
No 128
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.4e-39 Score=322.22 Aligned_cols=256 Identities=21% Similarity=0.277 Sum_probs=199.6
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcE----EEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEE----VAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~----vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
-..+|++.+.||+|+||.||+|.+..+++. ||||+..... ...+..|+.+++.+.|.+++..+. ++... .
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g-~~~~~-~ 82 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLTS-T 82 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEE-EEcCC-C
Confidence 356799999999999999999998766654 8999854332 245778999999998776666554 44443 3
Q ss_pred EEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 77 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
.+++++|+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.+
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---TPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---CCCcEEEccccccccc
Confidence 45777776 8899999986666789999999999999999999999999999999999994 6788999999999876
Q ss_pred cCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
....... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+.... + +..+.......
T Consensus 160 ~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---~-~~~~~~~~~~~ 230 (316)
T cd05108 160 GADEKEY-----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---E-ISSILEKGERL 230 (316)
T ss_pred cCCCcce-----eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---H-HHHHHhCCCCC
Confidence 5432211 0122344678999999999999999999999999999997 99999774321 2 22222222111
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
. ....++.++.+++..||..+|++||++.+|...|..+..
T Consensus 231 ~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 231 P---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred C---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 1 124567899999999999999999999999998887763
No 129
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.4e-39 Score=313.54 Aligned_cols=251 Identities=20% Similarity=0.356 Sum_probs=200.7
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
.++|++.++||+|+||.||+|.+ .++..||+|..... ....+..|+.+++.++|.+++. +..+.......+++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVR-LYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCCcEEEEec
Confidence 46899999999999999999986 45677999985432 2456888999999998665554 45555667778999999
Q ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 84 L-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 84 ~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
+ +++|.+++... ...+++..++.++.||+.||.|||+++++||||||+||+++ ..+.++|+|||++.........
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCcEEECCCccceecCCCcee
Confidence 8 78999998643 45689999999999999999999999999999999999994 7789999999999876543211
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......++..|+|||.+.+..++.++|||||||++|+|++ |..||..... ......+...... ...
T Consensus 160 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~~~~~~~~~----~~~ 226 (261)
T cd05072 160 ------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---SDVMSALQRGYRM----PRM 226 (261)
T ss_pred ------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---HHHHHHHHcCCCC----CCC
Confidence 1123346778999999998889999999999999999998 9999976433 2222322222111 122
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
..+|.++.+++.+||..+|++||+++++.++|++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 227 ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 4578999999999999999999999999999875
No 130
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.7e-39 Score=316.37 Aligned_cols=254 Identities=20% Similarity=0.300 Sum_probs=198.6
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~ 74 (473)
+..++|++.+.||+|+||.||+|.+.. ++..||||+..... ...+..|+.+++.+.|++++ .+..+...+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv-~~~~~~~~~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV-RLLGVVSQG 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCee-eEEEEEcCC
Confidence 457889999999999999999998642 35679999854332 23477899999999865544 555566677
Q ss_pred CeEEEEEecC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcE
Q 011988 75 DYNVLVIDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 144 (473)
Q Consensus 75 ~~~~lv~e~~-g~sL~~~l~~~~---------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~v 144 (473)
...+++|||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+|||++ .++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCCE
Confidence 7889999998 789999986432 2357788999999999999999999999999999999995 67889
Q ss_pred EEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHH
Q 011988 145 YIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQK 223 (473)
Q Consensus 145 kL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~ 223 (473)
+|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.+... ...
T Consensus 159 ~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~---~~~ 230 (277)
T cd05062 159 KIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN---EQV 230 (277)
T ss_pred EECCCCCccccCCccee-----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHH
Confidence 99999999765432221 11122356788999999999889999999999999999999 7899977532 222
Q ss_pred HHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 224 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 224 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
+..+...... .+...++..+.+++.+||+.+|++||++.++++.|+
T Consensus 231 ~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 231 LRFVMEGGLL----DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHcCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 3322222211 223567899999999999999999999999988765
No 131
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.4e-39 Score=332.71 Aligned_cols=253 Identities=21% Similarity=0.270 Sum_probs=196.2
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
..++|++.+.||+|+||.||+|.+..+++.||+|++.+. ....+..|+.+++.+.|++ |..+..+...+...+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~-iv~~~~~~~~~~~~~ 119 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW-VVQLFCAFQDDKYLY 119 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCC-EeeEEEEEEcCCEEE
Confidence 357899999999999999999999999999999985431 2234678899999888555 445555667788899
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+||||+ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+|+.+..
T Consensus 120 lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~---~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEEecccceeccc
Confidence 999999 8899999973 4689999999999999999999999999999999999994 778999999999987643
Q ss_pred CCCccccccccCCCcccCccccccccccCCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 233 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 233 (473)
... .......||+.|+|||++.+.. ++.++|||||||+||||++|..||.+.. ....+..+......
T Consensus 195 ~~~------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~---~~~~~~~i~~~~~~ 265 (370)
T cd05621 195 TGM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS---LVGTYSKIMDHKNS 265 (370)
T ss_pred CCc------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC---HHHHHHHHHhCCcc
Confidence 221 1123567999999999997643 7899999999999999999999997643 33344444432211
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCC--CCCHHHHHHHHHHHH
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDD--KPDYAYLKRLFRDLF 276 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~--RPt~~~l~~~L~~l~ 276 (473)
...+. ...++..+.+++..||..++.. |+++.++ +++.|
T Consensus 266 ~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~---l~hp~ 306 (370)
T cd05621 266 LNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEI---KQHPF 306 (370)
T ss_pred cCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHH---hcCcc
Confidence 11111 1246789999999999755433 7787665 44444
No 132
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-39 Score=338.34 Aligned_cols=254 Identities=20% Similarity=0.232 Sum_probs=196.6
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
..+..|.+.+.||.|+||.||+|.+..+++.||||... ...+.+|+++++.|+|.+++. +..++..+...+++|++
T Consensus 166 ~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---~~~~~~E~~iL~~L~HpnIv~-l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 166 VAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---YASSVHEARLLRRLSHPAVLA-LLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---ccCHHHHHHHHHHCCCCCCCc-EEEEEEECCEEEEEEEc
Confidence 34668999999999999999999999999999999632 234678999999999665554 55566777888999999
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 84 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 84 ~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+.++|.+++......+++..++.|+.||+.||.|||++|||||||||+||||+ ..+.+||+|||+++.+......
T Consensus 242 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vkL~DFGla~~~~~~~~~-- 316 (461)
T PHA03211 242 YRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDICLGDFGAACFARGSWST-- 316 (461)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEEEcccCCceeccccccc--
Confidence 99999999876556799999999999999999999999999999999999994 6788999999999866432211
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-----CHHHHHHHHhhcccc-----
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-----TKKQKYEKISEKKVS----- 233 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~-----~~~~~~~~i~~~~~~----- 233 (473)
.......||..|+|||++.+..++.++|||||||+||||++|..|+...... ...+....+......
T Consensus 317 ---~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 317 ---PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred ---ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 0113457999999999999999999999999999999999988765432211 111111111111100
Q ss_pred c-------------------------cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 234 T-------------------------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 234 ~-------------------------~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
. .... ...++.++.+||..||..||.+||++.+|++
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTR-YYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhh-hccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 0 0000 0134568999999999999999999888743
No 133
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.1e-38 Score=348.18 Aligned_cols=252 Identities=20% Similarity=0.292 Sum_probs=198.9
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeE-eCCe
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDY 76 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~-~~~~ 76 (473)
+...++|+++++||.|+||.||+|++..+++.||+|++.... ...+..|+.+++.|.|++++..+..|.. ....
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 345679999999999999999999999999999999854322 3457889999999998877777765543 4567
Q ss_pred EEEEEecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC-------CCcccCCCCCcEEEeeC-------
Q 011988 77 NVLVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK-------SFLHRDIKPDNFLMGLG------- 138 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~-------gIvHrDIKP~NILl~~~------- 138 (473)
+||||||+ +++|.+++... ...+++..++.|+.||+.||.|||+. +||||||||+||||+.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999 78999998743 34699999999999999999999984 49999999999999632
Q ss_pred -------CCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccC--CCCCchhhHHHHHHHHHHHHcCC
Q 011988 139 -------RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGS 209 (473)
Q Consensus 139 -------~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGviL~elltG~ 209 (473)
+....+||+|||+++.+..... .....||+.|+|||++.+ ..++.++||||||||||||++|.
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--------~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESM--------AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccccc--------ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 1234699999999986543221 134579999999999865 34889999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 210 LPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 210 ~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.||..... ..+.+..+..... . ....++.++.+||..||..+|++||++.+++
T Consensus 241 ~PF~~~~~--~~qli~~lk~~p~-l----pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL 293 (1021)
T PTZ00266 241 TPFHKANN--FSQLISELKRGPD-L----PIKGKSKELNILIKNLLNLSAKERPSALQCL 293 (1021)
T ss_pred CCCCcCCc--HHHHHHHHhcCCC-C----CcCCCCHHHHHHHHHHhcCChhHCcCHHHHh
Confidence 99976432 2222222222111 1 1235689999999999999999999988775
No 134
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.7e-39 Score=318.32 Aligned_cols=239 Identities=21% Similarity=0.242 Sum_probs=188.3
Q ss_pred EeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
||+|+||.||++.+..+|+.||+|.+.... ...+..|+++++.++|+ +|..+..+...+...+++|||+ |++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSP-FIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCC-cEEEEEEEEecCCeEEEEEecCCCCC
Confidence 699999999999999999999999854321 22355699999999755 4555555666778899999999 889
Q ss_pred HHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccccc
Q 011988 88 LEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166 (473)
Q Consensus 88 L~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~ 166 (473)
|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++ .++.++|+|||++........
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~~~~~~~~~~------ 150 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKT------ 150 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeeceeeeecCCCce------
Confidence 98887543 33589999999999999999999999999999999999994 678899999999976643221
Q ss_pred ccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCH-HHHHHHHhhccccccHHHHhcCCcH
Q 011988 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 167 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
.....|+..|+|||++.+..++.++|||||||++|||++|..||........ .+.......... ......+++
T Consensus 151 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 224 (277)
T cd05607 151 --ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV----KFEHQNFTE 224 (277)
T ss_pred --eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc----ccccccCCH
Confidence 1234689999999999998999999999999999999999999976433211 122222221111 111235789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 246 EFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
++.++|.+||+.||++||++.++.
T Consensus 225 ~~~~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 225 ESKDICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred HHHHHHHHHhccCHhhCCCCccch
Confidence 999999999999999999987653
No 135
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.7e-39 Score=319.83 Aligned_cols=255 Identities=18% Similarity=0.233 Sum_probs=189.8
Q ss_pred EeeEeecCceEEEEEEEc--CCCcEEEEEEcccCC-chhHHHHHHHHHHhcCCCCCCeeEEeeE-eCCeEEEEEecCCCC
Q 011988 12 GRKIGSGSFGEIYLGTNI--QTNEEVAIKLNVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYNVLVIDLLGPS 87 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~--~~~~~vAiK~~~~~~-~~~l~~E~~il~~L~~~~~i~~~~~~~~-~~~~~~lv~e~~g~s 87 (473)
.++||+|+||.||+|.+. .+++.||+|.+.... ...+.+|+.+++.++|++++..+..+.. .....+++|||++++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~ 85 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHD 85 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCC
Confidence 468999999999999965 467899999865433 4457899999999998877777665543 355689999999999
Q ss_pred HHHHHHHcC--------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeC-CCCCcEEEEecCCcccccCC
Q 011988 88 LEDLFNFCS--------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 88 L~~~l~~~~--------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~~ 158 (473)
|.+++.... ..+++..+..|+.||+.||.|||++||+||||||+|||+... +..+.+||+|||+|+.+...
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~ 165 (317)
T cd07868 86 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165 (317)
T ss_pred HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCC
Confidence 999886431 248999999999999999999999999999999999999532 34578999999999876433
Q ss_pred CCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC------HHHHHHHHhhcc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKYEKISEKK 231 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~------~~~~~~~i~~~~ 231 (473)
.. +........||..|+|||++.+. .++.++|||||||++|||++|+.||....... ....+..+....
T Consensus 166 ~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 166 LK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred Cc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 21 11122456789999999999874 58999999999999999999999997533211 011111111000
Q ss_pred -------------cc---c-----------------cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 232 -------------VS---T-----------------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 232 -------------~~---~-----------------~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.. . ..+......+.++.++|..||..||++|||++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 0 000001123467889999999999999999888753
No 136
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.8e-39 Score=316.23 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=198.6
Q ss_pred CceEEEeeEeecCceEEEEEEEc----CCCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNI----QTNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~----~~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
..|++.++||+|+||.||+|.+. .++..|++|....... ..+..|+.+++.+.|++++ .+..+.......+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIV-CLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCee-eEEEEEecCCceE
Confidence 57999999999999999999853 4567899998643222 3577899999999865555 4555566777889
Q ss_pred EEEecC-CCCHHHHHHHcC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCC
Q 011988 79 LVIDLL-GPSLEDLFNFCS----------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 141 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~----------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 141 (473)
++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ ..
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~---~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG---EQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc---CC
Confidence 999999 779999985321 2478899999999999999999999999999999999994 67
Q ss_pred CcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCH
Q 011988 142 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTK 220 (473)
Q Consensus 142 ~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~ 220 (473)
+.+||+|||+++........ .......++..|+|||++.+..++.++|||||||+||||++ |..||.+...
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--- 232 (283)
T cd05090 161 LHVKISDLGLSREIYSADYY-----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--- 232 (283)
T ss_pred CcEEeccccccccccCCcce-----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 88999999999876433211 11233456778999999998889999999999999999998 9999977532
Q ss_pred HHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 221 KQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 221 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
......+...... .....+++++.+++.+||..||++||++.+|.+.|+.
T Consensus 233 ~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 QEVIEMVRKRQLL----PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 2222323222211 2345688999999999999999999999999888763
No 137
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.3e-39 Score=327.59 Aligned_cols=259 Identities=20% Similarity=0.320 Sum_probs=200.5
Q ss_pred CCceEEEeeEeecCceEEEEEEEc-----CCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCee-EEeeEeCC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNL-RWFGVEGD 75 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~-~~~~~~~~ 75 (473)
.++|++.+.||.|+||.||+|.+. .+++.||||++.... ...+..|+.++..+.+|++|..+ ..+...+.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 468999999999999999999853 467889999864432 23477899999999766555554 44555666
Q ss_pred eEEEEEecC-CCCHHHHHHHcC----------------------------------------------------------
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCS---------------------------------------------------------- 96 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~---------------------------------------------------------- 96 (473)
..+++|||+ +++|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 789999999 889999986421
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccccccc
Q 011988 97 --------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE 168 (473)
Q Consensus 97 --------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~ 168 (473)
..+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++....... +..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~-----~~~ 237 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPD-----YVR 237 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcc-----hhh
Confidence 2367888899999999999999999999999999999994 678999999999986543221 111
Q ss_pred CCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHH
Q 011988 169 NKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 247 (473)
Q Consensus 169 ~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 247 (473)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||...... ......+..... . .....+++++
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~-~---~~~~~~~~~~ 311 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTR-M---RAPDYTTPEM 311 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHHHHHhccCC-C---CCCCCCCHHH
Confidence 123346678999999999899999999999999999996 99999765332 111222211111 1 1123467899
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 248 ASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 248 ~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
.+++..||..||++||++.+|++.|+.+++.
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998864
No 138
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.9e-39 Score=309.64 Aligned_cols=247 Identities=27% Similarity=0.437 Sum_probs=197.0
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchh-----HHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-----LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~-----l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
|++++.||+|+||.||++.+..+++.||+|+........ ...|+.+++.+. +++|..+..+.......+++||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR-HPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT-BTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc-ccccccccccccccccccccccc
Confidence 899999999999999999999999999999966655433 234899999996 55566666677778889999999
Q ss_pred CCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 84 LGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 84 ~g~-sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
+.+ +|.+++. ....+++.+++.++.||+.||.+||++||+|+||||+|||+ +.++.++|+|||.+........
T Consensus 80 ~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~~~~~~-- 153 (260)
T PF00069_consen 80 CPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKLSENNE-- 153 (260)
T ss_dssp ETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEESTSTTS--
T ss_pred ccccccccccc-ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccc--
Confidence 966 9999998 34579999999999999999999999999999999999999 4789999999999976422111
Q ss_pred ccccccCCCcccCcccccccccc-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh-
Q 011988 163 HIPYRENKNLTGTARYASMNTHL-GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC- 240 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~-~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~- 240 (473)
......++..|+|||++. +..++.++||||||+++|+|++|..||...........+........ .....
T Consensus 154 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 225 (260)
T PF00069_consen 154 -----NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPL---PSSSQQ 225 (260)
T ss_dssp -----EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHH---HHHTTS
T ss_pred -----ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccc---cccccc
Confidence 123567899999999998 78899999999999999999999999987522222222222222111 11111
Q ss_pred -cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 -RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 -~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
...+.++.++|..||+.||++||++.+|++
T Consensus 226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 226 SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 122489999999999999999999887753
No 139
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.8e-39 Score=312.35 Aligned_cols=246 Identities=21% Similarity=0.316 Sum_probs=198.9
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
.+|++.+.||+|+||.||++.. .+..||+|...... ...+..|+.+++.++|.+.+..+..+.......+++|||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 5799999999999999999975 47889999854433 3458899999999997777766655555667789999999
Q ss_pred CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 g~sL~~~l~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++..... .+++..++.++.||+.||+|||++||+||||||+||+++ +++.+||+|||+++......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~---- 156 (256)
T cd05082 84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQ---- 156 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCCcEEecCCccceeccccC----
Confidence 6799999875433 488999999999999999999999999999999999994 77899999999997554322
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 242 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 242 (473)
....++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+.... . ..+...
T Consensus 157 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~~~-~---~~~~~~ 223 (256)
T cd05082 157 ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVEKGY-K---MDAPDG 223 (256)
T ss_pred ------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhcCC-C---CCCCCC
Confidence 12345668999999998889999999999999999997 9999976432 22222222211 1 122356
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 243 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 243 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
+|+.+.+++.+||..+|++||++.++.+.|++
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 224 CPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 78999999999999999999999999998875
No 140
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3e-39 Score=313.68 Aligned_cols=254 Identities=24% Similarity=0.337 Sum_probs=202.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||.|+||.||+|++..+++.||||...... ...+..|+.+++.++|++++. +..+.......+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIK-YLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceee-eeeeEEECCeEEEE
Confidence 68999999999999999999999999999999743211 234678999999998665555 44455667788999
Q ss_pred EecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 81 IDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++ .++.++|+|||++..+.
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECccccceecc
Confidence 9999 67999888632 34589999999999999999999999999999999999995 67889999999998765
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
..... .....|+..|+|||.+.+..++.++|||||||++|||++|..||..... ........+........
T Consensus 158 ~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~- 228 (267)
T cd08228 158 SKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLFSLCQKIEQCDYPPL- 228 (267)
T ss_pred chhHH-------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-cHHHHHHHHhcCCCCCC-
Confidence 43211 1235688999999999988899999999999999999999999976432 22222333322221111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
....++..+.++|.+||..+|++||++.++++.|+.+
T Consensus 229 --~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 229 --PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred --ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1234678999999999999999999999999998865
No 141
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.8e-39 Score=316.65 Aligned_cols=241 Identities=21% Similarity=0.259 Sum_probs=192.4
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.|++.+.||+|+||.||+|.+..+++.||||.+.... ...+..|+.+++.++|++++.. ...+...+..+++|
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~-~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeee-eEEEecCCEEEEEE
Confidence 4889999999999999999999999999999854321 2346679999999987665554 44455667889999
Q ss_pred ecC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++ ..+.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeccceeecCCCc
Confidence 998 789999886433 3599999999999999999999999999999999999994 67889999999987543322
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. .....|+..|+|||++.+..++.++|||||||++|+|++|..||..............+... ....+
T Consensus 157 ~--------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~----~~~~~ 224 (285)
T cd05630 157 T--------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----VQEEY 224 (285)
T ss_pred c--------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh----hhhhc
Confidence 1 12347899999999999999999999999999999999999999875432222222222111 11223
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCC
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPD 264 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt 264 (473)
...+++++.+|+..||+.||++||+
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~R~s 249 (285)
T cd05630 225 SEKFSPDARSLCKMLLCKDPKERLG 249 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHccC
Confidence 4567899999999999999999999
No 142
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-39 Score=314.93 Aligned_cols=253 Identities=19% Similarity=0.261 Sum_probs=197.3
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
....++|++.++||+|+||.||+|++..+++.||+|+.... ....+..|+.+++.++|++++.. ..++......++
T Consensus 5 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~-~~~~~~~~~~~i 83 (267)
T cd06646 5 RNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAY-FGSYLSREKLWI 83 (267)
T ss_pred cCchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeee-eEEEEeCCEEEE
Confidence 34567799999999999999999999999999999985432 23346789999999987666654 445566778899
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
||||+ +++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++ ..+.+||+|||++......
T Consensus 84 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 84 CMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNGDVKLADFGVAAKITAT 159 (267)
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEECcCccceeeccc
Confidence 99999 6799998864 45789999999999999999999999999999999999994 6788999999999866432
Q ss_pred CCccccccccCCCcccCcccccccccc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
.. ......|+..|+|||.+. ...++.++|||||||++|||++|..||....... ....+........
T Consensus 160 ~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~ 229 (267)
T cd06646 160 IA-------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---ALFLMSKSNFQPP 229 (267)
T ss_pred cc-------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh---hheeeecCCCCCC
Confidence 21 113457889999999885 3447889999999999999999999996543211 1111111111111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.......++.++.++|..||..+|++||++++|++
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 230 KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 11112356889999999999999999999998865
No 143
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.9e-39 Score=317.28 Aligned_cols=252 Identities=24% Similarity=0.363 Sum_probs=200.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
.++|.+.+.||+|+||.||+|.+.. +++.||||+..... ...+.+|+++++.+.|.+ +..+..+......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHEN-IVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCC-chheeeEEecCCC
Confidence 4579999999999999999998753 35789999854432 246889999999998655 4555556666788
Q ss_pred EEEEEecC-CCCHHHHHHHcC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCC
Q 011988 77 NVLVIDLL-GPSLEDLFNFCS-------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 142 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~-------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~ 142 (473)
.+++|||+ +++|.+++...+ ..+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG---YDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc---CCC
Confidence 99999998 889999987432 3478899999999999999999999999999999999994 679
Q ss_pred cEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHH
Q 011988 143 QVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKK 221 (473)
Q Consensus 143 ~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~ 221 (473)
.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.+... .
T Consensus 160 ~~kl~d~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~---~ 231 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN---E 231 (280)
T ss_pred eEEECCcccceecccCcce-----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH---H
Confidence 9999999999765332211 11123356788999999999999999999999999999998 9999976543 2
Q ss_pred HHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 222 QKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 222 ~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
.....+...... .....++.++.+++.+||..||++||++.++++.|+
T Consensus 232 ~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 EVIECITQGRLL----QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 233333322221 123467899999999999999999999999988875
No 144
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.7e-39 Score=321.18 Aligned_cols=257 Identities=20% Similarity=0.270 Sum_probs=202.9
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcE--EEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEE--VAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~--vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
-++|++.+.||.|+||.||+|.+..++.. +++|...... ...+..|+.++..+.+|++|..+..++......++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 36899999999999999999998877764 5666543321 23577899999999667777777777788888999
Q ss_pred EEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCc
Q 011988 80 VIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 143 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~ 143 (473)
+|||+ +++|.+++.... ..+++.+++.++.||+.||+|||++||+||||||+|||++ .++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---CCCc
Confidence 99999 789999987432 2578999999999999999999999999999999999994 6788
Q ss_pred EEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHH
Q 011988 144 VYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQ 222 (473)
Q Consensus 144 vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~ 222 (473)
+||+|||++....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.... +
T Consensus 163 ~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~ 231 (303)
T cd05088 163 AKIADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---E 231 (303)
T ss_pred EEeCccccCcccchhh--------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---H
Confidence 9999999986432110 0112234678999999988889999999999999999998 99999765432 2
Q ss_pred HHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 223 KYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 223 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
....+..... ......+++++.+++.+||+.+|++||+++++++.|..++....
T Consensus 232 ~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 232 LYEKLPQGYR----LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred HHHHHhcCCc----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 2222221110 11123468899999999999999999999999999998876554
No 145
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=5.6e-39 Score=316.02 Aligned_cols=242 Identities=21% Similarity=0.284 Sum_probs=192.8
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.|++.+.||.|+||+||+|.+..+++.||+|++.... ...+..|+.+++.++|++++ .+.++...++..+++|
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~-~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVV-NLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCce-eEEEEEecCCEEEEEE
Confidence 4889999999999999999999999999999854322 23467899999999865555 4555566778899999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ +.+.+||+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEecCCcceecCCCC
Confidence 999 77898887643 34699999999999999999999999999999999999994 67889999999997653321
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. .....|+..|+|||++.+..++.++|||||||++|||++|..||.+.......+ .+... .......+
T Consensus 157 ~--------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~---~~~~~-~~~~~~~~ 224 (285)
T cd05632 157 S--------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKRE---EVDRR-VLETEEVY 224 (285)
T ss_pred c--------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHh-hhcccccc
Confidence 1 123578999999999999899999999999999999999999998653322111 12111 11111223
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCH
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~ 265 (473)
...++.++.+|+..||..||++||+.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05632 225 SAKFSEEAKSICKMLLTKDPKQRLGC 250 (285)
T ss_pred CccCCHHHHHHHHHHccCCHhHcCCC
Confidence 45678999999999999999999994
No 146
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.4e-39 Score=310.38 Aligned_cols=248 Identities=20% Similarity=0.258 Sum_probs=197.8
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
++|++.+.||+|+||.||++.+. .+..+|+|..... ...++..|+.+++.++|++++ .+..++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLV-QLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCce-eEEEEEccCCCEEEEEEcC
Confidence 57999999999999999999874 4567999985433 245688999999999865544 5555667777889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+++........
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~~~~~~~~~~-- 156 (256)
T cd05114 82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKVSDFGMTRYVLDDEYT-- 156 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEECCCCCccccCCCcee--
Confidence 7899999875555689999999999999999999999999999999999994 6788999999999865432211
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 242 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 242 (473)
......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+.+..+...... .....
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~---~~~~~~i~~~~~~----~~~~~ 225 (256)
T cd05114 157 ----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN---YEVVEMISRGFRL----YRPKL 225 (256)
T ss_pred ----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHCCCCC----CCCCC
Confidence 1123345678999999998889999999999999999999 9999976432 3333333322111 11234
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 243 YPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 243 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
.+.++.+++..||..+|++||++++|.+.|
T Consensus 226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 226 ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 578999999999999999999999998765
No 147
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.8e-39 Score=330.55 Aligned_cols=251 Identities=22% Similarity=0.300 Sum_probs=195.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+. ....+..|+.+++.+.|++ |..+......+...++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~-iv~~~~~~~~~~~~~l 120 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW-VVQLFYAFQDDRYLYM 120 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCC-CCeEEEEEEcCCEEEE
Confidence 47899999999999999999999999999999985431 1233667888888887555 4455556677888999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
||||+ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.....
T Consensus 121 v~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 121 VMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCCEEEEeCCceeEcCcC
Confidence 99999 8899999873 4589999999999999999999999999999999999994 7789999999999876432
Q ss_pred CCccccccccCCCcccCccccccccccCCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
.. .......||+.|+|||++.+.. ++.++|||||||+||||++|..||.... ....+.++.......
T Consensus 196 ~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~---~~~~~~~i~~~~~~~ 266 (371)
T cd05622 196 GM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS---LVGTYSKIMNHKNSL 266 (371)
T ss_pred Cc------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCCcc
Confidence 21 1123467999999999997643 7899999999999999999999997643 334445544322111
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCC---CCCHHHHHHHHHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDD---KPDYAYLKRLFRDLF 276 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~---RPt~~~l~~~L~~l~ 276 (473)
... ....++.++.++|..||. ++.. |+++++| +++.+
T Consensus 267 ~~~-~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei---~~h~~ 306 (371)
T cd05622 267 TFP-DDNDISKEAKNLICAFLT-DREVRLGRNGVEEI---KRHLF 306 (371)
T ss_pred cCC-CcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHH---hcCcc
Confidence 111 123578999999999998 5555 5565554 55544
No 148
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.6e-39 Score=313.97 Aligned_cols=252 Identities=19% Similarity=0.325 Sum_probs=195.7
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCc--EEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEe-----CCe
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNE--EVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVE-----GDY 76 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~--~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~-----~~~ 76 (473)
|.+.++||+|+||.||+|.+..++. .||||..... ....+..|+.+++.++|.+++..+..+... ...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4578999999999999999877765 6899985432 234577899999999876666665443221 234
Q ss_pred EEEEEecC-CCCHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecC
Q 011988 77 NVLVIDLL-GPSLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 150 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~-----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 150 (473)
.+++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN---ENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc---CCCCEEECCCC
Confidence 68899998 78999887432 23489999999999999999999999999999999999994 67899999999
Q ss_pred CcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhh
Q 011988 151 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISE 229 (473)
Q Consensus 151 la~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 229 (473)
+++.+..... +.......++..|++||.+.+..++.++|||||||++|||++ |..||.+... .+.+..+..
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~~~ 229 (272)
T cd05075 158 LSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---SEIYDYLRQ 229 (272)
T ss_pred cccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHc
Confidence 9987644321 111123356778999999999899999999999999999999 8999976432 233333332
Q ss_pred ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 230 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 230 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
.... .....++..+.++|.+||..||++||++.+|++.|+++
T Consensus 230 ~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 GNRL----KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCC----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 2211 12346789999999999999999999999999998875
No 149
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.8e-39 Score=314.45 Aligned_cols=252 Identities=17% Similarity=0.319 Sum_probs=196.5
Q ss_pred eEEEeeEeecCceEEEEEEEcCC---CcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC-----C
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG-----D 75 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~-----~ 75 (473)
|.+.+.||+|+||.||+|.+..+ +..||||++.... ...+..|+.+++.++|++++..+..+.... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 67899999999999999987653 4789999854332 235778999999998766665544333222 2
Q ss_pred eEEEEEecC-CCCHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEec
Q 011988 76 YNVLVIDLL-GPSLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 149 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~-----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 149 (473)
..+++|||+ +++|..++... ...+++..++.++.||+.||.|||++||+||||||+||+++ +++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR---EDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC---CCCeEEECCc
Confidence 478999998 88999888532 23589999999999999999999999999999999999994 6789999999
Q ss_pred CCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHh
Q 011988 150 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKIS 228 (473)
Q Consensus 150 Gla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~ 228 (473)
|+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+.+..+.
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---~~~~~~~~ 229 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---HEIYDYLR 229 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH
Confidence 999876543321 11122345678999999998889999999999999999999 9999976443 23333333
Q ss_pred hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 229 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 229 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
..... .....++.++.+++.+||..||++||++.+|++.|+++
T Consensus 230 ~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 HGNRL----KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred cCCCC----CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 22211 12356789999999999999999999999999999876
No 150
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.2e-39 Score=323.95 Aligned_cols=234 Identities=21% Similarity=0.269 Sum_probs=185.7
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHH-HHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKL-YKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~i-l~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
+.||+|+||+||+|.+..+|+.||||++.+. ....+..|..+ ++.+.| ++|..+..+....+..+++|||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-p~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKH-PFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCC-CCCccEEEEEecCCEEEEEEcCCC
Confidence 4799999999999999999999999985432 12234455544 455665 45555656667788899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
+++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 80 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~---~~~~~kL~DfG~~~~~~~~~~---- 151 (325)
T cd05604 80 GGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD---SQGHVVLTDFGLCKEGIAQSD---- 151 (325)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEeecCCcccCCCCCC----
Confidence 7899888763 45799999999999999999999999999999999999994 778999999999875432211
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCc
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 244 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 244 (473)
......||..|+|||++.+..++.++|||||||++|||++|..||.... ..+.+..+..... .+...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~---~~~~~~~~~~~~~-----~~~~~~~ 220 (325)
T cd05604 152 ---TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD---VAEMYDNILHKPL-----VLRPGAS 220 (325)
T ss_pred ---CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC---HHHHHHHHHcCCc-----cCCCCCC
Confidence 1234579999999999999999999999999999999999999997643 2333344333221 1234578
Q ss_pred HHHHHHHHHHhcCCCCCCCCHH
Q 011988 245 TEFASYFHYCRSLRFDDKPDYA 266 (473)
Q Consensus 245 ~~l~~li~~cl~~dp~~RPt~~ 266 (473)
.++.++|..||..+|.+||++.
T Consensus 221 ~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 221 LTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred HHHHHHHHHHhccCHHhcCCCC
Confidence 8999999999999999999875
No 151
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.5e-39 Score=311.57 Aligned_cols=254 Identities=16% Similarity=0.262 Sum_probs=202.5
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCC---CcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
.++|++.+.||+|+||.||+|.+..+ ...||||+..... ...+..|+.+++.++|++ +..+..+.......+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPN-IIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCC-cceEeEEEecCCceE
Confidence 36799999999999999999998644 4579999854432 234678999999998654 445555666777889
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
++|||+ +++|.+++......+++..++.++.|++.||.|||++||+|+||||+|||++ .++.++|+|||+++.+..
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCCEEECccchhhcccc
Confidence 999999 7899999986666899999999999999999999999999999999999994 678899999999987752
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
..... ......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+.......
T Consensus 159 ~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~~-- 228 (266)
T cd05033 159 SEATY-----TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN---QDVIKAVEDGYRLP-- 228 (266)
T ss_pred cccce-----eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH---HHHHHHHHcCCCCC--
Confidence 22111 0112345678999999998899999999999999999998 9999976432 22333332211111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
....+|+.+.+++..||+.+|++||++.+|.+.|.++
T Consensus 229 --~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 --PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1245789999999999999999999999999999875
No 152
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.5e-39 Score=311.80 Aligned_cols=247 Identities=21% Similarity=0.324 Sum_probs=193.6
Q ss_pred eEeecCceEEEEEEEc--CCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CC
Q 011988 14 KIGSGSFGEIYLGTNI--QTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GP 86 (473)
Q Consensus 14 ~LG~G~fG~Vy~a~~~--~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~ 86 (473)
.||+|+||.||+|.+. ..+..||+|+..... ...+.+|+.+++.++|.+++..+..+ .....++||||+ ++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~--~~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC--EAEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEE--cCCCeEEEEEeCCCC
Confidence 4899999999999865 445679999854433 24478899999999877766665543 345678999999 78
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccccc
Q 011988 87 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166 (473)
Q Consensus 87 sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~ 166 (473)
+|.+++......+++..++.++.||+.||.|||++|++||||||+|||++ .++.+||+|||++..+.......
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~~~~---- 152 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGLSKALGADDSYY---- 152 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCccccccCCccce----
Confidence 99999876566799999999999999999999999999999999999994 67889999999998654332211
Q ss_pred ccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 167 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.+.... .....+..... ..+...+++
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~~~----~~~~~~~~~ 225 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---EVMSFIEQGKR----LDCPAECPP 225 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHHCCCC----CCCCCCCCH
Confidence 11112234678999999998889999999999999999996 99999875432 22222222111 112346789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 246 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
++.++|..||..+|++||++.+|.+.|+.++
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 9999999999999999999999999998764
No 153
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.8e-39 Score=316.09 Aligned_cols=257 Identities=23% Similarity=0.316 Sum_probs=204.8
Q ss_pred CCceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCCc---hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~~---~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
..+|.+.+.||.|+||.||+|.+.. ++..|++|....... ..+.+|+.+++.+.|+ ++..+..++......
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~ 82 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHE-HIVKFYGVCGDGDPL 82 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCC-CcceEEEEEccCCce
Confidence 4579999999999999999998543 455689998544432 4578899999999865 555566666777889
Q ss_pred EEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCC
Q 011988 78 VLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 141 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 141 (473)
++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ .+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~---~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG---AN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---cC
Confidence 9999999 889999987432 3488999999999999999999999999999999999994 67
Q ss_pred CcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCH
Q 011988 142 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTK 220 (473)
Q Consensus 142 ~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~ 220 (473)
+.++|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--- 231 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--- 231 (291)
T ss_pred CcEEECCCCcccccCCCcee-----ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 89999999999765432211 11233457889999999999899999999999999999998 9999976543
Q ss_pred HHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 221 KQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 221 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
...+..+...... .....+|.++.+++.+||+.+|++||++.+|.+.|+++...
T Consensus 232 ~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 232 TEVIECITQGRVL----ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHHHHhCCCCC----CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 2233333222221 12345789999999999999999999999999999998654
No 154
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5e-39 Score=316.73 Aligned_cols=255 Identities=18% Similarity=0.306 Sum_probs=199.5
Q ss_pred ceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
+|++.+.||+|+||.||+|.+.. ....|++|+..... ...+..|+.+++.+.|++++. +..++......+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK-LYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEee-EEEEEecCCCcE
Confidence 58899999999999999998753 23578899854433 235788999999998665555 445556677789
Q ss_pred EEEecC-CCCHHHHHHHcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEE
Q 011988 79 LVIDLL-GPSLEDLFNFCS-----------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFL 134 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~-----------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NIL 134 (473)
++|||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 999999 789999986421 24788999999999999999999999999999999999
Q ss_pred EeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCC
Q 011988 135 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQ 213 (473)
Q Consensus 135 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~ 213 (473)
++ +++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 160 l~---~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 231 (290)
T cd05045 160 VA---EGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 231 (290)
T ss_pred Ec---CCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence 94 6789999999999865433221 11123355778999999998889999999999999999998 999997
Q ss_pred CCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 214 GLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 214 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
+... .. +........... ....++.++.+++..||+.+|++||++.++.+.|++++.+
T Consensus 232 ~~~~---~~-~~~~~~~~~~~~---~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 232 GIAP---ER-LFNLLKTGYRME---RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CCCH---HH-HHHHHhCCCCCC---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 6432 22 222222111111 2346789999999999999999999999999999999854
No 155
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.9e-39 Score=325.92 Aligned_cols=249 Identities=19% Similarity=0.244 Sum_probs=191.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLG 85 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g 85 (473)
..+|++++.||+|+||.||+|.+..+++.||+|+.... ....|+.+++.++|.+++ .+..+.......++||+++.
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---TTLIEAMLLQNVNHPSVI-RMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---ccHHHHHHHHhCCCCCCc-ChhheEEeCCeeEEEEEccC
Confidence 45799999999999999999999999999999984332 345799999999966555 45555667778899999999
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++......+++..++.|+.||+.||.|||++|||||||||+|||+ +..+.+||+|||+++.......
T Consensus 141 ~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~----- 212 (357)
T PHA03209 141 SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAPA----- 212 (357)
T ss_pred CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCcc-----
Confidence 99999987667789999999999999999999999999999999999999 4778899999999975332111
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHH-------HHHHHHhhc-c-----c
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-------QKYEKISEK-K-----V 232 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~-------~~~~~i~~~-~-----~ 232 (473)
.....||..|+|||++.+..++.++|||||||+||||+++..|+......... ..+..+... . .
T Consensus 213 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (357)
T PHA03209 213 ---FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEF 289 (357)
T ss_pred ---cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhc
Confidence 13457999999999999999999999999999999999865554332221100 001111000 0 0
Q ss_pred c-----ccHH-----------------HH-hcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 233 S-----TSIE-----------------AL-CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 233 ~-----~~~~-----------------~l-~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
. .... .+ ...++.++.++|.+||+.||.+|||+.+|+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l 349 (357)
T PHA03209 290 PRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEIL 349 (357)
T ss_pred CCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHh
Confidence 0 0000 00 124577788899999999999999988774
No 156
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=7.8e-39 Score=313.38 Aligned_cols=259 Identities=20% Similarity=0.308 Sum_probs=205.0
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcC----CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ----TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~----~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
-.++|++.+.||+|+||.||+|.+.. ++..|++|.+.... ...+..|+.+++.+.|.+++..+..+...+..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35789999999999999999999876 35789999854332 23477899999999877777666555555677
Q ss_pred EEEEEecC-CCCHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEe
Q 011988 77 NVLVIDLL-GPSLEDLFNFCS-------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~-------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 148 (473)
.+++++|+ +++|.+++.... ..+++.+++.++.||+.||+|||+++|+||||||+|||++ +.+.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEEECC
Confidence 89999998 789999987542 3589999999999999999999999999999999999995 678999999
Q ss_pred cCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHH
Q 011988 149 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 149 FGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i 227 (473)
||+++.+....... ......++..|+|||++.+..++.++|||||||++||+++ |+.||..... ......+
T Consensus 161 ~g~~~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~ 232 (280)
T cd05043 161 NALSRDLFPMDYHC-----LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEMAAYL 232 (280)
T ss_pred CCCcccccCCceEE-----eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHHHHHH
Confidence 99998764432211 0122356778999999999889999999999999999998 9999976533 2222222
Q ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 228 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
... .... ....+|+++.+++.+||..+|++||++.++++.|.++..+
T Consensus 233 ~~~-~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 233 KDG-YRLA---QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HcC-CCCC---CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 211 1111 1235689999999999999999999999999999988653
No 157
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.3e-39 Score=315.11 Aligned_cols=255 Identities=18% Similarity=0.218 Sum_probs=196.7
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcE----EEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEE----VAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~----vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
.++|++.+.||.|+||.||+|.+..+++. |++|...... ...+..|+.++..+.|++++..+. ++. +...
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~-~~~-~~~~ 83 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLG-ICP-GASL 83 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEE-EEC-CCcc
Confidence 46799999999999999999998877764 6777643322 234556666778888666555444 443 3345
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
++++||+ +++|.+++......+++..++.|+.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~---~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK---SDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEEcCCccceecc
Confidence 6777777 8999999987667899999999999999999999999999999999999994 67899999999998654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
...... ......++..|++||.+.+..++.++|||||||++|||++ |..||.+.... .+..+........
T Consensus 161 ~~~~~~-----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~ 231 (279)
T cd05111 161 PDDKKY-----FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH----EVPDLLEKGERLA 231 (279)
T ss_pred CCCccc-----ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHCCCcCC
Confidence 332111 1123457788999999998899999999999999999998 99999875432 2222222221111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
....++.++.+++..||..||++||++.++.+.|..+..
T Consensus 232 ---~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 232 ---QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 123467889999999999999999999999999888764
No 158
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.3e-39 Score=316.60 Aligned_cols=256 Identities=20% Similarity=0.323 Sum_probs=202.0
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCC-----CcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
.++|++.+.||+|+||.||++.+... ...||+|+...... ..+..|+.+++.+..|++|..+..+......
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 46899999999999999999997643 36899998654332 3477899999999555666666666677778
Q ss_pred EEEEEecC-CCCHHHHHHHc---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC
Q 011988 77 NVLVIDLL-GPSLEDLFNFC---------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~---------------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 140 (473)
.+++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ +
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~---~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT---E 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc---C
Confidence 89999998 88999998632 34689999999999999999999999999999999999994 6
Q ss_pred CCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 011988 141 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGT 219 (473)
Q Consensus 141 ~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~ 219 (473)
++.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-- 240 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYY-----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-- 240 (293)
T ss_pred CCeEEeCccccccccccccce-----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH--
Confidence 789999999999876543211 11122345678999999998889999999999999999997 9999976432
Q ss_pred HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 220 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
.+.+..+...... .....++.++.+++..||..||++||++.+|++.|++++
T Consensus 241 -~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 -EELFKLLKEGYRM----EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -HHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 2222222222111 122356889999999999999999999999999998764
No 159
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=328.12 Aligned_cols=257 Identities=21% Similarity=0.356 Sum_probs=211.9
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
.....+||-|.||.||.|.|++....||||.++.+ ...+|+.|+.+|+.|.|++.|..+ .++...-.+||+.||| .
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLL-GVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL-GVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHh-hhhccCCCeEEEEecccC
Confidence 45668999999999999999999999999985544 356799999999999976666555 4555666678888887 8
Q ss_pred CCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 86 PSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 86 ~sL~~~l~~~~~~-ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
|+|.+++..|++. ++.-.++.++.||..|++||..+++|||||-..|+|++ .+..|||+|||+++.+..+...-|
T Consensus 348 GNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvADFGLsRlMtgDTYTAH- 423 (1157)
T KOG4278|consen 348 GNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVADFGLSRLMTGDTYTAH- 423 (1157)
T ss_pred ccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeeccchhhhhcCCceecc-
Confidence 9999999988764 67777889999999999999999999999999999995 788999999999999877654332
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
....-...|.|||.+.-..++.|+|||+|||+|||+.| |.-||.+.... +.|. +.++.+.. .-..+|
T Consensus 424 -----AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS---qVY~-LLEkgyRM---~~PeGC 491 (1157)
T KOG4278|consen 424 -----AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYG-LLEKGYRM---DGPEGC 491 (1157)
T ss_pred -----cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH---HHHH-HHhccccc---cCCCCC
Confidence 22333567999999999999999999999999999998 99999986543 3332 22222221 224689
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQ 282 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~ 282 (473)
|+.+++||..||++.|.+||+|.++.+.|+.+|....+.
T Consensus 492 PpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSis 530 (1157)
T KOG4278|consen 492 PPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSIS 530 (1157)
T ss_pred CHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999766543
No 160
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.5e-39 Score=317.40 Aligned_cols=256 Identities=18% Similarity=0.273 Sum_probs=197.6
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCC----------------cEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN----------------EEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIP 65 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~----------------~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~ 65 (473)
.++|+++++||+|+||.||+|.+...+ ..||+|++.... ...+..|+++++.+.|++.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~- 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA- 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe-
Confidence 468999999999999999999876543 468999865443 34577899999999866555
Q ss_pred eeEEeeEeCCeEEEEEecC-CCCHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEE
Q 011988 66 NLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFL 134 (473)
Q Consensus 66 ~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~----------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NIL 134 (473)
.+..++..+...+++||++ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 4555556667889999998 789999987543 26899999999999999999999999999999999999
Q ss_pred EeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc--CCCCC
Q 011988 135 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPW 212 (473)
Q Consensus 135 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt--G~~Pf 212 (473)
++ ..+.++|+|||+++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 163 i~---~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~ 234 (296)
T cd05051 163 VG---KNYTIKIADFGMSRNLYSSDYYR-----VQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY 234 (296)
T ss_pred ec---CCCceEEccccceeecccCccee-----ecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence 95 66899999999997654332111 1123456788999999998889999999999999999998 78888
Q ss_pred CCCCCCCHHHHHHHHhhc---cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 213 QGLKAGTKKQKYEKISEK---KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 213 ~~~~~~~~~~~~~~i~~~---~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
..... .+.+..+... ............+|.++.+++..||+.||++||++.+|.+.|+
T Consensus 235 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 235 EHLTD---QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCcCh---HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 76433 2222222211 0000001112356789999999999999999999999988775
No 161
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.3e-38 Score=316.22 Aligned_cols=257 Identities=22% Similarity=0.313 Sum_probs=202.2
Q ss_pred cCCceEEEeeEeecCceEEEEEEEc-----CCCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGD 75 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~ 75 (473)
..++|.+.+.||+|+||.||+|.+. .++..||||+...... ..+..|+.+++.+..|++|..+..++....
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3468999999999999999999853 3456899998654332 347789999999955666666666777778
Q ss_pred eEEEEEecC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
..+++|||+ +++|.+++.... ..+++.+++.|+.||+.||+|||+++|+|+||||+|||++ ..+.++|+|||+++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CCCeEEECCCcccc
Confidence 899999998 789999987433 2389999999999999999999999999999999999994 67889999999998
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccc
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKV 232 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 232 (473)
.+...... .......++..|+|||.+.+..++.++|||||||++|||++ |..||........ +.+......
T Consensus 190 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~---~~~~~~~~~ 261 (302)
T cd05055 190 DIMNDSNY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK---FYKLIKEGY 261 (302)
T ss_pred cccCCCce-----eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH---HHHHHHcCC
Confidence 66543211 01123456788999999999899999999999999999998 9999987543221 111111111
Q ss_pred cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 233 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 233 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
.. ......++++.+++.+||..+|++||++.+|.+.|+++
T Consensus 262 ~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 RM---AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred cC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11 11235688999999999999999999999999999875
No 162
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.1e-38 Score=309.14 Aligned_cols=252 Identities=22% Similarity=0.353 Sum_probs=201.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
.++|++.+.||.|+||.||+|.+. .++.||||...... ..++..|+.+++.++|.+ +..+..+.......+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPK-LIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCC-ccceeEEEecCCCeeeeeec
Confidence 477999999999999999999964 55789999854432 356889999999998655 44555566777788999999
Q ss_pred C-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 84 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 84 ~-g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++ ..+.+||+|||+++.+......
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEECCcceEEEccCCccc
Confidence 9 899999987543 4689999999999999999999999999999999999995 6788999999999877533211
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
. .....++..|+|||.+.+..++.++|||||||++|||++ |+.||.+... ...+..+..... . ...
T Consensus 160 ~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~~~-~---~~~ 226 (261)
T cd05068 160 A------REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AEVLQQVDQGYR-M---PCP 226 (261)
T ss_pred c------cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCC-C---CCC
Confidence 1 112233468999999999899999999999999999999 9999977542 222333322211 1 112
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
..++..+.+++.+||+.+|++||++.+|.+.|+++
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 35789999999999999999999999999998753
No 163
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.9e-39 Score=323.87 Aligned_cols=233 Identities=21% Similarity=0.246 Sum_probs=185.2
Q ss_pred EeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhc--CCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~--~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
||+|+||+||+|++..+++.||||++.+.. ......|..++..+. ++++|..+..+.......++||||+ +
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999864321 122445666666554 6777777777778888999999999 7
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||||+ .++.+||+|||+++.......
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a~~~~~~~~----- 151 (330)
T cd05586 81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDFGLSKANLTDNK----- 151 (330)
T ss_pred ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecCCcCcCCCCCCC-----
Confidence 899888874 45799999999999999999999999999999999999994 678999999999975432221
Q ss_pred cccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCc
Q 011988 166 YRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 244 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 244 (473)
......||..|+|||++.+. .++.++|||||||+||||++|..||.+.. ..+.+..+........ ...++
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~---~~~~~~~i~~~~~~~~----~~~~~ 222 (330)
T cd05586 152 --TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED---TQQMYRNIAFGKVRFP----KNVLS 222 (330)
T ss_pred --CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC---HHHHHHHHHcCCCCCC----CccCC
Confidence 12346799999999999765 48999999999999999999999997643 2333444433222111 12468
Q ss_pred HHHHHHHHHHhcCCCCCCCCH
Q 011988 245 TEFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 245 ~~l~~li~~cl~~dp~~RPt~ 265 (473)
+++.++|..||..||++||++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCC
Confidence 899999999999999999954
No 164
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=7.4e-39 Score=310.14 Aligned_cols=252 Identities=21% Similarity=0.359 Sum_probs=200.3
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+..++|+++++||+|+||.||+|.+ .+++.||+|...... ...+..|+.+++.++|.+++..+ .+. .....+++|
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~-~~~-~~~~~~~v~ 79 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLY-AVV-TQEPIYIIT 79 (260)
T ss_pred cchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEE-EEE-ccCCcEEEE
Confidence 3567899999999999999999985 467889999855433 35688999999999866655544 333 345679999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|++ +++|.+++... ...+++.+++.++.|++.||+|||+.||+||||||+||+++ +++.++|+|||++..+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCCCEEEccCcceeecCCCC
Confidence 998 78999988643 34689999999999999999999999999999999999994 77899999999997765322
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.. ......++..|+|||++.+..++.++|||||||++|||++ |+.||.+... ......+..... . .
T Consensus 157 ~~------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~-~---~ 223 (260)
T cd05067 157 YT------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN---PEVIQNLERGYR-M---P 223 (260)
T ss_pred cc------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHHcCCC-C---C
Confidence 11 1123356778999999998889999999999999999998 9999987543 222222222111 1 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
....+|.++.+++.+||..+|++||++++|...|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 234578999999999999999999999999998875
No 165
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.2e-39 Score=311.86 Aligned_cols=249 Identities=20% Similarity=0.334 Sum_probs=194.7
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEe------CCe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVE------GDY 76 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~------~~~ 76 (473)
..+.|.+.+.||.|+||.||+|.+..+++.||||+.... ....+..|+.+++.+.+|+++..+..++.. ...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 357799999999999999999999999999999995433 344678899999999655555555444332 246
Q ss_pred EEEEEecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 77 NVLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
.+++|||+ +++|.+++... ...+++..++.++.||+.||.|||+++|+|+||||+||+++ .++.++|+|||++..
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~---~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC---CCCCEEEccCCCcee
Confidence 79999999 67999998753 34689999999999999999999999999999999999994 678899999999986
Q ss_pred ccCCCCccccccccCCCcccCccccccccccC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 229 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~ 229 (473)
...... ......|+..|+|||++.+ ..++.++|||||||++|||++|..||...... .....+..
T Consensus 161 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~---~~~~~~~~ 230 (272)
T cd06637 161 LDRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM---RALFLIPR 230 (272)
T ss_pred cccccc-------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH---HHHHHHhc
Confidence 543221 1234678999999999863 35788999999999999999999999764321 11111111
Q ss_pred ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 230 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 230 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.... ......++.++.++|.+||..+|.+||++.+++
T Consensus 231 ~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 267 (272)
T cd06637 231 NPAP---RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLM 267 (272)
T ss_pred CCCC---CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 1111 111235788999999999999999999988774
No 166
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.4e-38 Score=307.62 Aligned_cols=251 Identities=21% Similarity=0.294 Sum_probs=200.9
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.++|++.+.||.|+||.||+|.+..+++.+++|+.... ....+..|+.+++.++|.+.+. +..+.......+++||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~l~~e 80 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVA-YFGSYLRRDKLWIVME 80 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhc-eEEEEEeCCEEEEEEe
Confidence 36899999999999999999999889999999985433 3456889999999998665555 5556677888999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++......+++.+++.++.|++.||.|||++||+|+||||+||+++ +.+.+||+|||++..+.....
T Consensus 81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEECccccchhhhhhhh-
Confidence 99 6799999876556899999999999999999999999999999999999994 678899999999976543221
Q ss_pred cccccccCCCcccCccccccccccCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||.+... ......+...........
T Consensus 157 ------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 227 (262)
T cd06613 157 ------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP---MRALFLISKSNFPPPKLK 227 (262)
T ss_pred ------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhccCCCcccc
Confidence 12345788999999999877 789999999999999999999999976542 222222222211111111
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
....++.++.+++..||..+|.+||++.+|+.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 22346788999999999999999999988753
No 167
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5.2e-39 Score=310.88 Aligned_cols=246 Identities=20% Similarity=0.335 Sum_probs=192.4
Q ss_pred eeEeecCceEEEEEEE--cCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSGSFGEIYLGTN--IQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~--~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
++||+|+||.||+|.+ ..++..||||+..... ...+..|+.+++.+.|.+++..+. +. ..+..+++|||+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-~~-~~~~~~lv~e~~~ 78 (257)
T cd05116 1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIG-IC-EAESWMLVMELAE 78 (257)
T ss_pred CcCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEE-EE-cCCCcEEEEecCC
Confidence 3689999999999965 4567899999854332 235788999999998766555544 33 345668999998
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
+++|.+++.. ...+++..++.++.||+.||+|||++||+||||||.|||++ .++.+||+|||+++.........
T Consensus 79 ~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~~~~~~~~~~~~-- 152 (257)
T cd05116 79 LGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGLSKALGADENYY-- 152 (257)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCccccccCCCCCee--
Confidence 6789999874 45699999999999999999999999999999999999994 67889999999998765432211
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+...... .+...+
T Consensus 153 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~i~~~~~~----~~~~~~ 223 (257)
T cd05116 153 --KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG---NEVTQMIESGERM----ECPQRC 223 (257)
T ss_pred --eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHCCCCC----CCCCCC
Confidence 11122344678999999988889999999999999999998 9999976543 2233333322211 133568
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
++++.++|..||+.||++||++++|.+.|++.
T Consensus 224 ~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 224 PPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 89999999999999999999999999988865
No 168
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=9.4e-39 Score=307.76 Aligned_cols=245 Identities=20% Similarity=0.312 Sum_probs=192.5
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
+.||+|+||.||+|.+..+++.||+|...... ...+..|+++++.+.|.+++ .+..++......++||||+ +++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV-RLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcc-eEEEEEcCCCCeEEEEeeccCCc
Confidence 46999999999999999999999999854332 24578899999999865544 5555666777889999998 789
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccc
Q 011988 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167 (473)
Q Consensus 88 L~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~ 167 (473)
|.+++......+++.+++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..........
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~~----- 151 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDGVYAS----- 151 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccCcccccccccc-----
Confidence 9999875555789999999999999999999999999999999999994 67889999999997654321100
Q ss_pred cCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHH
Q 011988 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 246 (473)
Q Consensus 168 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 246 (473)
......++..|+|||.+.+..++.++|||||||++|||++ |..||...... .....+.. .... .....+|.+
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~~ 224 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ---QTREAIEQ-GVRL---PCPELCPDA 224 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH---HHHHHHHc-CCCC---CCcccCCHH
Confidence 0011123467999999999889999999999999999997 99999764331 11222211 1111 123456899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 247 FASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 247 l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
+.+++.+||..+|++||++.+|.+.|+
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 999999999999999999999988775
No 169
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.9e-38 Score=310.92 Aligned_cols=252 Identities=21% Similarity=0.226 Sum_probs=194.8
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|++.+.||+|+||.||+|++..+++.||||++... ....+..|+.+++.+.|++ +..+..+...+...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN-IVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCC-EeeeEEEEeeCCeEEEEEe
Confidence 589999999999999999999999999999985322 2345788999999998554 5555555667788899999
Q ss_pred cCCCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LLGPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~g~sL~~~l~~~~--~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+.++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||++........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 80 FLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred cCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcEEECcccceeecCCCcc
Confidence 99889999886433 5689999999999999999999999999999999999994 778999999999975533211
Q ss_pred ccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH------------
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI------------ 227 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i------------ 227 (473)
......++..|+|||++.+. .++.++|||||||++|+|++|+.||.+.............
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 157 -------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred -------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 11234678899999998764 4789999999999999999999999764321111110000
Q ss_pred ---------hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 228 ---------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 228 ---------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
...............+++++.++|.+||..||++||++.+|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 230 TSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000111112223457899999999999999999999887753
No 170
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.7e-38 Score=307.84 Aligned_cols=254 Identities=24% Similarity=0.330 Sum_probs=202.7
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc------CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK------TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~------~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||.|+||.||+|.+..+++.||+|.+.. .....+.+|+++++.++|.+.+..+ .++...+..+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~-~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYL-ASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeee-eeeecCCeEEEE
Confidence 689999999999999999999988999999997432 1234578899999999865555444 445566788999
Q ss_pred EecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 81 IDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
|||+ +++|.+++... ...+++..++.++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||++..+.
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCcEEEeccceeeecc
Confidence 9999 77999998642 34589999999999999999999999999999999999994 67889999999987654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
..... .....|+..|+|||.+.+..++.++|||||||++|+|++|..||..... ........+........
T Consensus 158 ~~~~~-------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~- 228 (267)
T cd08224 158 SKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEKCDYPPL- 228 (267)
T ss_pred CCCcc-------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-cHHHHHhhhhcCCCCCC-
Confidence 33211 1234688999999999998899999999999999999999999965432 22222222222211111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
. ...++.++.++|.+||..+|++||++.+|.+.|+++
T Consensus 229 ~--~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 229 P--ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred C--hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 1 125678999999999999999999999999999876
No 171
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.7e-40 Score=299.07 Aligned_cols=250 Identities=23% Similarity=0.322 Sum_probs=209.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.++|++++.||.|-||.||+|+.++++-.||+|++.+.. ..++.+|++|...|+|+|++ .++.++.+....|+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnil-rlY~~fhd~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNIL-RLYGYFHDSKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHH-hhhhheeccceeEE
Confidence 478999999999999999999999999999999954432 45688999999999965555 45556677788899
Q ss_pred EEecC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 80 VIDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~-~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
++||. .|.|...+.. ...+|++.....++.|++.||.|+|.++||||||||+|+|++ ..+.+||+|||.+.....
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg---~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC---CCCCeeccCCCceeecCC
Confidence 99999 7788877763 344699999999999999999999999999999999999995 788999999999865432
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
. ...+++||..|.+||+..+..++..+|+|++|++.||++.|..||.... ..+.|.+|.......
T Consensus 177 ~---------kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~---~~etYkrI~k~~~~~--- 241 (281)
T KOG0580|consen 177 N---------KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS---HSETYKRIRKVDLKF--- 241 (281)
T ss_pred C---------CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh---hHHHHHHHHHccccC---
Confidence 1 2367899999999999999999999999999999999999999998754 556666666555433
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
+..++.+..++|.+|+.++|.+|....++ +.+.++..
T Consensus 242 --p~~is~~a~dlI~~ll~~~p~~r~~l~~v---~~hpwI~a 278 (281)
T KOG0580|consen 242 --PSTISGGAADLISRLLVKNPIERLALTEV---MDHPWIVA 278 (281)
T ss_pred --CcccChhHHHHHHHHhccCccccccHHHH---hhhHHHHh
Confidence 25788999999999999999999995554 66666543
No 172
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.7e-39 Score=317.26 Aligned_cols=259 Identities=20% Similarity=0.292 Sum_probs=195.6
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCC--------------cEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCee
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN--------------EEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNL 67 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~--------------~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~ 67 (473)
.++|++.++||+|+||.||+|.+..++ ..||||+..... ...+.+|+++++.++|.+ +..+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~-i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPN-IIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCC-cCeE
Confidence 358999999999999999999875432 358999854432 235788999999998655 5555
Q ss_pred EEeeEeCCeEEEEEecC-CCCHHHHHHHcC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEE
Q 011988 68 RWFGVEGDYNVLVIDLL-GPSLEDLFNFCS-----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLM 135 (473)
Q Consensus 68 ~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~-----------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl 135 (473)
..++......+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+|||+
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 55566777889999999 789999986432 136888999999999999999999999999999999999
Q ss_pred eeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc--CCCCCC
Q 011988 136 GLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPWQ 213 (473)
Q Consensus 136 ~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt--G~~Pf~ 213 (473)
+ +++.+||+|||++........ ........++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 163 ~---~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 163 G---NHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred c---CCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 4 677899999999976543221 111223455788999999998899999999999999999988 778887
Q ss_pred CCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 214 GLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 214 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
.............................+|+.+.+|+..||..||++||++++|.+.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 235 LLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 654322111111111110000001123356899999999999999999999999988875
No 173
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-38 Score=310.28 Aligned_cols=255 Identities=16% Similarity=0.259 Sum_probs=202.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCc---EEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE---EVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~---~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
.++|++.+.||+|+||.||+|.+..++. .||+|...... ...+..|+.+++.++|+ ++..+..+....+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHP-NIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCC-CcceEEEEEecCCccE
Confidence 4689999999999999999999865543 79999854432 23578899999999855 4555666667778899
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
++|||+ +++|.+++......+++.+++.++.||+.||.|||++||+||||||+|||++ .++.++|+|||++..+..
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCeEEeCCCCccccccc
Confidence 999999 7899999986666799999999999999999999999999999999999994 678999999999987654
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
..... .......++..|++||.+.+..++.++|||||||++||+++ |..||.+.... +....+..... .
T Consensus 159 ~~~~~----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---~~~~~~~~~~~-~-- 228 (267)
T cd05066 159 DPEAA----YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---DVIKAIEEGYR-L-- 228 (267)
T ss_pred cccee----eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---HHHHHHhCCCc-C--
Confidence 32211 01122334568999999999889999999999999999886 99999775432 22333322211 1
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
.....+|+.+.+++.+||+.+|++||++.++.+.|+++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 -PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11245789999999999999999999999999998875
No 174
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.1e-38 Score=313.04 Aligned_cols=259 Identities=21% Similarity=0.273 Sum_probs=196.5
Q ss_pred CCce-EEEeeEeecCceEEEEEEE----cCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEe-CC
Q 011988 6 GNKF-RLGRKIGSGSFGEIYLGTN----IQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVE-GD 75 (473)
Q Consensus 6 ~~~y-~i~~~LG~G~fG~Vy~a~~----~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~-~~ 75 (473)
.++| ++.+.||.|+||+||++.. ..++..||+|+..... ...+.+|+++++.++|.+++..+..+... ..
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 3555 9999999999999988653 3567899999865432 34577899999999866666555444333 45
Q ss_pred eEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
..+++|||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~ 156 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKA 156 (283)
T ss_pred eEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEeecccccc
Confidence 678999998 7899999874 4599999999999999999999999999999999999994 678999999999987
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHH-----------H
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ-----------K 223 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~-----------~ 223 (473)
+....... .......++..|+|||.+.+..++.++|||||||++|||++|..||.......... .
T Consensus 157 ~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05080 157 VPEGHEYY----RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVR 232 (283)
T ss_pred cCCcchhh----ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhh
Confidence 65432111 11122345677999999998889999999999999999999999986533210000 0
Q ss_pred HHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 224 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 224 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
........... .....+|.++.+++..||+.+|++||++++|.+.|+++.
T Consensus 233 ~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 233 LIELLERGMRL---PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhcCCCC---CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00000000000 112457899999999999999999999999999998763
No 175
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.2e-39 Score=316.56 Aligned_cols=252 Identities=20% Similarity=0.236 Sum_probs=198.7
Q ss_pred CceEEEeeEeecCceEEEEEEEcCC-----CcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
.+|++.++||.|+||.||+|.+..+ ++.||||+...... ..+..|+.++..++|++++ .+..+.......
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv-~~~~~~~~~~~~ 83 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIV-CLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcC-eEEEEEcCCCce
Confidence 4688899999999999999987543 57899999654332 3477899999999865555 455556666778
Q ss_pred EEEEecC-CCCHHHHHHHc---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCC
Q 011988 78 VLVIDLL-GPSLEDLFNFC---------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 141 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~---------------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 141 (473)
+++++|+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+. ++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~---~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF---DK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---CC
Confidence 9999998 78999988522 13478899999999999999999999999999999999994 67
Q ss_pred CcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCH
Q 011988 142 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTK 220 (473)
Q Consensus 142 ~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~ 220 (473)
+.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--- 232 (283)
T cd05091 161 LNVKISDLGLFREVYAADYY-----KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--- 232 (283)
T ss_pred CceEecccccccccccchhe-----eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 78999999999865432211 11123456789999999998889999999999999999998 8899977433
Q ss_pred HHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 221 KQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 221 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
.+.+..+...... .....+|.++.+++..||+.+|++||++.+|...|+.
T Consensus 233 ~~~~~~i~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 QDVIEMIRNRQVL----PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 3344444433322 2345789999999999999999999999999988763
No 176
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-38 Score=316.83 Aligned_cols=259 Identities=17% Similarity=0.301 Sum_probs=204.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEc-------CCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNI-------QTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVE 73 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~-------~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~ 73 (473)
..++|.+.+.||+|+||.||+|++. ..+..||+|+..... ...+..|+.+++.+..|++|..+..+...
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 4578999999999999999999753 234579999854322 34578999999999556666666666777
Q ss_pred CCeEEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEee
Q 011988 74 GDYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 137 (473)
Q Consensus 74 ~~~~~lv~e~~-g~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~ 137 (473)
....+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||++
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~- 171 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT- 171 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc-
Confidence 78889999999 779999987532 2478889999999999999999999999999999999994
Q ss_pred CCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCC
Q 011988 138 GRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLK 216 (473)
Q Consensus 138 ~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~ 216 (473)
.++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||+||||++ |..||.+..
T Consensus 172 --~~~~~kl~D~g~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 172 --ENNVMKIADFGLARDVNNIDYYK-----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred --CCCcEEECCCccceecccccccc-----cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 67899999999998764432211 1123345678999999999889999999999999999998 889997643
Q ss_pred CCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 217 AGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 217 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
..+....+...... .....++.++.+++..||..+|++||++.+|.+.|++++.-
T Consensus 245 ---~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 245 ---VEELFKLLKEGHRM----DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred ---HHHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 23333333222211 12346789999999999999999999999999999998754
No 177
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-38 Score=319.06 Aligned_cols=260 Identities=18% Similarity=0.303 Sum_probs=204.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCC-------CcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-------NEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-------~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~ 74 (473)
..+|++.+.||+|+||.||+|.+... +..||+|+..... ...+..|+.+++.+..|++|..+..++...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 45799999999999999999986432 2368999854322 245788999999996566666676667777
Q ss_pred CeEEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeC
Q 011988 75 DYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 138 (473)
Q Consensus 75 ~~~~lv~e~~-g~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~ 138 (473)
...+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~-- 168 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT-- 168 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc--
Confidence 7889999999 779999987421 2478889999999999999999999999999999999995
Q ss_pred CCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCC
Q 011988 139 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA 217 (473)
Q Consensus 139 ~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~ 217 (473)
.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||+||||++ |..||.+...
T Consensus 169 -~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 169 -EDNVMKIADFGLARDVHNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred -CCCcEEECCcccceeccccccc-----ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 6789999999999866442211 11122344578999999999999999999999999999998 8999977432
Q ss_pred CCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 218 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 218 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
...+..+...... .....++.++.+++..||..+|++||++.+|++.|+.++....
T Consensus 243 ---~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 243 ---EELFKLLKEGHRM----DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred ---HHHHHHHHcCCCC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 2233333222111 1234578899999999999999999999999999999886554
No 178
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1e-38 Score=307.96 Aligned_cols=245 Identities=21% Similarity=0.254 Sum_probs=198.3
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
+|++.++||.|+||.||++.+..+++.||+|.+... ....+..|+.+++.++|.+ +..+..++......+++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPN-IVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCC-cceEEEEEEECCEEEEEEee
Confidence 589999999999999999999999999999985332 2345778999999998655 45555566778899999999
Q ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 84 L-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 84 ~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++ +.+.++|+|||++........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~~~~~- 155 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT---QNGKVKLGDFGSARLLTSPGA- 155 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC---CCCcEEEcccCcceeeccccc-
Confidence 9 78999988643 34589999999999999999999999999999999999994 778999999999976644321
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
......|+..|+|||++.+..++.++|||||||++|+|++|..||.... ....+..+...... .+..
T Consensus 156 ------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~---~~~~~~~~~~~~~~----~~~~ 222 (255)
T cd08219 156 ------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS---WKNLILKVCQGSYK----PLPS 222 (255)
T ss_pred ------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC---HHHHHHHHhcCCCC----CCCc
Confidence 1134578999999999999889999999999999999999999997633 22223333222211 1234
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.++.++.++|.+||+.||++||++.+|..
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 57889999999999999999999988854
No 179
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.1e-38 Score=310.42 Aligned_cols=260 Identities=18% Similarity=0.252 Sum_probs=205.0
Q ss_pred CCCccCCceEEEeeEeecCceEEEEEEEcCCCc----EEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeE
Q 011988 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGV 72 (473)
Q Consensus 1 m~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~ 72 (473)
|.....++|++.+.||+|+||.||+|.+..+++ .||+|+...... ..+.+|+.+++.+.|.+++..+..+ .
T Consensus 1 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 79 (279)
T cd05057 1 LRILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGIC-L 79 (279)
T ss_pred CcccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-e
Confidence 345567889999999999999999999877665 589998554432 3577899999999876666555443 3
Q ss_pred eCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCC
Q 011988 73 EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 151 (473)
Q Consensus 73 ~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 151 (473)
. ...+++|||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+
T Consensus 80 ~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kL~dfg~ 155 (279)
T cd05057 80 S-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---TPQHVKITDFGL 155 (279)
T ss_pred c-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---CCCeEEECCCcc
Confidence 3 6778899988 8899999986666799999999999999999999999999999999999994 678899999999
Q ss_pred cccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhc
Q 011988 152 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEK 230 (473)
Q Consensus 152 a~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~ 230 (473)
++......... ......++..|+|||.+.+..++.++|||||||++||+++ |..||.+.... +....+...
T Consensus 156 ~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~ 227 (279)
T cd05057 156 AKLLDVDEKEY-----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EIPDLLEKG 227 (279)
T ss_pred cccccCcccce-----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHHhCC
Confidence 98765332211 0112234678999999988889999999999999999998 99999875432 222222221
Q ss_pred cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 231 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 231 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
.. . .....++.++.+++..||..+|.+||++.+|.+.|.+++.
T Consensus 228 ~~-~---~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 228 ER-L---PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CC-C---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11 1 1123467899999999999999999999999999999875
No 180
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.3e-38 Score=308.51 Aligned_cols=251 Identities=23% Similarity=0.401 Sum_probs=198.6
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
..++|.+.++||+|+||.||+|.+..+ ..||+|...... ...+.+|+++++.+.|+++++.+..+ .....+++||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--~~~~~~~v~e 80 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVV--SEEPIYIVTE 80 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEE--cCCCcEEEEE
Confidence 347899999999999999999987544 468999854332 34578899999999987777665443 3456789999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ...+++..+..++.||+.||.|||+.||+|+||||+|||++ +++.++|+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---DNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCeEEECCCccceEccCCcc
Confidence 99 67999999753 33589999999999999999999999999999999999994 778999999999976543221
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... ......+.... .. ..
T Consensus 158 ------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~~-~~---~~ 224 (260)
T cd05069 158 ------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN---REVLEQVERGY-RM---PC 224 (260)
T ss_pred ------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCC-CC---CC
Confidence 11123356778999999998889999999999999999999 9999987543 22223332211 11 12
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
...+|..+.+++.+||..||++||++++|.+.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 34678999999999999999999999999998874
No 181
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.5e-38 Score=307.78 Aligned_cols=249 Identities=25% Similarity=0.348 Sum_probs=198.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
++|.+.+.||.|+||.||+|.+..+++.||||...... ...+..|+.+++.+.|++ |..+..+....+..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHER-IVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCC-eeeeEEEEccCCeEE
Confidence 57999999999999999999999999999999854321 235778999999998555 445555666777999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+++|++ +++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||+++.+..
T Consensus 81 ~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 81 IFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccceeccc
Confidence 999999 7899999874 34689999999999999999999999999999999999994 678899999999976543
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+..... ..
T Consensus 157 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~---~~ 226 (263)
T cd06625 157 ICSSG----TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA---MAAIFKIATQPT---NP 226 (263)
T ss_pred ccccc----ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch---HHHHHHHhccCC---CC
Confidence 21110 001235688899999999998999999999999999999999999976432 222222221111 12
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.+...++.++.++|..||..+|++||++.+|++
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 227 QLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 234567899999999999999999999888754
No 182
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.7e-38 Score=304.57 Aligned_cols=245 Identities=24% Similarity=0.297 Sum_probs=199.4
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|.+.+.||+|+||.||+|.+..+++.|++|.+... ....+..|+++++.++|++++.. ..++......+++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~-~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRY-YESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehh-eeeeccCCEEEEEEE
Confidence 589999999999999999999999999999985332 23457789999999986655554 445566778899999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||+++.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEcccccceeccCccc
Confidence 98 88999998754 45789999999999999999999999999999999999995 678999999999987654322
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
. .....|+..|+|||++.+..++.++|||||||++|+|++|+.||.... .......+....... +.
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~----~~ 222 (256)
T cd08529 157 F-------ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN---QGALILKIIRGVFPP----VS 222 (256)
T ss_pred h-------hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCCCCC----Cc
Confidence 1 134578899999999999889999999999999999999999997643 233333333322211 22
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..++.++.+++.+||+.+|++||++.+|.+
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 357899999999999999999999888754
No 183
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.3e-38 Score=307.18 Aligned_cols=246 Identities=20% Similarity=0.269 Sum_probs=198.5
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.|++.+.||.|+||.||++.+..+++.||||.+.... ...+..|+.+++.++|.+++..+..+.......+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 5999999999999999999999999999999854322 23577899999999877766655555445567899999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ...+++.+++.++.||+.||.|||++||+|+||||+||+++ ..+.++|+|||++..+.....
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEEecccceEEecccCC
Confidence 99 78999988753 34589999999999999999999999999999999999994 678999999999987643321
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||.... .......+...... .+.
T Consensus 158 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~---~~~~~~~~~~~~~~----~~~ 223 (257)
T cd08223 158 -------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD---MNSLVYRIIEGKLP----PMP 223 (257)
T ss_pred -------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHhcCCC----CCc
Confidence 1234578999999999999999999999999999999999999997543 22222223222221 123
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..+++++.+++.+||+.+|++||++.++++
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 467899999999999999999999887753
No 184
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=9.8e-39 Score=309.10 Aligned_cols=249 Identities=18% Similarity=0.268 Sum_probs=198.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
.++|++.+.||+|+||.||+|.+. .+..||||.+.... ...+..|+.+++.++|+ +|..+..++......+++|||
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHE-KLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCC-CeeeEEEEEccCCCcEEEEEc
Confidence 357999999999999999999864 34569999854432 35688999999999854 555666666777788999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 84 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
+ +++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||+++.......
T Consensus 81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~~~~~~~~-- 155 (256)
T cd05113 81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKVSDFGLSRYVLDDEY-- 155 (256)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEECCCccceecCCCce--
Confidence 9 7899999976555799999999999999999999999999999999999994 678999999999986543321
Q ss_pred ccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
.......++..|++||.+.+..++.++|||||||++|||++ |..||..... ......+....... ...
T Consensus 156 ----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~~----~~~ 224 (256)
T cd05113 156 ----TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---SETVEKVSQGLRLY----RPH 224 (256)
T ss_pred ----eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHhcCCCCC----CCC
Confidence 11123346678999999998889999999999999999998 9999976543 22233333222111 123
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
..+.++.+++..||..+|++||++.+|++.|
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 225 LASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 4578999999999999999999999997765
No 185
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-41 Score=336.71 Aligned_cols=241 Identities=22% Similarity=0.314 Sum_probs=203.2
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.|.-++.||.|+||.||.|++..+.+.||||.+.-. +..++.+|+++|+.|.|++.| .+.+|+......|+||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPnti-eYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTI-EYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcc-cccceeeccchHHHHH
Confidence 366678999999999999999999999999984322 345689999999999966555 5677778888889999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|||-|+-.|++.-..+++-+.++..|+.+.+.||.|||+.+.||||||..|||++ +.+.|||+|||.|.....
T Consensus 106 EYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs---e~g~VKLaDFGSAsi~~P---- 178 (948)
T KOG0577|consen 106 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS---EPGLVKLADFGSASIMAP---- 178 (948)
T ss_pred HHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec---CCCeeeeccccchhhcCc----
Confidence 9999999999998888999999999999999999999999999999999999995 889999999999975533
Q ss_pred cccccccCCCcccCcccccccccc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 162 QHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.+.|+||+.|||||+++ .+.|+-++||||||++..||...++|+..+++..... .|.....++..
T Consensus 179 -------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY---HIAQNesPtLq-- 246 (948)
T KOG0577|consen 179 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIAQNESPTLQ-- 246 (948)
T ss_pred -------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH---HHHhcCCCCCC--
Confidence 35789999999999987 4569999999999999999999999998887644332 22222222211
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
...++..|..|+..||.+-|.+|||.++|+
T Consensus 247 -s~eWS~~F~~Fvd~CLqKipqeRptse~ll 276 (948)
T KOG0577|consen 247 -SNEWSDYFRNFVDSCLQKIPQERPTSEELL 276 (948)
T ss_pred -CchhHHHHHHHHHHHHhhCcccCCcHHHHh
Confidence 234678999999999999999999988773
No 186
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-38 Score=315.81 Aligned_cols=259 Identities=19% Similarity=0.311 Sum_probs=203.7
Q ss_pred CCceEEEeeEeecCceEEEEEEEcC-------CCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-------TNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEG 74 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-------~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~ 74 (473)
.++|.+.++||+|+||.||+|++.. ....||+|+...... ..+..|+.+++.+..|++|..+..++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 4689999999999999999998642 345799998554322 34678999999996566777776677777
Q ss_pred CeEEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeC
Q 011988 75 DYNVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG 138 (473)
Q Consensus 75 ~~~~lv~e~~-g~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~ 138 (473)
...+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||++||+||||||+|||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~-- 168 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT-- 168 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc--
Confidence 8889999999 789999987432 3488999999999999999999999999999999999994
Q ss_pred CCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCC
Q 011988 139 RRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA 217 (473)
Q Consensus 139 ~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~ 217 (473)
.++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 169 -~~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 169 -EDNVMKIADFGLARGVHDIDYYK-----KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred -CCCcEEEcccccccccccccccc-----ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 67889999999998664322111 0112234567999999999889999999999999999999 8999976432
Q ss_pred CCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 218 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 218 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
...+..+...... .....++.++.+++..||..+|++||++.++.+.|.++....
T Consensus 243 ---~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 243 ---EELFKLLREGHRM----DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred ---HHHHHHHHcCCCC----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 2223333222111 123467889999999999999999999999999999887543
No 187
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-38 Score=328.72 Aligned_cols=256 Identities=25% Similarity=0.326 Sum_probs=200.9
Q ss_pred CceEEEeeEeecCceEEEEEEEc-----CCCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
++|.+.++||+|+||.||+|++. .+++.||||++..... ..+..|++++..+..|++|..+..++......
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 46888999999999999999864 3456899999654322 25778999999998566666666677777788
Q ss_pred EEEEecC-CCCHHHHHHHcC------------------------------------------------------------
Q 011988 78 VLVIDLL-GPSLEDLFNFCS------------------------------------------------------------ 96 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~------------------------------------------------------------ 96 (473)
++||||+ +++|.+++....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 9999999 889999986432
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCC
Q 011988 97 -------------------------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 139 (473)
Q Consensus 97 -------------------------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~ 139 (473)
..+++..++.|+.||+.||+|||+++|+||||||+|||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~--- 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC--- 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe---
Confidence 1367778899999999999999999999999999999995
Q ss_pred CCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCC
Q 011988 140 RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAG 218 (473)
Q Consensus 140 ~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~ 218 (473)
+.+.+||+|||+++.+...... .......++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNY-----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred CCCEEEEEecCcceeccccccc-----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 6788999999999865432211 11123467889999999999889999999999999999998 89999765322
Q ss_pred CHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 219 TKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 219 ~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
. .....+.. .... .....++.++.+|+..||..+|.+||++.+|++.|+.++
T Consensus 349 ~--~~~~~~~~-~~~~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 E--QFYNAIKR-GYRM---AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred H--HHHHHHHc-CCCC---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1 11121211 1111 123457899999999999999999999999999999875
No 188
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.3e-38 Score=314.91 Aligned_cols=259 Identities=18% Similarity=0.265 Sum_probs=195.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEcC----------------CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQ----------------TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIP 65 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~----------------~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~ 65 (473)
.++|++.++||+|+||.||++.+.. ++..||+|+..... ...+..|+.+++.++|.+ +.
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPN-II 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC-cc
Confidence 4679999999999999999986432 34468999865432 245788999999998654 55
Q ss_pred eeEEeeEeCCeEEEEEecC-CCCHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEE
Q 011988 66 NLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS----------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFL 134 (473)
Q Consensus 66 ~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~----------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NIL 134 (473)
.+..++......+++|||+ +++|.+++.... ..+++.+++.++.||+.||+|||++||+||||||+|||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 5555667777889999999 789999987432 23778899999999999999999999999999999999
Q ss_pred EeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc--CCCCC
Q 011988 135 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPW 212 (473)
Q Consensus 135 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt--G~~Pf 212 (473)
++ .++.++|+|||+++.+...... .......++..|++||...+..++.++|||||||++|||++ |..||
T Consensus 163 i~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~ 234 (296)
T cd05095 163 VG---KNYTIKIADFGMSRNLYSGDYY-----RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPY 234 (296)
T ss_pred Ec---CCCCEEeccCcccccccCCcce-----eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCc
Confidence 95 6788999999999865432211 11122345678999999988889999999999999999998 78999
Q ss_pred CCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 213 QGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 213 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
..............................+|+.+.+++..||..||++||++.+|.+.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 235 SQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred cccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 7654322111111111000000000112457899999999999999999999999998875
No 189
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2e-38 Score=308.25 Aligned_cols=256 Identities=16% Similarity=0.233 Sum_probs=201.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCc---EEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNE---EVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~---~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
..++|+..+.||+|+||.||+|.+..++. .||||...... ...+..|+.+++.+.|++ +..+..+....+..
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~ 81 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN-IIRLEGVVTKFKPA 81 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCC-eeEEEEEEccCCCc
Confidence 34689999999999999999999876554 79999854432 345778999999998665 55556666777788
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+++|||+ +++|.+++......+++..++.++.|++.||+|||+.||+|+||||+|||++ .++.+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCcEEECCCccceecc
Confidence 9999999 7799999976666799999999999999999999999999999999999994 67889999999997664
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
....... .......+..|+|||++.+..++.++|||||||++|||++ |..||..... ......+.......
T Consensus 159 ~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~~~~~~i~~~~~~~- 230 (268)
T cd05063 159 DDPEGTY----TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---HEVMKAINDGFRLP- 230 (268)
T ss_pred cccccce----eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHHhcCCCCC-
Confidence 4322110 0111233567999999998889999999999999999997 9999976432 22333332211111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
....++.++.+++.+||..+|++||++.+|.+.|+++
T Consensus 231 ---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 231 ---APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1235789999999999999999999999999999876
No 190
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.7e-38 Score=311.40 Aligned_cols=256 Identities=21% Similarity=0.325 Sum_probs=198.9
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGD 75 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~ 75 (473)
..++|++.++||+|+||.||+|.+.. .+..||+|....... ..+..|+.+++.+.|+ +|..+..+.....
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCC-CeeeEEEEEcCCC
Confidence 45789999999999999999997642 345799998543332 2366788899999855 5555666666777
Q ss_pred eEEEEEecC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEE
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVY 145 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~---------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vk 145 (473)
..+++|||+ +++|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++ .++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCcEE
Confidence 889999999 889999997432 2356788999999999999999999999999999999995 678999
Q ss_pred EEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHH
Q 011988 146 IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKY 224 (473)
Q Consensus 146 L~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~ 224 (473)
|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+.+
T Consensus 160 L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~---~~~~ 231 (288)
T cd05061 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---EQVL 231 (288)
T ss_pred ECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHH
Confidence 999999986543221 111123345778999999998889999999999999999998 8899976432 2222
Q ss_pred HHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 225 EKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 225 ~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
..+..... ......+++++.+++..||+.||++||++.++.+.|++.+
T Consensus 232 ~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 232 KFVMDGGY----LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHcCCC----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 22222111 1123456899999999999999999999999998888765
No 191
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.3e-38 Score=312.12 Aligned_cols=250 Identities=20% Similarity=0.236 Sum_probs=194.9
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|++.+.||.|+||.||+|.+..+|+.||+|.+.... ...+..|+.+++.++|++++. +..+.......++++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR-LYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeee-HHHHhccCCceEEEEe
Confidence 5999999999999999999999999999999854321 234678999999998665554 4445566778899999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 83 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 83 ~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
|++++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.+.....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~-- 154 (284)
T cd07839 80 YCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPVR-- 154 (284)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEECccchhhccCCCCC--
Confidence 999999998876666799999999999999999999999999999999999994 678999999999986543221
Q ss_pred ccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc---------
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV--------- 232 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--------- 232 (473)
......++..|+|||++.+.. ++.++|||||||++|||++|..||..... ....+..+.....
T Consensus 155 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07839 155 -----CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEESWPG 227 (284)
T ss_pred -----CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCC--HHHHHHHHHHHhCCCChHHhHH
Confidence 112346788999999988754 79999999999999999999988643221 1222222111000
Q ss_pred ---------------cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 233 ---------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 233 ---------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..........+++++.++|.+||..||.+|||++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 228 VSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00011223457889999999999999999999888753
No 192
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.1e-39 Score=311.65 Aligned_cols=251 Identities=22% Similarity=0.349 Sum_probs=202.9
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
-..+|++.++||.|+||.||+|.+.. +..|++|++.... ...+..|+.+++.++|.+++ .+..+.......+++|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLI-SLFAVCSVGEPVYIIT 81 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchh-heeeeEecCCCeEEEE
Confidence 34679999999999999999999876 8899999955443 35688899999999865544 4555566777889999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccchhhcCCcc
Confidence 999 77999999743 34689999999999999999999999999999999999995 67899999999998764432
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.. .....++..|++||.+.+..++.++|||||||++|+|++ |..||.+... .+.+..+..... . .
T Consensus 159 ~~-------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~-~---~ 224 (261)
T cd05148 159 YL-------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVYDQITAGYR-M---P 224 (261)
T ss_pred cc-------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHHhCCc-C---C
Confidence 11 123356778999999998889999999999999999998 8999977542 233333332211 1 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
....+++++.++|..||..||++||++.+|.+.|+.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 225 CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 235678999999999999999999999999998875
No 193
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.3e-38 Score=310.24 Aligned_cols=251 Identities=20% Similarity=0.244 Sum_probs=195.2
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe-----
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY----- 76 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~----- 76 (473)
++|++.+.||+|+||.||+|.+..+++.||||+.... ....+..|+.+++.+.+++++..+..+......
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 5799999999999999999999999999999984332 224578899999999877777766665554443
Q ss_pred EEEEEecCCCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 77 NVLVIDLLGPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
.+++|||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++ ...+.+||+|||++
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~--~~~~~~kl~dfg~~ 158 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVD--KQKGLLKIADLGLG 158 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEe--cCCCeEEEeecccc
Confidence 7999999988999988643 23589999999999999999999999999999999999995 23789999999999
Q ss_pred ccccCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 231 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 231 (473)
+.+..... ......++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.... ..+.++....
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~ 228 (295)
T cd07837 159 RAFSIPVK-------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL---QQLLHIFKLL 228 (295)
T ss_pred eecCCCcc-------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHHHh
Confidence 86543211 1122356889999998875 45799999999999999999999999764332 1121111100
Q ss_pred -----------------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 -----------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 -----------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
....+....+.+++++.++|..||..||.+||++.+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil 289 (295)
T cd07837 229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAAL 289 (295)
T ss_pred CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHh
Confidence 01112222346789999999999999999999987774
No 194
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.3e-38 Score=308.27 Aligned_cols=257 Identities=15% Similarity=0.239 Sum_probs=200.9
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCc---EEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE---EVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~---~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
.+.|++.+.||.|+||.||+|.+..+++ .||||+..... ...+..|+.+++.+.|+++ ..+..+...+...+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~ 81 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI-IHLEGVVTKSRPVM 81 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCc-ceEEEEECCCCceE
Confidence 4579999999999999999999877664 59999865432 2357889999999986554 45555666777889
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
++|||+ +++|.+++......+++.+++.++.|++.||.|||++|++|+||||+|||++ .++.+||+|||++..+..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~---~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc---CCCcEEECCCcccccccc
Confidence 999999 6799999986666799999999999999999999999999999999999994 678999999999976544
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
..... .+........+..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+.... ..
T Consensus 159 ~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~---~~~~~~i~~~~-~~-- 230 (269)
T cd05065 159 DTSDP--TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVINAIEQDY-RL-- 230 (269)
T ss_pred Ccccc--ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH---HHHHHHHHcCC-cC--
Confidence 22111 0111111122457999999999899999999999999999886 9999976543 22223322211 11
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
.....+|..+.+++..||..+|++||++.+|...|+.+
T Consensus 231 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 -PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11246789999999999999999999999999988765
No 195
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1e-38 Score=310.00 Aligned_cols=255 Identities=25% Similarity=0.324 Sum_probs=202.4
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||.|+||.||+|.+..+++.||||..... ....+..|+.+++.+.|.+++. +..++...+..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK-YYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhh-hhheeEeCCeEEEE
Confidence 5799999999999999999999899999999974332 1235778999999998655554 44555667788999
Q ss_pred EecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 81 IDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||++..+.
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEECcchhhhccc
Confidence 9999 77999988642 34589999999999999999999999999999999999994 67889999999988664
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
..... .....|+..|+|||.+.+..++.++|||||||++|+|++|..||.+.... .......+........
T Consensus 158 ~~~~~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~- 228 (267)
T cd08229 158 SKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQCDYPPL- 228 (267)
T ss_pred cCCcc-------cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHhhhhhcCCCCCC-
Confidence 43221 12357889999999999888999999999999999999999999764321 1222222222111110
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
....+++++.+++.+||..||++|||+.+|.+.+.++.
T Consensus 229 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 229 --PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred --CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 11346789999999999999999999999999988763
No 196
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.6e-38 Score=307.85 Aligned_cols=251 Identities=22% Similarity=0.375 Sum_probs=198.6
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
..++|++.++||+|+||.||+|.+. .+..||+|..... ....+.+|+.+++.++|.+++..+..+ .....+++||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~--~~~~~~lv~e 80 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVV--SEEPIYIVTE 80 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEE--CCCCcEEEEE
Confidence 4578999999999999999999864 5667999985443 235688999999999977666655443 3345789999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++ +++.++|+|||++..+.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCceeeeeccCccc
Confidence 99 78999998743 34589999999999999999999999999999999999995 678899999999986543221
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... ......+... ... ..
T Consensus 158 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~-~~~---~~ 224 (260)
T cd05070 158 T------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---REVLEQVERG-YRM---PC 224 (260)
T ss_pred c------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcC-CCC---CC
Confidence 1 1122345678999999998889999999999999999999 9999977543 2222322221 111 12
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
...++.++.+++.+||..+|++||++.++.++|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 34678999999999999999999999999988874
No 197
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.4e-38 Score=307.69 Aligned_cols=248 Identities=22% Similarity=0.301 Sum_probs=197.7
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
.+|++.+.||+|+||.||+|.+. ++..+|||+..+. ....+..|+.+++.++|.+ +..+..++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPN-LVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCC-EEEEEEEEcCCCceEEEEecC
Confidence 56899999999999999999875 5668999986543 2346788999999998654 555566667777889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+++...+....
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~~~~~~~~~~-- 156 (256)
T cd05059 82 ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLARYVLDDQYT-- 156 (256)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEECCcccceeccccccc--
Confidence 8899999876556789999999999999999999999999999999999994 6788999999999765432211
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 242 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 242 (473)
......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+..... ......
T Consensus 157 ----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~~~ 225 (256)
T cd05059 157 ----SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN---SEVVESVSAGYR----LYRPKL 225 (256)
T ss_pred ----ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH---HHHHHHHHcCCc----CCCCCC
Confidence 1112234568999999999899999999999999999999 8999976433 222333322111 112245
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 243 YPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 243 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
+|.++.+++.+||..+|++||++.++.+.|
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 789999999999999999999999998765
No 198
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.7e-38 Score=311.28 Aligned_cols=243 Identities=20% Similarity=0.294 Sum_probs=190.4
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|++.+.||+|+||.||+|.+..+++.||||+..... ...+..|+++++.+.|++++.. ..++...+..+++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~-~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGF-YGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeE-EEEEEECCEEEEEEe
Confidence 47899999999999999999999999999999854432 2347789999999986555544 445566778899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|..+ ..+++..+..++.||+.||.|||++||+|+||||+|||++ .++.++|+|||++..+....
T Consensus 80 ~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 80 FMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred cCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEeeCCcceeccccc--
Confidence 99 6666543 2478899999999999999999999999999999999994 77899999999998664332
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHH----HHHHHHhhccccccHH
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK----QKYEKISEKKVSTSIE 237 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~----~~~~~i~~~~~~~~~~ 237 (473)
.....||..|+|||++.+..++.++|||||||++|+|++|+.||......... .....+.......
T Consensus 150 -------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--- 219 (279)
T cd06619 150 -------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV--- 219 (279)
T ss_pred -------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC---
Confidence 13457899999999999989999999999999999999999999754322111 1111111111000
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.....+++++.++|.+||..+|++||+++++.+
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 012346789999999999999999999887743
No 199
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-40 Score=301.16 Aligned_cols=264 Identities=18% Similarity=0.208 Sum_probs=201.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcCCCCCCeeEEe----eEeCCeEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIPNLRWF----GVEGDYNV 78 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~~~~i~~~~~~----~~~~~~~~ 78 (473)
+++|+|.++||+|||+-||++++..++..||+|.+... ..+...+|++..+++++++.+..+.+. .......|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 57899999999999999999999999999999984333 345578999999999987776655322 22445678
Q ss_pred EEEecC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhCC--CcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 79 LVIDLL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~---~~ls~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
|+++|. .|+|.+.+.... ..+++.+++.|+.+|++||++||+.. +.||||||.|||++ +.+.++|.|||.+
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPVLMDLGSA 176 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceEEEeccCc
Confidence 888887 889999987543 35999999999999999999999998 99999999999996 5799999999999
Q ss_pred ccccCCCC--ccccccccCCCcccCccccccccccC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH
Q 011988 153 KRYRDTAT--HQHIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 153 ~~~~~~~~--~~~~p~~~~~~~~Gt~~Y~APE~~~~---~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i 227 (473)
+...-... .+.....+......|..|.|||.+.- ...+.++|||||||+||+|+.|..||...-.... .....+
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg-SlaLAv 255 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG-SLALAV 255 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC-eEEEee
Confidence 86543211 11111222334567999999999874 4478999999999999999999999954211000 000001
Q ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 228 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
....+..+. ...+++.+.++|+.||+.||.+||+..+|+..++++.
T Consensus 256 ~n~q~s~P~---~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 256 QNAQISIPN---SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eccccccCC---CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111111111 1237899999999999999999999999999888764
No 200
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.6e-38 Score=309.42 Aligned_cols=252 Identities=19% Similarity=0.309 Sum_probs=195.2
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEee-----EeCCe
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFG-----VEGDY 76 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~-----~~~~~ 76 (473)
...++|++.+.||+|+||.||+|.+..+++.||+|+..... ...+..|+.+++.+..|+++..+..++ ..+..
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 94 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ 94 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence 45689999999999999999999999999999999854422 356788999999996455555554443 23467
Q ss_pred EEEEEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 77 NVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
.+++|||+ +++|.+++.. ....+++..++.++.|++.||.|||+++|+||||||+||+++ ..+.+||+|||++
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~ 171 (286)
T cd06638 95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGGVKLVDFGVS 171 (286)
T ss_pred EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCCEEEccCCce
Confidence 89999999 8899998753 234689999999999999999999999999999999999995 6778999999999
Q ss_pred ccccCCCCccccccccCCCcccCccccccccccC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i 227 (473)
+.+..... ......|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..+
T Consensus 172 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~---~~~~~~ 241 (286)
T cd06638 172 AQLTSTRL-------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM---RALFKI 241 (286)
T ss_pred eecccCCC-------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh---HHHhhc
Confidence 86643221 1123468999999999853 34788999999999999999999999765432 112121
Q ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 228 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..... ........++.++.++|.+||+.||++||++.+|++
T Consensus 242 ~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 242 PRNPP--PTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred cccCC--CcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11110 011112346789999999999999999999888854
No 201
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.2e-38 Score=312.34 Aligned_cols=248 Identities=20% Similarity=0.339 Sum_probs=196.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeE------eCCeE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGV------EGDYN 77 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~------~~~~~ 77 (473)
.+.|++.+.||.|+||.||+|.+..+++.||+|+.... ....+..|+.+++.+.+|+++..+..++. .....
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 47899999999999999999999999999999985443 34567889999999976677666655543 35678
Q ss_pred EEEEecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 78 VLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
+++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++ +.+.++|+|||++...
T Consensus 95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~---~~~~~~l~dfg~~~~~ 171 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQL 171 (282)
T ss_pred EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCcchhhh
Confidence 9999999 66999998753 34588999999999999999999999999999999999994 6788999999998765
Q ss_pred cCCCCccccccccCCCcccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 230 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 230 (473)
..... ......|+..|+|||++. +..++.++|||||||++|||++|..||..... ...+..+...
T Consensus 172 ~~~~~-------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~---~~~~~~~~~~ 241 (282)
T cd06636 172 DRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP---MRALFLIPRN 241 (282)
T ss_pred hcccc-------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH---HhhhhhHhhC
Confidence 43211 123457899999999986 34578899999999999999999999976432 1222222211
Q ss_pred cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
... ......++.++.++|.+||..||.+||++.+|+
T Consensus 242 ~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell 277 (282)
T cd06636 242 PPP---KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLL 277 (282)
T ss_pred CCC---CCcccccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence 111 112245789999999999999999999988874
No 202
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.5e-38 Score=306.38 Aligned_cols=252 Identities=18% Similarity=0.261 Sum_probs=193.8
Q ss_pred eeEeecCceEEEEEEEcC---CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSGSFGEIYLGTNIQ---TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~---~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
+.||+|+||.||+|.+.. .+..||||...... ...+..|+.+++.++|++.+..+..+...+...+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998754 34579999854322 2356789999999987777776665555566778999998
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
+++|.+++......+++..++.++.||+.||.|||+.+|+||||||+|||++ ..+.+||+|||+++.........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~dfg~~~~~~~~~~~~-- 155 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVADFGLARDIYDKEYYS-- 155 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCccccccccCCccee--
Confidence 7899999986555678888999999999999999999999999999999994 67889999999998654322111
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG-SLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG-~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
........++..|+|||.+.+..++.++|||||||++|||++| ..||..... ......+...... .....+
T Consensus 156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~ 227 (262)
T cd05058 156 -VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS---FDITVYLLQGRRL----LQPEYC 227 (262)
T ss_pred -ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHhcCCCC----CCCCcC
Confidence 1111234567789999999988999999999999999999994 666765332 2222222221111 112346
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
|+.+.+++..||..+|++||++.+|.+.|++++.
T Consensus 228 ~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 228 PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 8899999999999999999999999999998863
No 203
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=7.2e-38 Score=306.82 Aligned_cols=252 Identities=21% Similarity=0.288 Sum_probs=194.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
++|++.+.||+|+||.||+|.+..+++.||+|+..... ...+..|+.+++.++|.+.+ .+..+.......+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLV-NLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEe-eeeeEEeeCCEEEEEE
Confidence 57999999999999999999999899999999853321 23467899999999865544 4555566778889999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||+.+.+.+.+......+++..++.++.||+.||+|||++||+|+||||+||+++ .++.++|+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFARILTGPGDD 156 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEECccccceecCCCccc
Confidence 9995544444433455799999999999999999999999999999999999994 6789999999999876543211
Q ss_pred cccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc----------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK---------- 230 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~---------- 230 (473)
.....++..|+|||.+.+ ..++.++|||||||++|||++|..||.+....+....+......
T Consensus 157 -------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 157 -------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred -------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcc
Confidence 123467889999999886 45789999999999999999999999875432222221111100
Q ss_pred -------------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 -------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 -------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
............++..+.+||.+||..+|++||++.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil 281 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELL 281 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHh
Confidence 001112233456789999999999999999999988774
No 204
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.3e-38 Score=343.74 Aligned_cols=262 Identities=25% Similarity=0.342 Sum_probs=202.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.++||+|+||.||+|.+..+++.||||++.... ...+.+|+++++.++|++++ .+..++..++..+++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIV-kl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIV-PVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcC-eEEEEEeeCCEEEEE
Confidence 68999999999999999999999999999999854321 23578899999999965555 555566777889999
Q ss_pred EecC-CCCHHHHHHHc----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEec
Q 011988 81 IDLL-GPSLEDLFNFC----------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 149 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~----------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 149 (473)
|||+ |++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++ ..+.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd---~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG---LFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc---CCCCEEEEec
Confidence 9999 88999998632 12356778899999999999999999999999999999994 7788999999
Q ss_pred CCcccccCCCCcc-----------ccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 011988 150 GLAKRYRDTATHQ-----------HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 218 (473)
Q Consensus 150 Gla~~~~~~~~~~-----------~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~ 218 (473)
|+++......... ...........||+.|+|||++.+..++.++|||||||++|||++|..||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9998762211000 00011123457999999999999999999999999999999999999999763321
Q ss_pred CHHHHHHHHhhccccccHH-HHhcCCcHHHHHHHHHHhcCCCCCCC-CHHHHHHHHHHHHHH
Q 011988 219 TKKQKYEKISEKKVSTSIE-ALCRGYPTEFASYFHYCRSLRFDDKP-DYAYLKRLFRDLFIR 278 (473)
Q Consensus 219 ~~~~~~~~i~~~~~~~~~~-~l~~~~p~~l~~li~~cl~~dp~~RP-t~~~l~~~L~~l~~~ 278 (473)
... ... ....+.. .....+|+.+.+++.+||..||++|| +++++.+.|+..+..
T Consensus 238 ki~--~~~----~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 238 KIS--YRD----VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhh--hhh----hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 111 0111100 11246789999999999999999996 567788888877653
No 205
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.1e-38 Score=309.43 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=199.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCC-----CcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQT-----NEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 75 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~ 75 (473)
..++|.+.+.||.|+||.||+|.+... +..||+|...... ...+.+|+.+++.+.|+ ++..+..+.....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~-~i~~~~~~~~~~~ 82 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSTGQ 82 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCC-ceeEEEEEEcCCC
Confidence 357899999999999999999997643 3789999854332 23467899999999855 4555666666778
Q ss_pred eEEEEEecC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEE
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVY 145 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~---------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vk 145 (473)
..+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~---~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---EDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc---CCCCEE
Confidence 889999999 789999986432 2368889999999999999999999999999999999994 778999
Q ss_pred EEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHH
Q 011988 146 IIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKY 224 (473)
Q Consensus 146 L~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~ 224 (473)
|+|||+++....... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||.+... .+..
T Consensus 160 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~ 231 (277)
T cd05032 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---EEVL 231 (277)
T ss_pred ECCcccchhhccCcc-----cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---HHHH
Confidence 999999986544321 111234457889999999998889999999999999999998 9999976432 2223
Q ss_pred HHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 225 EKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 225 ~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
..+..... ..+...++.++.+++..||..+|++||++.+|.+.|+
T Consensus 232 ~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 232 KFVIDGGH----LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHhcCCC----CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 33322211 1123457899999999999999999999999988775
No 206
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.3e-38 Score=311.19 Aligned_cols=249 Identities=18% Similarity=0.272 Sum_probs=195.6
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc---hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~---~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
..+.|+++++||.|+||.||+|++..+++.|++|+...... ..+..|+.+++.++|.+++ .+..++......++||
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIV-KLLGAFYWDGKLWIMI 88 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEe-eeEEEEEeCCeEEEEE
Confidence 45779999999999999999999999999999999654432 3467899999999965544 4544555667889999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|..++......+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||++........
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEEEccCccceecccccc
Confidence 999 7788888765566799999999999999999999999999999999999994 678999999999875433211
Q ss_pred ccccccccCCCcccCccccccccccC-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLG-----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
......++..|+|||++.+ ..++.++|||||||++|||++|..||..... ...+.++......
T Consensus 166 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~-- 233 (292)
T cd06644 166 -------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEPP-- 233 (292)
T ss_pred -------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH---HHHHHHHhcCCCc--
Confidence 1134568899999999853 3468899999999999999999999976432 2222222221111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.......++.++.++|.+||..+|++||++.+++
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 267 (292)
T cd06644 234 TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLL 267 (292)
T ss_pred cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 1112245678999999999999999999988774
No 207
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3e-38 Score=318.22 Aligned_cols=257 Identities=20% Similarity=0.211 Sum_probs=196.2
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeE----eCCe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGV----EGDY 76 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~----~~~~ 76 (473)
++++|++.++||+|+||.||+|.+..+++.||||++... ....+..|+.+++.++|.+++..+..+.. ....
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 678999999999999999999999999999999985432 22346779999999997666655544322 2235
Q ss_pred EEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 77 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
.+++|||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++...
T Consensus 83 ~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 83 VYIVQELMETDLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEECcccceeecc
Confidence 79999999999998886 45799999999999999999999999999999999999994 77899999999998764
Q ss_pred CCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh------
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE------ 229 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~------ 229 (473)
....... ......||..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.........+..+..
T Consensus 158 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 158 PEHDHTG----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred ccccccC----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 4322111 1234578999999998765 4589999999999999999999999976432111111100000
Q ss_pred -----------------ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 230 -----------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 230 -----------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.........+...+++++.++|.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~ 291 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA 291 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00011112233456788999999999999999999877743
No 208
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.5e-38 Score=312.33 Aligned_cols=257 Identities=21% Similarity=0.243 Sum_probs=197.5
Q ss_pred ceEEEeeEeecCceEEEEEEE----cCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEe-CCeEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTN----IQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVE-GDYNV 78 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~----~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~-~~~~~ 78 (473)
.|++++.||+|+||.||+|.. ..++..||+|.+.... ...+.+|+.+++.+.|.+.+..+..+... ....+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 479999999999999999974 3568899999854332 24578899999999876666555444333 36789
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
++|||+ +++|.+++......+++.+++.++.||+.||+|||++||+||||||+|||++ .++.++|+|||+++.+..
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECCCcccccccc
Confidence 999999 8999999975555689999999999999999999999999999999999995 678899999999987654
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC------------CHHHHHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG------------TKKQKYE 225 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~------------~~~~~~~ 225 (473)
..... .......++..|+|||++.+..++.++|||||||++|||+++..|+...... .......
T Consensus 162 ~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 162 DKEYY----TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred Cccce----eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 32211 1123456778899999999888999999999999999999987765321100 0000011
Q ss_pred HHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 226 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 226 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
.+.... . ......++.++.+|+.+||+.+|++||++.++++.|+++
T Consensus 238 ~~~~~~-~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGK-R---LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCc-c---CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111111 0 112345789999999999999999999999999998875
No 209
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.6e-38 Score=309.76 Aligned_cols=248 Identities=19% Similarity=0.332 Sum_probs=192.9
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|++.+.||+|+||.||+|.+..+|+.||||...... ..++..|..++.+..+++++..+..+.......+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 57999999999999999999999999999999854432 23455676665555556666666666677788999999
Q ss_pred cCCCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 83 LLGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 83 ~~g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|+.++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecccccccccc
Confidence 9999999888642 34689999999999999999999997 99999999999999 47789999999999866432
Q ss_pred CCccccccccCCCcccCccccccccccC----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLG----IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
.. .....|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... ..+.+..+......
T Consensus 158 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~- 226 (283)
T cd06617 158 VA--------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PFQQLKQVVEEPSP- 226 (283)
T ss_pred cc--------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CHHHHHHHHhcCCC-
Confidence 21 123468899999999865 4468999999999999999999999965322 12222222211111
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.. ....+|.++.++|..||..+|++||++.+|.+
T Consensus 227 ~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 227 QL--PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CC--CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 11347899999999999999999999887743
No 210
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.9e-38 Score=314.84 Aligned_cols=254 Identities=19% Similarity=0.228 Sum_probs=187.3
Q ss_pred EeeEeecCceEEEEEEEcC--CCcEEEEEEcccCC-chhHHHHHHHHHHhcCCCCCCeeEEeeE-eCCeEEEEEecCCCC
Q 011988 12 GRKIGSGSFGEIYLGTNIQ--TNEEVAIKLNVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYNVLVIDLLGPS 87 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~--~~~~vAiK~~~~~~-~~~l~~E~~il~~L~~~~~i~~~~~~~~-~~~~~~lv~e~~g~s 87 (473)
..+||+|+||.||+|.+.. ++..||+|.+.... ...+.+|+.+++.++|++++..+..+.. .....+++|||++++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~ 85 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHD 85 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCc
Confidence 4689999999999999654 56789999865433 3457889999999998777766665543 456789999999999
Q ss_pred HHHHHHHc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeC-CCCCcEEEEecCCcccccCC
Q 011988 88 LEDLFNFC--------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 88 L~~~l~~~--------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~~ 158 (473)
|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+..+ +..+.+||+|||+++.+...
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~ 165 (317)
T cd07867 86 LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165 (317)
T ss_pred HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCC
Confidence 99987532 1248899999999999999999999999999999999999532 35678999999999876543
Q ss_pred CCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCH------HHHHHHHhhcc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK------KQKYEKISEKK 231 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~------~~~~~~i~~~~ 231 (473)
... ........||..|+|||++.+. .++.++|||||||++|||++|+.||........ ...+..+....
T Consensus 166 ~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 166 LKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred ccc----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 211 1122346789999999999874 589999999999999999999999975322110 00011100000
Q ss_pred c----------------c-------------cc----HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 V----------------S-------------TS----IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 ~----------------~-------------~~----~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
. . .. ........+..+.++|.+||..||.+|||+.+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l 312 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQAL 312 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHh
Confidence 0 0 00 0000112346788999999999999999988875
No 211
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.2e-38 Score=309.75 Aligned_cols=250 Identities=20% Similarity=0.271 Sum_probs=195.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.++|.+.++||+|+||.||+|.+..+++.||+|++.... ...+..|+.+++.++|++++.. ..+....+..+++||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~-~~~~~~~~~~~lv~e 86 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAY-FGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeE-EEEEEeCCEEEEEEe
Confidence 368999999999999999999999999999999854432 2346789999999986555554 445567788899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++.. ...+++.+++.++.||+.||.|||++||+|+||||+||+++ ..+.+||+|||++........
T Consensus 87 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06645 87 FCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITATIA- 161 (267)
T ss_pred ccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECcceeeeEccCccc-
Confidence 99 6799999874 45799999999999999999999999999999999999994 678899999999876543211
Q ss_pred cccccccCCCcccCcccccccccc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 162 QHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
......|+..|+|||++. +..++.++|||||||++|+|++|..||........ +..............
T Consensus 162 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~ 232 (267)
T cd06645 162 ------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA---LFLMTKSNFQPPKLK 232 (267)
T ss_pred ------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh---HHhhhccCCCCCccc
Confidence 123457899999999975 44588999999999999999999999976442211 111111111111111
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
....++..+.++|.+||..+|++||++++|++
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 11246789999999999999999999888753
No 212
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.5e-38 Score=305.67 Aligned_cols=250 Identities=21% Similarity=0.222 Sum_probs=194.4
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC--CeEEEEEe
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG--DYNVLVID 82 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~--~~~~lv~e 82 (473)
|++.++||+|+||.||+|.+..+++.||||...... ......|+.++..+.+|+++..+..++.+. ...+++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 789999999999999999999999999999854321 123456888888887566666666666655 78899999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 83 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 83 ~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
|+.++|.+++......+++..++.++.||+.||.|||++||+||||||+||+++ . +.+||+|||+++.......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~~~~~~~~-- 154 (282)
T cd07831 81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCRGIYSKPP-- 154 (282)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEecccccccccCCC--
Confidence 998899998876556799999999999999999999999999999999999995 4 9999999999986643321
Q ss_pred ccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-----------
Q 011988 163 HIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----------- 230 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~----------- 230 (473)
.....++..|+|||.+.+ ..++.++|||||||++|||++|..||.+.+.......+......
T Consensus 155 ------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 155 ------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred ------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcc
Confidence 123467899999997654 45789999999999999999999999775432211111111100
Q ss_pred ----------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 231 ----------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 231 ----------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.....+..+...++.++.++|.+||..+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0011123334567899999999999999999999887753
No 213
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.3e-38 Score=309.51 Aligned_cols=260 Identities=21% Similarity=0.233 Sum_probs=197.0
Q ss_pred CCceEEEeeEeecCceEEEEEEE----cCCCcEEEEEEcccCCc---hhHHHHHHHHHHhcCCCCCCeeEEee-EeCCeE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTN----IQTNEEVAIKLNVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFG-VEGDYN 77 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~----~~~~~~vAiK~~~~~~~---~~l~~E~~il~~L~~~~~i~~~~~~~-~~~~~~ 77 (473)
.++|++.+.||+|+||.||+|.. ..+++.||||.+..... ..+..|+++++.++|++++..+..+. ......
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 46899999999999999999973 45788999998654432 35788999999998766655544332 334567
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+++|||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE---SENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC---CCCeEEECCCccccccc
Confidence 8999999 8899999976556799999999999999999999999999999999999994 67889999999998765
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHH------------HHH
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK------------QKY 224 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~------------~~~ 224 (473)
...... .......++..|+|||++.+..++.++|||||||++|||++|..|+......... ..+
T Consensus 160 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 160 QDKEYY----KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred CCCcce----eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 432210 0111223455699999999988999999999999999999988776442211000 000
Q ss_pred HHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 225 EKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 225 ~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
..+..... .......++.++.+++..||..+|++|||+.+|.+.|+.+
T Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNG---RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCC---cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000 0011245788999999999999999999999999988764
No 214
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=316.54 Aligned_cols=257 Identities=19% Similarity=0.282 Sum_probs=211.6
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEE-cccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-NVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~-~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
-|.++++||+|+||.||+|.++.+|+.||||. -...+..++.+|+.|++++.....|.++..|+. ....||||||| .
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK-~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFK-HSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhcc-CCceEeehhhcCC
Confidence 37788999999999999999999999999997 455667789999999999996666665555554 44569999999 6
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
|+..+++...++++++.++..++...+.||+|||...-||||||..|||+ +.+|..||+|||.|-.+.+....
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDTMAK---- 185 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDTMAK---- 185 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhhHHh----
Confidence 79999999888899999999999999999999999999999999999999 58899999999999887765432
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
.++..||+.|||||++....|+.++||||||++..||..|++||.+..+.. .+..|..+..++. .-+..++.
T Consensus 186 ---RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---AIFMIPT~PPPTF--~KPE~WS~ 257 (502)
T KOG0574|consen 186 ---RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR---AIFMIPTKPPPTF--KKPEEWSS 257 (502)
T ss_pred ---hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc---eeEeccCCCCCCC--CChHhhhh
Confidence 367899999999999999999999999999999999999999998765421 1111222211111 11234578
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 011988 246 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQF 283 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~ 283 (473)
+|.+|++.||.++|++|-|+.+ ++++.|+++....
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~---L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALR---LCEHTFIKNAPGC 292 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHH---HhhhhhhcCCCcc
Confidence 9999999999999999998554 5778887776544
No 215
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7.8e-38 Score=306.58 Aligned_cols=253 Identities=21% Similarity=0.257 Sum_probs=198.9
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|++.+.||.|+||.||+|.+..+++.||||+..... ...+..|+.+++.++|.+ +..+..+...+...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY-VVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCC-CcceeeEEecCCeeEEEec
Confidence 5999999999999999999999999999999854332 346889999999998554 4555555667888999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 83 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 83 ~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
|++++|.+++......+++.+++.++.||+.||+|||++||+|+||||+||+++ ..+.++|+|||++........
T Consensus 80 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---~~~~~~l~dfg~~~~~~~~~~-- 154 (286)
T cd07832 80 YMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---ADGVLKIADFGLARLFSEEEP-- 154 (286)
T ss_pred ccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---CCCcEEEeeeeecccccCCCC--
Confidence 999999999986667799999999999999999999999999999999999995 678999999999987654321
Q ss_pred ccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-----------
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----------- 230 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~----------- 230 (473)
.......|+..|+|||++.+.. ++.++|||||||++|||++|..||.+................
T Consensus 155 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 155 ----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred ----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence 1113357899999999987654 689999999999999999998888764322111111110000
Q ss_pred -----------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 231 -----------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 231 -----------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
........+...++.++.++|..||..+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0001122334567899999999999999999999887743
No 216
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.5e-38 Score=305.42 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=198.6
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCC
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 75 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~ 75 (473)
+|.+.+.||.|+||.||+|.+..+++.||+|.+.... ...+..|+.+++.++|++ +..+..+.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN-IVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCC-eeeEEEEEEeCC
Confidence 5889999999999999999998899999999743321 134778999999998655 445555667778
Q ss_pred eEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
..+++|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||+++ +.+.++|+|||+++.
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~---~~~~~~l~dfg~~~~ 155 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD---NKGGIKISDFGISKK 155 (267)
T ss_pred ccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc---CCCCEEecccCCCcc
Confidence 889999999 7799999974 35689999999999999999999999999999999999994 778999999999987
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
+........ .........|+..|+|||.+.+..++.++|||||||++|+|++|..||.+... ...+..+....
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~--- 228 (267)
T cd06628 156 LEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIFKIGENA--- 228 (267)
T ss_pred cccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH---HHHHHHHhccC---
Confidence 753221110 01112345688999999999998899999999999999999999999987432 22232222211
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
...+...++.++.++|.+||+.||++||++.+|++
T Consensus 229 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 229 -SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11234567899999999999999999999888754
No 217
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.1e-38 Score=304.10 Aligned_cols=244 Identities=27% Similarity=0.389 Sum_probs=198.6
Q ss_pred eeEeecCceEEEEEEEcCC---CcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSGSFGEIYLGTNIQT---NEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~---~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
+.||+|+||.||+|.+... +..|+||+..... ...+..|+++++.+. ++++..+..+.......+++|||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEecc
Confidence 4799999999999998866 8899999854433 356888999999999 555555555556688899999999
Q ss_pred CCCHHHHHHHc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 85 GPSLEDLFNFC--------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 85 g~sL~~~l~~~--------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+++|.+++... ...+++..++.++.||+.||+|||++||+|+||||+||+++ .++.+||+|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEEEcccccccccc
Confidence 99999999865 46799999999999999999999999999999999999994 67899999999998765
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
.... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+.....
T Consensus 157 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~~--- 225 (262)
T cd00192 157 DDDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEVLEYLRKGYR--- 225 (262)
T ss_pred cccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCC---
Confidence 5332 112244567889999999998889999999999999999999 6999987633 233333332111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
......+|.++.+++..||..+|++||++.+|.+.|
T Consensus 226 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 226 -LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred -CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 112345689999999999999999999999998776
No 218
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.3e-38 Score=304.22 Aligned_cols=246 Identities=22% Similarity=0.304 Sum_probs=193.1
Q ss_pred eeEeecCceEEEEEEEcCCC---cEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSGSFGEIYLGTNIQTN---EEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~---~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
++||+|+||.||+|.+...+ ..||+|....... ..+..|+.+++.+.|.+++..+. +.. ....+++|||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~-~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEE-EEc-CCceEEEEEeCC
Confidence 47999999999999876555 7899998554433 35778999999998766555444 333 45578999998
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
+++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||+++........
T Consensus 79 ~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df~~~~~~~~~~~~--- 151 (257)
T cd05060 79 LGPLLKYLKKR-REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDFGMSRALGAGSDY--- 151 (257)
T ss_pred CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccccccceeecCCcc---
Confidence 78999999743 3799999999999999999999999999999999999994 7789999999999876443221
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
+.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+...... .....+
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~----~~~~~~ 223 (257)
T cd05060 152 -YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLESGERL----PRPEEC 223 (257)
T ss_pred -cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHHcCCcC----CCCCCC
Confidence 111122334578999999998899999999999999999998 9999976543 2222333222111 123467
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
+..+.++|.+||..+|++||++.+|.+.|+++
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 89999999999999999999999999999875
No 219
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=5.1e-38 Score=303.97 Aligned_cols=253 Identities=23% Similarity=0.378 Sum_probs=202.2
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+..++|.+.++||.|+||.||+|.+. .+..||||.+... ....+..|+.+++.++|.+ +..+..+.......+++|
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDK-LVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCC-EeeeeeeeecCCceEEEE
Confidence 45688999999999999999999974 5578999985543 3456889999999999654 555555566667889999
Q ss_pred ecC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++ +++.+||+|||+++.+....
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccceeccchh
Confidence 998 789999987433 4689999999999999999999999999999999999994 67899999999998765321
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
. .......++..|+|||.+.+..++.++|||||||++|||++ |+.||.+... ...+..+..... . .
T Consensus 158 ~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~~~~~~~~-~---~ 224 (261)
T cd05034 158 Y------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---REVLEQVERGYR-M---P 224 (261)
T ss_pred h------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCC-C---C
Confidence 1 11123345678999999999889999999999999999998 9999976432 233333322111 1 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
....+|.++.+++.+||..+|++||+++++.+.|+.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 225 RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 124568999999999999999999999999998874
No 220
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.2e-38 Score=308.69 Aligned_cols=252 Identities=23% Similarity=0.337 Sum_probs=198.5
Q ss_pred CCceEEEeeEeecCceEEEEEEEc-----CCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNI-----QTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
..+|.+.++||+|+||.||++... .++..|++|...... ...+..|+++++.++|.+ |..+..++......
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~ 82 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQH-IVRFYGVCTEGRPL 82 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCC-CceEEEEEecCCce
Confidence 457999999999999999999743 346689999854433 345888999999998655 44555566777888
Q ss_pred EEEEecC-CCCHHHHHHHcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCC
Q 011988 78 VLVIDLL-GPSLEDLFNFCS--------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 142 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~--------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~ 142 (473)
+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ +++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~---~~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG---QGL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc---CCC
Confidence 9999998 789999987542 2488999999999999999999999999999999999995 678
Q ss_pred cEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHH
Q 011988 143 QVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKK 221 (473)
Q Consensus 143 ~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~ 221 (473)
.+||+|||+++....... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .
T Consensus 160 ~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~ 231 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN---T 231 (280)
T ss_pred CEEECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH---H
Confidence 999999999976543221 111233456788999999999899999999999999999998 9999976433 2
Q ss_pred HHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 222 QKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 222 ~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
..+..+...... .....+|+++.+++.+||..||++||++.+|.+.|+
T Consensus 232 ~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 232 EAIECITQGREL----ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHcCccC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 223333221111 122467899999999999999999999999988775
No 221
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=8.6e-38 Score=310.88 Aligned_cols=255 Identities=18% Similarity=0.166 Sum_probs=196.7
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeE-eCCeEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYNV 78 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~-~~~~~~ 78 (473)
-.++|++.+.||.|+||.||+|.+..+|+.||+|+..... ...+..|+.+++.++|.+++..+..+.. .....+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 3578999999999999999999999999999999854221 2235689999999998776665554433 235689
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 79 lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
+||||++++|.+++......+++.+++.++.||+.||.|||++||+||||||+||+++ ..+.+||+|||++..+...
T Consensus 85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccceeeecCCc
Confidence 9999999999999987667799999999999999999999999999999999999994 7789999999999876543
Q ss_pred CCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc------
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------ 231 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~------ 231 (473)
... .....++..|+|||.+.+ ..++.++|||||||++|||++|..||.+.........+.......
T Consensus 162 ~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07845 162 AKP-------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWP 234 (309)
T ss_pred cCC-------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhch
Confidence 211 122345788999999876 457999999999999999999999997654322222221111000
Q ss_pred ----------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 ----------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 ----------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
...........+++++.++|..||..||++||++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il 288 (309)
T cd07845 235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEAL 288 (309)
T ss_pred hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 00001111223578899999999999999999988774
No 222
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.4e-38 Score=307.35 Aligned_cols=247 Identities=23% Similarity=0.412 Sum_probs=191.9
Q ss_pred EEEeeEeecCceEEEEEEEc----CCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 10 RLGRKIGSGSFGEIYLGTNI----QTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 10 ~i~~~LG~G~fG~Vy~a~~~----~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.+.+.||.|.||.||+|.+. ..+..|+||++.... ...+..|+++++.++ |++|..+.++.......++|+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLR-HPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHS-BTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccc-ccccccccccccccccccccc
Confidence 57899999999999999987 346789999974432 346889999999996 555555656666767789999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||+ +++|.+++... ...+++..++.|+.||+.||.|||+++|+|+||+++|||++ .++.+||+|||++.......
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccc
Confidence 999 68999999876 56799999999999999999999999999999999999995 68899999999998763222
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.. .......+...|+|||.+.+..++.++||||||+++|||++ |+.||.+.. ..+....+...... .
T Consensus 158 ~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~---~~~~~~~~~~~~~~----~ 225 (259)
T PF07714_consen 158 KY-----KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD---NEEIIEKLKQGQRL----P 225 (259)
T ss_dssp SE-----EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC---HHHHHHHHHTTEET----T
T ss_pred cc-----ccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccc----e
Confidence 11 11233457789999999999889999999999999999999 789997753 33334444332221 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
....+|..+.++|..||..||++||++.+|.+.|
T Consensus 226 ~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 2346899999999999999999999999998765
No 223
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.4e-38 Score=305.75 Aligned_cols=256 Identities=21% Similarity=0.327 Sum_probs=201.9
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCC---CcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
.++|.+.++||.|+||.||+|.+... ...|+||...... ...+..|+.+++.+.|.+++..+..+ . ....+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-~-~~~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVI-T-ENPVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEE-c-CCCcE
Confidence 46799999999999999999987644 3468999854332 33578899999999976666655443 3 34567
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
++|||+ +++|.+++......+++..++.++.||+.||+|||++|++|+||||+|||++ ..+.+||+|||+++....
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCceeeeccc
Confidence 999998 7899999986556799999999999999999999999999999999999995 678999999999986654
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
.... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.... .....+......
T Consensus 160 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~~~~~~~--- 227 (270)
T cd05056 160 ESYY------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---DVIGRIENGERL--- 227 (270)
T ss_pred ccce------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHcCCcC---
Confidence 3211 1122344568999999988889999999999999999986 99999775432 222222222111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
.....+|.++.++|.+||..+|++||++.++.+.|+++..++
T Consensus 228 -~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 228 -PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 123567899999999999999999999999999999887543
No 224
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.1e-37 Score=307.03 Aligned_cols=251 Identities=22% Similarity=0.252 Sum_probs=195.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.++|++.+.||.|+||.||+|.+..+++.||||.+.... ...+..|+.+++.++|. +|..+..+....+..++||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHA-NIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCc-ceeeEEEEEecCCeEEEEE
Confidence 478999999999999999999998899999999853322 23467899999999865 4555666677888999999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||++++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.......
T Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~~- 158 (291)
T cd07844 83 EYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGELKLADFGLARAKSVPSK- 158 (291)
T ss_pred ecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCCEEECccccccccCCCCc-
Confidence 9998899999886666799999999999999999999999999999999999994 678899999999875432111
Q ss_pred cccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh---cc------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE---KK------ 231 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~---~~------ 231 (473)
......++..|+|||++.+ ..++.++|||||||++|+|++|..||.+.... ......+.. ..
T Consensus 159 ------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV--EDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred ------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHhcCCCChhhhh
Confidence 1122356889999999876 45899999999999999999999999764321 111111110 00
Q ss_pred ----------------ccccHHHHhcCCc--HHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 ----------------VSTSIEALCRGYP--TEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 ----------------~~~~~~~l~~~~p--~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
....+......+. .++.+++.+||+.+|++||++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l 286 (291)
T cd07844 231 GVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAM 286 (291)
T ss_pred hhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHh
Confidence 0011111222334 7889999999999999999988775
No 225
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.4e-38 Score=309.85 Aligned_cols=248 Identities=21% Similarity=0.311 Sum_probs=197.1
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
...+|++.+.||.|+||.||+|.+..+++.|+||...... ...+..|+.+++.+.|.+.+. +..++..+...++||
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~-~~~~~~~~~~~~lv~ 96 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN-YLDSYLVGDELWVVM 96 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEee-EEEEEEeCCEEEEee
Confidence 3578999999999999999999999999999999854433 345778999999988655544 444556677899999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|.+++. ...+++.+++.++.||+.||.|||++||+||||||+|||++ .++.++|+|||++........
T Consensus 97 e~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 97 EYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred cccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEECccccchhcccccc
Confidence 999 789999986 34689999999999999999999999999999999999994 678999999999876543221
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......|+..|+|||.+.+..++.++|||||||++|+|++|+.||....... ..+. +..... .. ....
T Consensus 172 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~~~~-~~~~~~-~~-~~~~ 239 (296)
T cd06654 172 -------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYL-IATNGT-PE-LQNP 239 (296)
T ss_pred -------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--hHHH-HhcCCC-CC-CCCc
Confidence 1123478899999999998889999999999999999999999997643311 1111 111111 01 1112
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..++..+.++|.+||..+|++||++.+|++
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred cccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 457789999999999999999999888754
No 226
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-38 Score=320.22 Aligned_cols=257 Identities=23% Similarity=0.326 Sum_probs=196.6
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCC-eEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD-YNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~-~~~lv~e 82 (473)
++|.-...||+|+||.||+|.. .++..||||...... ..+|..|+.++..++ |+++..+.+|+.+.+ ..+||+|
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~~~~LVYE 152 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLR-HPNLVKLLGYCLEGGEHRLLVYE 152 (361)
T ss_pred hCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCC-CcCcccEEEEEecCCceEEEEEE
Confidence 5777889999999999999985 455899999854433 457999999999999 555555566666666 5999999
Q ss_pred cC-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---CcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 83 LL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
|+ .|+|.+.+..... .++|...++|+.++|.||+|||+.. |||||||++|||+ |.+..+||+|||+|+....
T Consensus 153 ym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 153 YMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred ccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcccCCc
Confidence 99 7899999985555 8999999999999999999999843 9999999999999 5899999999999976543
Q ss_pred -CCCccccccccCCCc-ccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC---HHHHH-HHHhhcc
Q 011988 158 -TATHQHIPYRENKNL-TGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT---KKQKY-EKISEKK 231 (473)
Q Consensus 158 -~~~~~~~p~~~~~~~-~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~---~~~~~-~~i~~~~ 231 (473)
.... ... .||..|+|||++..+..+.|+|||||||+|+||++|+.+.+...... ..... ..+....
T Consensus 230 ~~~~~--------~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~ 301 (361)
T KOG1187|consen 230 GDTSV--------STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGK 301 (361)
T ss_pred cccce--------eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcc
Confidence 2111 112 79999999999998899999999999999999999998887543111 11111 1111111
Q ss_pred ccccHHH-Hh-cCCc-----HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 232 VSTSIEA-LC-RGYP-----TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 232 ~~~~~~~-l~-~~~p-----~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
....+.. +. ..++ ..+..+...|+..+|.+||++.++.+.|+.+.
T Consensus 302 ~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 302 LREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred hhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 1111111 11 1223 23667888999999999999999988885543
No 227
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=329.02 Aligned_cols=255 Identities=25% Similarity=0.358 Sum_probs=205.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCc---E-EEEEEccc------CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE---E-VAIKLNVK------TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~---~-vAiK~~~~------~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
++-.+.++||+|+||+||+|.....+. . ||||.... ....++..|+++++.|+| ++|..++++......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H-~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH-PNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC-CCEEEEEEEEcCCCc
Confidence 445567999999999999999775422 3 89998442 224458899999999994 555666678888999
Q ss_pred EEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 77 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
.+||||+| ||+|.++++.....++..+.+.++.+.+.||+|||++++|||||-..|+|++ ..+.+||+|||+++..
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---KKGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---CCCeEEeCccccccCC
Confidence 99999999 8899999997766799999999999999999999999999999999999995 5677899999998754
Q ss_pred cCCCCccccccccCC-CcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccc
Q 011988 156 RDTATHQHIPYRENK-NLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVS 233 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~-~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~ 233 (473)
..-.. .. ...-..+|+|||.+....|+.++|||||||++||+++ |..||.+....+.. .++......
T Consensus 313 ~~~~~--------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~---~kI~~~~~r 381 (474)
T KOG0194|consen 313 SQYVM--------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK---AKIVKNGYR 381 (474)
T ss_pred cceee--------ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH---HHHHhcCcc
Confidence 31111 11 1124578999999999999999999999999999999 89999997664333 333222222
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
.. .....|.++..++..||..+|++||++.++.+.|+.+....
T Consensus 382 ~~---~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 382 MP---IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred CC---CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 21 12367899999999999999999999999999999987544
No 228
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.1e-38 Score=303.31 Aligned_cols=246 Identities=22% Similarity=0.324 Sum_probs=198.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
.++|++.+.||.|+||.||+|.. .++.||||...... ...+..|+.+++.++|.+++.. ..+.......+++|||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~-~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQL-LGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeee-EEEEcCCCCeEEEEEe
Confidence 56899999999999999999985 48899999855443 3568889999999986665544 4445557788999999
Q ss_pred C-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 84 L-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
+ +++|.+++..... .+++..++.++.|++.||.|||++||+|+||||+||+++ .++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCCEEEcccccccccccccc-
Confidence 9 5799999875432 689999999999999999999999999999999999994 778999999999986633211
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
...++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+..... ....
T Consensus 158 ---------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~ 221 (256)
T cd05039 158 ---------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPHVEKGYR----MEAP 221 (256)
T ss_pred ---------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHhcCCC----CCCc
Confidence 2244668999999998889999999999999999997 9999976432 222222222111 1123
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
..+|+++.++|..||..+|++||++.+|.+.|+.
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 4678999999999999999999999999988864
No 229
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.7e-38 Score=308.37 Aligned_cols=245 Identities=18% Similarity=0.275 Sum_probs=193.9
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
.|++.+.||.|+||.||+|.+..++..+++|...... ...+..|+.+++.+.|.+.+. +..++......+++|||+
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~-~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK-LLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeee-EEEEEeeCCEEEEEEEec
Confidence 4788999999999999999999999999999865433 234678999999998665554 444556677889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|..++......+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++........
T Consensus 85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~~~~~~~~--- 158 (282)
T cd06643 85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQ--- 158 (282)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCEEEcccccccccccccc---
Confidence 7788888765556799999999999999999999999999999999999994 678899999999976543221
Q ss_pred cccccCCCcccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 164 IPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
......|+..|+|||++. +..++.++|||||||++|||++|..||..... ...+..+....... ..
T Consensus 159 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~--~~ 229 (282)
T cd06643 159 ----RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEPPT--LA 229 (282)
T ss_pred ----ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH---HHHHHHHhhcCCCC--CC
Confidence 123457899999999984 44578899999999999999999999976432 22233322211111 11
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
....++.++.++|..||+.||++||+++++
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 259 (282)
T cd06643 230 QPSRWSSEFKDFLKKCLEKNVDARWTTTQL 259 (282)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 123578999999999999999999998776
No 230
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=7.3e-38 Score=310.81 Aligned_cols=258 Identities=19% Similarity=0.259 Sum_probs=200.5
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCc----EEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCC
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGD 75 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~ 75 (473)
.-.++|++.+.||+|+||.||+|.+..+++ .||+|+...... ..+..|+.+++.+.|.+++..+..+ ...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~-~~~- 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVC-LSP- 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE-cCC-
Confidence 345789999999999999999999887776 468887544332 2467899999999876666655544 333
Q ss_pred eEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
..+++++|+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---SPNHVKITDFGLARL 158 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---CCCceEEcccccccc
Confidence 356788888 7899999886666789999999999999999999999999999999999994 677899999999987
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccc
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVS 233 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~ 233 (473)
+....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+..... +..+......
T Consensus 159 ~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~----~~~~~~~~~~ 229 (303)
T cd05110 159 LEGDEKEY-----NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE----IPDLLEKGER 229 (303)
T ss_pred ccCccccc-----ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHHCCCC
Confidence 64322110 1123345778999999999899999999999999999997 999997753211 2222221111
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
.. ....++..+.+++..||..+|++||++.+|.+.|+.+...
T Consensus 230 ~~---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 230 LP---QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11 1235678999999999999999999999999999987643
No 231
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=9.8e-38 Score=310.02 Aligned_cols=260 Identities=18% Similarity=0.250 Sum_probs=202.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||+|+||.||++.+..+++.|+||.+.... ...+..|+++++.++|++ |..+...+......+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPF-VVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCC-eeeeEEEEecCCEEEEE
Confidence 57999999999999999999999999999999854432 234678999999998654 44555666677889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ |++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++ ..+.+||+|||+++......
T Consensus 80 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 80 MEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred EecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCEEEeeCCCccccCcCc
Confidence 9999 78999999743 5699999999999999999999999999999999999994 77899999999987432111
Q ss_pred Cccc--------cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011988 160 THQH--------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 231 (473)
Q Consensus 160 ~~~~--------~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 231 (473)
.... ..........|+..|+|||.+.+..++.++|||||||++|||++|..||.+... .+.+..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~---~~~~~~~~~~~ 232 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP---EELFGQVISDD 232 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcc
Confidence 1000 000111235678899999999988899999999999999999999999976432 23333322221
Q ss_pred ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 232 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 232 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
...+. ....+|.++.++|.+||+.+|++||+...+.++|++.+
T Consensus 233 ~~~~~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~ 275 (305)
T cd05609 233 IEWPE--GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRF 275 (305)
T ss_pred cCCCC--ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCcc
Confidence 11111 11257899999999999999999999888888787754
No 232
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.3e-38 Score=302.52 Aligned_cols=249 Identities=20% Similarity=0.317 Sum_probs=200.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
.++|++.++||.|+||.||+|.+..+++.|++|...... ..++..|+++++.++|.+++ .+..+.......++++|++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~-~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIV-KYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEe-eeeeeeecCCcEEEEEecC
Confidence 368999999999999999999998889999999854332 56788999999999755544 5555556678889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++......+++..++.++.||+.||.|||+.||+|+||+|+||+++ .++.++|+|||++........
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l~dfg~~~~~~~~~~--- 154 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLTDTMA--- 154 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEEcccccchhcccCcc---
Confidence 6799999986677899999999999999999999999999999999999994 678899999999987654321
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||....... ....+..... . .......+
T Consensus 155 ----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~ 225 (256)
T cd06612 155 ----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR---AIFMIPNKPP-P-TLSDPEKW 225 (256)
T ss_pred ----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh---hhhhhccCCC-C-CCCchhhc
Confidence 1133468899999999999899999999999999999999999997643321 1111111110 0 01112346
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
+.++.++|..||+.||++||++.+|++
T Consensus 226 ~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 226 SPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 789999999999999999999888753
No 233
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.5e-38 Score=308.89 Aligned_cols=247 Identities=17% Similarity=0.256 Sum_probs=195.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|++++.||+|+||.||+|.+..++..||+|.+.... ...+.+|+.+++.++|++++..+ .++......+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~-~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFY-GAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhh-hheecCCeEEEEEe
Confidence 47999999999999999999999899999999754321 24577899999999865555444 45566788899999
Q ss_pred cC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 83 LL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 83 ~~-g~sL~~~l~~~--~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|+ +++|..++... ...+++..+..++.||+.||.|||+ .||+|+||||+|||++ ..+.+||+|||++..+...
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeecCCcccccCC
Confidence 99 77998888743 2369999999999999999999997 5999999999999995 6789999999999766432
Q ss_pred CCccccccccCCCcccCccccccccccCCC------CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIE------QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 232 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~------~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 232 (473)
.. ....|+..|+|||.+.+.. ++.++|||||||++|+|++|..||...........+..+.....
T Consensus 157 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd06622 157 LA---------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP 227 (286)
T ss_pred cc---------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC
Confidence 21 2346888999999986543 58899999999999999999999976443322223333322221
Q ss_pred cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 233 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 233 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
. .+...++.++.++|..||..+|++||++.+|.+
T Consensus 228 ~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 228 P----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred C----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 1 223457899999999999999999999887754
No 234
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.7e-38 Score=310.76 Aligned_cols=251 Identities=17% Similarity=0.268 Sum_probs=195.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|.+.++||+|+||.||++.+..+++.||||...... ...+..|+.++..+..+++|..+..+.......+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 46778899999999999999999999999999854432 33577899999999755666666666667778899999
Q ss_pred cCCCCHHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 83 LLGPSLEDLFNF----CSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 83 ~~g~sL~~~l~~----~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
|++.+|.++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++ ..+.+||+|||+++.+..
T Consensus 84 ~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCcEEEeecchhHHhcc
Confidence 999888776542 23569999999999999999999997 5999999999999994 678899999999976544
Q ss_pred CCCccccccccCCCcccCccccccccccCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
... .....|+..|+|||++.+. .++.++|||||||++|||++|+.||.... ...+.+..+.......
T Consensus 161 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~ 230 (288)
T cd06616 161 SIA--------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPPI 230 (288)
T ss_pred CCc--------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCCc
Confidence 321 1234688999999999876 68999999999999999999999997643 1222222222211111
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
........++.++.+||..||..+|++||++++|+.
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111112347899999999999999999999888743
No 235
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.1e-38 Score=309.08 Aligned_cols=248 Identities=21% Similarity=0.303 Sum_probs=197.8
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.++|++.++||.|+||.||+|.+..+++.||+|+..... ...+..|+.+++.++| +++..+..++......++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH-PNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC-CceeEEEEEEecCCeEEEEee
Confidence 367999999999999999999998899999999854433 2357789999999995 555556556667888999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++......+++..++.++.|++.||.|||++||+|+||||+||+++ .++.++|+|||++........
T Consensus 83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~---~~~~~~l~d~g~~~~~~~~~~- 158 (280)
T cd06611 83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT---LDGDVKLADFGVSAKNKSTLQ- 158 (280)
T ss_pred ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC---CCCCEEEccCccchhhccccc-
Confidence 99 7799999886667799999999999999999999999999999999999994 778999999999876543221
Q ss_pred cccccccCCCcccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 162 QHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
......|+..|+|||.+. +..++.++|||||||++|||++|..||..... ...+..+.......
T Consensus 159 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~-- 227 (280)
T cd06611 159 ------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP---MRVLLKILKSEPPT-- 227 (280)
T ss_pred ------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH---HHHHHHHhcCCCCC--
Confidence 113457899999999975 34467899999999999999999999976532 22233332221111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
......++.++.++|..||..+|++||++.+++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 260 (280)
T cd06611 228 LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELL 260 (280)
T ss_pred cCCcccCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 011235788999999999999999999988773
No 236
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.2e-37 Score=307.65 Aligned_cols=252 Identities=19% Similarity=0.205 Sum_probs=194.6
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc--------hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH--------PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~--------~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
+|.+.+.||.|+||.||+|.+..+++.||||.+..... ..+..|+.+++.++|.+++..+ .+.......++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~-~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLL-DVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhh-heeecCCEEEE
Confidence 58999999999999999999998999999998544322 2356799999999965555544 45555788999
Q ss_pred EEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 80 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 80 v~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||||++++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||++ .++.++|+|||+++......
T Consensus 80 v~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 80 VFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred EEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEccceeeeeccCCC
Confidence 999999999999975444699999999999999999999999999999999999995 67899999999998765432
Q ss_pred CccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-------
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------- 231 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~------- 231 (473)
. ......++..|+|||.+.+ ..++.++|||||||++|||++|..||.+........+........
T Consensus 157 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 157 R-------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred c-------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhh
Confidence 1 1123356788999999865 457899999999999999999988887644322111111110000
Q ss_pred -------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 232 -------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 232 -------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.......+....+.++.++|..||..+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 011122233456789999999999999999999887744
No 237
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=9e-38 Score=302.72 Aligned_cols=252 Identities=20% Similarity=0.345 Sum_probs=198.8
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+..++|++.++||+|+||.||+|.+. .+..||+|...... ...+.+|+.+++.++|.+++..+..+ .. ...+++|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-~~-~~~~~v~ 79 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK-EPIYIIT 79 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEE-cC-CCeEEEE
Confidence 45789999999999999999999854 55679999854432 34678899999999876666554443 33 6678999
Q ss_pred ecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||+ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+||+++ ..+.+||+|||++..+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCCcceeeccCCC
Confidence 999 67999998743 34588899999999999999999999999999999999994 77899999999997664322
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.. ......++..|+|||++.+..++.++|||||||++|++++ |..||.+.... .....+...... .
T Consensus 157 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~~~~~~----~ 223 (260)
T cd05073 157 YT------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRALERGYRM----P 223 (260)
T ss_pred cc------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHhCCCCC----C
Confidence 11 1123345678999999998889999999999999999998 99999875432 222222221111 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRD 274 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~ 274 (473)
....++.++.+++.+||..+|++||++.+|.+.|+.
T Consensus 224 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 224678999999999999999999999999998875
No 238
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=5.2e-38 Score=308.98 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=198.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
.++|++.+.||.|+||.||+|.+.. ++..||||+..... ...+..|+.+++.+.|. ++..+..++..+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~-~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHP-NIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCC-chheEEEEEcCCCc
Confidence 4679999999999999999998743 67889999865433 24577899999999865 45555556667778
Q ss_pred EEEEEecC-CCCHHHHHHHcC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEE
Q 011988 77 NVLVIDLL-GPSLEDLFNFCS---------------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFL 134 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~---------------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NIL 134 (473)
.+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 89999998 679999986321 24788899999999999999999999999999999999
Q ss_pred EeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCC
Q 011988 135 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQ 213 (473)
Q Consensus 135 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~ 213 (473)
++ .++.++|+|||++..+..... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 163 ~~---~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 163 VG---ENMVVKIADFGLSRNIYSADY-----YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred ec---CCCceEECccccceecccCcc-----ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 94 678999999999876533221 111122345678999999998899999999999999999997 889997
Q ss_pred CCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 214 GLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 214 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
+... .+....+...... .....++.++.++|.+||+.+|++||++.+|.+.|+
T Consensus 235 ~~~~---~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 235 GMAH---EEVIYYVRDGNVL----SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCH---HHHHHHHhcCCCC----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 6433 2333333322221 123467899999999999999999999999998886
No 239
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.8e-38 Score=306.52 Aligned_cols=246 Identities=21% Similarity=0.283 Sum_probs=193.8
Q ss_pred eeEeecCceEEEEEEEcCCCc--EEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNE--EVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~--~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.+..++. .+++|...... ...+..|+.++..+.+|++|..+..++......+++|||+ +
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999888775 46888754322 2457789999999976777777777777778889999998 7
Q ss_pred CCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecC
Q 011988 86 PSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 150 (473)
Q Consensus 86 ~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 150 (473)
++|.+++.... ..+++.+++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~---~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc---CCCeEEECCCC
Confidence 89999986432 2478999999999999999999999999999999999994 77899999999
Q ss_pred CcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhh
Q 011988 151 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISE 229 (473)
Q Consensus 151 la~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 229 (473)
++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||.+... ...+..+..
T Consensus 158 l~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---~~~~~~~~~ 226 (270)
T cd05047 158 LSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYEKLPQ 226 (270)
T ss_pred Cccccchhh--------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH---HHHHHHHhC
Confidence 986322110 0112234567999999988889999999999999999997 9999976432 222222222
Q ss_pred ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 230 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 230 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
.... .....++.++.+++.+||..+|.+||++.++...|+.++
T Consensus 227 ~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 GYRL----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCC----CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1111 122356789999999999999999999999999998876
No 240
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.1e-37 Score=298.86 Aligned_cols=245 Identities=21% Similarity=0.259 Sum_probs=200.8
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|++.+.||.|+||.||.+++..+++.|++|..... ....+.+|+.+++.++|. ++..+..+.......+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~-~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHP-NIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCC-CeeEEEeEEecCCeEEEEEE
Confidence 699999999999999999999999999999974332 234578899999999754 55555556667788999999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ...+++..+..++.|++.||.|||+.||+|+||||+||+++ ..+.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcceEEcccccc
Confidence 99 78999998754 34689999999999999999999999999999999999995 678899999999987644331
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......|+..|+|||++.+..++.++|||||||++|||++|..||.... ..+....+....... ..
T Consensus 157 -------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~---~~~~~~~~~~~~~~~----~~ 222 (256)
T cd08221 157 -------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN---PLNLVVKIVQGNYTP----VV 222 (256)
T ss_pred -------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHcCCCCC----Cc
Confidence 1134578999999999998889999999999999999999999997633 333344443332222 12
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..++.++.++|.+||..+|++||++.++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 567899999999999999999999888865
No 241
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=7.2e-38 Score=317.70 Aligned_cols=249 Identities=22% Similarity=0.281 Sum_probs=195.0
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEe-----
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 73 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~----- 73 (473)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.+. ....+.+|+.+++.++|.+++..+..+...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 4678999999999999999999999999999999986432 123466899999999977777666555432
Q ss_pred CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
....++||||++++|.+.+.. .++...+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~---~~~~~kL~Dfg~~~ 166 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLAR 166 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCccce
Confidence 235799999999999998863 289999999999999999999999999999999999994 77899999999998
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 233 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 233 (473)
....... .....|+..|+|||++.+..++.++|||||||++|+|++|+.||...... ..+..+......
T Consensus 167 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~---~~~~~~~~~~~~ 235 (353)
T cd07850 167 TAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI---DQWNKIIEQLGT 235 (353)
T ss_pred eCCCCCC--------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHhcCC
Confidence 6543221 12346889999999999999999999999999999999999999764321 112111110000
Q ss_pred -------------------------ccHHHH-------------hcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 234 -------------------------TSIEAL-------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 234 -------------------------~~~~~l-------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.....+ ....+.++.++|..||..||++||++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL 309 (353)
T cd07850 236 PSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDAL 309 (353)
T ss_pred CCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHh
Confidence 000010 112466789999999999999999987773
No 242
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.6e-37 Score=309.15 Aligned_cols=255 Identities=18% Similarity=0.266 Sum_probs=196.2
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|++.++||+|+||.||++.+..++..||+|...... ..++..|+++++.++|++++ .+..++..++..+++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIV-GFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCC-eEEEEEeeCCEEEEEee
Confidence 47999999999999999999999999999999854332 23477899999999865544 55555677888999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ..+++..+..++.||+.||.|||+ .+|+|+||||+|||++ .++.+||+|||++........
T Consensus 80 y~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~ 155 (308)
T cd06615 80 HMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDSMA 155 (308)
T ss_pred ccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCCccccccccc
Confidence 99 78999999754 568999999999999999999998 6999999999999995 678899999999876543221
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh-----------
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE----------- 229 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~----------- 229 (473)
....|+..|+|||.+.+..++.++|||||||++|+|++|..||...........+.....
T Consensus 156 ---------~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 156 ---------NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred ---------ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccc
Confidence 345789999999999988899999999999999999999999965332111110100000
Q ss_pred ------------------ccccccHHHH-hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 230 ------------------KKVSTSIEAL-CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 230 ------------------~~~~~~~~~l-~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
.........+ ...++.++.+++.+||..+|++||++.+| +++.|..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l---l~~~~~~ 291 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKEL---TKHPFIK 291 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHH---hcChhhh
Confidence 0000000000 01357889999999999999999997776 5555443
No 243
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.8e-37 Score=307.15 Aligned_cols=246 Identities=21% Similarity=0.312 Sum_probs=196.8
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
..+|++.+.||.|+||.||+|.+..+++.|+||.+.... ...+..|+.+++.++|++++. +..+....+..++++|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e 96 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVN-FLDSFLVGDELFVVME 96 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceee-eeeeEecCceEEEEEE
Confidence 357999999999999999999999999999999854322 345778999999998666554 4445566778899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++. ...+++.+++.++.|++.||.|||++||+|+||||+||+++ .++.+||+|||++........
T Consensus 97 ~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~~kl~dfg~~~~~~~~~~- 170 (296)
T cd06655 97 YLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGSVKLTDFGFCAQITPEQS- 170 (296)
T ss_pred ecCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccchhcccccc-
Confidence 99 889999886 34689999999999999999999999999999999999994 678999999999876543221
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||.+.... .....+..... . ......
T Consensus 171 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~---~~~~~~~~~~~-~-~~~~~~ 239 (296)
T cd06655 171 ------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL---RALYLIATNGT-P-ELQNPE 239 (296)
T ss_pred ------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcCC-c-ccCCcc
Confidence 112357889999999999888999999999999999999999999774331 11222211111 0 111234
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.+++.+.++|.+||..||++||++.+|+
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il 267 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELL 267 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 5789999999999999999999988773
No 244
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.8e-38 Score=305.31 Aligned_cols=243 Identities=22% Similarity=0.327 Sum_probs=197.9
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|++.+.||.|+||.||+|.+..+++.||+|+..... ...+..|+.+++.++|.+++ .+..+...+...++++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT-KYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCee-eeeEEEEECCeEEEEEE
Confidence 57999999999999999999999999999999854332 23578899999999965544 45556667788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++... .+++..++.++.||+.||.|||+++|+|+||+|+||+++ +++.++|+|||+++.+.....
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~- 153 (274)
T cd06609 80 YCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQLTSTMS- 153 (274)
T ss_pred eeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEcccccceeeccccc-
Confidence 99 77999998743 799999999999999999999999999999999999994 688999999999987754321
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+...... .+..
T Consensus 154 ------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~~----~~~~ 220 (274)
T cd06609 154 ------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP---MRVLFLIPKNNPP----SLEG 220 (274)
T ss_pred ------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch---HHHHHHhhhcCCC----CCcc
Confidence 12345788999999999998899999999999999999999999976442 2222222222111 1112
Q ss_pred C-CcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 242 G-YPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 242 ~-~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
. ++.++.+++.+||..+|++||+++++.
T Consensus 221 ~~~~~~~~~~l~~~l~~~p~~Rpt~~~il 249 (274)
T cd06609 221 NKFSKPFKDFVSLCLNKDPKERPSAKELL 249 (274)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHHHh
Confidence 2 789999999999999999999988774
No 245
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=9.2e-38 Score=303.52 Aligned_cols=252 Identities=21% Similarity=0.335 Sum_probs=196.2
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEe------CC
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVE------GD 75 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~------~~ 75 (473)
.-.++|++.+.||.|+||.||+|.+..+++.|++|+..... ...+..|+.+++.+..|+++..+..+... +.
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 34689999999999999999999998899999999854433 35688999999999655666555555433 34
Q ss_pred eEEEEEecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCC
Q 011988 76 YNVLVIDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 151 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 151 (473)
..+++|||+ +++|.+++... +..+++..++.++.||+.||.|||++||+|+||+|+||+++ .++.++|+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEECCCcc
Confidence 589999999 67999988643 35799999999999999999999999999999999999995 678899999999
Q ss_pred cccccCCCCccccccccCCCcccCccccccccccCC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH
Q 011988 152 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK 226 (473)
Q Consensus 152 a~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~ 226 (473)
+......... .....|+..|+|||++.+. .++.++|||||||+||+|++|..||...... ..+..
T Consensus 160 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~ 229 (275)
T cd06608 160 SAQLDSTLGR-------RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM---RALFK 229 (275)
T ss_pred ceecccchhh-------hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH---HHHHH
Confidence 9765432211 1345689999999988643 4678999999999999999999999764322 22222
Q ss_pred HhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 227 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 227 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
+....... . .....++.++.++|..||..||++||++.+|++
T Consensus 230 ~~~~~~~~-~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 230 IPRNPPPT-L-KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hhccCCCC-C-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 22211111 0 011236789999999999999999999888754
No 246
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.9e-37 Score=304.13 Aligned_cols=251 Identities=20% Similarity=0.247 Sum_probs=194.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.++|.+.+.||+|+||.||+|.+..+++.||||++.... ...+.+|+.+++.+.|.+ +..+..+.......+++|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHAN-IVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCC-EeEEEEEEecCCeEEEEE
Confidence 468999999999999999999999999999999854322 224678999999998655 556666677788899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||++++|.+++......+++..+..++.||+.||.|||++||+|+||||+|||++ ..+.+||+|||+++.......
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~~~- 158 (291)
T cd07870 83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKLADFGLARAKSIPSQ- 158 (291)
T ss_pred ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEEeccccccccCCCCC-
Confidence 9999999888765555688999999999999999999999999999999999994 678999999999975433211
Q ss_pred cccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc---------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--------- 231 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~--------- 231 (473)
......++..|+|||.+.+. .++.++|||||||++|||++|..||.+... ..+.+.++....
T Consensus 159 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 159 ------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD--VFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred ------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh--HHHHHHHHHHHcCCCChhhhh
Confidence 11234578999999998764 478999999999999999999999976432 122222211000
Q ss_pred ----------------ccccHHHHhc--CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 ----------------VSTSIEALCR--GYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 ----------------~~~~~~~l~~--~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.......+.. ..+.++.+++.+|+..||.+||++.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l 286 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHh
Confidence 0001111111 1257899999999999999999988764
No 247
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-38 Score=344.37 Aligned_cols=256 Identities=20% Similarity=0.279 Sum_probs=206.1
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCc-----EEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNE-----EVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~-----~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
.+-++.+.||.|.||.||.|......- .||||.+.+. +..+|.+|..+|..++|+|++..+..+.. ....
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-~~~~ 770 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-SGPP 770 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-CCCc
Confidence 457789999999999999999764322 4888875544 24458999999999997777666655544 7788
Q ss_pred EEEEecC-CCCHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecC
Q 011988 78 VLVIDLL-GPSLEDLFNFC------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG 150 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 150 (473)
+|++||| ||+|..+|... ...++..+.+.|+.|||+|++||+++++|||||...|+||+ ....|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---ERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---ccCcEEEcccc
Confidence 9999999 99999999977 55699999999999999999999999999999999999995 66999999999
Q ss_pred CcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhh
Q 011988 151 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISE 229 (473)
Q Consensus 151 la~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 229 (473)
+|+.+-+... |+......-...|||||.+....++.|+|||||||+|||+++ |..||.+.... +.+..+.+
T Consensus 848 lArDiy~~~y-----yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~---~v~~~~~~ 919 (1025)
T KOG1095|consen 848 LARDIYDKDY-----YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF---EVLLDVLE 919 (1025)
T ss_pred hhHhhhhchh-----eeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH---HHHHHHHh
Confidence 9995443332 222222233478999999999999999999999999999999 99999886543 22222222
Q ss_pred ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 230 KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 230 ~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
... -..+..||+.++++|..||+.+|++||+|..|++.+..++..
T Consensus 920 ggR----L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 920 GGR----LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CCc----cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 221 112468999999999999999999999999999988877653
No 248
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=298.83 Aligned_cols=253 Identities=20% Similarity=0.334 Sum_probs=210.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++.+++..||.|+.|+||+++.+.+|..+|||.+.+... ..+.+.++++.....++.|+...+|+..+...+|.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 445677889999999999999999999999999655443 3456666666666668999999999999989999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
++..-++.+++...+++++..+-++...++.||.||-+ +||||||+||+|||+ |..|++||||||++-.+.+...+
T Consensus 172 lMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 172 LMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred HHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeeccccc
Confidence 99999999999888899999999999999999999986 689999999999999 58999999999999888776543
Q ss_pred cccccccCCCcccCccccccccccCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
....|.+.|||||.+.-. .|+.++||||||++|+||+||..||.+.+ ...+.+-++..... +.+.
T Consensus 249 --------trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~--tdFe~ltkvln~eP-P~L~- 316 (391)
T KOG0983|consen 249 --------TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK--TDFEVLTKVLNEEP-PLLP- 316 (391)
T ss_pred --------ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC--ccHHHHHHHHhcCC-CCCC-
Confidence 345899999999998743 58999999999999999999999999864 34555555555332 2221
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
...++++.|.+|+..||.+|+.+||.|.+| |++-|.
T Consensus 317 ~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~L---l~h~Fi 352 (391)
T KOG0983|consen 317 GHMGFSPDFQSFVKDCLTKDHRKRPKYNKL---LEHPFI 352 (391)
T ss_pred cccCcCHHHHHHHHHHhhcCcccCcchHHH---hcCcce
Confidence 124589999999999999999999999877 445443
No 249
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.3e-37 Score=308.75 Aligned_cols=262 Identities=22% Similarity=0.236 Sum_probs=198.3
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeE-------
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGV------- 72 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~------- 72 (473)
..++|.+.++||.|+||.||+|.+..+++.||||++.... ...+.+|+++++.++|++++..+..+..
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 3578999999999999999999999999999999843221 2346789999999998776665544432
Q ss_pred eCCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 73 EGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 73 ~~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
.....+++|+|++.+|.+.+......+++..++.++.||+.||.|||++||+|+||||+|||+ ++++.++|+|||++
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~ 162 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFGLA 162 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCccc
Confidence 234579999999999988887556679999999999999999999999999999999999999 47889999999999
Q ss_pred ccccCCCCcccc----ccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH
Q 011988 153 KRYRDTATHQHI----PYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 153 ~~~~~~~~~~~~----p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i 227 (473)
+........... .........|+..|+|||.+.+. .++.++|||||||++|||++|+.||.+.......+.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~ 242 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL 242 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 866543221110 01112345678899999988764 4789999999999999999999999765433222222111
Q ss_pred hh----------------------ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 228 SE----------------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 228 ~~----------------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.. .............+.+++.++|..||..||++||++.+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 10 0011111222234567899999999999999999987774
No 250
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.6e-38 Score=302.94 Aligned_cols=244 Identities=20% Similarity=0.297 Sum_probs=195.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
.++|++.+.||.|+||.||++. .+++.||+|+.... ....+..|+.+++.++|++.+..+..+ .. +..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-~~-~~~~~v~e~~ 80 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVI-LH-NGLYIVMELM 80 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEE-cC-CCcEEEEECC
Confidence 4679999999999999999987 47888999985443 334678899999999977766665544 33 3468999998
Q ss_pred -CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 85 -GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 85 -g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
+++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+|||++ .++.+||+|||++.......
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEECCCccceeccccC---
Confidence 789999997543 3589999999999999999999999999999999999994 67899999999997643321
Q ss_pred ccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
.....+..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+... ... ....
T Consensus 155 -------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~-~~~---~~~~ 220 (254)
T cd05083 155 -------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL---KEVKECVEKG-YRM---EPPE 220 (254)
T ss_pred -------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH---HHHHHHHhCC-CCC---CCCC
Confidence 12234568999999998899999999999999999997 9999977543 2222222221 111 1235
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
.+|.++.+++..||+.+|++||++++|.+.|+
T Consensus 221 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 221 GCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 67899999999999999999999999988875
No 251
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.2e-37 Score=302.47 Aligned_cols=252 Identities=21% Similarity=0.322 Sum_probs=197.7
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
+|+..+.||+|+||.||+|.+..+++.||+|++.... ...+..|+++++.++|.+++..+ .+..+....+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~-~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRML-GATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhh-ceeccCCeEE
Confidence 5889999999999999999999999999999864332 24578899999999866655544 4556667788
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
++|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++ .....+||+|||++..+..
T Consensus 80 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~--~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 80 LFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID--STGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccccccccccc
Confidence 999998 7899999874 44789999999999999999999999999999999999995 2334699999999987754
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
...... .......|+..|+|||.+.+..++.++|||||||++|+|++|..||..............+...... .
T Consensus 157 ~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~ 230 (268)
T cd06630 157 KGTGAG---EFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTA---P 230 (268)
T ss_pred ccccCC---ccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCC---C
Confidence 322111 0123456889999999999888999999999999999999999999754433322322222211111 1
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.+...+++++.+++.+||..+|++||++.+|+
T Consensus 231 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll 262 (268)
T cd06630 231 SIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262 (268)
T ss_pred CCchhhCHHHHHHHHHHcCCCcccCcCHHHHh
Confidence 22345678999999999999999999988875
No 252
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.5e-37 Score=308.38 Aligned_cols=248 Identities=21% Similarity=0.278 Sum_probs=195.9
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||.|+||.||+|.+..+++.||||.+.... ...+..|+++++.++|. +|..+..+.......+++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHP-FLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCC-CchhheeeeecCCEEEEE
Confidence 47999999999999999999999899999999865433 23477899999999854 555555666778889999
Q ss_pred EecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 81 IDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|||+ +++|.+++... ...+++..++.++.||+.||+|||+.||+|+||||+||||+ .++.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEeecchhhccccc
Confidence 9998 88999998743 35699999999999999999999999999999999999995 6789999999998765432
Q ss_pred CCcccc----------------------ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Q 011988 159 ATHQHI----------------------PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 216 (473)
Q Consensus 159 ~~~~~~----------------------p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~ 216 (473)
...... .......+.||..|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 211000 0011234578999999999999889999999999999999999999997644
Q ss_pred CCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCC
Q 011988 217 AGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPD 264 (473)
Q Consensus 217 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt 264 (473)
. ...+..+........ ....++.++.++|..||..||++||+
T Consensus 237 ~---~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 237 R---DETFSNILKKEVTFP---GSPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred h---HHHHHHHhcCCccCC---CccccCHHHHHHHHHHccCCHhHCCC
Confidence 3 233333332222111 01226899999999999999999999
No 253
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-39 Score=299.73 Aligned_cols=248 Identities=21% Similarity=0.229 Sum_probs=208.7
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----------chhHHHHHHHHHHhcCCCCCCeeEEeeEeC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----------HPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~ 74 (473)
-++|.-.+.||.|..+.|-.+.++.++..+|+|++.... .+.-..|+.||+++.+|++|..+..+...+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 356778889999999999999999999999999843321 122457999999999999999999999999
Q ss_pred CeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 75 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 75 ~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
.+.++|+|+| .|.|.|++.. .-.++++....|+.|+++|++|||.++||||||||+|||+ +++.++||+|||+|+
T Consensus 96 sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFAC 171 (411)
T ss_pred chhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccceee
Confidence 9999999999 8899999983 4569999999999999999999999999999999999999 588999999999999
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCC------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGI------EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~------~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i 227 (473)
.+..... ....+||+.|+|||.+... .|+..+|+|++|||||.|+.|..||...+ ....+..|
T Consensus 172 ~l~~Gek--------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk---QmlMLR~I 240 (411)
T KOG0599|consen 172 QLEPGEK--------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK---QMLMLRMI 240 (411)
T ss_pred ccCCchh--------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH---HHHHHHHH
Confidence 8765432 2457999999999998743 37889999999999999999999996532 23344556
Q ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 228 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.+.+....-+ -+.+++.+.++||.+||..||.+|.|+++++
T Consensus 241 meGkyqF~sp-eWadis~~~KdLIsrlLqVdp~~Ritake~L 281 (411)
T KOG0599|consen 241 MEGKYQFRSP-EWADISATVKDLISRLLQVDPTKRITAKEAL 281 (411)
T ss_pred HhcccccCCc-chhhccccHHHHHHHHHeeCchhcccHHHHh
Confidence 6666544333 3467889999999999999999999988774
No 254
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=9.2e-38 Score=313.54 Aligned_cols=253 Identities=17% Similarity=0.217 Sum_probs=188.3
Q ss_pred EEeeEeec--CceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 11 LGRKIGSG--SFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 11 i~~~LG~G--~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
++++||+| +|++||++.+..+|+.||||.+.... ...+..|+.+++.++|++++ .+..++..++..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv-~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIV-PYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCee-eEEEEEEECCEEEEEEec
Confidence 56789999 78999999999999999999864432 23467899999999865555 455566777889999999
Q ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 84 L-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 84 ~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.++|+||+.+.........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcccchhhcccccccc
Confidence 9 78999998643 34599999999999999999999999999999999999995 6788999999876544322111
Q ss_pred cccccccCCCcccCccccccccccC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS------ 233 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------ 233 (473)
............++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ....+ .....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~-~~~~~~~~~~~ 234 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKL-NGTVPCLLDTT 234 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHHh-cCCcccccccc
Confidence 1000001123457788999999986 3589999999999999999999999976432111 11111 00000
Q ss_pred -----------------------------------ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 234 -----------------------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 234 -----------------------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.........+++++.+|+..||+.||++||++++|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0000112235678999999999999999999887743
No 255
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.6e-37 Score=299.23 Aligned_cols=245 Identities=22% Similarity=0.273 Sum_probs=198.1
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|++.+.||+|+||.||+|.+..+++.||||.+.... ...+..|+.+++.++|.+.+. +..........+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~-~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIE-YYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhh-eeeeEecCCEEEEEEe
Confidence 5999999999999999999999999999999854332 345788999999998655554 4445567788899999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++ ++.+.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCceecCCCcc
Confidence 99 78999999754 34589999999999999999999999999999999999995 3456789999999987654321
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
.....|+..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+..... ..+.
T Consensus 158 --------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~ 222 (256)
T cd08220 158 --------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---PALVLKIMSGTF----APIS 222 (256)
T ss_pred --------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---HHHHHHHHhcCC----CCCC
Confidence 1235688999999999988899999999999999999999999976433 222233222211 1233
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..++.++.+++..||..+|++||++.+|..
T Consensus 223 ~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 223 DRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 467899999999999999999999888753
No 256
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.9e-38 Score=305.95 Aligned_cols=259 Identities=20% Similarity=0.286 Sum_probs=199.9
Q ss_pred CCceEEEeeEeecCceEEEEEEEc----CCCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEe--CC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNI----QTNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVE--GD 75 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~----~~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~--~~ 75 (473)
...|++.+.||+|+||.||+|... .+++.||||+...... ..+..|+++++.+.|.+++..+ .++.. ..
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~-~~~~~~~~~ 81 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYK-GVCEKPGGR 81 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEE-eeeecCCCC
Confidence 356889999999999999999864 3478999998654433 4688999999999866555544 44444 55
Q ss_pred eEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
..+++|||+ +++|.+++......+++..++.++.||+.||+|||++||+|+||||+|||++ .++.++|+|||++..
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~ 158 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---SEDLVKISDFGLAKV 158 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccccccc
Confidence 789999999 7899999986655799999999999999999999999999999999999994 678999999999987
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCH-----------HHH
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-----------KQK 223 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-----------~~~ 223 (473)
....... +.......++..|++||.+.+..++.++|||||||++|||++|..||........ ...
T Consensus 159 ~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05038 159 LPEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR 234 (284)
T ss_pred cccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHH
Confidence 6532211 1111223456679999999988999999999999999999999999865332110 111
Q ss_pred HHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 224 YEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 224 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
........... .....+|.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 235 ~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 235 LLELLKEGERL---PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHcCCcC---CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11111111110 11235678999999999999999999999999998865
No 257
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.9e-37 Score=302.92 Aligned_cols=254 Identities=21% Similarity=0.241 Sum_probs=195.2
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
++|++.+.||.|+||.||+|.+..+++.||||..... ....+..|+++++.+.|+ ++..+..+.......++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCC-CEeeEEEEEecCCeEEEEE
Confidence 6799999999999999999999989999999985332 224578899999999865 4555666667778999999
Q ss_pred ecCCCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||++++|.+++..... .+++..++.++.||+.||+|||++||+|+||||+||+++ ...+.+||+|||++........
T Consensus 81 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~--~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 81 EYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred ecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE--CCCCEEEEcccccccccCCCcc
Confidence 9998899888864332 368889999999999999999999999999999999996 3456799999999976533211
Q ss_pred ccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc---------
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--------- 230 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~--------- 230 (473)
......++..|+|||.+.+. .++.++|||||||++|+|++|..||..................
T Consensus 159 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 159 -------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGV 231 (294)
T ss_pred -------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccc
Confidence 11234678899999998764 5789999999999999999999999764322111111110000
Q ss_pred ------------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 231 ------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 231 ------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
............+++++.+++.+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011122223467889999999999999999999888754
No 258
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.6e-37 Score=303.44 Aligned_cols=251 Identities=20% Similarity=0.306 Sum_probs=194.9
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEe-----CCeE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVE-----GDYN 77 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~-----~~~~ 77 (473)
..++|.+.+.||+|+||.||+|.+..+++.||+|+.... ....+..|+.+++.+..|+++..+..++.. ....
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 457899999999999999999999999999999986443 234577899999999555666555544432 2457
Q ss_pred EEEEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 78 VLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
+++|||+ +++|.++++. ....+++..++.++.|++.||+|||++||+|+||||+||+++ ..+.+||+|||++.
T Consensus 100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~---~~~~~kl~dfg~~~ 176 (291)
T cd06639 100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT---TEGGVKLVDFGVSA 176 (291)
T ss_pred EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEeecccch
Confidence 9999999 7899998863 345789999999999999999999999999999999999994 67889999999998
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCCC-----CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 228 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~ 228 (473)
........ .....|+..|+|||.+.... ++.++|||||||++|||++|+.||..... ...+..+.
T Consensus 177 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~---~~~~~~~~ 246 (291)
T cd06639 177 QLTSTRLR-------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP---VKTLFKIP 246 (291)
T ss_pred hccccccc-------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH---HHHHHHHh
Confidence 65432211 12346889999999986433 68999999999999999999999976532 22222322
Q ss_pred hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 229 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 229 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
....... .....++.++.++|.+||..+|++||++.+|.+
T Consensus 247 ~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 247 RNPPPTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cCCCCCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 2211110 012345678999999999999999999888754
No 259
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.3e-37 Score=300.41 Aligned_cols=246 Identities=24% Similarity=0.317 Sum_probs=193.8
Q ss_pred eeEeecCceEEEEEEEcC-CC--cEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSGSFGEIYLGTNIQ-TN--EEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~-~~--~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
+.||+|+||.||+|.+.. .+ ..||||.+..... ..+..|+.+++.++|++++..+..+. . ...+++|||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-T-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-C-CeEEEEEEecC
Confidence 468999999999999865 33 3689998655433 35788999999999776666554443 3 7889999998
Q ss_pred CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+|||++ .++.+||+|||+++.+......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~-- 153 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALPQNEDH-- 153 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEeccccccccccccccc--
Confidence 889999987544 4689999999999999999999999999999999999995 6689999999999876543221
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 242 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 242 (473)
+.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+...... ......
T Consensus 154 --~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~~~~~---~~~~~~ 225 (257)
T cd05040 154 --YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG---SQILKKIDKEGER---LERPEA 225 (257)
T ss_pred --eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHhcCCc---CCCCcc
Confidence 111223467789999999998899999999999999999998 9999976533 2223332221111 112245
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 243 YPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 243 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
+|..+.+++..||..+|++||++.+|.+.|.
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 226 CPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 7899999999999999999999999988774
No 260
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.4e-37 Score=303.81 Aligned_cols=254 Identities=22% Similarity=0.317 Sum_probs=204.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|++.+.||+|+||.||++.+..+++.||||++... ....+..|+++++.+.|. +|..+..+...+...+++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHP-FLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCC-CccceeeEEEcCCeEEEE
Confidence 5799999999999999999999999999999985432 234577899999999954 555555666777889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++... ..+++..++.++.||+.||.|||++||+|+||+|.||||+ .++.+||+|||+++......
T Consensus 80 ~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 80 MEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEeeCCCccccCCCC
Confidence 9999 99999998753 5799999999999999999999999999999999999994 67899999999998764431
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
....|+..|+|||.+.+..++.++||||||+++|+|++|..||.... .......+..... .+
T Consensus 156 ----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~-----~~ 217 (290)
T cd05580 156 ----------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN---PIQIYEKILEGKV-----RF 217 (290)
T ss_pred ----------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCc-----cC
Confidence 24578999999999998889999999999999999999999997644 2233333332211 12
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCcccccccc
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKP-----DYAYLKRLFRDLFIREGFQFDYVFDWTILK 293 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RP-----t~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 293 (473)
...++..+.++|.+||..||.+|+ +++++ +++ ++....+|....
T Consensus 218 ~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l---~~~-------~~~~~~~~~~~~ 266 (290)
T cd05580 218 PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDI---KNH-------PWFAGIDWIALL 266 (290)
T ss_pred CccCCHHHHHHHHHHccCCHHHccCcccCCHHHH---HcC-------cccccCCHHHHh
Confidence 345689999999999999999998 44444 322 334456677664
No 261
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3e-37 Score=305.94 Aligned_cols=259 Identities=19% Similarity=0.210 Sum_probs=195.0
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEe------
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVE------ 73 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~------ 73 (473)
..++|++.++||.|+||.||+|.+..+++.||||.+.... ...+..|+.+++.+.|++++..+..+...
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3467999999999999999999999999999999853321 22356799999999977777666544332
Q ss_pred -CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 74 -GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 74 -~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
....++||||++++|.+++......+++.+++.++.||+.||+|||++||+|+||||+|||++ ..+.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~ 166 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFGLA 166 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC---CCCcEEECcCCCc
Confidence 235699999999999999876555799999999999999999999999999999999999994 7789999999999
Q ss_pred ccccCCCCccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 231 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 231 (473)
..+....... ........++..|+|||.+.+.. ++.++|||||||++|||++|..||.+.........+..+....
T Consensus 167 ~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 167 RAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred ccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 8765432211 01113446788999999987654 7899999999999999999999997754322222222211100
Q ss_pred c------------------cc-----cHHHHh-cCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 V------------------ST-----SIEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 ~------------------~~-----~~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
. .. ....+. ...+..+.++|..||..||++||++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 0 00 000000 01246778999999999999999988775
No 262
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.1e-37 Score=301.77 Aligned_cols=254 Identities=21% Similarity=0.277 Sum_probs=197.2
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
++|++.++||+|+||.||+|.+..+++.||||++... ....+..|+++++.+.|.+ +..+..++...+..+++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHEN-IVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCC-eeehhheEEECCEEEEEE
Confidence 5799999999999999999999999999999984332 2356889999999999555 445555566788899999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
||+++++.+.+......+++..++.++.||+.||.|||++||+|+||+|+||+++ +.+.+||+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEEeeecccccCCCccc
Confidence 9997776666554556799999999999999999999999999999999999994 6889999999999876543320
Q ss_pred cccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh-----------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE----------- 229 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~----------- 229 (473)
......++..|+|||++.+. .++.++|||||||++|+|++|..||.+....+.......+..
T Consensus 157 ------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 157 ------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred ------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 11345788999999999988 789999999999999999999999976433211111111100
Q ss_pred ------------ccccccHHH-HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 230 ------------KKVSTSIEA-LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 230 ------------~~~~~~~~~-l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
......... ....++.++.++|..||..+|++||++++|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000001111 12235899999999999999999999887753
No 263
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.4e-37 Score=302.37 Aligned_cols=248 Identities=24% Similarity=0.335 Sum_probs=192.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--------chhHHHHHHHHHHhcCCCCCCeeEEeeE-eCCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--------HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--------~~~l~~E~~il~~L~~~~~i~~~~~~~~-~~~~~ 77 (473)
.+|++.+.||+|+||.||+|.+..++..|++|+..... ...+..|+.+++.++|++++..+..+.. .....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 57999999999999999999999999999999853321 1347789999999987666655544433 24678
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+++|||+ +++|.+++.. ...+++..++.++.||+.||+|||+++|+||||||+||++ +.++.+||+|||+++...
T Consensus 82 ~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCccccc
Confidence 8999999 7799999874 3468999999999999999999999999999999999999 467889999999997654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
...... .......++..|+|||.+.+..++.++|||||||++|||++|+.||..... .+.+........ .
T Consensus 158 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---~~~~~~~~~~~~---~ 227 (266)
T cd06651 158 TICMSG----TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---MAAIFKIATQPT---N 227 (266)
T ss_pred cccccC----CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---HHHHHHHhcCCC---C
Confidence 321100 011234688999999999998899999999999999999999999976432 222222221111 1
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
..+...+++.+.+++ .||..+|++||++++|+
T Consensus 228 ~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 228 PQLPSHISEHARDFL-GCIFVEARHRPSAEELL 259 (266)
T ss_pred CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHh
Confidence 122334678888998 68889999999988874
No 264
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-38 Score=317.84 Aligned_cols=254 Identities=22% Similarity=0.312 Sum_probs=209.4
Q ss_pred EEEeeEeecCceEEEEEEEcCC--Cc--EEEEEEccc----CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 10 RLGRKIGSGSFGEIYLGTNIQT--NE--EVAIKLNVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~--~~--~vAiK~~~~----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.+.++||.|-||.||+|..... |+ -||||..+. .+.+.|..|.-+|+.+.|+++|..+..+. ....||||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~--e~P~Wivm 469 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV--EQPMWIVM 469 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee--ccceeEEE
Confidence 3457899999999999986532 33 488887443 33556899999999999877777665443 34579999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|++ -|-|..+++..+..++..+...++.||+.||.|||++.+|||||...|||++ ...+|||+|||+++.+.+...
T Consensus 470 EL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLaDFGLSR~~ed~~y 546 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLADFGLSRYLEDDAY 546 (974)
T ss_pred ecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeecccchhhhccccch
Confidence 999 8899999998888899999999999999999999999999999999999995 778999999999998877653
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
.......-..-|||||.+.-..++.++|||-|||++||++. |..||++.++.+....+++... ...
T Consensus 547 ------YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR-------lP~ 613 (974)
T KOG4257|consen 547 ------YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER-------LPC 613 (974)
T ss_pred ------hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC-------CCC
Confidence 22223333567999999999999999999999999999987 9999999887654444433222 223
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCC
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGF 281 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~ 281 (473)
++.||+.++.|+.+||.++|.+||++.+|+..|.++++.+..
T Consensus 614 P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~ 655 (974)
T KOG4257|consen 614 PPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKI 655 (974)
T ss_pred CCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhh
Confidence 568999999999999999999999999999999999986553
No 265
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.1e-38 Score=307.57 Aligned_cols=252 Identities=17% Similarity=0.267 Sum_probs=195.9
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.++|++.++||+|+||+||++.+..+++.||+|+..... ...+..|+++++.++|+ ++..+..+.......++||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSP-YIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCC-CcceEeeeEecCCEEEEEE
Confidence 367999999999999999999999999999999843322 34578899999999854 4555555566678899999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||+ +++|.+++.. .+.+++..+..++.|++.||.|||+ .+|+||||||+||+++ +.+.++|+|||++.......
T Consensus 83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 83 EFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred ecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCCcEEEccCCcccchhhhc
Confidence 999 7799988874 4568999999999999999999997 6999999999999994 67899999999987553322
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC----HHHHHHHHhhcccccc
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT----KKQKYEKISEKKVSTS 235 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~----~~~~~~~i~~~~~~~~ 235 (473)
. ....|+..|+|||++.+..++.++|||||||++|+|++|..||....... ....+...........
T Consensus 159 ~---------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd06620 159 A---------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP 229 (284)
T ss_pred c---------CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc
Confidence 1 23578999999999998889999999999999999999999998644310 0000111111111010
Q ss_pred HHHHh-cCCcHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011988 236 IEALC-RGYPTEFASYFHYCRSLRFDDKPDYAYLKRL 271 (473)
Q Consensus 236 ~~~l~-~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~ 271 (473)
...+. ..++.++.+++.+||..||++||++.++.+.
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 230 PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11111 1367899999999999999999999888653
No 266
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.2e-37 Score=304.74 Aligned_cols=245 Identities=21% Similarity=0.331 Sum_probs=197.6
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
...|+..++||.|+||.||+|.+..++..||||+..... ...+..|+.+++.+.| +++..+..++......++||
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEECCEEEEEE
Confidence 356889999999999999999998899999999855432 2347789999999975 55555666677788999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|.+++. ..++++..+..++.|++.||.|||+++++|+||+|+||+++ ..+.++|+|||++........
T Consensus 82 e~~~~~~L~~~i~--~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 82 EYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred ecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEEcccccceeccCCcc
Confidence 999 779999886 35689999999999999999999999999999999999995 678899999999976643221
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......++..|+|||++.+..++.++|||||||++|||++|..||...... .....+..... ..+.
T Consensus 157 -------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~----~~~~ 222 (277)
T cd06640 157 -------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM---RVLFLIPKNNP----PTLT 222 (277)
T ss_pred -------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH---hHhhhhhcCCC----CCCc
Confidence 112346888999999999888999999999999999999999999865432 11111111111 1223
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..++.++.+++..||..+|++||++.+++.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 356789999999999999999999988843
No 267
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.9e-37 Score=312.59 Aligned_cols=255 Identities=21% Similarity=0.223 Sum_probs=196.7
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEe----CC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVE----GD 75 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~----~~ 75 (473)
+.++|.+.+.||.|+||.||+|.+..+++.||||.+... ....+..|+.+++.++|.+++..+..+... ..
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 678999999999999999999999999999999985432 233567899999999876666555433322 13
Q ss_pred eEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 76 YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 76 ~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
..+++|||++++|.+++.. ...+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||+++..
T Consensus 83 ~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---ANCDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECcCcccccc
Confidence 5799999999999999874 45799999999999999999999999999999999999994 6789999999999866
Q ss_pred cCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh-----
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE----- 229 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~----- 229 (473)
..... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.........+.....
T Consensus 159 ~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 159 SEKGD-------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE 231 (337)
T ss_pred CCCcc-------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence 44321 1134568899999998875 4589999999999999999999999976432111111111000
Q ss_pred ------------------ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 230 ------------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 230 ------------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.............+++++.++|.+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 232 DLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred HhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence 00011122334567899999999999999999999877743
No 268
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.8e-37 Score=297.05 Aligned_cols=244 Identities=23% Similarity=0.336 Sum_probs=193.0
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
++||.|+||.||+|.+.. ++.||+|+...... ..+..|+++++.+.|. ++..+..++......+++|||+ +++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHP-NIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCC-CeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 479999999999999877 99999998554332 3578899999999855 5555666667778889999998 889
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccc
Q 011988 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167 (473)
Q Consensus 88 L~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~ 167 (473)
|.+++......+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|||++..........
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~~~~~~----- 150 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSREEEGGIYTV----- 150 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeeccccccccCCccee-----
Confidence 9999876556789999999999999999999999999999999999994 77899999999997654221100
Q ss_pred cCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHH
Q 011988 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 246 (473)
Q Consensus 168 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 246 (473)
......++..|+|||.+.+..++.++|||||||++|||++ |..||......... ..+... ... .....+|.+
T Consensus 151 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~---~~~~~~-~~~---~~~~~~~~~ 223 (251)
T cd05041 151 SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR---ERIESG-YRM---PAPQLCPEE 223 (251)
T ss_pred ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH---HHHhcC-CCC---CCCccCCHH
Confidence 0012234567999999998889999999999999999998 89999775432222 222111 111 113457899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 247 FASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 247 l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
+.+++.+||..+|++||++.+|++.|+
T Consensus 224 ~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 224 IYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 999999999999999999999988775
No 269
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.2e-37 Score=298.72 Aligned_cols=253 Identities=23% Similarity=0.301 Sum_probs=199.9
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|++.+.||.|+||+||+|.+..++..|++|+..... ...+..|+.+++.++|.++ ..+.......+..+++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNV-VKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCE-EEEEEEEeeCCEEEEEEe
Confidence 57999999999999999999998899999999854332 3557889999999986554 445555667788899999
Q ss_pred cC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 83 LL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~--~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
++ +++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++ +++.++|+|||++..+....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSVKIADFGVSASLADGG 156 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccchHHHhccCc
Confidence 99 889999987532 4689999999999999999999999999999999999995 67889999999998776543
Q ss_pred CccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
... ........|+..|++||++... .++.++|||||||++|+|++|+.||...... ..+.+....... ....
T Consensus 157 ~~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~-~~~~ 229 (267)
T cd06610 157 DRT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM---KVLMLTLQNDPP-SLET 229 (267)
T ss_pred ccc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh---hhHHHHhcCCCC-CcCC
Confidence 221 0112445789999999998877 6899999999999999999999999765432 222222221111 1111
Q ss_pred H--hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 239 L--CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 239 l--~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
. ...+++++.+++..||..||++||++.+|++
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1 1357899999999999999999999887754
No 270
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.6e-37 Score=300.40 Aligned_cols=251 Identities=22% Similarity=0.277 Sum_probs=195.9
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
+|++.++||.|++|.||+|++..+++.||||++... ....+..|+.+++.++| +++..+..++......+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH-ENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC-CCEeeeeeeEeeCCcEEEEEec
Confidence 599999999999999999999999999999985432 23456789999999975 5566666667777888999999
Q ss_pred CCCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 84 LGPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 84 ~g~sL~~~l~~~~--~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++ +++.++|+|||++........
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 80 MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred CCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcEEEeecchhhhhcCCcc-
Confidence 9889999887543 4689999999999999999999999999999999999994 678999999999975543211
Q ss_pred cccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc--------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-------- 232 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 232 (473)
......++..|++||++.+. .++.++|||||||++|+|++|+.||.+.........+........
T Consensus 156 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 156 ------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred ------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 11234678899999998764 478999999999999999999999987543222211111100000
Q ss_pred -------------cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 233 -------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 233 -------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
......+...++.++.++|..||+.||++||++.+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 279 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDAL 279 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHh
Confidence 0011222345678999999999999999999988775
No 271
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.5e-37 Score=300.16 Aligned_cols=246 Identities=22% Similarity=0.286 Sum_probs=199.5
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeE-eCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~-~~~~~~lv~ 81 (473)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ...+..|+.+++.++|++++..+..+.. .+...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 5899999999999999999999999999999854322 2347789999999997776665554433 456679999
Q ss_pred ecC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH-----hCCCcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 82 DLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVH-----SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 82 e~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH-----~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
||+ +++|.+++... ...+++..++.++.||+.||.||| +.+|+|+||||+||+++ ..+.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEEEeccccc
Confidence 999 78999998754 457999999999999999999999 99999999999999995 6789999999999
Q ss_pred ccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 232 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 232 (473)
......... .....|+..|+|||++.+..++.++||||||+++|+|++|..||.... .......+.....
T Consensus 158 ~~~~~~~~~-------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~ 227 (265)
T cd08217 158 KILGHDSSF-------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---QLQLASKIKEGKF 227 (265)
T ss_pred ccccCCccc-------ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---HHHHHHHHhcCCC
Confidence 876543211 123468999999999999889999999999999999999999998743 2233333332222
Q ss_pred cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 233 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 233 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..+...++.++.+++..||..+|++||++.+|++
T Consensus 228 ----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 228 ----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 1234567899999999999999999999988864
No 272
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.8e-37 Score=296.01 Aligned_cols=243 Identities=20% Similarity=0.307 Sum_probs=190.6
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
++||.|+||.||+|.. .++..||+|+...... ..+..|+.+++.+.|.+++ .+..++......+++|||+ +++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIV-KLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcC-eEEEEEecCCccEEEEECCCCCc
Confidence 4689999999999985 4688999998554332 2477899999999865544 4555566677889999998 889
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccc
Q 011988 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167 (473)
Q Consensus 88 L~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~ 167 (473)
|.+++......+++..++.++.|++.||.|||++|++||||||+||+++ .++.+||+|||++.........
T Consensus 79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~~~~~------ 149 (250)
T cd05085 79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSRQEDDGIYS------ 149 (250)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCCccceeccccccc------
Confidence 9999875556789999999999999999999999999999999999994 6788999999999754332111
Q ss_pred cCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHH
Q 011988 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 246 (473)
Q Consensus 168 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 246 (473)
......++..|+|||++.+..++.++|||||||++|++++ |..||.+.... .....+..... . .....++.+
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~---~~~~~~~~~~~-~---~~~~~~~~~ 222 (250)
T cd05085 150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ---QAREQVEKGYR-M---SCPQKCPDD 222 (250)
T ss_pred cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcCCC-C---CCCCCCCHH
Confidence 1112244677999999998889999999999999999998 99999875432 22222221111 1 123457899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 247 FASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 247 l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
+.+++.+||..+|++||++.++.+.|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 999999999999999999999987764
No 273
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.7e-37 Score=301.92 Aligned_cols=251 Identities=20% Similarity=0.218 Sum_probs=194.5
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|++++.||.|+||.||+|++..+++.||||.+.... ...+..|+++++.++|++++. +..+.......+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~-~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK-LLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcc-hhhhcccCCcEEEEee
Confidence 5899999999999999999999999999999854322 235788999999998665555 4445567778899999
Q ss_pred cCCCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LLGPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+.++|.+++... ...+++..++.++.||+.||+|||++||+|+||+|+||+++ .++.+||+|||++..+.....
T Consensus 80 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 80 FLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred ccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEeeccchhhcccCcc-
Confidence 9988999988743 35689999999999999999999999999999999999994 778999999999876543211
Q ss_pred cccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc----------
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK---------- 230 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~---------- 230 (473)
......++..|+|||++.+.. ++.++|||||||++|||++|+.||.+.........+......
T Consensus 156 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 156 ------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred ------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 112335688999999987754 588999999999999999999999764322111111110000
Q ss_pred -----------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 -----------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 -----------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
........+...+++++.++|.+||..||++||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 001112233345788999999999999999999988775
No 274
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-37 Score=306.95 Aligned_cols=247 Identities=22% Similarity=0.304 Sum_probs=195.7
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.++|.+.+.||.|+||.||+|.+..+++.||||.+.... ...+..|+.+++.+.|.++ ..+..++..+...++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNI-VNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCE-eeEEEEEecCCEEEEeec
Confidence 478999999999999999999999999999999854322 3346788999999876554 445555567788899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++. ...+++..+..++.|++.||.|||+.||+||||||+|||++ .++.++|+|||++.........
T Consensus 97 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 97 YLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred ccCCCCHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEECcCccceEccCCccC
Confidence 99 889999986 34689999999999999999999999999999999999994 6789999999999765433211
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
.....++..|+|||.+.+..++.++|||||||++|+|++|..||.+...... ...+.... ........
T Consensus 172 -------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~---~~~~~~~~--~~~~~~~~ 239 (297)
T cd06656 172 -------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATNG--TPELQNPE 239 (297)
T ss_pred -------cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh---eeeeccCC--CCCCCCcc
Confidence 1235788999999999998899999999999999999999999976433111 11111100 00011124
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.++..+.+++.+||..+|++||++.+|++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 56788999999999999999999887744
No 275
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.4e-37 Score=303.34 Aligned_cols=252 Identities=23% Similarity=0.280 Sum_probs=193.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
++|++.++||+|+||.||+|.+..+++.||+|+..+.. ...+..|+++++.+.|.+++ .+..+...+...+++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLV-NLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchh-hHHHhcccCCeEEEEE
Confidence 57999999999999999999998899999999843322 23577899999999865554 4445556778899999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|..+.. ....+++..++.++.||+.||.|||+.||+|+||+|+||+++ +++.++|+|||++........
T Consensus 80 e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~---~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 80 EFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred ecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCcEEEEeeeeeeeccCCcc
Confidence 999 445555544 345699999999999999999999999999999999999994 678999999999986544321
Q ss_pred ccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc---------
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--------- 230 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~--------- 230 (473)
......++..|+|||++.+. .++.++|||||||++|||++|..||...........+......
T Consensus 156 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 156 -------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred -------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHh
Confidence 11235688999999998764 4788999999999999999999999764321111111110000
Q ss_pred --------------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 231 --------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 231 --------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
...........+++..+.+++..||..+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0011122234567899999999999999999999887753
No 276
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.3e-37 Score=312.81 Aligned_cols=257 Identities=19% Similarity=0.239 Sum_probs=195.5
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEe--------
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVE-------- 73 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~-------- 73 (473)
++++|.+.+.||.|+||.||+|.+..+++.||||++.... ...+..|+.+++.++|.+++..+..+...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 5789999999999999999999999999999999854332 34578899999999877666555433322
Q ss_pred -----CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEe
Q 011988 74 -----GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148 (473)
Q Consensus 74 -----~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 148 (473)
....+++|||++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+|||++ ...+.+||+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~~kl~d 158 (342)
T cd07854 83 GSLTELNSVYIVQEYMETDLANVLE--QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLVLKIGD 158 (342)
T ss_pred ccccccceEEEEeecccccHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCceEEECC
Confidence 23578999999989998886 34699999999999999999999999999999999999995 3456799999
Q ss_pred cCCcccccCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH
Q 011988 149 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 149 FGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i 227 (473)
||+++......... .......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.............
T Consensus 159 fg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 159 FGLARIVDPHYSHK----GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred cccceecCCccccc----cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 99997654321111 01123367889999998765 45889999999999999999999999765432111111000
Q ss_pred ----------------------hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 228 ----------------------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 228 ----------------------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
...........+...++.++.++|..||..||++||++.+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 298 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL 298 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHh
Confidence 000111222333456788999999999999999999988774
No 277
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.9e-37 Score=312.11 Aligned_cols=258 Identities=18% Similarity=0.245 Sum_probs=198.6
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeE---eCCe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGV---EGDY 76 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~---~~~~ 76 (473)
++++|++.+.||.|+||.||+|.+..+++.||+|++... ....+..|+.+++.++|.+++..+..+.. ....
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 568999999999999999999999999999999985432 23456789999999996665554443322 3457
Q ss_pred EEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 77 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
.+++|||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 83 ~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 83 VYVVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---EDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEecccccceeec
Confidence 899999999999998863 45699999999999999999999999999999999999994 78899999999998765
Q ss_pred CCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH--------
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI-------- 227 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i-------- 227 (473)
...... ........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.........+...
T Consensus 159 ~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 159 SSPTEH---KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred ccCcCC---CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 432211 011134578999999999876 45899999999999999999999999765432111111110
Q ss_pred ---------------hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 228 ---------------SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 228 ---------------~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
...........+...++.++.++|..||+.+|++||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 292 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL 292 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 001111122334466789999999999999999999987663
No 278
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-37 Score=329.55 Aligned_cols=255 Identities=20% Similarity=0.239 Sum_probs=184.6
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCC-cEEEEE------------------Eccc--CCchhHHHHHHHHHHhcCCCC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTN-EEVAIK------------------LNVK--TKHPQLQYEAKLYKILQGGTG 63 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~-~~vAiK------------------~~~~--~~~~~l~~E~~il~~L~~~~~ 63 (473)
+.++|+++++||+|+||+||+|...... +.+++| .... .....+.+|+.+++.|+|+++
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998764322 222222 1111 112347889999999986655
Q ss_pred CCeeEEeeEeCCeEEEEEecCCCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCC
Q 011988 64 IPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 139 (473)
Q Consensus 64 i~~~~~~~~~~~~~~lv~e~~g~sL~~~l~~~~----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~ 139 (473)
+ .+..+....+..++++++++++|.+++.... .......++.|+.||+.||.|||++|||||||||+||||+
T Consensus 226 v-~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~--- 301 (501)
T PHA03210 226 L-KIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN--- 301 (501)
T ss_pred C-cEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---
Confidence 5 4555667778889999999999988875321 2244677889999999999999999999999999999994
Q ss_pred CCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 011988 140 RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT 219 (473)
Q Consensus 140 ~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~ 219 (473)
..+.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||+||||++|..++.......
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~ 375 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREA------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGK 375 (501)
T ss_pred CCCCEEEEeCCCceecCccccc------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCC
Confidence 7789999999999876543221 1134679999999999999999999999999999999999876543322222
Q ss_pred HHHHHHHHhhc------cc-------------------cccHHHHh--cCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 220 KKQKYEKISEK------KV-------------------STSIEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 220 ~~~~~~~i~~~------~~-------------------~~~~~~l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
....+.++... .+ ...+..+. ..++.++.++|.+||.+||.+||++.+++
T Consensus 376 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL 452 (501)
T PHA03210 376 PGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL 452 (501)
T ss_pred HHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence 22222221110 00 00111111 24677889999999999999999988874
No 279
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.3e-37 Score=299.40 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=192.8
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--------chhHHHHHHHHHHhcCCCCCCeeEEeeEe-CCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--------HPQLQYEAKLYKILQGGTGIPNLRWFGVE-GDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--------~~~l~~E~~il~~L~~~~~i~~~~~~~~~-~~~~ 77 (473)
.+|++.+.||+|+||.||+|.+..++..||||...... ...+..|+.+++.+.|++++..+..+... ....
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57999999999999999999999999999999743211 12467799999999866666554433332 4567
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+++|||+ +++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+|||++ ..+.++|+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD---SVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---CCCCEEECcCccccccc
Confidence 8999999 78999998743 4689999999999999999999999999999999999994 67899999999998654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
..... ........|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+.......
T Consensus 158 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~-- 228 (265)
T cd06652 158 TICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA---MAAIFKIATQPTNP-- 228 (265)
T ss_pred ccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch---HHHHHHHhcCCCCC--
Confidence 32110 0112345689999999999988899999999999999999999999976432 22222222211111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.+...++..+.++|..|| .+|++||++++|++
T Consensus 229 -~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 229 -VLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred -CCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 122345678999999999 49999999888753
No 280
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.3e-37 Score=296.00 Aligned_cols=248 Identities=21% Similarity=0.292 Sum_probs=196.4
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
.+|++.+.||.|+||.||+|.+. .+..+|+|...... ...+..|+++++.+.|++++ .+..+.......+++|||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLV-QLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCee-eEEEEEccCCceEEEEEcC
Confidence 57999999999999999999874 46789999854432 35688999999999866544 4555556667789999998
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++......+++..++.++.|++.||+|||++||+|+||||+||+++ .++.+||+|||++.........
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~~-- 156 (256)
T cd05112 82 EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVLDDQYT-- 156 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcceeecccCccc--
Confidence 7899999876566789999999999999999999999999999999999994 6788999999999765432211
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 242 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 242 (473)
......++..|+|||.+.+..++.++|||||||++|||++ |..||..... ......+...... .....
T Consensus 157 ----~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~~----~~~~~ 225 (256)
T cd05112 157 ----SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---SEVVETINAGFRL----YKPRL 225 (256)
T ss_pred ----ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHhCCCCC----CCCCC
Confidence 1122345678999999998889999999999999999998 9999976332 2223332221110 01233
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 243 YPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 243 ~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
.+.++.+++.+||+.+|++||++.++++.|
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 678999999999999999999999997765
No 281
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.5e-37 Score=300.09 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=185.8
Q ss_pred eeEeecCceEEEEEEEc--CCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNI--QTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~--~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.+. .++..+|+|...... ...+.+|+.+++.++|++++. +..++.+....++||||+ +
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQ-CLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEee-EEEEEcCCCCcEEEEECCCC
Confidence 46899999999999864 345678999854332 235778999999998666554 445556667789999999 7
Q ss_pred CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 86 PSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 86 ~sL~~~l~~~~----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||+++ ..+.+||+|||+++.......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~~- 155 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKEDY- 155 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccccccccCcce-
Confidence 89999986432 2467778889999999999999999999999999999995 678899999999975433221
Q ss_pred cccccccCCCcccCccccccccccCC-------CCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGI-------EQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVS 233 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~-------~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~ 233 (473)
+.......|+..|+|||++.+. .++.++|||||||++|||++ |..||......... ...+......
T Consensus 156 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~--~~~~~~~~~~ 229 (269)
T cd05087 156 ----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL--TYTVREQQLK 229 (269)
T ss_pred ----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH--HHHhhcccCC
Confidence 1112345678899999998643 35789999999999999996 99999765432211 1112221122
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
.....+...+++.+.++|..|| .+|++||++++|...|.
T Consensus 230 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2222333456789999999999 68999999999987764
No 282
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=8.3e-37 Score=303.80 Aligned_cols=258 Identities=21% Similarity=0.239 Sum_probs=195.3
Q ss_pred ceEEEeeEeecCceEEEEEEEcC--CCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeC--CeE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQ--TNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEG--DYN 77 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~--~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~--~~~ 77 (473)
+|.+.++||+|+||.||+|.+.. +++.||||++... ....+..|+.+++.++|++++..+.. .... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEV-FLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEE-EeCCCCceE
Confidence 58999999999999999999988 8999999985542 23557889999999997666655544 4444 788
Q ss_pred EEEEecCCCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEee-CCCCCcEEEEecCCc
Q 011988 78 VLVIDLLGPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL-GRRANQVYIIDFGLA 152 (473)
Q Consensus 78 ~lv~e~~g~sL~~~l~~~~----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~-~~~~~~vkL~DFGla 152 (473)
++||||++++|.+++.... ..+++..++.|+.||+.||.|||+++|+||||||+|||++. ++..+.+||+|||++
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 80 YLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999999999988876432 26899999999999999999999999999999999999953 112789999999999
Q ss_pred ccccCCCCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC------HHHHHH
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKYE 225 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~------~~~~~~ 225 (473)
+........ ........++..|+|||++.+. .++.++|||||||+||+|++|..||.+..... ....+.
T Consensus 160 ~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 160 RLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred cccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 876443221 1122445788999999988774 47999999999999999999999998654332 001111
Q ss_pred HHhhc----------------------------ccc-ccHHH-Hh--cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 226 KISEK----------------------------KVS-TSIEA-LC--RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 226 ~i~~~----------------------------~~~-~~~~~-l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.+... ... ..... +. ...+.++.+++..||..||++||++.++.+
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11000 000 00111 11 146678999999999999999999888753
No 283
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.4e-37 Score=298.40 Aligned_cols=238 Identities=18% Similarity=0.208 Sum_probs=183.7
Q ss_pred eeEeecCceEEEEEEEcCCC----------cEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 13 RKIGSGSFGEIYLGTNIQTN----------EEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~----------~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
+.||+|+||.||+|.+..++ ..|++|+..... ...+.+|+.+++.++|++++..+..+ .. ...+++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVC-VR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEE-ec-CCcEEE
Confidence 47899999999999988766 357888744333 45678899999999866665555444 44 667999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCC----CCCcEEEEecCCcccc
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR----RANQVYIIDFGLAKRY 155 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~----~~~~vkL~DFGla~~~ 155 (473)
|||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.+. ....+||+|||++...
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~ 158 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence 9999 7899999886555799999999999999999999999999999999999996322 1127999999999865
Q ss_pred cCCCCccccccccCCCcccCccccccccccCC--CCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccc
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKV 232 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~--~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 232 (473)
... ....++..|+|||++.+. .++.++|||||||++|||++ |..||...........+. ....
T Consensus 159 ~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~~~~ 224 (259)
T cd05037 159 LSR-----------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---DQHR 224 (259)
T ss_pred ccc-----------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---cCCC
Confidence 431 234567789999999877 78999999999999999999 688887754322222221 1100
Q ss_pred cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 233 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 233 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
+.......+.++|.+||..+|++||++.+|.+.|
T Consensus 225 ------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 225 ------LPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ------CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0111127899999999999999999999987765
No 284
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.2e-37 Score=295.42 Aligned_cols=247 Identities=26% Similarity=0.398 Sum_probs=197.3
Q ss_pred eEEEeeEeecCceEEEEEEEcCCC----cEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTN----EEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~----~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
+.+.+.||.|+||.||+|.+...+ ..||+|+..... ...+..|+.+++.+. ++++..+..+.......+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD-HPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCeeEEE
Confidence 467899999999999999988766 899999965443 346888999999996 55555666566666888999
Q ss_pred EecC-CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 81 IDLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~-ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
||++ +++|.+++...... +++..++.++.||+.||.|||++|++|+||||+||+++ ..+.++|+|||+++.....
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEEEcccCCceecccc
Confidence 9999 78999998754434 99999999999999999999999999999999999994 6779999999999876544
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
.... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.... ....+..+.......
T Consensus 157 ~~~~------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~---~~~~~~~~~~~~~~~--- 224 (258)
T smart00219 157 DYYK------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS---NEEVLEYLKKGYRLP--- 224 (258)
T ss_pred cccc------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHhcCCCCC---
Confidence 2211 112237789999999988889999999999999999998 889987633 233333333322221
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
....++.++.+++.+||..+|++||++.++++.|
T Consensus 225 -~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 -KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 2234789999999999999999999999987653
No 285
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.2e-37 Score=311.96 Aligned_cols=263 Identities=18% Similarity=0.254 Sum_probs=200.9
Q ss_pred CCCccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc-----CCchhHHHHHHHHHHh-cCCCCCCeeEEeeE-e
Q 011988 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK-----TKHPQLQYEAKLYKIL-QGGTGIPNLRWFGV-E 73 (473)
Q Consensus 1 m~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~-----~~~~~l~~E~~il~~L-~~~~~i~~~~~~~~-~ 73 (473)
.+..+.++|++.+.||.|+||.||+|.+..+++.||||.... .....+..|+.+++.+ +|.+++..+..+.. .
T Consensus 1 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~ 80 (337)
T cd07852 1 IDKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN 80 (337)
T ss_pred CCchhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC
Confidence 367889999999999999999999999988999999997432 2233467899999999 65555554444333 3
Q ss_pred CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
....++||||++++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 81 ~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~---~~~~~kl~d~g~~~ 155 (337)
T cd07852 81 DKDIYLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN---SDCRVKLADFGLAR 155 (337)
T ss_pred CceEEEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccchh
Confidence 446899999999999998873 3789999999999999999999999999999999999994 78899999999998
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh---
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE--- 229 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~--- 229 (473)
.+....... .......+.|+..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.........+.....
T Consensus 156 ~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07852 156 SLSELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPS 233 (337)
T ss_pred ccccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 765433211 01122345789999999988754 478999999999999999999999976433221111111100
Q ss_pred --------------------ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 230 --------------------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 230 --------------------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.........+.+.++.++.++|..||+.||++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 00111223344557899999999999999999999887754
No 286
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-36 Score=299.93 Aligned_cols=252 Identities=19% Similarity=0.248 Sum_probs=195.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeE-eCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGV-EGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~-~~~~~~lv~ 81 (473)
++|++.+.||.|++|.||+|.+..+++.||+|...... ...+.+|+++++.+.|++++..+..+.. .....+++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 57999999999999999999999999999999855432 2457899999999987666665554433 345689999
Q ss_pred ecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 82 DLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 82 e~~-g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
||+ +++|.+++.. ....+++..+..|+.||+.||.|||+.|++|+||+|+||+++ ..+.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCCeEEEeeccccccccc
Confidence 999 7899988753 234689999999999999999999999999999999999994 677899999999876543
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--CCHHHHHHHHhhcccccc
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--GTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~~~~ 235 (473)
... ....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ....+....+........
T Consensus 158 ~~~---------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd06621 158 SLA---------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPEL 228 (287)
T ss_pred ccc---------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhh
Confidence 221 234678899999999998999999999999999999999999976532 122222222222111100
Q ss_pred HHHHh--cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 236 IEALC--RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 236 ~~~l~--~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..... ..+++++.++|.+||..+|.+||++.+|.+
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 229 KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00000 134678999999999999999999877743
No 287
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.5e-37 Score=303.83 Aligned_cols=255 Identities=20% Similarity=0.209 Sum_probs=195.5
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC--CeE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG--DYN 77 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~--~~~ 77 (473)
..++|++.+.||.|+||.||+|.+..+++.|+||.+.... ...+..|+.+++.+.|.++ ..+..+.... ...
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~~ 81 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNI-VTVKEVVVGSNLDKI 81 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCE-EEEEEEEEecCCCcE
Confidence 3468999999999999999999999899999999854322 2245689999999995554 4444444444 789
Q ss_pred EEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 78 VLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 78 ~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+++|||++++|.+++......+++..++.++.||+.||+|||++||+|+||||+|||++ ..+.++|+|||++..+..
T Consensus 82 ~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 82 YMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NRGILKICDFGLAREYGS 158 (293)
T ss_pred EEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCcEEEeecCceeeccC
Confidence 99999998899999986666799999999999999999999999999999999999994 678999999999987654
Q ss_pred CCCccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc----
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV---- 232 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~---- 232 (473)
... ......++..|+|||.+.+.. ++.++|||||||++|+|++|..||..........++........
T Consensus 159 ~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (293)
T cd07843 159 PLK-------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIW 231 (293)
T ss_pred Ccc-------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHH
Confidence 321 112346788999999987654 68999999999999999999999976543222221111100000
Q ss_pred ------------------cccHHHHhcC--CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 233 ------------------STSIEALCRG--YPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 233 ------------------~~~~~~l~~~--~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
...+...... +++.+.++|..||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 232 PGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000011111 4788999999999999999999888753
No 288
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.4e-37 Score=301.35 Aligned_cols=246 Identities=19% Similarity=0.316 Sum_probs=197.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|++.+.||.|+||.||+|.+..+++.||+|.+.... ...+.+|+++++.+.|++ +..+..++......++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPY-IVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCc-hhhhheeeecCCEEEEEEE
Confidence 47899999999999999999999999999999854432 245788999999998554 5455555566688999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++......+++..+..++.||+.||.|||+ .||+|+||||+||+++ ..+.++|+|||++..+.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeecccchhhHHHHh
Confidence 99 589999998655789999999999999999999999 9999999999999995 678899999999876643221
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--CCHHHHHHHHhhccccccHHH
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--GTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~~~~~~~ 238 (473)
....++..|+|||.+.+..++.++|||||||++|+|++|..||..... .........+.......
T Consensus 157 ---------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (265)
T cd06605 157 ---------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPR---- 223 (265)
T ss_pred ---------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCC----
Confidence 125788999999999998999999999999999999999999976421 11222222222221111
Q ss_pred HhcC-CcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 239 LCRG-YPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 239 l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
+... ++.++.++|..||..||++||++.+|+
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 255 (265)
T cd06605 224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELL 255 (265)
T ss_pred CChhhcCHHHHHHHHHHcCCCchhCcCHHHHh
Confidence 1122 788999999999999999999988774
No 289
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.4e-37 Score=301.10 Aligned_cols=233 Identities=23% Similarity=0.305 Sum_probs=180.8
Q ss_pred eEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhc--CCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~--~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
.||+|+||.||++.+..+++.||||+..+.. ......|..+++.+. +++++..+..+....+..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999854322 112344555555443 4556666666667778889999998
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
+++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++ .++.++|+|||++........
T Consensus 81 ~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~---~~~~~~l~dfg~~~~~~~~~~---- 152 (279)
T cd05633 81 GGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKP---- 152 (279)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC---CCCCEEEccCCcceeccccCc----
Confidence 7899988874 45699999999999999999999999999999999999994 778999999999975543221
Q ss_pred ccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 165 PYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
....|+..|+|||.+.+ ..++.++|||||||++|||++|..||.......... ...... .....+...+
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~----~~~~~~~~~~ 222 (279)
T cd05633 153 -----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTL----TVNVELPDSF 222 (279)
T ss_pred -----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHhh----cCCcCCcccc
Confidence 23468999999999874 568999999999999999999999998654433222 221111 0111234567
Q ss_pred cHHHHHHHHHHhcCCCCCCCC
Q 011988 244 PTEFASYFHYCRSLRFDDKPD 264 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt 264 (473)
+.++.++|..||..||.+||+
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcC
Confidence 899999999999999999994
No 290
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-39 Score=302.77 Aligned_cols=264 Identities=20% Similarity=0.276 Sum_probs=213.3
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
.-++|..++.||+|.||.|.+|+.+.+++.+|||++.+.. ...-..|-++|+... |+.+..+.+.+...+..|
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEE
Confidence 4578999999999999999999999999999999855432 233456888888877 455556666778888999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+||||. ||.|.-.+.. .+.|++.....+...|+.||.|||+++||.||||.+|.|+ +++|++||+|||+|+.-..
T Consensus 245 FVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhccc
Confidence 999999 8888777763 4579999999999999999999999999999999999999 6899999999999986543
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
... ..++++||+.|+|||++....|++.+|.|.+||++|||++|++||...... ..++-|....+
T Consensus 321 ~g~-------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~---kLFeLIl~ed~----- 385 (516)
T KOG0690|consen 321 YGD-------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE---KLFELILMEDL----- 385 (516)
T ss_pred ccc-------eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh---HHHHHHHhhhc-----
Confidence 322 236899999999999999999999999999999999999999999874432 22222222211
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCC--HHHHHHHHHHHHHHhCCCCCCcccccccccc
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPD--YAYLKRLFRDLFIREGFQFDYVFDWTILKYQ 295 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt--~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 295 (473)
.++..++++.+.|+..+|.+||.+|.. .++.+++.++-|- ...+|+..-.+
T Consensus 386 kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF-------~~v~W~~~~~K 438 (516)
T KOG0690|consen 386 KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFF-------ASVDWEATYRK 438 (516)
T ss_pred cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhh-------ccCCHHHHHHh
Confidence 234678899999999999999999963 4566666666553 45788876444
No 291
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.9e-37 Score=298.88 Aligned_cols=248 Identities=18% Similarity=0.259 Sum_probs=184.4
Q ss_pred eeEeecCceEEEEEEEcC--CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQ--TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~--~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|.... ....+++|...... ...+.+|+.+++.++|++++.. ...+......+++|||+ +
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~-~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC-LGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceE-EEEECCCCceEEEEEeCCC
Confidence 468999999999997533 34578888754332 2346789999999986665554 44556677889999999 7
Q ss_pred CCHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 86 PSLEDLFNFCSR----KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 86 ~sL~~~l~~~~~----~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
++|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~~~~~~~- 155 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGDYGLALEQYPEDY- 155 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEeccccccccccchh-
Confidence 899999875432 256788899999999999999999999999999999994 678999999999875432211
Q ss_pred cccccccCCCcccCccccccccccC-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHH-Hhhccc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLG-------IEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEK-ISEKKV 232 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~-------~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~-i~~~~~ 232 (473)
+.......++..|+|||++.. ..++.++|||||||++|||++ |..||..... .+.+.. +.....
T Consensus 156 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~~~~~~~~~ 228 (269)
T cd05042 156 ----YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD---EQVLKQVVREQDI 228 (269)
T ss_pred ----eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHHhhccCc
Confidence 011123356778999998743 356889999999999999999 8899976532 222222 222222
Q ss_pred cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 233 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 233 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
......+...++..+.+++..|| .||++||++++|.++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 22223344568899999999999 59999999999988763
No 292
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.8e-37 Score=298.09 Aligned_cols=251 Identities=20% Similarity=0.310 Sum_probs=196.0
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
+|++.+.||.|+||.||+|.+ .+++.||||...... ...+.+|+.+++.++|.+ +..+..++......+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVN-IVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCC-EeeEeeEeecCCeEE
Confidence 588999999999999999986 578899999743221 134778999999998654 445555666778999
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
++|||+ +++|.+++.. ...+++..+..++.||+.||+|||+.||+|+||||+||++ +..+.++|+|||++.....
T Consensus 79 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 79 IFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhhhh
Confidence 999999 8899999874 3468999999999999999999999999999999999999 4778999999999986532
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
....... ........|+..|+|||++.+..++.++|||||||++|+|++|..||...... .....+... .....
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~--~~~~~ 228 (265)
T cd06631 155 VGLHGTH-SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL---AAMFYIGAH--RGLMP 228 (265)
T ss_pred ccccccc-cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH---HHHHHhhhc--cCCCC
Confidence 2111100 01123457899999999999988999999999999999999999999764322 111111111 11122
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.+...++.++.++|..||..+|++||++.++++
T Consensus 229 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 229 RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 344568899999999999999999999887753
No 293
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=4.7e-37 Score=300.05 Aligned_cols=245 Identities=20% Similarity=0.325 Sum_probs=195.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhc--CCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~--~~~~i~~~~~~~~~~~~~~lv 80 (473)
+.|++.+.||.|+||.||+|.+..+++.||||++... ....+..|+.+++.+. .++++..+..++..+...+++
T Consensus 1 ~~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 1 SLYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred ChhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 3588999999999999999999999999999985432 2345788999999997 245555555566777889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+|+||+|+||+++ ..+.++|+|||++..+....
T Consensus 81 ~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 81 MEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred EecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCceeecCCCc
Confidence 9999 8899999863 4799999999999999999999999999999999999995 67899999999998765433
Q ss_pred CccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.. .....|+..|+|||.+.+. .++.++|||||||++|+|++|..||.+.... .....+.... . ..
T Consensus 156 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~---~~~~~~~~~~-~---~~ 221 (277)
T cd06917 156 SK-------RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF---RAMMLIPKSK-P---PR 221 (277)
T ss_pred cc-------cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh---hhhhccccCC-C---CC
Confidence 11 1334789999999998754 4789999999999999999999999764321 1111111111 1 11
Q ss_pred Hhc-CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 239 LCR-GYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 239 l~~-~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
+.. .++.++.+++..||..||++||++.++..
T Consensus 222 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 222 LEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 222 37889999999999999999999888843
No 294
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.2e-36 Score=294.14 Aligned_cols=248 Identities=23% Similarity=0.322 Sum_probs=203.5
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
++|++.+.||.|++|.||+|.+..+++.|+||+..... ...+..|+.++..++| +++..+..+.......+++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES-PYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCeeeEEEEEccCCeEEEEEE
Confidence 47999999999999999999999999999999854443 3568899999999984 455566666677788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ..+++..++.++.||+.||.|||+ +|++|+||+|+||+++ .++.++|+|||++........
T Consensus 80 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 80 YMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred ecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCCEEEccCccceecccCCC
Confidence 99 68999999754 679999999999999999999999 9999999999999994 788999999999987654322
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
. .....++..|+|||.+.+..++.++||||||+++|+|++|..||.........+....+..... ..+.
T Consensus 156 ~-------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~ 224 (264)
T cd06623 156 Q-------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP----PSLP 224 (264)
T ss_pred c-------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC----CCCC
Confidence 1 1244688999999999998899999999999999999999999987653333444444332221 1223
Q ss_pred cC-CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RG-YPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.. ++..+.++|..||..+|++||++.+|.+
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 34 7899999999999999999999887754
No 295
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.2e-37 Score=306.06 Aligned_cols=251 Identities=20% Similarity=0.332 Sum_probs=198.7
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
-.++|++.+.||.|+||.||+|.+..+++.||||.+.+.. ...+..|+.++..+..|+++..+..++......+++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 3578999999999999999999998889999999965432 233566777777776677777777777888889999
Q ss_pred EecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||++++|.+++......+++..+..++.||+.||.|||+ .||+||||+|+||+++ .++.+||+|||++..+....
T Consensus 93 ~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~---~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 93 MELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD---ASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc---CCCCEEECccccchhccCCC
Confidence 9999999999988666789999999999999999999997 6999999999999994 67899999999997664432
Q ss_pred CccccccccCCCcccCccccccccccCCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIE----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
.. ....++..|+|||.+.+.. ++.++|||||||++|+|++|+.||..... ..+.+..+.......
T Consensus 170 ~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~- 238 (296)
T cd06618 170 AK--------TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT--EFEVLTKILQEEPPS- 238 (296)
T ss_pred cc--------cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh--HHHHHHHHhcCCCCC-
Confidence 21 2235788999999998654 78999999999999999999999965322 122232222221111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.. ....++.++.+++.+||..||++||+++++++
T Consensus 239 ~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 239 LP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred CC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 10 11246889999999999999999999888753
No 296
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.7e-37 Score=297.14 Aligned_cols=245 Identities=20% Similarity=0.230 Sum_probs=199.0
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|++.++||.|+||.||++.+..+++.||||.+... ....+..|+.+++.++|.+ +..+..+.......+++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPN-IVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCC-eeeeEeeecCCCeEEEEEe
Confidence 699999999999999999999999999999984322 2346888999999998655 5556666677788999999
Q ss_pred cC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||+|+|||++ .++.++|+|||++..+.....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEEeeccceeecCcchh
Confidence 99 78999998753 33589999999999999999999999999999999999994 678899999999986644321
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
. .....|+..|+|||++.+..++.++|||||||++|+|++|+.||... .....+..+...... ...
T Consensus 157 ~-------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~---~~~~~~~~~~~~~~~----~~~ 222 (256)
T cd08218 157 L-------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG---NMKNLVLKIIRGSYP----PVS 222 (256)
T ss_pred h-------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC---CHHHHHHHHhcCCCC----CCc
Confidence 1 12346888999999999988999999999999999999999999753 233333333332221 123
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..++.++.++|.+||+.+|++||++.+|++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 467899999999999999999999888854
No 297
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1e-36 Score=306.36 Aligned_cols=250 Identities=22% Similarity=0.257 Sum_probs=197.9
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
.+.++|.+.+.||.|+||.||+|.+..+++.||||...+. ....+..|+.+++.+.|++++..+..+.......+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 3678999999999999999999999999999999974321 23457789999999997776666655555567789
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 79 lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
++|||++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||++ ..+.++|+|||++......
T Consensus 87 lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~---~~~~~~l~dfg~~~~~~~~ 161 (328)
T cd07856 87 FVTELLGTDLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLARIQDPQ 161 (328)
T ss_pred EEeehhccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC---CCCCEEeCccccccccCCC
Confidence 999999999999886 34688999999999999999999999999999999999994 6789999999999754321
Q ss_pred CCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh---------
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS--------- 228 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~--------- 228 (473)
.....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...........+.+..
T Consensus 162 ----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 162 ----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred ----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 123467889999998876 568999999999999999999999997643211111111100
Q ss_pred --------------hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 229 --------------EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 229 --------------~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
..............++.++.++|.+||+.+|++||+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~el 285 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEA 285 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 0011122333445678999999999999999999998876
No 298
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.2e-37 Score=299.32 Aligned_cols=242 Identities=19% Similarity=0.251 Sum_probs=190.6
Q ss_pred CCceEEEeeE--eecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 6 GNKFRLGRKI--GSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 6 ~~~y~i~~~L--G~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
.++|.+.+.+ |+|+||.||++.+..+++.+|+|+......... |+.+...+.+++++..+..++...+..++||||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~ 90 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDY 90 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEc
Confidence 3567787777 999999999999999999999999655433322 344444455577777777777778899999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCC-cEEEEecCCcccccCCCCc
Q 011988 84 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~-~vkL~DFGla~~~~~~~~~ 161 (473)
+ +++|.+++... ..+++.+++.++.||+.||.|||+.||+||||||+||++. ..+ .++|+|||++......
T Consensus 91 ~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~~l~dfg~~~~~~~~--- 163 (267)
T PHA03390 91 IKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD---RAKDRIYLCDYGLCKIIGTP--- 163 (267)
T ss_pred CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe---CCCCeEEEecCccceecCCC---
Confidence 9 88999999754 3799999999999999999999999999999999999995 445 8999999998765432
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCH-HHHHHHHhhccccccHHHHh
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~l~ 240 (473)
....|+..|+|||++.+..++.++|||||||++|||++|..||........ ...+..... . .....
T Consensus 164 --------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~-~~~~~ 230 (267)
T PHA03390 164 --------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ----K-KLPFI 230 (267)
T ss_pred --------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc----c-cCCcc
Confidence 234688999999999998999999999999999999999999985432211 111111111 1 11223
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCC-HHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPD-YAYLK 269 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt-~~~l~ 269 (473)
+.+++.+.++|..||+.+|.+||+ +++++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 231 KNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred cccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 468899999999999999999995 57664
No 299
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=8e-38 Score=302.91 Aligned_cols=239 Identities=19% Similarity=0.222 Sum_probs=182.1
Q ss_pred eeEeecCceEEEEEEEcCCCc-------EEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 13 RKIGSGSFGEIYLGTNIQTNE-------EVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~-------~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+.||.|+||.||+|.+...+. .|++|+..... ...+..|+.+++.+.|++.+ .+..+...+...++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv-~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV-LNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChh-heeeEEEeCCCcEEEEe
Confidence 468999999999999865543 48888754432 23567888999999866555 45445556677899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC-----CCcEEEEecCCccccc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-----ANQVYIIDFGLAKRYR 156 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-----~~~vkL~DFGla~~~~ 156 (473)
|+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++.++. ...++|+|||++....
T Consensus 80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 99 77999999866667899999999999999999999999999999999999963221 1247999999986543
Q ss_pred CCCCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCC-CCCCCCCCCCHHHHHHHHhhccccc
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGS-LPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~-~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
.. ....++..|+|||++.+. .++.++|||||||++|||++|. .||....... .. .+....
T Consensus 160 ~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~---~~-~~~~~~--- 221 (258)
T cd05078 160 PK-----------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK---KL-QFYEDR--- 221 (258)
T ss_pred Cc-----------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH---HH-HHHHcc---
Confidence 21 235688899999999874 4799999999999999999984 6665433211 11 111111
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
..+....+.++.++|..||+.||++||++++|++.|
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 222 --HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred --ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 112234557899999999999999999999998765
No 300
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.7e-37 Score=304.85 Aligned_cols=245 Identities=22% Similarity=0.305 Sum_probs=195.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
..+.|.+.++||.|+||.||+|.+..+++.||+|++.... ...+..|+.+++.++|+ ++..+..++...+..+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~-niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHP-NTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCC-CEEEEEEEEEeCCeEE
Confidence 3467999999999999999999998899999999854321 13477899999999855 4555556667778889
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 79 lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
+||||+.++|.+++......+++..+..++.||+.||.|||+.||+|+||+|+||+++ +++.++|+|||++......
T Consensus 92 lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 92 LVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGTVKLADFGSASLVSPA 168 (307)
T ss_pred EEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CCCCEEEeecCcceecCCC
Confidence 9999999999998876667799999999999999999999999999999999999994 6789999999998754322
Q ss_pred CCccccccccCCCcccCcccccccccc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
....|+..|+|||++. ...++.++|||||||++|||++|..||.+... ......+........
T Consensus 169 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~ 234 (307)
T cd06607 169 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNDSPTL 234 (307)
T ss_pred -----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH---HHHHHHHhcCCCCCC
Confidence 2356888999999885 34588999999999999999999999976432 111122221111111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
....++.++.++|..||..+|++||++.+|+.
T Consensus 235 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 235 ---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred ---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 01246789999999999999999999888854
No 301
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=311.94 Aligned_cols=268 Identities=22% Similarity=0.270 Sum_probs=216.0
Q ss_pred CCccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCC
Q 011988 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 75 (473)
Q Consensus 2 ~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~ 75 (473)
.|.-.+.|..-++||.||||+||-++...||+.+|+|.+.+.. .....+|..||..++. +.|+.+.+.+...+
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s-~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS-PFIVSLAYAFETKD 258 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc-CcEEEEeeeecCCC
Confidence 4566788999999999999999999999999999999743322 2335789999999984 47777777778888
Q ss_pred eEEEEEecC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
..|+||.+| ||+|.-.|...+ ..|++..+..++.+|+.||++||..+||.|||||+|||+ |+.|+|.|+|+|+|.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAv 335 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAV 335 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEE
Confidence 999999999 889876665444 469999999999999999999999999999999999999 589999999999999
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 233 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 233 (473)
.+.+.... ...+||..|||||++.+..|+...|.|||||+||||+.|+-||...+...+.+.++ .. ..
T Consensus 336 ei~~g~~~--------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvd---rr-~~ 403 (591)
T KOG0986|consen 336 EIPEGKPI--------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVD---RR-TL 403 (591)
T ss_pred ecCCCCcc--------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHH---HH-Hh
Confidence 88765432 34589999999999999999999999999999999999999997755433332222 22 22
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCH-----HHHHHHHHHHHHHhCCCCCCcccccccccc
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDY-----AYLKRLFRDLFIREGFQFDYVFDWTILKYQ 295 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~-----~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~ 295 (473)
...+++...++++.++|++.+|..||.+|... +++.+ + .+...++|..+...
T Consensus 404 ~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~---H-------pfFk~lnw~rleag 460 (591)
T KOG0986|consen 404 EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKE---H-------PFFKDLNWRRLEAG 460 (591)
T ss_pred cchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhh---C-------cccccCCHhHHhcc
Confidence 33455667899999999999999999999753 23321 1 33344788876544
No 302
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.5e-37 Score=297.41 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=196.0
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCCc------hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~------~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||.|+||.||+|.+..+++.||||+..+... ..+..|..++.....++++..+..+....+..+++|||+ +
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 579999999999999999999999998654321 123445555554445666667767777788999999999 8
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++|.+++... ..+++..+..++.||+.||.|||+.||+|+||+|+|||++ ..+.++|+|||+++.....
T Consensus 82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~------- 150 (260)
T cd05611 82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLEN------- 150 (260)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccceecccc-------
Confidence 8999999743 4689999999999999999999999999999999999994 6788999999998754331
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
....|+..|+|||.+.+..++.++||||||+++|+|++|..||..... ...+..+....... .......+++
T Consensus 151 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~ 222 (260)
T cd05611 151 ----KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---DAVFDNILSRRINW-PEEVKEFCSP 222 (260)
T ss_pred ----ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcccCC-CCcccccCCH
Confidence 235688999999999988899999999999999999999999976432 23333332222111 1122346789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 246 EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
++.++|.+||..+|++||++..+.++|.+.+.+
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~ 255 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEIKSHPFFK 255 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHHHcChHhh
Confidence 999999999999999999988888888877653
No 303
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.5e-37 Score=300.53 Aligned_cols=248 Identities=20% Similarity=0.310 Sum_probs=190.7
Q ss_pred eeEeecCceEEEEEEEcCCC------cEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 13 RKIGSGSFGEIYLGTNIQTN------EEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~------~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+.||.|+||.||+|++.... +.||||.+... ....+.+|+.+++.++|++++. +..++......+++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVK-LLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeee-EeeeecCCCCeEEEEe
Confidence 46899999999999976544 68999975433 2446788999999998665555 4445566777899999
Q ss_pred cC-CCCHHHHHHHc------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCC--CCCcEEEEecCCcc
Q 011988 83 LL-GPSLEDLFNFC------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGLAK 153 (473)
Q Consensus 83 ~~-g~sL~~~l~~~------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~--~~~~vkL~DFGla~ 153 (473)
|+ +++|.+++... ...+++..++.++.||+.||.|||+++|+|+||||+|||++.++ ....++|+|||+++
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 98 78999998642 23478899999999999999999999999999999999996322 12389999999997
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccc
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKV 232 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 232 (473)
........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+.....
T Consensus 160 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---~~~~~~~~~~~~ 231 (269)
T cd05044 160 DIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---QEVLQHVTAGGR 231 (269)
T ss_pred cccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---HHHHHHHhcCCc
Confidence 65433211 11123356788999999999899999999999999999998 9999976432 222222222111
Q ss_pred cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 233 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 233 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
......+|..+.++|.+||..+|++||++++|.+.|+
T Consensus 232 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 232 ----LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ----cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1123457899999999999999999999999988875
No 304
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1e-36 Score=296.94 Aligned_cols=250 Identities=24% Similarity=0.395 Sum_probs=196.2
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----C--------chhHHHHHHHHHHhcCCCCCCeeEEeeEeC
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----K--------HPQLQYEAKLYKILQGGTGIPNLRWFGVEG 74 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~--------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~ 74 (473)
+|.+.+.||.|+||.||+|.+..+++.||||..... . ...+..|+.+++.++|.+ +..+..++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLN-IVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCC-cceEEEEeccC
Confidence 689999999999999999999889999999974321 0 124677999999998655 44555667778
Q ss_pred CeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 75 DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 75 ~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
...++||||+ +++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||+++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~---~~~~~~l~d~~~~~ 156 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD---ADGICKISDFGISK 156 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc---CCCeEEEeeccccc
Confidence 8899999999 88999998754 5799999999999999999999999999999999999994 77899999999997
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 231 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 231 (473)
........ .......|+..|+|||.+.+.. ++.++|||||||++|||++|..||..... ...+..+....
T Consensus 157 ~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~ 228 (272)
T cd06629 157 KSDDIYDN-----DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA---IAAMFKLGNKR 228 (272)
T ss_pred cccccccc-----cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch---HHHHHHhhccc
Confidence 65432111 1123456889999999988755 78999999999999999999999965322 22222222111
Q ss_pred -ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 232 -VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 232 -~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
...........++.++.++|..||..+|++||++++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 229 SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 111122234567899999999999999999999888753
No 305
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.8e-37 Score=298.58 Aligned_cols=239 Identities=17% Similarity=0.187 Sum_probs=180.2
Q ss_pred eeEeecCceEEEEEEEcC------------CCcEEEEEEcccCCc---hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 13 RKIGSGSFGEIYLGTNIQ------------TNEEVAIKLNVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~------------~~~~vAiK~~~~~~~---~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
+.||+|+||.||+|+... ....|++|+...... ..+..|+.++..++|++ |..+..++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~-iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKH-IVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCC-EeeEEEEEecCCCC
Confidence 468999999999998532 223588898544322 34677888999998654 55555566677778
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC----CCcEEEEecCCc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR----ANQVYIIDFGLA 152 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~----~~~vkL~DFGla 152 (473)
+++|||+ +++|..++......+++..++.|+.||+.||+|||++||+||||||+|||++.+.. ...++|+|||++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999 67888887755667999999999999999999999999999999999999963211 123899999998
Q ss_pred ccccCCCCccccccccCCCcccCcccccccccc-CCCCCchhhHHHHHHHHHHHH-cCCCCCCCCCCCCHHHHHHHHhhc
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHL-GIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTKKQKYEKISEK 230 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~-~~~~s~ksDVwSlGviL~ell-tG~~Pf~~~~~~~~~~~~~~i~~~ 230 (473)
...... ....++..|+|||.+. +..++.++|||||||+||||+ .|..||........ ......
T Consensus 160 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~----~~~~~~ 224 (262)
T cd05077 160 ITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK----ERFYEG 224 (262)
T ss_pred ccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH----HHHHhc
Confidence 754321 2346788999999887 456899999999999999998 58999876432211 111111
Q ss_pred cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 231 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 231 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
.. .+....++++.++|.+||+.||++||++.+|++.|
T Consensus 225 ~~-----~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 QC-----MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred Cc-----cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11 11223457899999999999999999999987655
No 306
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9.6e-37 Score=297.56 Aligned_cols=251 Identities=19% Similarity=0.325 Sum_probs=198.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcC-----CCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQ-----TNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~-----~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
++|++.+.||.|+||.||+|++.. ..+.|++|....... ..+..|+++++.++|.+ +..+..++......
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKN-VVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcc-eeeeEEEECCCCcc
Confidence 679999999999999999999754 346799998544332 35788999999998655 44555566677788
Q ss_pred EEEEecC-CCCHHHHHHHcC--------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEe
Q 011988 78 VLVIDLL-GPSLEDLFNFCS--------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~--------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 148 (473)
+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ ..+.++|+|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCCcEEEcc
Confidence 9999999 689999987433 1589999999999999999999999999999999999995 678899999
Q ss_pred cCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHH
Q 011988 149 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 149 FGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i 227 (473)
||+++....... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||..... ...+..+
T Consensus 161 ~~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---~~~~~~~ 231 (275)
T cd05046 161 LSLSKDVYNSEY------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---EEVLNRL 231 (275)
T ss_pred cccccccCcccc------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---HHHHHHH
Confidence 999875432211 11233466788999999998889999999999999999998 8899976432 2223333
Q ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 228 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
........ ....+|..+.+++.+||..+|++||++.+++..|.
T Consensus 232 ~~~~~~~~---~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 QAGKLELP---VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HcCCcCCC---CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 22222111 12467899999999999999999999999987764
No 307
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=7.6e-37 Score=307.65 Aligned_cols=261 Identities=21% Similarity=0.264 Sum_probs=199.7
Q ss_pred CCCccCCceEE-EeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc-----------------hhHHHHHHHHHHhcCCC
Q 011988 1 MEPRVGNKFRL-GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH-----------------PQLQYEAKLYKILQGGT 62 (473)
Q Consensus 1 m~~~i~~~y~i-~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~-----------------~~l~~E~~il~~L~~~~ 62 (473)
|..-+.++|.. .+.||.|+||.||+|.+..+++.||||+...... ..+..|+.+++.++|.+
T Consensus 2 ~~~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 81 (335)
T PTZ00024 2 MSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHEN 81 (335)
T ss_pred CccccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcc
Confidence 67788899975 5779999999999999999999999998543221 13678999999998655
Q ss_pred CCCeeEEeeEeCCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCC
Q 011988 63 GIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 142 (473)
Q Consensus 63 ~i~~~~~~~~~~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~ 142 (473)
++ .+..++...++.+++|||+.++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+|||++ ..+
T Consensus 82 iv-~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~~~ 156 (335)
T PTZ00024 82 IM-GLVDVYVEGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---SKG 156 (335)
T ss_pred ee-eeeEEEecCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---CCC
Confidence 54 45555667788999999999999999873 45699999999999999999999999999999999999994 778
Q ss_pred cEEEEecCCcccccCCCCccc-------cccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCC
Q 011988 143 QVYIIDFGLAKRYRDTATHQH-------IPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQG 214 (473)
Q Consensus 143 ~vkL~DFGla~~~~~~~~~~~-------~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~ 214 (473)
.++|+|||++..+........ ..........++..|+|||.+.+.. ++.++|||||||++|||++|..||.+
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 236 (335)
T PTZ00024 157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG 236 (335)
T ss_pred CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999987652211000 0001112335688999999998754 68999999999999999999999987
Q ss_pred CCCCCHHHHHHHHhhcc-----------------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 215 LKAGTKKQKYEKISEKK-----------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 215 ~~~~~~~~~~~~i~~~~-----------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.... ..+..+.... ...........++.++.++|..||..+|++||++++++
T Consensus 237 ~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 311 (335)
T PTZ00024 237 ENEI---DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEAL 311 (335)
T ss_pred CCHH---HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHh
Confidence 5432 2222221100 01112223345688999999999999999999987774
No 308
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.1e-37 Score=304.95 Aligned_cols=245 Identities=23% Similarity=0.315 Sum_probs=196.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.+.|++.+.||.|+||.||+|.+..+++.||||+..... ...+..|+.+++.+.|.+++ .+..++......++||
T Consensus 3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT-RYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccH-hhhcccccCCceEEEE
Confidence 345778899999999999999998899999999854332 23478899999999855544 4555556777889999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|.+++. ...+++..+..++.||+.||.|||++||+|+||+|+||+++ .++.++|+|||++..+.....
T Consensus 82 e~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 82 EYLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EccCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEccccccccccCcch
Confidence 999 779998886 45689999999999999999999999999999999999995 678899999999986654321
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
. .....|+..|+|||++.+..++.++|||||||++|||++|..||......... ..+.... ...+.
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~~~~----~~~~~ 222 (277)
T cd06642 157 K-------RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL---FLIPKNS----PPTLE 222 (277)
T ss_pred h-------hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH---hhhhcCC----CCCCC
Confidence 1 12346889999999999988999999999999999999999999765432211 1111111 11123
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..++.++.++|..||..+|++||++.++++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 223 GQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 456889999999999999999999998865
No 309
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.1e-36 Score=298.52 Aligned_cols=251 Identities=19% Similarity=0.214 Sum_probs=193.8
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
|++.+.||.|++|.||+|.+..+|..||||++.... ...+..|+.+++.++|.+.+. +..++......+++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~-~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVR-LLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccC-HhheeccCCeEEEEEec
Confidence 678999999999999999999999999999854322 245778999999999665554 44455677889999999
Q ss_pred CCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 84 LGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 84 ~g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
++++|.+++.... ..+++..++.++.||+.||+|||+++++|+||+|+||+++ .++.++|+|||++..+.....
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 80 LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred cCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeecccccccCCCcc--
Confidence 9889999987543 3689999999999999999999999999999999999995 678999999999975533211
Q ss_pred ccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh-------------
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS------------- 228 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~------------- 228 (473)
......++..|+|||++.+. .++.++|||||||++|+|++|+.||...........+....
T Consensus 155 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 -----TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred -----ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 11223568899999988764 47899999999999999999999997643211111110000
Q ss_pred --------hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 229 --------EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 229 --------~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..............++.++.++|.+||+.||++||++.++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000011222334567889999999999999999999888753
No 310
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.7e-36 Score=304.92 Aligned_cols=254 Identities=19% Similarity=0.267 Sum_probs=193.4
Q ss_pred ceEEEeeEeecCceEEEEEEEcCC--CcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeE----eCCe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQT--NEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGV----EGDY 76 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~--~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~----~~~~ 76 (473)
+|++.+.||.|+||.||++.+..+ +..||||.+... ....+..|+.+++.+.+|++|..+..+.. ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 589999999999999999999877 889999985432 13456789999999975666665544322 2345
Q ss_pred EEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 77 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
.+++|++++++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++.+.
T Consensus 81 ~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---ADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CCCCEEeCcCCCceecc
Confidence 789999999999999863 45799999999999999999999999999999999999994 67899999999998765
Q ss_pred CCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHH-----------
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY----------- 224 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----------- 224 (473)
...... ........||..|+|||.+.+ ..++.++|||||||++|+|++|..||...........+
T Consensus 157 ~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 157 ENPGEN---AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred cccccc---cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 432211 111234578999999998876 46899999999999999999999999764321111110
Q ss_pred -HHHhh-----------ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 225 -EKISE-----------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 225 -~~i~~-----------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
..+.. .........+...++.++.+++.+||+.||.+||++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~l 289 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEA 289 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 00000 000112233344567899999999999999999998876
No 311
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.2e-36 Score=295.88 Aligned_cols=247 Identities=21% Similarity=0.275 Sum_probs=191.4
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
+.....||+|+||.||+|.+..++..|++|...... ...+.+|+.+++.++|.+++ .+..++..++..++++||+
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~ 88 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIV-QYLGSDSENGFFKIFMEQVP 88 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCee-eeeeeeccCCEEEEEEecCC
Confidence 444568999999999999998899999999854433 23578999999999866555 4555666778899999998
Q ss_pred CCCHHHHHHHcCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 85 GPSLEDLFNFCSRKL--SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 85 g~sL~~~l~~~~~~l--s~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
+++|.+++......+ ++..+..++.||+.||.|||++||+||||||+||+++ ...+.++|+|||++..+.....
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg~~~~~~~~~~-- 164 (268)
T cd06624 89 GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFGTSKRLAGINP-- 164 (268)
T ss_pred CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecchhheecccCCC--
Confidence 789999987544455 8889999999999999999999999999999999995 3367899999999976543221
Q ss_pred ccccccCCCcccCccccccccccCCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
......|+..|+|||.+.+.. ++.++|||||||++|+|++|..||........ ....... ......+.
T Consensus 165 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~~---~~~~~~~~ 234 (268)
T cd06624 165 -----CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVGM---FKIHPEIP 234 (268)
T ss_pred -----ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhhh---hccCCCCC
Confidence 112346889999999987654 78999999999999999999999976432111 1111110 01111233
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..+++++.+++.+||..+|++||++.+|.+
T Consensus 235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 467889999999999999999999888753
No 312
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.9e-36 Score=296.71 Aligned_cols=247 Identities=22% Similarity=0.270 Sum_probs=192.3
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhc--CCCCCCeeEEeeEeCCe-----
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDY----- 76 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~--~~~~i~~~~~~~~~~~~----- 76 (473)
|++.+.||.|+||.||+|++..+++.||||+..... ...+..|+.+++.+. .|+++..+..++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 789999999999999999998889999999854221 223567888888775 24555555555555554
Q ss_pred EEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 77 NVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
.+++||++.++|.+++.... ..+++..++.++.||+.||.|||+++|+|+||||+||+++ .++.+||+|||++..+
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---SDGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---cCCCEEEeccCcceec
Confidence 89999999889999887543 3699999999999999999999999999999999999995 6689999999999876
Q ss_pred cCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-----
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----- 230 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~----- 230 (473)
..... .....++..|+|||.+.+..++.++|||||||++|||++|..||.+..... .+.++...
T Consensus 158 ~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 226 (287)
T cd07838 158 SFEMA--------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD---QLDKIFDVIGLPS 226 (287)
T ss_pred cCCcc--------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH---HHHHHHHHcCCCC
Confidence 44321 123357889999999999899999999999999999999999998754322 22222110
Q ss_pred -----------------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 -----------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 -----------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
............+++++.++|..||+.||++||++.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 227 EEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred hHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 011111222334568889999999999999999988775
No 313
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.3e-37 Score=299.86 Aligned_cols=238 Identities=17% Similarity=0.224 Sum_probs=181.0
Q ss_pred eEeecCceEEEEEEEcCC------------------------CcEEEEEEcccCCc---hhHHHHHHHHHHhcCCCCCCe
Q 011988 14 KIGSGSFGEIYLGTNIQT------------------------NEEVAIKLNVKTKH---PQLQYEAKLYKILQGGTGIPN 66 (473)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~------------------------~~~vAiK~~~~~~~---~~l~~E~~il~~L~~~~~i~~ 66 (473)
+||+|+||.||+|....+ ...|++|++..... ..+..|+.+++.++| ++|..
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h-~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSH-IHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCC-CCeee
Confidence 699999999999975321 13588888544322 346678888888885 55556
Q ss_pred eEEeeEeCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeC----CCC
Q 011988 67 LRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG----RRA 141 (473)
Q Consensus 67 ~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~----~~~ 141 (473)
+..++......++||||+ +++|..++......+++..++.|+.||+.||+|||++||+||||||+|||++.. ...
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~ 160 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS 160 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence 666777888889999999 788988887656679999999999999999999999999999999999999632 123
Q ss_pred CcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHH-cCCCCCCCCCCCC
Q 011988 142 NQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGT 219 (473)
Q Consensus 142 ~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~ell-tG~~Pf~~~~~~~ 219 (473)
..+||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..||.......
T Consensus 161 ~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 161 PFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 35899999998644221 12357788999998876 46899999999999999985 6999997754322
Q ss_pred HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 220 KKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
....+ ..... +....++++.++|.+||+.+|++||++.+|++.|
T Consensus 230 ~~~~~----~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 KERFY----EKKHR-----LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHH----HhccC-----CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 21111 11110 1123457899999999999999999999987765
No 314
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.5e-37 Score=305.63 Aligned_cols=246 Identities=18% Similarity=0.289 Sum_probs=193.6
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
+.|.....||.|+||.||++.+..++..||||...... ...+..|+.+++.++|.+++..+. .+..++..+++|||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~-~~~~~~~~~lv~e~ 100 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYN-SYLVGDELWVVMEF 100 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHH-heecCCeEEEEEeC
Confidence 45666788999999999999998899999999854322 335778999999998665555444 45567788999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 84 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
+ +++|.+++. ...+++.+++.++.||+.||.|||++||+||||||+||+++ +++.++|+|||++........
T Consensus 101 ~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kL~dfg~~~~~~~~~~-- 173 (292)
T cd06658 101 LEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDGRIKLSDFGFCAQVSKEVP-- 173 (292)
T ss_pred CCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEccCcchhhcccccc--
Confidence 9 778988875 34689999999999999999999999999999999999994 678999999999976543221
Q ss_pred ccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 242 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 242 (473)
......|+..|+|||.+.+..++.++|||||||++|||++|..||..... ...+..+... ..... .....
T Consensus 174 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~-~~~~~-~~~~~ 243 (292)
T cd06658 174 -----KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP---LQAMRRIRDN-LPPRV-KDSHK 243 (292)
T ss_pred -----cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhc-CCCcc-ccccc
Confidence 11345789999999999988899999999999999999999999976432 2222222111 11111 11234
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 243 YPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 243 ~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
++..+.+++..||..||.+||+++++++
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 6789999999999999999999887753
No 315
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.8e-36 Score=306.39 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=195.7
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC-----
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG----- 74 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~----- 74 (473)
+.++|++.+.||.|+||.||+|.+..++..||||+..... ...+..|+.+++.++|.+++..+..+....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 6789999999999999999999999999999999854321 234778999999999777666655544332
Q ss_pred CeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 75 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 75 ~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
...++||++++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+|||++ ..+.++|+|||++..
T Consensus 93 ~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~dfg~~~~ 167 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ 167 (343)
T ss_pred ceEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccccc
Confidence 2468999999999999886 35799999999999999999999999999999999999995 678899999999976
Q ss_pred ccCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc---
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--- 230 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~--- 230 (473)
..... ....++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.........+..+...
T Consensus 168 ~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 168 TDSEM----------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred cccCc----------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 53321 23467899999999876 35889999999999999999999999764322111111111000
Q ss_pred --------------------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 --------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 --------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
........+...++.++.++|..||..||++||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 000112233356788899999999999999999988774
No 316
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.5e-36 Score=307.30 Aligned_cols=251 Identities=21% Similarity=0.295 Sum_probs=193.5
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEe-----
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 73 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~----- 73 (473)
.+.++|.+.+.||+|+||.||+|.+..+++.||||++.... ...+.+|+.+++.++|.+++..+..+...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence 35689999999999999999999999999999999864432 23467899999999977766665544322
Q ss_pred CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
....++++++++++|.+++. ...+++..++.++.||+.||+|||++||+||||||+||+++ .++.+||+|||+++
T Consensus 94 ~~~~~lv~~~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~dfg~~~ 168 (345)
T cd07877 94 FNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLAR 168 (345)
T ss_pred cccEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc---CCCCEEEecccccc
Confidence 23468999999999999886 34699999999999999999999999999999999999994 67889999999997
Q ss_pred cccCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK- 231 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~- 231 (473)
..... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.......
T Consensus 169 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (345)
T cd07877 169 HTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 238 (345)
T ss_pred ccccc----------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 54322 123578899999999877 468899999999999999999999997643221111111110000
Q ss_pred ----------------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 ----------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 ----------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
............++++.++|..||..||++||++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l 298 (345)
T cd07877 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 298 (345)
T ss_pred HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHh
Confidence 00011111224578899999999999999999977663
No 317
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=7.4e-37 Score=302.44 Aligned_cols=258 Identities=21% Similarity=0.233 Sum_probs=197.8
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEe-----
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 73 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~----- 73 (473)
+..++|++.+.||.|+||.||+|.+..+++.||||++.... ...+..|+.+++.++|++++..+..+...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34678999999999999999999999999999999854321 23467899999999876666554443322
Q ss_pred ----CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEec
Q 011988 74 ----GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 149 (473)
Q Consensus 74 ----~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 149 (473)
....++++||++++|.+++......+++..++.++.||+.||.|||+.||+|+||||+||+++ +.+.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN---NKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCcEEeCcc
Confidence 237899999998899888875555799999999999999999999999999999999999994 7789999999
Q ss_pred CCcccccCCCCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh
Q 011988 150 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 228 (473)
Q Consensus 150 Gla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~ 228 (473)
|++..+...... ......++..|+|||.+.+. .++.++|||||||++|||++|+.||...........+....
T Consensus 161 g~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~ 234 (302)
T cd07864 161 GLARLYNSEESR------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLC 234 (302)
T ss_pred cccccccCCccc------ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 999876543221 11223567889999988754 47899999999999999999999997643322222222221
Q ss_pred hcccc----------------------ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 229 EKKVS----------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 229 ~~~~~----------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..... .........+|..+.+++..||..||++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11100 0111223457899999999999999999999888753
No 318
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.1e-36 Score=298.00 Aligned_cols=244 Identities=22% Similarity=0.332 Sum_probs=196.4
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+-|++.++||.|+||.||+|.+..+++.||||+..... ...+..|+.++..+.|++ +..+..+...+...++|||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY-VTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCC-EeEEEEEEEeCCeEEEEEE
Confidence 34888999999999999999998899999999854322 245778999999998655 4455556677788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++. ...+++..+..++.|++.||.|||++||+|+||||+||+++ .++.++|+|||++..+.....
T Consensus 83 ~~~~~~l~~~i~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06641 83 YLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred eCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEEeecccceecccchh-
Confidence 99 679998886 44689999999999999999999999999999999999994 678899999999876543221
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+.... ...+..
T Consensus 157 ------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~----~~~~~~ 223 (277)
T cd06641 157 ------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP---MKVLFLIPKNN----PPTLEG 223 (277)
T ss_pred ------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch---HHHHHHHhcCC----CCCCCc
Confidence 11234688899999999988899999999999999999999999976432 22222222111 112334
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.++.++.+++..||..+|++||++.++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 57899999999999999999999998866
No 319
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.1e-36 Score=295.73 Aligned_cols=248 Identities=24% Similarity=0.346 Sum_probs=194.6
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--------CchhHHHHHHHHHHhcCCCCCCeeEEeeEe-CCeE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--------KHPQLQYEAKLYKILQGGTGIPNLRWFGVE-GDYN 77 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~-~~~~ 77 (473)
.+|.+.+.||+|+||.||+|.+..+++.||+|+.... ....+.+|+.+++.++|.+++..+..+... ....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 5799999999999999999999999999999984321 123577899999999876666555444332 4567
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+++|||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECccccccccc
Confidence 8999998 7899999874 34589999999999999999999999999999999999994 67889999999998654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
...... .......|+..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+.. ....
T Consensus 158 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~---~~~~ 227 (264)
T cd06653 158 TICMSG----TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA---MAAIFKIAT---QPTK 227 (264)
T ss_pred cccccC----ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH---HHHHHHHHc---CCCC
Confidence 321100 111245689999999999998899999999999999999999999976432 222222221 1112
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
..++..+++++.++|.+||. ++..||++.++.
T Consensus 228 ~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~ 259 (264)
T cd06653 228 PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLL 259 (264)
T ss_pred CCCCcccCHHHHHHHHHHhc-CcccCccHHHHh
Confidence 23456778999999999999 579999988764
No 320
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.7e-36 Score=296.68 Aligned_cols=253 Identities=20% Similarity=0.254 Sum_probs=194.8
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEe-CCeEEEEEe
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVE-GDYNVLVID 82 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~-~~~~~lv~e 82 (473)
|++.++||.|+||.||+|.+..+++.||+|.+.... ...+..|+.+++.+.|.+.+..+..+... ....+++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 789999999999999999999899999999965432 23577899999999966655555444333 278999999
Q ss_pred cCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 83 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 83 ~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
|++++|.+++......+++..++.++.||+.||+|||+.|++|+||||+|||++ +++.+||+|||++.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~~~l~d~g~~~~~~~~~~~- 156 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGVLKLADFGLARPYTKRNSA- 156 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCCEEEccccceeeccCCCcc-
Confidence 998899999875546799999999999999999999999999999999999994 7889999999999876554310
Q ss_pred ccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc-----------
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK----------- 230 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~----------- 230 (473)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||...........+......
T Consensus 157 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 157 -----DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred -----cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccccc
Confidence 11233567889999988764 4789999999999999999999999765432211111111000
Q ss_pred -----------cccccHHHHhcC-CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 231 -----------KVSTSIEALCRG-YPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 231 -----------~~~~~~~~l~~~-~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
............ ++.++.+++..||..+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000111122233 3889999999999999999999887753
No 321
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=8.2e-37 Score=294.38 Aligned_cols=246 Identities=22% Similarity=0.283 Sum_probs=196.8
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc-----CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~-----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|.+.+.||.|+||.||+|.+..++..||+|.+.. .....+..|+.+++.++|.+.+. +..+.......++++|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~-~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVT-FFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhh-hhheeccCCeEEEEEe
Confidence 58999999999999999999999999999998533 23456789999999998665554 4445667788899999
Q ss_pred cC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ +++|.+++.... ..+++..++.++.||+.||.|||+++|+|+||||+||+++ ++...+||+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS--KNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEc--CCCCeEEecccccchhccCCcc
Confidence 99 889999987533 3589999999999999999999999999999999999995 3335679999999987654322
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
. .....|+..|+|||++.+..++.++|||||||++|||++|..||..... .+.+..+..... ..+.
T Consensus 158 ~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~ 223 (257)
T cd08225 158 L-------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL---HQLVLKICQGYF----APIS 223 (257)
T ss_pred c-------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHhcccC----CCCC
Confidence 1 1234688999999999888899999999999999999999999976432 222222222221 1223
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..++.++.++|.+||..+|++||++.+|++
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 467889999999999999999999888753
No 322
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=7.1e-37 Score=299.05 Aligned_cols=251 Identities=22% Similarity=0.221 Sum_probs=197.3
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
|++.+.||.|++|.||+|.+..+++.+++|...... ...+..|+.+++.++|. ++..+..+...+...++++||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHP-NIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCC-CcchHHHhhccCCCEEEEEec
Confidence 678899999999999999998899999999854432 23577899999999854 555555555667888999999
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 84 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 84 ~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+.++|.+++......+++..++.++.||+.||.|||++||+|+||||+||+++ .++.++|+|||.+........
T Consensus 80 ~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df~~~~~~~~~~~--- 153 (283)
T cd05118 80 MDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLADFGLARSFGSPVR--- 153 (283)
T ss_pred cCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEeeeeeeEecCCCcc---
Confidence 98899999886666899999999999999999999999999999999999994 678999999999987654321
Q ss_pred cccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc------------
Q 011988 164 IPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK------------ 230 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~------------ 230 (473)
......++..|+|||.+.+. .++.++|||||||++|+|++|+.||......+...........
T Consensus 154 ----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05118 154 ----PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSL 229 (283)
T ss_pred ----cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhh
Confidence 11234678899999999877 6899999999999999999999999764322111111110000
Q ss_pred ----------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 231 ----------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 231 ----------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
........+...++.++.++|..||..||.+||++.+|+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0011122334467899999999999999999999888753
No 323
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.2e-37 Score=297.30 Aligned_cols=241 Identities=25% Similarity=0.293 Sum_probs=196.5
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+|++.+.||.|+||.||+|.+..+++.||+|+..+. ....+..|+++++.++|+++ ..+..+...+...++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFL-VNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCCh-HHHHHhhcCCCeEEEEE
Confidence 599999999999999999999989999999985432 23457889999999986554 44545556778899999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ +++|.+++... ..+++..++.|+.||+.||.|||++||+|+||||+||+++ +++.++|+|||++........
T Consensus 80 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 80 DLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred eCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCEEEeecccccccCCCcc
Confidence 999 88999998754 5799999999999999999999999999999999999994 778999999999986654321
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHh
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALC 240 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 240 (473)
.....|+..|+|||.+.+..++.++|||||||++|+|++|..||................. ......
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~ 222 (258)
T cd05578 156 --------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-----ADVLYP 222 (258)
T ss_pred --------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-----ccccCc
Confidence 1235688899999999988899999999999999999999999987654322222222111 122234
Q ss_pred cCCcHHHHHHHHHHhcCCCCCCCCHH
Q 011988 241 RGYPTEFASYFHYCRSLRFDDKPDYA 266 (473)
Q Consensus 241 ~~~p~~l~~li~~cl~~dp~~RPt~~ 266 (473)
..+|.++.++|.+||..||++||++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~~~~ 248 (258)
T cd05578 223 ATWSTEAIDAINKLLERDPQKRLGDN 248 (258)
T ss_pred ccCcHHHHHHHHHHccCChhHcCCcc
Confidence 56789999999999999999999984
No 324
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.9e-38 Score=320.20 Aligned_cols=249 Identities=20% Similarity=0.350 Sum_probs=208.0
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEE---EEE--cccC--CchhHHHHHHHHHHhcCCCCCCeeEEe-eEeCCeEEEE
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVA---IKL--NVKT--KHPQLQYEAKLYKILQGGTGIPNLRWF-GVEGDYNVLV 80 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vA---iK~--~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~-~~~~~~~~lv 80 (473)
.+...+||+|+|-+||+|.|..+|..|| ||+ +.+. ....|..|+.+|+.|+|.++|.++..+ ........+|
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence 3566789999999999999999999887 555 2222 235688999999999999998888544 4556677888
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
.|++ .|+|..|+++. +.++.+.+..|+.||+.||.|||++. |||||||.+||+|+ ...|.|||+|+|||+....
T Consensus 122 TEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred eecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhc
Confidence 9988 99999999854 46999999999999999999999875 99999999999997 7789999999999998776
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
... ....||+.|||||++. ..|+..+||||||++|+||+|+.+||..+. ...+.|.++.....+..+.
T Consensus 199 s~a---------ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~--n~AQIYKKV~SGiKP~sl~ 266 (632)
T KOG0584|consen 199 SHA---------KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT--NPAQIYKKVTSGIKPAALS 266 (632)
T ss_pred ccc---------ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC--CHHHHHHHHHcCCCHHHhh
Confidence 543 3479999999999998 579999999999999999999999999875 4577888888777665544
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
.+ -.+++++||.+||.. ..+||++.+| |.+.|-..
T Consensus 267 kV---~dPevr~fIekCl~~-~~~R~sa~eL---L~d~Ff~~ 301 (632)
T KOG0584|consen 267 KV---KDPEVREFIEKCLAT-KSERLSAKEL---LKDPFFDE 301 (632)
T ss_pred cc---CCHHHHHHHHHHhcC-chhccCHHHH---hhChhhcc
Confidence 43 368999999999999 9999997766 55555433
No 325
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.5e-37 Score=303.85 Aligned_cols=246 Identities=17% Similarity=0.277 Sum_probs=195.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
..|....+||.|+||.||+|.+..+++.||||++... ....+..|+.+++.+.|++ +..+..++..++..+++|||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~-i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQN-VVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCc-hhhhhhheeeCCeEEEEEec
Confidence 4466677899999999999999889999999985332 2345778999999998654 44455556677888999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 84 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
+ +++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+.....
T Consensus 100 ~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~kL~dfg~~~~~~~~~~-- 172 (297)
T cd06659 100 LQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDVP-- 172 (297)
T ss_pred CCCCCHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEEEeechhHhhcccccc--
Confidence 9 779988876 34689999999999999999999999999999999999994 778999999999976543221
Q ss_pred ccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcC
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRG 242 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 242 (473)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+...... .......
T Consensus 173 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~--~~~~~~~ 242 (297)
T cd06659 173 -----KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP---VQAMKRLRDSPPP--KLKNAHK 242 (297)
T ss_pred -----cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhccCCC--CccccCC
Confidence 11345789999999999998899999999999999999999999976432 2333333221111 1112345
Q ss_pred CcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 243 YPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 243 ~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
++.++.++|..||..+|++||++.+|++
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 7889999999999999999999888755
No 326
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.5e-36 Score=292.58 Aligned_cols=244 Identities=25% Similarity=0.354 Sum_probs=195.9
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
+|+..+.||+|+||.||+|.+..+++.|+||+..... ...+..|+.+++.++|.+++ .+..+.......++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV-QYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCch-heeeeEecCCeEEE
Confidence 5888999999999999999998899999999853322 24578899999999865544 45556677788899
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
+|||+ +++|.+++... ..+++..++.++.||+.||.|||+.||+|+||+|+||+++ .++.+||+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 80 FLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccceecccc
Confidence 99999 77999998743 4689999999999999999999999999999999999994 6789999999999765443
Q ss_pred CCccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
.. .....|+..|++||.+.... ++.++|||||||++|+|++|..||..... ......+.... ...
T Consensus 156 ~~--------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~---~~~~~~~~~~~---~~~ 221 (258)
T cd06632 156 SF--------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG---VAAVFKIGRSK---ELP 221 (258)
T ss_pred cc--------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH---HHHHHHHHhcc---cCC
Confidence 21 13457899999999998776 89999999999999999999999976542 22222222111 112
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.+...+++++.+++.+||..+|++||++.+++.
T Consensus 222 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 222 PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 233467899999999999999999999888753
No 327
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.4e-36 Score=305.28 Aligned_cols=247 Identities=21% Similarity=0.292 Sum_probs=192.5
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEe-----
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVE----- 73 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~----- 73 (473)
++.++|.+.+.||+|+||.||+|.+..+++.||||++.+.. ...+..|+.+++.+.|.+++..+..+...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCC
Confidence 45689999999999999999999999999999999854321 23477899999999877766655544322
Q ss_pred CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
....+++++|+..+|..++ ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 92 ~~~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~---~~~~~kL~dfg~~~ 165 (342)
T cd07879 92 FQDFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDFGLAR 165 (342)
T ss_pred CceEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCCCCc
Confidence 1346899999988887765 34689999999999999999999999999999999999994 67899999999997
Q ss_pred cccCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc--
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-- 230 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~-- 230 (473)
...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.... ..+..+...
T Consensus 166 ~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~---~~~~~~~~~~~ 232 (342)
T cd07879 166 HADAEM----------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---DQLTQILKVTG 232 (342)
T ss_pred CCCCCC----------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcC
Confidence 543211 23467889999999876 45899999999999999999999999864321 111111110
Q ss_pred ------------------------cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 ------------------------KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 ------------------------~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
........+...++.++.++|..||+.||++||++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 233 VPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred CCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 001112222345678899999999999999999988885
No 328
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.5e-36 Score=298.60 Aligned_cols=263 Identities=18% Similarity=0.281 Sum_probs=205.5
Q ss_pred ceEEEeeEeecCceEEEEEEEc---CCCcEEEEEEcccCC-------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLNVKTK-------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAiK~~~~~~-------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
+|++.+.||.|+||.||++++. .+++.||||+..+.. ...+..|+.++..+.+++++..+......+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4899999999999999999864 467889999854321 234678999999998788777777777778889
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
++||||+ +++|.+++.. ...+++..++.++.|++.||.|||+.|++||||||.||+++ .++.++|+|||+++.+.
T Consensus 81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEEECccccccc
Confidence 9999999 7799988864 35689999999999999999999999999999999999994 67889999999987654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHH-HHHHHHhhcccc
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVS 233 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~ 233 (473)
..... ......|+..|+|||.+.+.. .+.++||||||+++|||++|..||......... .....+....
T Consensus 157 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-- 228 (288)
T cd05583 157 AEEEE------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK-- 228 (288)
T ss_pred ccccc------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC--
Confidence 43211 112356899999999988765 788999999999999999999999643222111 1111111111
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCccccccc
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTIL 292 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~ 292 (473)
......++.++.+++.+||+.||++||++.++.++|++.+. ...+|...
T Consensus 229 ---~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~-------~~~~~~~~ 277 (288)
T cd05583 229 ---PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFF-------QGIDWDDL 277 (288)
T ss_pred ---CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCccc-------ccCCHHHH
Confidence 11234578899999999999999999999999888887653 34567654
No 329
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=339.34 Aligned_cols=262 Identities=24% Similarity=0.330 Sum_probs=214.0
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.++|.|++.||.|+||.|.+++++.+++.||+|++.+. ...-|..|-.+|-.-+ ..-|..+++.+.+..+.|+
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccceEE
Confidence 46899999999999999999999999999999986552 2334666777766544 6677778888899999999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
||||+ ||+|-.++.... +++++.+..++..|+.||.-||+.|+|||||||+|||| +..|++||+|||.|-.+..+
T Consensus 153 VMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCCC
Confidence 99999 999999998666 89999999999999999999999999999999999999 58999999999999888765
Q ss_pred CCccccccccCCCcccCcccccccccc----C-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHL----G-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS 233 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~----~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 233 (473)
.... ....+|||-|.|||++. + +.|++.+|+||+||++|||+.|..||.. ....+.|.+|...+-.
T Consensus 229 G~V~------s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa---dslveTY~KIm~hk~~ 299 (1317)
T KOG0612|consen 229 GTVR------SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA---DSLVETYGKIMNHKES 299 (1317)
T ss_pred CcEE------eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH---HHHHHHHHHHhchhhh
Confidence 4422 24569999999999986 3 4699999999999999999999999976 4556778888776443
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCC---HHHHHHHHHHHHHHhCCCCCCcccccccc
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDDKPD---YAYLKRLFRDLFIREGFQFDYVFDWTILK 293 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt---~~~l~~~L~~l~~~~~~~~~~~~dw~~~~ 293 (473)
...+.. ..++++.++||...+. +|+.|.. ++++. .+ +|..-.||...+
T Consensus 300 l~FP~~-~~VSeeakdLI~~ll~-~~e~RLgrngiedik---~H-------pFF~g~~W~~iR 350 (1317)
T KOG0612|consen 300 LSFPDE-TDVSEEAKDLIEALLC-DREVRLGRNGIEDIK---NH-------PFFEGIDWDNIR 350 (1317)
T ss_pred cCCCcc-cccCHHHHHHHHHHhc-ChhhhcccccHHHHH---hC-------ccccCCChhhhh
Confidence 333321 2378999999999874 6888877 55443 22 445567897654
No 330
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.8e-36 Score=294.07 Aligned_cols=238 Identities=22% Similarity=0.263 Sum_probs=184.6
Q ss_pred eEeecCceEEEEEEEcCCCcEEEEEEcccCCc------hhHHHHHHHHHHhc--CCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~------~~l~~E~~il~~L~--~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
.||+|+||.||+|.+..+++.||||++.+... .....|..+++.+. +++++..+..+....+..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 48999999999999999999999998544321 12344544444443 3566666677777788899999999
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
|++|.+++.. ...+++..++.|+.|++.||.|||+.+|+||||||+|||++ .++.+||+|||++..+.....
T Consensus 81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg~~~~~~~~~~---- 152 (278)
T cd05606 81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKP---- 152 (278)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCcCccccCccCC----
Confidence 8899988864 45699999999999999999999999999999999999994 678899999999976543221
Q ss_pred ccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 165 PYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
....|+..|+|||++.+. .++.++|||||||++|||++|..||.+................. ..+...+
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 222 (278)
T cd05606 153 -----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VELPDSF 222 (278)
T ss_pred -----cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccC-----CCCCCcC
Confidence 245789999999999754 68999999999999999999999998754322222221111111 1123456
Q ss_pred cHHHHHHHHHHhcCCCCCCC-----CHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKP-----DYAYLK 269 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RP-----t~~~l~ 269 (473)
+.++.+++.+||..+|.+|| ++.++.
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 253 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 253 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHH
Confidence 89999999999999999999 777664
No 331
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.6e-36 Score=304.31 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=196.7
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeC----CeEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEG----DYNV 78 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~----~~~~ 78 (473)
+|++.+.||.|+||.||+|.+..+++.||||.+... ....+..|+.+++.++|.+++..+..+.... ...+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 699999999999999999999888999999985432 2346888999999998655555444333322 3679
Q ss_pred EEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 79 LVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 79 lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
++|+|++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.++|+|||++......
T Consensus 81 lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~---~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN---SNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccCceEeeccc
Confidence 9999999899998873 44799999999999999999999999999999999999994 6789999999999876554
Q ss_pred CCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc------
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK------ 231 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~------ 231 (473)
.... .......++..|+|||++.+. .++.++|||||||++|+|++|..||.+.... +.+..+....
T Consensus 157 ~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~ 229 (330)
T cd07834 157 EDEK----GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI---DQLNLIVEVLGTPSEE 229 (330)
T ss_pred cccc----ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH---HHHHHHHHhcCCCChh
Confidence 2110 112345688999999999988 7899999999999999999999999775432 1122111100
Q ss_pred --------------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 --------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 --------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.......+...++.++.++|..||+.+|++||++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll 287 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEAL 287 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 01112223345789999999999999999999988774
No 332
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=304.86 Aligned_cols=260 Identities=19% Similarity=0.270 Sum_probs=203.1
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc--CCchhHHHHHHHHHHhcCC-----CCCCeeEEeeEeCCe
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK--TKHPQLQYEAKLYKILQGG-----TGIPNLRWFGVEGDY 76 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~--~~~~~l~~E~~il~~L~~~-----~~i~~~~~~~~~~~~ 76 (473)
.+.++|.++.+||+|.||.|-.+.+..++..||||++.. .-.+...-|+++|++|... +-+.++..++.....
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 357899999999999999999999999999999998433 3344567799999999532 234445555667778
Q ss_pred EEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCC----------------
Q 011988 77 NVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR---------------- 139 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~---------------- 139 (473)
.|||+|.+|.|+.+++...+ .+|+...+..|+.||+++++|||+.+++|-||||+|||+...+
T Consensus 166 iCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 166 ICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred eEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceecc
Confidence 89999999999999998533 4699999999999999999999999999999999999996321
Q ss_pred -CCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 011988 140 -RANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 218 (473)
Q Consensus 140 -~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~ 218 (473)
+...|+|+|||.|+.-.... ...+.|..|.|||+++|..++.++||||+||||+|+++|...|+...+.
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~h----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHH----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred CCCcceEEEecCCcceeccCc----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 13468999999998544322 3568899999999999999999999999999999999999999987655
Q ss_pred CHHHHHHHHhhccccccHHHH----------------------------hc-------C---CcHHHHHHHHHHhcCCCC
Q 011988 219 TKKQKYEKISEKKVSTSIEAL----------------------------CR-------G---YPTEFASYFHYCRSLRFD 260 (473)
Q Consensus 219 ~~~~~~~~i~~~~~~~~~~~l----------------------------~~-------~---~p~~l~~li~~cl~~dp~ 260 (473)
+....++.|........+..- |+ . --.+|.+||+.||.+||.
T Consensus 316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 316 EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 545455555432211111111 00 0 014588999999999999
Q ss_pred CCCCHHHHHHHHHHHH
Q 011988 261 DKPDYAYLKRLFRDLF 276 (473)
Q Consensus 261 ~RPt~~~l~~~L~~l~ 276 (473)
+|+|+.|+ |.+.|
T Consensus 396 ~RiTl~EA---L~HpF 408 (415)
T KOG0671|consen 396 RRITLREA---LSHPF 408 (415)
T ss_pred ccccHHHH---hcCHH
Confidence 99996665 54444
No 333
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.3e-36 Score=300.95 Aligned_cols=244 Identities=23% Similarity=0.316 Sum_probs=195.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.+.|.+.+.||+|+||.||+|.+..+++.||||++.... ...+..|+.+++.++|++ +..+..+.......++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~~~~l 102 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN-SIEYKGCYLREHTAWL 102 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCC-EEEEEEEEeeCCeEEE
Confidence 345889999999999999999999999999999854321 234778999999998554 5555566677788899
Q ss_pred EEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 80 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 80 v~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
+|||+.++|.+++.....++++..+..++.||+.||.|||++||+||||+|+||+++ .++.++|+|||++......
T Consensus 103 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 103 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASIASPA- 178 (317)
T ss_pred EEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---CCCCEEEecCCCccccCCc-
Confidence 999998899998876677799999999999999999999999999999999999994 6789999999998754321
Q ss_pred CccccccccCCCcccCcccccccccc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
....|+..|+|||.+. +..++.++|||||||++|||++|..||..... ...+..+........
T Consensus 179 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~- 244 (317)
T cd06635 179 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNESPTL- 244 (317)
T ss_pred ----------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHhccCCCC-
Confidence 2346889999999974 34688999999999999999999999976432 222222222111111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
....+++.+.+++.+||..+|.+||++.+|.+
T Consensus 245 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 276 (317)
T cd06635 245 --QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLK 276 (317)
T ss_pred --CCccccHHHHHHHHHHccCCcccCcCHHHHHh
Confidence 12346788999999999999999999888854
No 334
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.6e-36 Score=295.55 Aligned_cols=252 Identities=18% Similarity=0.290 Sum_probs=190.9
Q ss_pred eEEEeeEeecCceEEEEEEEc---CCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC-----C
Q 011988 9 FRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG-----D 75 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~-----~ 75 (473)
|.+.+.||+|+||.||+|.+. .+++.||||+..... ..++..|+++++.+.|++++..+..+.... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 678899999999999999865 357899999854432 234778999999998665555444332211 1
Q ss_pred eEEEEEecC-CCCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEec
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCS-----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 149 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~-----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 149 (473)
..+++++|+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~---~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc---CCCCEEECcc
Confidence 346778887 789988864221 2478999999999999999999999999999999999994 6788999999
Q ss_pred CCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHh
Q 011988 150 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKIS 228 (473)
Q Consensus 150 Gla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~ 228 (473)
|+++....... +.......++..|++||.+.+..++.++|||||||++|||++ |..||.+... ...+..+.
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~~~ 229 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNYLI 229 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHHHH
Confidence 99986543221 111123355678999999998889999999999999999999 8999976433 22222222
Q ss_pred hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 229 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 229 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
..... .....++..+.+++..||+.+|++||++.++.+.|+.+
T Consensus 230 ~~~~~----~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 KGNRL----KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 21110 11235778999999999999999999999999998865
No 335
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=321.40 Aligned_cols=247 Identities=19% Similarity=0.318 Sum_probs=199.4
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
+.|.|+..||.|+||.||+|.++.++...|-|++... ...++..|+.||..+.|+.++..+..|+.+ +..+|.+||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e-nkLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE-NKLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc-CceEEEEee
Confidence 4588999999999999999999988888888985443 345678899999999966666655555544 456888899
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 84 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
| ||-...++-..++.+.+.++..+++|++.||.|||+++|||||||..|||++ -+|.|+|+|||.+-.......
T Consensus 111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdirLADFGVSAKn~~t~q-- 185 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIRLADFGVSAKNKSTRQ-- 185 (1187)
T ss_pred cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEeeecccccccchhHHh--
Confidence 9 6677777777888999999999999999999999999999999999999997 678999999999865433211
Q ss_pred ccccccCCCcccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 163 HIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
....|.||++|||||+.. ..+|+.++||||||++|.||..+.+|...++.. ..+.+|.....++.+
T Consensus 186 -----kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM---RVllKiaKSePPTLl- 256 (1187)
T KOG0579|consen 186 -----KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM---RVLLKIAKSEPPTLL- 256 (1187)
T ss_pred -----hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH---HHHHHHhhcCCCccc-
Confidence 235789999999999876 457999999999999999999999999887653 233333333322221
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
-+..++..|.+|+..||.+||+.||++++|+
T Consensus 257 -qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll 287 (1187)
T KOG0579|consen 257 -QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLL 287 (1187)
T ss_pred -CcchhhhHHHHHHHHHHhcCCccCCCHHHHh
Confidence 2345778999999999999999999998874
No 336
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.7e-36 Score=306.60 Aligned_cols=247 Identities=22% Similarity=0.327 Sum_probs=194.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeC-----
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEG----- 74 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~----- 74 (473)
+.++|.+.+.||.|+||.||+|.+..+++.||||+.... ....+..|+.+++.+.|++++..+..+....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 678999999999999999999999999999999985432 1234668999999998766665554333222
Q ss_pred CeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 75 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 75 ~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
...++|+||++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+||+|||++..
T Consensus 93 ~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~---~~~~~kL~dfg~~~~ 167 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVK--CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFGLARH 167 (343)
T ss_pred ccEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEcccccccc
Confidence 2479999999999999987 35699999999999999999999999999999999999995 678899999999986
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc--
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-- 231 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~-- 231 (473)
.... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||.+... ...+..+....
T Consensus 168 ~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~---~~~~~~i~~~~~~ 234 (343)
T cd07851 168 TDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH---IDQLKRIMNLVGT 234 (343)
T ss_pred cccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCC
Confidence 5432 1234678899999998763 578999999999999999999999976433 22222221110
Q ss_pred ------------------------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 ------------------------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 ------------------------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.......+...+++++.++|..||+.||++|||+.+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell 296 (343)
T cd07851 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEAL 296 (343)
T ss_pred CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHh
Confidence 00111223345688999999999999999999988774
No 337
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.1e-36 Score=286.45 Aligned_cols=246 Identities=25% Similarity=0.396 Sum_probs=198.5
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
+|.+.+.||+|++|.||++.+..+++.|++|+.... ....+..|+.+++.+. ++++..+..+.......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEEecC
Confidence 488999999999999999999889999999985443 3456889999999999 455555666666778889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++......+++..+..++.|++.||.|||++|++|+||+|+||+++ +.+.++|+|||++........
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeecccccccccccc---
Confidence 5899999986556799999999999999999999999999999999999995 678999999999987654321
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
.....|+..|++||.+.+..++.++|||||||++|+|++|..||...... ............... ....+
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~--~~~~~ 223 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM---KALFKIATNGPPGLR--NPEKW 223 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHHhcCCCCcC--ccccc
Confidence 13457889999999999888999999999999999999999999765322 222222211111110 01124
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
+.++.++|..||..||++||++.++++
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 224 SDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 789999999999999999999888753
No 338
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.8e-36 Score=289.15 Aligned_cols=250 Identities=24% Similarity=0.404 Sum_probs=196.6
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|.+.+.||+|+||.||+|.+..+++.|+||+..... ...+..|+.+++.++|.+ |..+..+....+..++++|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~-i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPN-LVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCC-hhheeeeEecCCEEEEEEe
Confidence 6999999999999999999998899999999854433 345788999999998654 4555556677788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++.. ...+++..+..|+.|++.||.|||++||+|+||+|+||+++ ..+.+||+|||++.........
T Consensus 80 ~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 80 YCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred cCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEcccccccccCCCCCc
Confidence 98 7899999874 34589999999999999999999999999999999999995 6789999999999876554321
Q ss_pred cccccccCCCcccCccccccccccCCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIE---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~---~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
... ......++..|+|||++.+.. ++.++|||||||++|||++|..||..... .......+.... ...++.
T Consensus 156 ~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~-~~~~~~ 229 (264)
T cd06626 156 MGE---EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN--EFQIMFHVGAGH-KPPIPD 229 (264)
T ss_pred ccc---cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc--hHHHHHHHhcCC-CCCCCc
Confidence 100 012356889999999998776 88999999999999999999999976532 122222222111 111111
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
...++..+.++|..||..+|++||++.++.
T Consensus 230 -~~~~~~~~~~li~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 230 -SLQLSPEGKDFLDRCLESDPKKRPTASELL 259 (264)
T ss_pred -ccccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 123578999999999999999999988874
No 339
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=7.3e-36 Score=298.03 Aligned_cols=243 Identities=23% Similarity=0.330 Sum_probs=194.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.+.|...++||+|+||.||+|.+..+++.|+||++.... ...+..|+.+++.++|. ++..+..++......++
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~l 98 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHP-NTIEYKGCYLKEHTAWL 98 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCC-CCccEEEEEEeCCEEEE
Confidence 345777889999999999999999999999999854322 13467899999999855 45555666677888999
Q ss_pred EEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 80 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 80 v~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
+|||+.++|.+++......+++.+++.++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++.....
T Consensus 99 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 99 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCEEEeecCCCcccCC--
Confidence 999999999999876667799999999999999999999999999999999999994 678899999999864321
Q ss_pred CccccccccCCCcccCcccccccccc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
.....|+..|+|||++. +..++.++|||||||++|||++|..||....... ....+.......
T Consensus 174 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~---~~~~~~~~~~~~-- 239 (313)
T cd06633 174 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---ALYHIAQNDSPT-- 239 (313)
T ss_pred ---------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhcCCCC--
Confidence 13457899999999985 3568899999999999999999999997754322 222222211111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.....++..+.+++.+||+.+|.+||++.++.
T Consensus 240 -~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l 271 (313)
T cd06633 240 -LQSNEWTDSFRGFVDYCLQKIPQERPASAELL 271 (313)
T ss_pred -CCccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 11235678899999999999999999988775
No 340
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.5e-36 Score=293.63 Aligned_cols=249 Identities=21% Similarity=0.310 Sum_probs=195.7
Q ss_pred ceEEEeeEeecCceEEEEEEEcC-CCcEEEEEEcccCC-------------chhHHHHHHHHHHhcCCCCCCeeEEeeEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLNVKTK-------------HPQLQYEAKLYKILQGGTGIPNLRWFGVE 73 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~-~~~~vAiK~~~~~~-------------~~~l~~E~~il~~L~~~~~i~~~~~~~~~ 73 (473)
.|++.+.||+|+||.||+|.+.. .++.+|+|.+.... ...+..|+.++.....|+++..+..++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999887 67899999743211 12355677777664445666666666677
Q ss_pred CCeEEEEEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEe
Q 011988 74 GDYNVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIID 148 (473)
Q Consensus 74 ~~~~~lv~e~~-g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~D 148 (473)
....+++|||+ +++|.+++.. ....+++..++.++.|++.||.|||+ .||+|+||||+|||++ ..+.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~---~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC---CCCcEEEec
Confidence 88999999998 7899998753 34568999999999999999999996 7899999999999994 778999999
Q ss_pred cCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHh
Q 011988 149 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 228 (473)
Q Consensus 149 FGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~ 228 (473)
||++........ .....|+..|++||.+.+..++.++|||||||++|||++|+.||..... ......+.
T Consensus 158 fg~~~~~~~~~~--------~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~---~~~~~~~~ 226 (269)
T cd08528 158 FGLAKQKQPESK--------LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM---LSLATKIV 226 (269)
T ss_pred ccceeecccccc--------cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH---HHHHHHHh
Confidence 999986544321 1345789999999999998899999999999999999999999965432 22222332
Q ss_pred hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 229 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 229 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
....... ....+++++.++|.+||..||++||++.++...+.
T Consensus 227 ~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 227 EAVYEPL---PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hccCCcC---CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 2222111 11256789999999999999999999999988764
No 341
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5e-36 Score=293.35 Aligned_cols=236 Identities=21% Similarity=0.248 Sum_probs=185.7
Q ss_pred EeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
||+|+||.||+|.+..+++.||+|++.... ...+..|+.+++.++| +++..+.......+..+++|||+ +++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS-RFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC-CCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999999999999999854321 2335679999999984 55555555556677889999999 789
Q ss_pred HHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccccc
Q 011988 88 LEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166 (473)
Q Consensus 88 L~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~ 166 (473)
|.+++.... ..+++..++.++.||+.||.|||++||+|+||+|+||+++ .++.++|+|||++........
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~------ 150 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGLAVELKGGKK------ 150 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccCcchhhhccCCc------
Confidence 999987543 3699999999999999999999999999999999999994 678999999999976543211
Q ss_pred ccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHH
Q 011988 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 246 (473)
Q Consensus 167 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 246 (473)
.....++..|++||.+.+..++.++|||||||++|+|++|+.||...........+... .. .....+...++++
T Consensus 151 --~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~ 224 (277)
T cd05577 151 --IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRR---TL-EMAVEYPDKFSPE 224 (277)
T ss_pred --cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhc---cc-cccccCCccCCHH
Confidence 13446788999999999888999999999999999999999999775442222222111 11 1111233457899
Q ss_pred HHHHHHHHhcCCCCCCCCHH
Q 011988 247 FASYFHYCRSLRFDDKPDYA 266 (473)
Q Consensus 247 l~~li~~cl~~dp~~RPt~~ 266 (473)
+.++|.+||..+|++||++.
T Consensus 225 ~~~li~~~l~~~p~~R~~~~ 244 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCR 244 (277)
T ss_pred HHHHHHHHccCChhHccCCC
Confidence 99999999999999999443
No 342
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2e-36 Score=299.16 Aligned_cols=246 Identities=22% Similarity=0.305 Sum_probs=194.8
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.++|++.+.||+|+||.||++.+..++..||+|...... ...+..|+.+++.+.|+ ++..+..++...+..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp-~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHP-NIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCC-CeeehhheeeeCCcEEEEEe
Confidence 478999999999999999999998899999999854322 33577899999999854 55555556667788899999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++.. ..+++..+..++.||+.||.|||++||+|+||||+||+++ ..+.++|+|||++........
T Consensus 97 ~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL~dfg~~~~~~~~~~- 170 (293)
T cd06647 97 YLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQS- 170 (293)
T ss_pred cCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEEccCcceeccccccc-
Confidence 99 8899999873 4688999999999999999999999999999999999994 678899999999876543322
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
......|+..|++||.+.+..++.++|||||||++|++++|..||....... .+..+..... .. .....
T Consensus 171 ------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~---~~~~~~~~~~-~~-~~~~~ 239 (293)
T cd06647 171 ------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYLIATNGT-PE-LQNPE 239 (293)
T ss_pred ------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh---heeehhcCCC-CC-CCCcc
Confidence 1133578899999999998889999999999999999999999997643211 1111111000 00 01123
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.++..+.++|..||..+|++||++.+++
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il 267 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELL 267 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 4678899999999999999999988774
No 343
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.8e-36 Score=288.80 Aligned_cols=245 Identities=23% Similarity=0.285 Sum_probs=199.6
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|.+.+.||.|+||.||++.+..+++.|++|++... ....+..|+++++.++|++.+. +..........++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~-~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIK-YYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhh-eEEEEecCCEEEEEEE
Confidence 589999999999999999999989999999985443 2345788999999999555554 4444555688899999
Q ss_pred cC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 83 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 83 ~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
++ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||+|+||+++ ..+.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEEECCccceeecccC
Confidence 99 67999998754 36799999999999999999999999999999999999994 6789999999999876543
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.. ......|+..|+|||.+.+..++.++||||||+++|+|++|..||.... ............ ...
T Consensus 157 ~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---~~~~~~~~~~~~----~~~ 222 (258)
T cd08215 157 VD-------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN---LLELALKILKGQ----YPP 222 (258)
T ss_pred cc-------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc---HHHHHHHHhcCC----CCC
Confidence 31 1134578999999999999889999999999999999999999997643 223333322222 122
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
+...++.++.+++..||..+|++||++.++++
T Consensus 223 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 223 IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 34467899999999999999999999888754
No 344
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.6e-36 Score=294.30 Aligned_cols=247 Identities=26% Similarity=0.399 Sum_probs=199.3
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
++|.+.+.||.|+||.||+|.+..+++.||+|+..+. ....+..|..+++.+..+++|..+..+.......+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 5799999999999999999999999999999985442 1245778899999998455666666566777889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||++ +++|.+++... ..+++..++.|+.||+.||.|||++|++|+||||+||+++ .++.++|+|||++..+....
T Consensus 81 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEecCCccccccCCcc
Confidence 9999 99999999753 4799999999999999999999999999999999999994 67899999999998765433
Q ss_pred Cccc-------------cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHH
Q 011988 160 THQH-------------IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK 226 (473)
Q Consensus 160 ~~~~-------------~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~ 226 (473)
.... ........+.|+..|+|||++.+..++.++|||||||++|++++|..||.... ....+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~~~~~ 233 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN---EYLTFQK 233 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHH
Confidence 2110 01123345678899999999998889999999999999999999999998653 2222333
Q ss_pred HhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCH
Q 011988 227 ISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 227 i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 265 (473)
+..... .+...+++.+.++|..||+.+|++||++
T Consensus 234 ~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 234 ILKLEY-----SFPPNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred HHhcCC-----CCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence 322111 1234568999999999999999999998
No 345
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.2e-36 Score=295.94 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=200.6
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
..+.|++.+.||+|+||.||+|.+..++..|++|++.... ...+..|+.+++.++|. ++..+..+.......++++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHP-NIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCC-CeeEEEEEEEECCEEEEEEe
Confidence 4567999999999999999999998889999999865544 45688999999999864 55556666677788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|+ +++|.+++......+++..++.++.||+.||.|||+.||+|+||||+||+++ .++.++|+|||++........
T Consensus 96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~- 171 (286)
T cd06614 96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGSVKLADFGFAAQLTKEKS- 171 (286)
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCCEEECccchhhhhccchh-
Confidence 99 5899999986544799999999999999999999999999999999999994 678999999999876543221
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
......++..|++||.+.+..++.++|||||||++|+|++|..||..... ......+....... .. ...
T Consensus 172 ------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~-~~-~~~ 240 (286)
T cd06614 172 ------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP---LRALFLITTKGIPP-LK-NPE 240 (286)
T ss_pred ------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcCCCC-Cc-chh
Confidence 11234678899999999988899999999999999999999999976432 22222222221111 11 123
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.++.++.++|..||+.+|.+||++.+|+
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~~il 268 (286)
T cd06614 241 KWSPEFKDFLNKCLVKDPEKRPSAEELL 268 (286)
T ss_pred hCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 4789999999999999999999988773
No 346
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4e-36 Score=294.22 Aligned_cols=251 Identities=23% Similarity=0.285 Sum_probs=193.3
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
|.+.+.||.|+||.||+|.+..+++.|+||...... .....+|+..++.+..++++..+..+...+...+++|||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 788999999999999999998899999999854332 2234568889999984455555555556688889999999
Q ss_pred CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++.... ..+++..++.++.||+.+|.|||++||+|+||||+||+++ +.+.++|+|||+++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~l~d~~~~~~~~~~~~--- 154 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVKIADFGLAREIRSRPP--- 154 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEEEeecccceeccCCCC---
Confidence 999999887543 4689999999999999999999999999999999999994 788999999999986544221
Q ss_pred cccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-----------
Q 011988 164 IPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK----------- 231 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~----------- 231 (473)
.....++..|+|||++.+ ..++.++||||||+++|||++|..||......+.......+....
T Consensus 155 -----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 155 -----YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred -----cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 123568899999998864 447899999999999999999999997654322221111111000
Q ss_pred -----------ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 232 -----------VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 232 -----------~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.......+....+.++.++|..||..+|++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 001112222334688999999999999999999887743
No 347
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=8.4e-36 Score=286.13 Aligned_cols=248 Identities=24% Similarity=0.351 Sum_probs=200.3
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeC--CeEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEG--DYNVLV 80 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~--~~~~lv 80 (473)
+|.+.+.||+|++|.||+|.+..+++.|++|+..... ...+..|+.+++.++|++++ .+..+.... ...+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIV-RYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEe-eEEEEEecCCCCeEEEE
Confidence 5899999999999999999998899999999855444 45688899999999955554 444444555 788999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
+|++ +++|.+++.... .+++..++.++.|++.||.|||+.|++|+||+|+||+++ ..+.++|+|||.+.......
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccEEeccccc
Confidence 9999 899999998544 899999999999999999999999999999999999995 67899999999998776543
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
.. .......++..|++||.+.+..++.++|||||||++|+|++|..||.... ........+... .....+
T Consensus 156 ~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~---~~~~~~ 225 (260)
T cd06606 156 TG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG--NPMAALYKIGSS---GEPPEI 225 (260)
T ss_pred cc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHhcccc---CCCcCC
Confidence 21 01134578899999999998889999999999999999999999998754 222222222211 111223
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
...++.++.++|.+||..+|++||++.++.+
T Consensus 226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 4456899999999999999999999888753
No 348
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.9e-36 Score=293.73 Aligned_cols=243 Identities=17% Similarity=0.273 Sum_probs=192.0
Q ss_pred ceEEEeeEeecCceEEEEEEEc---CCCcEEEEEEcccCC-------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLNVKTK-------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYN 77 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAiK~~~~~~-------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~ 77 (473)
+|++.+.||.|+||.||+|.+. .+|+.||+|++.... ...+..|+.+++.+.++++|..+..+...+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 5899999999999999999875 478999999854321 244678999999998888888888777888889
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+++|||+ +++|.+++.. ...+++..+..++.||+.||.|||+.|++||||||+|||++ .++.+||+|||++..+.
T Consensus 81 ~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCEEEeeCccceecc
Confidence 9999999 7899999874 45689999999999999999999999999999999999994 67899999999998664
Q ss_pred CCCCccccccccCCCcccCccccccccccCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
..... ......|+..|+|||.+.+. .++.++|||||||++|+|++|..||...........+........
T Consensus 157 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-- 228 (290)
T cd05613 157 EDEVE------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-- 228 (290)
T ss_pred ccccc------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC--
Confidence 43211 11245689999999998764 367899999999999999999999975332211121211111111
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCC
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPD 264 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt 264 (473)
..+...+++.+.+++.+||..||++||+
T Consensus 229 --~~~~~~~~~~~~~ll~~~l~~~p~~R~~ 256 (290)
T cd05613 229 --PPYPQEMSALAKDIIQRLLMKDPKKRLG 256 (290)
T ss_pred --CCCCccCCHHHHHHHHHHhcCCHHHhcC
Confidence 1123457889999999999999999983
No 349
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4e-37 Score=317.70 Aligned_cols=267 Identities=22% Similarity=0.299 Sum_probs=202.7
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc----CCchhHHHHHHHHHHhcCCCCCCeeEEeeEe------C
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVE------G 74 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~------~ 74 (473)
....|...+.||+|+||.||+|+++.+|+.||||...+ ...+...+|+++|++|+|.|+|..+ ..... .
T Consensus 11 ~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f-~iee~~~~~~~~ 89 (732)
T KOG4250|consen 11 ENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLF-DIEETKFLGLVT 89 (732)
T ss_pred CCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhc-ccCCccccCccc
Confidence 35568888999999999999999999999999998544 2345578999999999955555443 33222 3
Q ss_pred CeEEEEEecC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC-CCcEEEEecC
Q 011988 75 DYNVLVIDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFG 150 (473)
Q Consensus 75 ~~~~lv~e~~-g~sL~~~l~~~~--~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-~~~vkL~DFG 150 (473)
...+++|||| ||||..+++... ..+++.+++.++.+++.||.|||++|||||||||.||++-.+.+ .-..||+|||
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 4568999999 999999997432 35999999999999999999999999999999999999965443 3346999999
Q ss_pred CcccccCCCCccccccccCCCcccCccccccccccC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC-HHHHHHHHh
Q 011988 151 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT-KKQKYEKIS 228 (473)
Q Consensus 151 la~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~-~~~~~~~i~ 228 (473)
.|+.+.+... ...++||..|.+||++.. ..|+..+|.|||||++|+++||.+||-...... ..+....+.
T Consensus 170 ~Arel~d~s~--------~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~ 241 (732)
T KOG4250|consen 170 AARELDDNSL--------FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHII 241 (732)
T ss_pred ccccCCCCCe--------eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhh
Confidence 9998877652 357899999999999995 789999999999999999999999996543321 122222222
Q ss_pred hccccc--------------------cHHHHhcCCcHHHHHHHHHHhcCCCCCCC--CHHHHHHHHHHHHHHhC
Q 011988 229 EKKVST--------------------SIEALCRGYPTEFASYFHYCRSLRFDDKP--DYAYLKRLFRDLFIREG 280 (473)
Q Consensus 229 ~~~~~~--------------------~~~~l~~~~p~~l~~li~~cl~~dp~~RP--t~~~l~~~L~~l~~~~~ 280 (473)
.++... ....++..+-..+...+..+|..+|.+|- .+.+....+.+++...-
T Consensus 242 tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~v 315 (732)
T KOG4250|consen 242 TKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKV 315 (732)
T ss_pred ccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhhe
Confidence 111111 01112222234566778888889999998 77777777777776554
No 350
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=344.85 Aligned_cols=258 Identities=22% Similarity=0.337 Sum_probs=207.9
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEc-----ccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-----VKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~-----~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
.-+|.-..+||.|.||.||.|.+..+|+..|+|-+ .....+.+..|..++..|+|++ ++.++++.++.+..+|.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpN-lV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPN-LVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCcc-ccccCceeecHHHHHHH
Confidence 44688889999999999999999999999999952 2333456889999999999554 55666677888889999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||| ||+|.+++. .++..++.....+..|++.||.|||+.|||||||||+|||++ .++.+|++|||.|..+....
T Consensus 1313 MEyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld---~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD---FNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee---cCCcEEeecccceeEecCch
Confidence 9999 999999998 566678888888999999999999999999999999999994 77899999999999887653
Q ss_pred CccccccccCCCcccCccccccccccCCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIE---QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~---~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
+.+| .+.....||+.|||||++.|.. -..++||||||||+.||+||+.||..++. ..+.+.++.....+.
T Consensus 1389 --~~~~-~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--e~aIMy~V~~gh~Pq-- 1461 (1509)
T KOG4645|consen 1389 --QTMP-GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--EWAIMYHVAAGHKPQ-- 1461 (1509)
T ss_pred --hcCC-HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc--hhHHHhHHhccCCCC--
Confidence 1222 3446789999999999998754 56789999999999999999999988754 344444443333222
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhC
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREG 280 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~ 280 (473)
++..++.+-.+||..||..||+.|.++.+ +|++.|-+.+
T Consensus 1462 --~P~~ls~~g~dFle~Cl~~dP~~Rw~~~q---lle~~f~~~~ 1500 (1509)
T KOG4645|consen 1462 --IPERLSSEGRDFLEHCLEQDPKMRWTASQ---LLEHAFGKSC 1500 (1509)
T ss_pred --CchhhhHhHHHHHHHHHhcCchhhhHHHH---HHHhhccccc
Confidence 23347889999999999999999977654 4666665443
No 351
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.1e-36 Score=293.93 Aligned_cols=244 Identities=20% Similarity=0.285 Sum_probs=193.9
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
.|...++||+|++|.||++.+..+++.|+||+.... ....+.+|+.+++.+.|++.+ .+..+....+..++++||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv-~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV-EMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChh-eEEEEEEcCCeEEEEEecc
Confidence 566778999999999999999889999999985332 233477899999999865544 4555556778889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++.. .++++..++.++.||+.||.|||++||+||||||+||+++ .++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~d~g~~~~~~~~~~--- 170 (285)
T cd06648 99 EGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRVKLSDFGFCAQVSKEVP--- 170 (285)
T ss_pred CCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcEEEcccccchhhccCCc---
Confidence 8899999874 5699999999999999999999999999999999999994 678999999999875543221
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
......|+..|+|||.+.+..++.++|||||||++|||++|..||..... ...+..+....... .. ....+
T Consensus 171 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~---~~~~~~~~~~~~~~-~~-~~~~~ 241 (285)
T cd06648 171 ----RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP---LQAMKRIRDNLPPK-LK-NLHKV 241 (285)
T ss_pred ----ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH---HHHHHHHHhcCCCC-Cc-ccccC
Confidence 11235689999999999988899999999999999999999999976432 23333333221111 11 12237
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
+..+.++|.+||..+|++||++.+++
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~il 267 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAELL 267 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHc
Confidence 88999999999999999999987774
No 352
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.1e-36 Score=298.35 Aligned_cols=244 Identities=21% Similarity=0.312 Sum_probs=194.1
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC---C---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---K---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.+.|.+.+.||.|+||.||+|.+..+++.||||..... . ...+..|+++++.++|++.+. +..+.......++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~l 92 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ-YRGCYLREHTAWL 92 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCccc-EEEEEEcCCeeEE
Confidence 45688889999999999999999999999999985422 1 234678999999998665555 4455566788899
Q ss_pred EEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 80 VIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 80 v~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||||+.++|.+++......+++.+++.++.|++.||.|||+++++||||||+|||++ .++.++|+|||++......
T Consensus 93 v~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CCCcEEECCcccceeecCc-
Confidence 999998899988876667799999999999999999999999999999999999994 6789999999998765322
Q ss_pred CccccccccCCCcccCccccccccccC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~---~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
....|+..|+|||.+.+ ..++.++|||||||++|+|++|..||....... ....+.......
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~-- 233 (308)
T cd06634 169 ----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---ALYHIAQNESPA-- 233 (308)
T ss_pred ----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH---HHHHHhhcCCCC--
Confidence 23568899999999853 457889999999999999999999997654321 111222111111
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.....++..+.++|.+||..+|++||++.++++
T Consensus 234 -~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 234 -LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred -cCcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 112357789999999999999999999888754
No 353
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.8e-37 Score=311.29 Aligned_cols=245 Identities=24% Similarity=0.305 Sum_probs=203.1
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc-----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH-----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~-----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
...+.|.+.+.||+|.|+.|.+|++..++..||||++.++.. ..+.+|+++|+.|+|+++| .++.+-......|
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIv-kl~~v~~t~~~ly 131 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIV-KLFSVIETEATLY 131 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCccee-eeeeeeeecceeE
Confidence 445779999999999999999999999999999999776553 3368999999999965554 4555556677889
Q ss_pred EEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+||||+ ++.+.+++...++ ..+.++..++.|++.|++|||+++|||||||.+|||| +.+..+||+|||++..+..
T Consensus 132 lV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeecc
Confidence 999999 9999999986554 5569999999999999999999999999999999999 4777899999999988864
Q ss_pred CCCccccccccCCCcccCccccccccccCCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~-s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
... ..+++|++.|+|||++.|.+| ++.+|+||+|++||-|+.|.+||++..- +..-.++...++..
T Consensus 208 ~~~--------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l---k~Lr~rvl~gk~rI-- 274 (596)
T KOG0586|consen 208 GLM--------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL---KELRPRVLRGKYRI-- 274 (596)
T ss_pred ccc--------ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc---ccccchheeeeecc--
Confidence 332 257899999999999999986 7999999999999999999999987432 22223333333332
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.-.++.+..++|.++|.++|.+|++.+++.
T Consensus 275 ---p~~ms~dce~lLrk~lvl~Pskr~~~dqim 304 (596)
T KOG0586|consen 275 ---PFYMSCDCEDLLRKFLVLNPSKRGPCDQIM 304 (596)
T ss_pred ---cceeechhHHHHHHhhccCccccCCHHHhh
Confidence 224567899999999999999999987763
No 354
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-35 Score=285.15 Aligned_cols=243 Identities=24% Similarity=0.352 Sum_probs=198.4
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|++.+.||+|+||.||++.+..+++.|+||...... ...+..|+++++.+.|++ +..+..+.......+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN-IVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCC-ccEEEEEEEeCCEEEEEEe
Confidence 5899999999999999999998899999999854443 245788999999998654 5555555667788999999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
++ +++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++ ..+.++|+|||++.........
T Consensus 80 ~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 80 YAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred cCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEeccccceecCCCccc
Confidence 99 67999998754 5799999999999999999999999999999999999995 5789999999999876543321
Q ss_pred cccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhc
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCR 241 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 241 (473)
.....++..|+|||.+.+..++.++||||||+++|+|++|..||..... ...+..+..... ..+..
T Consensus 156 -------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~----~~~~~ 221 (254)
T cd06627 156 -------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---MAALFRIVQDDH----PPLPE 221 (254)
T ss_pred -------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHhccCC----CCCCC
Confidence 1345788999999999888889999999999999999999999976442 222222221111 12335
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 242 GYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 242 ~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.++.++.+++..||..+|++||++.+++
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l 249 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLL 249 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHh
Confidence 6789999999999999999999988875
No 355
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=290.72 Aligned_cols=260 Identities=17% Similarity=0.207 Sum_probs=206.3
Q ss_pred ccCCceEEE-eeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeE----eCCeEE
Q 011988 4 RVGNKFRLG-RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV----EGDYNV 78 (473)
Q Consensus 4 ~i~~~y~i~-~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~----~~~~~~ 78 (473)
.|.++|.+- ++||-|-.|.|-.|.++.+++.+|+|++.. .+...+|+++.-....|++|+.+..+.. ......
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 466788875 679999999999999999999999998533 3446789999988888888877654432 345678
Q ss_pred EEEecC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc
Q 011988 79 LVIDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 79 lv~e~~-g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
+|||++ ||.|...+...+ ..|++.++..|+.||+.|+.|||+.+|.||||||+|+|.+....+-.+||+|||+|+.-.
T Consensus 136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 999999 999999988554 469999999999999999999999999999999999999877777889999999998654
Q ss_pred CCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC-HHHHHHHHhhcccccc
Q 011988 157 DTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT-KKQKYEKISEKKVSTS 235 (473)
Q Consensus 157 ~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~-~~~~~~~i~~~~~~~~ 235 (473)
.... ..+.+-|+.|.|||++-...|+...|+||+||++|-|++|.+||....... ....-.+|.......+
T Consensus 216 ~~~~--------L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP 287 (400)
T KOG0604|consen 216 EPGD--------LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP 287 (400)
T ss_pred CCcc--------ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC
Confidence 3222 234578999999999998889999999999999999999999997654321 1112223333333222
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
..-+..+++..+++|+.+|..+|.+|.|+.++ +.+.|+
T Consensus 288 -~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~---m~hpwi 325 (400)
T KOG0604|consen 288 -EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEV---MDHPWI 325 (400)
T ss_pred -ChhHhHHHHHHHHHHHHHhcCCchhheeHHHh---hcCchh
Confidence 22345678899999999999999999996655 555554
No 356
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.3e-36 Score=288.95 Aligned_cols=243 Identities=19% Similarity=0.276 Sum_probs=197.2
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+|++.++||.|+||.||++.+..+++.++||.+.... ...+..|+.+++.++| ++|..+..+.......+++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH-PNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC-CCchhhhhhhccCCEEEEEeh
Confidence 5899999999999999999999999999999854322 3346789999999985 455555556666788999999
Q ss_pred cC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 83 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 83 ~~-g~sL~~~l~~~---~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|+ +++|.+++... ...+++..++.++.||+.||.|||+.|++|+||+|+||+++ ..+.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccchhhhccC
Confidence 98 88999988642 35689999999999999999999999999999999999995 5788999999999876543
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.. ....++..|++||.+.+..++.++||||||+++|||++|+.||..... ......+...... .
T Consensus 157 ~~---------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~----~ 220 (256)
T cd08530 157 MA---------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM---QDLRYKVQRGKYP----P 220 (256)
T ss_pred Cc---------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCCC----C
Confidence 11 234678899999999998899999999999999999999999976532 2222222222221 2
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
+...++.++.+++.+||..+|++||++.++++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 221 IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 23357899999999999999999999888754
No 357
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-37 Score=289.39 Aligned_cols=259 Identities=21% Similarity=0.265 Sum_probs=208.5
Q ss_pred ceEEE-eeEeecCceEEEEEEEcCCCcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 8 KFRLG-RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 8 ~y~i~-~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
-|++. +.||+|+|+.|--|....++.+||||++.+.. ...+.+|++++..+++|.+|..+..|+.++..+|+|||-
T Consensus 78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEK 157 (463)
T KOG0607|consen 78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEK 157 (463)
T ss_pred HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEec
Confidence 34443 57999999999999999999999999976653 456889999999999999999998899999999999999
Q ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 84 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
+ ||.|...|.. ...|++.++..+..+|+.||.|||.+||.||||||+|||....+.-.-||||||.+...+.......
T Consensus 158 m~GGplLshI~~-~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s 236 (463)
T KOG0607|consen 158 MRGGPLLSHIQK-RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS 236 (463)
T ss_pred ccCchHHHHHHH-hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC
Confidence 9 8888887763 4569999999999999999999999999999999999999654445568999999987544332222
Q ss_pred ccccccCCCcccCcccccccccc---CC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC------------HHHHHH
Q 011988 163 HIPYRENKNLTGTARYASMNTHL---GI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------------KKQKYE 225 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~---~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~------------~~~~~~ 225 (473)
....-+..+.+|+..|||||+.. +. .|+.+.|+||||||||-||.|.+||.+.-..+ ....++
T Consensus 237 pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFe 316 (463)
T KOG0607|consen 237 PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE 316 (463)
T ss_pred CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHH
Confidence 22222345668999999999754 32 38999999999999999999999998754321 334456
Q ss_pred HHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 226 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 226 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
.|++.+...+- +-+..++.+.+++|..+|..|+.+|.++..+
T Consensus 317 sIQEGkYeFPd-kdWahIS~eakdlisnLlvrda~~rlsa~~v 358 (463)
T KOG0607|consen 317 SIQEGKYEFPD-KDWAHISSEAKDLISNLLVRDAKQRLSAAQV 358 (463)
T ss_pred HHhccCCcCCh-hhhHHhhHHHHHHHHHHHhccHHhhhhhhhc
Confidence 67776664443 3345678999999999999999999886655
No 358
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.4e-35 Score=289.03 Aligned_cols=248 Identities=19% Similarity=0.262 Sum_probs=181.8
Q ss_pred eeEeecCceEEEEEEEcCC--CcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-C
Q 011988 13 RKIGSGSFGEIYLGTNIQT--NEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-G 85 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~--~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g 85 (473)
+.||+|+||.||+|..... ...+++|...... ...+.+|+.+++.++|++++..+. ++......+++|||+ +
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~-~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG-QCVEAIPYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEE-EecCCCccEEEEecCCC
Confidence 3699999999999975433 2356677643322 345788889999998666555554 455667889999999 7
Q ss_pred CCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 86 PSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 86 ~sL~~~l~~~~---~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~Dfg~~~~~~~~~~-- 154 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGDYGIGPSRYKEDY-- 154 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEecccccccccCcchh--
Confidence 89999987432 3467778899999999999999999999999999999994 678899999999864322111
Q ss_pred ccccccCCCcccCccccccccccC-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhc-ccc
Q 011988 163 HIPYRENKNLTGTARYASMNTHLG-------IEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEK-KVS 233 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~-------~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~-~~~ 233 (473)
........|+..|+|||++.+ ..++.++|||||||++|||++ |..||..... ...+..+... ...
T Consensus 155 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~~~~~~~~~~ 228 (268)
T cd05086 155 ---IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD---REVLNHVIKDQQVK 228 (268)
T ss_pred ---hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHhhcccc
Confidence 011234578899999998753 245789999999999999997 6778866432 2233332221 111
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFR 273 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~ 273 (473)
.....+...+++.+.+++..|| .+|++||++++|.+.|.
T Consensus 229 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 229 LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1112333457889999999999 68999999999987763
No 359
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.2e-36 Score=288.58 Aligned_cols=233 Identities=18% Similarity=0.243 Sum_probs=186.8
Q ss_pred EeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
||.|+||.||+|.+..+++.||||++.+.. ...+..|+.+++.+.|.+++. +..+...+...+++|||+ +++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVK-LYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEee-eeeeEEcCCccEEEEecCCCCc
Confidence 699999999999999889999999854322 245788999999998655554 444566778889999997 889
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccc
Q 011988 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167 (473)
Q Consensus 88 L~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~ 167 (473)
|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++........
T Consensus 80 L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~~~~~~~~------- 148 (262)
T cd05572 80 LWTILRD-RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAKKLKSGQK------- 148 (262)
T ss_pred HHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCcccccCcccc-------
Confidence 9999974 34689999999999999999999999999999999999994 678999999999987654321
Q ss_pred cCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHH
Q 011988 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 247 (473)
Q Consensus 168 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 247 (473)
.....|+..|++||.+.+..++.++|||||||++|+|++|..||..... +....+..+....... .....+++++
T Consensus 149 -~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~ 223 (262)
T cd05572 149 -TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-DPMEIYNDILKGNGKL---EFPNYIDKAA 223 (262)
T ss_pred -cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-CHHHHHHHHhccCCCC---CCCcccCHHH
Confidence 1234688999999999888899999999999999999999999987543 2233333333111111 1123457899
Q ss_pred HHHHHHHhcCCCCCCCC
Q 011988 248 ASYFHYCRSLRFDDKPD 264 (473)
Q Consensus 248 ~~li~~cl~~dp~~RPt 264 (473)
.++|.+||..+|++||+
T Consensus 224 ~~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 224 KDLIKQLLRRNPEERLG 240 (262)
T ss_pred HHHHHHHccCChhhCcC
Confidence 99999999999999999
No 360
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.1e-35 Score=290.63 Aligned_cols=251 Identities=21% Similarity=0.219 Sum_probs=195.6
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
|++.+.||+|+||.||+|++..+++.||+|+.... ....+..|+.+++.++|.+ +..+..+.......+++||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPN-IVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCC-HHHHHhhhhcCCceEEEecC
Confidence 67889999999999999999999999999985443 2345678999999998544 44555555666889999999
Q ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 84 LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 84 ~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
++++|.+++......+++..++.++.|++.||.|||++||+||||+|+||+++ +++.++|+|||+++.......
T Consensus 80 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~l~d~g~~~~~~~~~~--- 153 (282)
T cd07829 80 CDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLKLADFGLARAFGIPLR--- 153 (282)
T ss_pred cCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEEEecCCcccccCCCcc---
Confidence 99999999986556799999999999999999999999999999999999994 678999999999986644321
Q ss_pred cccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhh-------------
Q 011988 164 IPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE------------- 229 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~------------- 229 (473)
......++..|+|||.+.+. .++.++|||||||++|||++|..||...........+.....
T Consensus 154 ----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07829 154 ----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKL 229 (282)
T ss_pred ----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccc
Confidence 11234567889999999877 789999999999999999999999976442211111111100
Q ss_pred --------ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 230 --------KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 230 --------~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.............++.++.++|..||..||++||++.++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 230 PDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00011111223345789999999999999999999888753
No 361
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-37 Score=299.64 Aligned_cols=270 Identities=21% Similarity=0.250 Sum_probs=221.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc------hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~------~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
..+|.++..||.|+||.|.+|..+.+.+.+|||++.+... +--..|.++|.....++.+..++.++..-+..|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 4578999999999999999999999999999998655432 2235688888888888888899999999999999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
||||+ ||+|--.++. -++|.+..+..++..|+-||-|||++|||.||||.+|||+ +..+++||+|||+++.-.-.
T Consensus 428 VMEyvnGGDLMyhiQQ-~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQ-VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEEEecCchhhhHHHH-hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccC
Confidence 99999 8888777764 4579999999999999999999999999999999999999 58999999999999864433
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
.. ...+++||+.|+|||++.-++|+..+|+||+||+||||+.|+.||.+.+ ..+.+..|.+..+.
T Consensus 504 ~~-------TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD---E~elF~aI~ehnvs----- 568 (683)
T KOG0696|consen 504 GV-------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDELFQAIMEHNVS----- 568 (683)
T ss_pred Cc-------ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHHccCc-----
Confidence 22 2367899999999999999999999999999999999999999999854 45566666666553
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHH--HHHHHHHHHHHhCCCCCCccccccccccccccCC
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAY--LKRLFRDLFIREGFQFDYVFDWTILKYQQSQVST 301 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~--l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~~~~ 301 (473)
.++.++.|..+++...|.+.|.+|....- -.++-++ .+-.-.||+.+...+.+++.
T Consensus 569 yPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H-------~FFR~iDWek~E~~eiqPPf 626 (683)
T KOG0696|consen 569 YPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREH-------PFFRRIDWEKLERREIQPPF 626 (683)
T ss_pred CcccccHHHHHHHHHHhhcCCccccCCCCccccchhhC-------cchhhccHHHHhhccCCCCC
Confidence 35678899999999999999999964210 0111122 23345799998877776554
No 362
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-38 Score=306.13 Aligned_cols=262 Identities=21% Similarity=0.304 Sum_probs=209.5
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEE--cccCC--------chhHHHHHHHHHHhcCCCCCCeeEEeeE
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--NVKTK--------HPQLQYEAKLYKILQGGTGIPNLRWFGV 72 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~--~~~~~--------~~~l~~E~~il~~L~~~~~i~~~~~~~~ 72 (473)
|.+.++|-++.+||.|||++||+|.|....+.||||+ +.+.- +....+|.+|.+.|.|+.+|..+.+|..
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 5678899999999999999999999999999999998 22221 2336789999999999999999999999
Q ss_pred eCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC--CCcccCCCCCcEEEeeCCCCCcEEEEec
Q 011988 73 EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDF 149 (473)
Q Consensus 73 ~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~--gIvHrDIKP~NILl~~~~~~~~vkL~DF 149 (473)
+.+.+|.|+||| |.+|.-+++ ..+-++++++..|+.||+.||.||.+. .|||-||||.|||+-.+...|.+||+||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLK-QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLK-QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ccccceeeeeecCCCchhHHHH-hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence 999999999999 667777776 456799999999999999999999975 5999999999999987778899999999
Q ss_pred CCcccccCCCCccccccccCCCcccCccccccccccCC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH
Q 011988 150 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGI----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 225 (473)
Q Consensus 150 Gla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~ 225 (473)
|+++...++.........-...+.||.+|++||.|.-. ..+.|+||||+|||+|.++.|+.||...........+.
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 99999887765544444445678899999999998743 26889999999999999999999997633211111111
Q ss_pred HHhhc-cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 226 KISEK-KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 226 ~i~~~-~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
.|... .+.. ...+.++.+..+||++||.+.-++|.+..+|
T Consensus 698 TIlkAtEVqF---P~KPvVsseAkaFIRRCLaYRKeDR~DV~qL 738 (775)
T KOG1151|consen 698 TILKATEVQF---PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQL 738 (775)
T ss_pred chhcceeccC---CCCCccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 11110 0000 0123467899999999999999999885544
No 363
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=308.03 Aligned_cols=241 Identities=21% Similarity=0.323 Sum_probs=201.8
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCCC
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGP 86 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g~ 86 (473)
.+.||+|.||+||-|+++++|+.||||++.+. ...++..|+.||+.+. |++|..+...++..+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~-HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH-HPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC-CCCeeEEEEeecCCceEEEEehhhcc
Confidence 37899999999999999999999999996543 3467899999999997 77888888888999999999999966
Q ss_pred CHHHH-HHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 87 SLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 87 sL~~~-l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++.++ +....+.+++.....++.||+.||.|||.++|||+||||+|||+...+.-.++||||||+|+.+.+...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF----- 722 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF----- 722 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh-----
Confidence 65555 555667899999999999999999999999999999999999998777778999999999998876543
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcH
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPT 245 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~ 245 (473)
....+||+.|+|||+++.+.|.+.-|+||.|||+|--+.|.+||....+ ..++++.....-... -++.+++
T Consensus 723 ---RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNAaFMyPp~----PW~eis~ 793 (888)
T KOG4236|consen 723 ---RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNAAFMYPPN----PWSEISP 793 (888)
T ss_pred ---hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hhHHhhccccccCCC----chhhcCH
Confidence 2467999999999999999999999999999999999999999976432 233333322222222 2356789
Q ss_pred HHHHHHHHHhcCCCCCCCCHHH
Q 011988 246 EFASYFHYCRSLRFDDKPDYAY 267 (473)
Q Consensus 246 ~l~~li~~cl~~dp~~RPt~~~ 267 (473)
+..+||..+|+..-.+|-+.+.
T Consensus 794 ~AidlIn~LLqVkm~kRysvdk 815 (888)
T KOG4236|consen 794 EAIDLINNLLQVKMRKRYSVDK 815 (888)
T ss_pred HHHHHHHHHHHHHHHHhcchHh
Confidence 9999999999999999977543
No 364
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.6e-35 Score=297.43 Aligned_cols=251 Identities=15% Similarity=0.210 Sum_probs=183.6
Q ss_pred eeEeec--CceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 13 RKIGSG--SFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 13 ~~LG~G--~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
..||.| +||+||++++..+++.||||+..... ...+.+|+.+++.++|++ |..+..++..+...+++|||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~n-iv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPN-IMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC-cceEeeeEecCCceEEEEeccc
Confidence 456666 99999999999999999999954332 244778888888888655 555555666778889999998
Q ss_pred CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++ ..+.++|+||+.+...........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHHHhhhhccCcccc
Confidence 67999998753 34589999999999999999999999999999999999995 678899999987654332221111
Q ss_pred cccccCCCcccCccccccccccCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccc--------
Q 011988 164 IPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVS-------- 233 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-------- 233 (473)
..+.......++..|+|||++.+. .++.++|||||||++|||++|..||.+..... .....+......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFP 237 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccc
Confidence 111111223456789999999874 47899999999999999999999997643211 111111100000
Q ss_pred ---------------------------------ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 234 ---------------------------------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 234 ---------------------------------~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.........+++++.+||..||..||++|||+.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l 306 (328)
T cd08226 238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306 (328)
T ss_pred hhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000011123567899999999999999999988873
No 365
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=9.1e-36 Score=287.61 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=195.5
Q ss_pred EeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
||.|+||.||+|++..+++.|++|++.... ...+..|+++++.+.|.+++ .+..+.......+++||++ +++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVV-KLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchh-HHHHheecCcEEEEEEecCCCCc
Confidence 689999999999998899999999864432 34578899999999855544 4555566778889999999 779
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc-cccc
Q 011988 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ-HIPY 166 (473)
Q Consensus 88 L~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~-~~p~ 166 (473)
|.+++.... .+++..++.++.||+.||.|||++||+|+||+|+||+++ .++.++|+|||++.......... ....
T Consensus 80 L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 80 LASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEecccchhcccCccccccccc
Confidence 999998544 799999999999999999999999999999999999994 77899999999987654321100 0000
Q ss_pred ccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHH
Q 011988 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 246 (473)
Q Consensus 167 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 246 (473)
.......++..|++||.+.+..++.++|||||||++|+|++|..||.... ....+..+........ .. ..++..
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~--~~-~~~~~~ 229 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET---PEEIFQNILNGKIEWP--ED-VEVSDE 229 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCcCCC--cc-ccCCHH
Confidence 11234568889999999998889999999999999999999999997643 2333333332221111 11 124899
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 247 FASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 247 l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
+.+++..||+.+|++||++..+.++|++-|
T Consensus 230 ~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~ 259 (265)
T cd05579 230 AIDLISKLLVPDPEKRLGAKSIEEIKNHPF 259 (265)
T ss_pred HHHHHHHHhcCCHhhcCCCccHHHHhcCcc
Confidence 999999999999999999988887777654
No 366
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=305.44 Aligned_cols=259 Identities=17% Similarity=0.266 Sum_probs=208.8
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
+...+.++||+|-||+|.+|+- ..+..||+|.+.... ...|.+|+++|.+|+ +++|..+...+..++..++++|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchHHHHH
Confidence 4567899999999999999984 456899999854433 356899999999997 5556666677788888999999
Q ss_pred cC-CCCHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 83 LL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~-ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
|+ .|+|.+++..+..+ +..+....|+.||+.||+||.+.+||||||.+.|+|+ +.++++||+|||+++.+-....
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccccccCCc
Confidence 99 89999999865433 3556677899999999999999999999999999999 5889999999999996554433
Q ss_pred ccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR--GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt--G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
|+.....+-..+|||+|.+..++++.++|||+||++|||+++ ...||..+......+....+....-......
T Consensus 693 -----y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~ 767 (807)
T KOG1094|consen 693 -----YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLS 767 (807)
T ss_pred -----eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceecc
Confidence 233344566789999999999999999999999999999865 8899988765444443333333333333333
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
.+.-||.++.++|..||..|-.+||+|++|...|++.
T Consensus 768 ~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 768 RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 3467899999999999999999999999998888764
No 367
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.1e-35 Score=291.87 Aligned_cols=242 Identities=19% Similarity=0.269 Sum_probs=190.7
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CC
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GP 86 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~ 86 (473)
...+||+|+||.||++.+..+++.||||..... ....+..|+.+++.+.|+ ++..+..++...+..+++|||+ ++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-NVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCc-chhheeeEEEeCCEEEEEEecCCCC
Confidence 346799999999999999999999999985322 234577899999999865 4445555667788999999999 77
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccccc
Q 011988 87 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166 (473)
Q Consensus 87 sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~ 166 (473)
+|.+++. ...+++..++.++.||+.||+|||++||+|+||||+||+++ .++.++|+|||++........
T Consensus 103 ~L~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~dfg~~~~~~~~~~------ 171 (292)
T cd06657 103 ALTDIVT--HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVP------ 171 (292)
T ss_pred cHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEcccccceecccccc------
Confidence 8988775 34689999999999999999999999999999999999994 678899999999876543221
Q ss_pred ccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHH
Q 011988 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTE 246 (473)
Q Consensus 167 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~ 246 (473)
......|+..|++||.+.+..++.++|||||||++|+|++|..||.+... ......+... ...... ....++..
T Consensus 172 -~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---~~~~~~~~~~-~~~~~~-~~~~~~~~ 245 (292)
T cd06657 172 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAMKMIRDN-LPPKLK-NLHKVSPS 245 (292)
T ss_pred -cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhh-CCcccC-CcccCCHH
Confidence 11335688999999999888899999999999999999999999976432 2222222111 111111 12356889
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 247 FASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 247 l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
+.+++.+||..+|.+||++.++++
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhc
Confidence 999999999999999999888744
No 368
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=6.8e-35 Score=318.78 Aligned_cols=144 Identities=24% Similarity=0.430 Sum_probs=124.5
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.++|.++++||.|+||.||+|.+..+++.||||++.... ...+..|+.++..++|++++ .+..++......||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv-~~~~~~~~~~~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIV-HLYYSLQSANNVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcC-eEEEEEEECCEEEE
Confidence 378999999999999999999999999999999865432 24578899999988865544 55566677888999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
||||+ +++|.+++.. ...+++..++.|+.||+.||.|||.+|||||||||+||||+ ..+.+||+|||+++.
T Consensus 82 VmEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFGls~~ 153 (669)
T cd05610 82 VMEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGHIKLTDFGLSKV 153 (669)
T ss_pred EEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCCEEEEeCCCCcc
Confidence 99999 8899999874 34689999999999999999999999999999999999994 678999999999863
No 369
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=311.50 Aligned_cols=248 Identities=21% Similarity=0.259 Sum_probs=197.8
Q ss_pred CceEEEeeEeecCceEEEEEEEcCC-C--cEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQT-N--EEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~-~--~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
++.++.++||+|.||.|+.|.|... | ..||||.+... ...+|.+|+.+|..|+|.+.|..+..+ .+ ....+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvV-l~-qp~mM 187 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVV-LD-QPAMM 187 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeee-cc-chhhH
Confidence 4567789999999999999998753 3 36899985433 345799999999999976665544333 33 66789
Q ss_pred EEecC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 80 VIDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~-~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
|||++ .|+|.+.+.. ....|.......++.||+.||.||.++++|||||-..|+|+. ....||||||||.+.+..
T Consensus 188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLMRALGE 264 (1039)
T ss_pred HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccceeccCC
Confidence 99999 8899999886 445688899999999999999999999999999999999995 678999999999998866
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
.... |.......-...|+|||.+....++.++|||+|||+||||++ |..||.+.... +.+++|......
T Consensus 265 ned~----Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~---qIL~~iD~~erL--- 334 (1039)
T KOG0199|consen 265 NEDM----YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI---QILKNIDAGERL--- 334 (1039)
T ss_pred CCcc----eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH---HHHHhccccccC---
Confidence 4431 111122233567999999999999999999999999999999 99999997654 333443322211
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
.-.+.||+.+++++..||..+|.+||+|..|++
T Consensus 335 -pRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 335 -PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred -CCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 123578999999999999999999999999973
No 370
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.3e-35 Score=287.26 Aligned_cols=244 Identities=23% Similarity=0.279 Sum_probs=190.7
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc--------CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK--------TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~--------~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
+|.+.++||.|+||.||++.+...+..+++|+... ....++..|+.+++.++|++++..+ .+.......++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFH-ASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHH-HHHhcCCceEE
Confidence 69999999999999999999887777676666322 1223456788999999866655544 44456667899
Q ss_pred EEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 80 VIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
+|||+ +++|.+++.. ....+++..++.++.|++.||.|||++||+|+||||+||+++ .+.++|+|||+++.+
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeec
Confidence 99998 7899988863 245699999999999999999999999999999999999994 356999999999776
Q ss_pred cCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcccccc
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
..... ......|+..|+|||.+.+..++.++||||||+++|+|++|..||.... .......+.....
T Consensus 156 ~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~--- 222 (260)
T cd08222 156 MGSCD-------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN---FLSVVLRIVEGPT--- 222 (260)
T ss_pred CCCcc-------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHHcCCC---
Confidence 44322 1134568899999999988889999999999999999999999996532 2222333322211
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..+...++.++.++|..||..+|++||++.++.+
T Consensus 223 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 223 -PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 1123467889999999999999999999888753
No 371
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.5e-36 Score=283.16 Aligned_cols=267 Identities=21% Similarity=0.260 Sum_probs=204.2
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCC----cEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN----EEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~----~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
...|+++++||+|.||.||+|....++ +.+|||.+..++ .....+|+.+++.|+|++.|..+..|-..+..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 357999999999999999999765543 368999855442 34578999999999999888887777666888
Q ss_pred EEEEEecCCCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEee-CCCCCcEEEEecCC
Q 011988 77 NVLVIDLLGPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL-GRRANQVYIIDFGL 151 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~----~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~-~~~~~~vkL~DFGl 151 (473)
.++++||...+|.++++... +.++...+..|+.||+.|+.|||++=|+||||||.|||+.- +...|.|||+|||+
T Consensus 103 v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 103 VWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred EEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence 99999999999999998653 35899999999999999999999999999999999999963 23458999999999
Q ss_pred cccccCCCCccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCC------HHHHH
Q 011988 152 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGT------KKQKY 224 (473)
Q Consensus 152 a~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~------~~~~~ 224 (473)
|+.+.+.-. |.......+-|..|.|||.++|.. |+.+.|||++|||+.||++-++-|.+..... ....+
T Consensus 183 aR~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 183 ARLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred HHHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 999876532 334456678899999999999875 9999999999999999999888886532211 11122
Q ss_pred HHHhh---cc----------cccc---HHHH----------------hcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 225 EKISE---KK----------VSTS---IEAL----------------CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 225 ~~i~~---~~----------~~~~---~~~l----------------~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
.+|.+ .. ++.. +..+ .+.-++...+|+.++|.+||.+|.|+++. |
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA---l 335 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA---L 335 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH---h
Confidence 22211 00 0000 0000 01124457899999999999999997765 5
Q ss_pred HHHHHHh
Q 011988 273 RDLFIRE 279 (473)
Q Consensus 273 ~~l~~~~ 279 (473)
++.+-.+
T Consensus 336 eh~yF~~ 342 (438)
T KOG0666|consen 336 EHPYFTE 342 (438)
T ss_pred ccccccc
Confidence 5555433
No 372
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=309.65 Aligned_cols=249 Identities=20% Similarity=0.364 Sum_probs=207.2
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEE--cccCCchhHHHHHHHHHHhcCCCCCCeeEEeeE-----eCCeE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--NVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV-----EGDYN 77 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~--~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~-----~~~~~ 77 (473)
-.+.|+|.+.||.|.+|.||+++++.+++.+|+|+ ...+...+++.|.++|+.+.+|++++.+++++. .++..
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence 35779999999999999999999999999999998 445566778999999999999999998877765 35678
Q ss_pred EEEEecC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 78 VLVIDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
||||||| |||.-|+++.. +..+.+..+..|++.++.||.+||.+.+||||||-.|||++ .++.|||+|||++..+
T Consensus 97 WLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQL 173 (953)
T ss_pred EEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---ccCcEEEeeeeeeeee
Confidence 9999999 88999999743 56799999999999999999999999999999999999996 8899999999999877
Q ss_pred cCCCCccccccccCCCcccCccccccccccCCC-----CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhc
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLGIE-----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 230 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~ 230 (473)
...-. ...+++||+.|||||++...+ |+.++|+||||++..||..|.+|+.++.+.- .+..|...
T Consensus 174 dsT~g-------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---aLF~IpRN 243 (953)
T KOG0587|consen 174 DSTVG-------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---ALFLIPRN 243 (953)
T ss_pred ecccc-------cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---hhccCCCC
Confidence 55432 236789999999999998653 6889999999999999999999998876521 12222222
Q ss_pred cccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 231 KVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 231 ~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
..+.. .-++.+..+|.++|..||.+|.+.||...++
T Consensus 244 PPPkL--krp~kWs~~FndFIs~cL~Kd~e~RP~~~~l 279 (953)
T KOG0587|consen 244 PPPKL--KRPKKWSKKFNDFISTCLVKDYEQRPSTEEL 279 (953)
T ss_pred CCccc--cchhhHHHHHHHHHHHHHhhccccCcchhhh
Confidence 21111 1134567899999999999999999996655
No 373
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.9e-35 Score=290.81 Aligned_cols=251 Identities=18% Similarity=0.233 Sum_probs=181.9
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
+.+.+|. +|.||++++..+++.||||++... ....+..|+.+++.++|.+++.. ..+....+..+++|||+
T Consensus 6 i~~~~~~--~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~-~~~~~~~~~~~~~~e~~~ 82 (314)
T cd08216 6 IGKCFED--LMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPY-VTSFIVDSELYVVSPLMA 82 (314)
T ss_pred hhHhhcC--CceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhh-hheeecCCeEEEEEeccC
Confidence 3444444 455566666679999999985433 23458899999999996655554 44556777889999999
Q ss_pred CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 g~sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++... ...+++..+..++.||+.||+|||+++|+||||||+|||++ .++.+||+|||.+..+........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceeecccccccc
Confidence 68999998743 34689999999999999999999999999999999999995 678999999999976654322111
Q ss_pred cccccCCCcccCccccccccccCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc----------
Q 011988 164 IPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK---------- 231 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~---------- 231 (473)
..........++..|+|||++.+. .++.++|||||||++|||++|..||...... .....++....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCccccccCchh
Confidence 111222345678899999998763 4789999999999999999999999864321 11111111000
Q ss_pred -----c-------------cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 -----V-------------STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 -----~-------------~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
. ..........++.++.+++..||..||++||++.+|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll 293 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLL 293 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHh
Confidence 0 0000011123356889999999999999999987774
No 374
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=286.82 Aligned_cols=250 Identities=18% Similarity=0.287 Sum_probs=199.6
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc----CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
+.+-+..||.|+||+|++-.++.+|+..|||.+.. ....++..|.+...+-..+++|+.+++........||.||+
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 34456789999999999999999999999998433 23456888888888888888887776665566667999999
Q ss_pred CCCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 84 LGPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 84 ~g~sL~~~l~~~----~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
+.-||..+.+.. +..+++..+-.|....+.||.||-. ..||||||||+|||+ +..|.|||||||++-.+.++
T Consensus 145 Md~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 145 MDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVDS 221 (361)
T ss_pred HhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHHHH
Confidence 999998886532 4569999999999999999999985 689999999999999 58899999999999877665
Q ss_pred CCccccccccCCCcccCccccccccccCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
... +.-.|...|||||.+... .|+-++||||||++|||+.||.+||.+... ..+++..+.....+...
T Consensus 222 iAk--------T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~ 291 (361)
T KOG1006|consen 222 IAK--------TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILL 291 (361)
T ss_pred HHh--------hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeec
Confidence 332 234789999999998743 489999999999999999999999987543 34444444443332221
Q ss_pred -HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 237 -EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 237 -~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..-+-.++..+..+|..||.+|-.+||.|.+|++
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1223457889999999999999999999998864
No 375
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=258.33 Aligned_cols=251 Identities=21% Similarity=0.247 Sum_probs=200.6
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.+|.-.++||+|.||+||+|++..+++.||+|...-.+ .....+|+-+++.|+|.+++..+ ..-..+...-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~-dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH-DVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehh-hhhccCceeEEeH
Confidence 35778899999999999999999999999999733222 33578999999999976655544 4445566778999
Q ss_pred ecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 82 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 82 e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|||..+|..+++.+++.++.+.+..++.|++.||.|+|+++++||||||+|.|| +.++.+||+|||+|+.+.-
T Consensus 81 e~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgi---- 153 (292)
T KOG0662|consen 81 EFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGI---- 153 (292)
T ss_pred HHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCC----
Confidence 999999999999999999999999999999999999999999999999999999 5899999999999987653
Q ss_pred cccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhcccc---c--
Q 011988 162 QHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVS---T-- 234 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~---~-- 234 (473)
|.+.-...+-|..|.+|.++.|.. |+...|+||.|||+.|+.. |.+.|.+.+..+...++.+....... +
T Consensus 154 ---pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 154 ---PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred ---ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcc
Confidence 333344557799999999999876 8999999999999999997 88888886555444444443321111 1
Q ss_pred ----------------cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 235 ----------------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 235 ----------------~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
....+.+.+...-+++++.+|.-+|..|.+++..
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaa 280 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAA 280 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHH
Confidence 1112223334455789999999999999998765
No 376
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=301.78 Aligned_cols=241 Identities=20% Similarity=0.237 Sum_probs=202.0
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
..+.|.+...+|.|+|+.|-.+.+..+++..++|++.+. ..+..+|+.++....+|+++..+.....++...++|||++
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc-ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 467899999999999999999999999999999997666 4456788889998998999999988889999999999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
|+-|.+.+.. . +....++..|+.+|+.|+.|||++|||||||||+|||+. +..++++|+|||.++.....-
T Consensus 399 ~g~ell~ri~~-~-~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~~---- 470 (612)
T KOG0603|consen 399 DGGELLRRIRS-K-PEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERSC---- 470 (612)
T ss_pred cccHHHHHHHh-c-chhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchhh----
Confidence 5555555442 2 333377888999999999999999999999999999995 478899999999998776541
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGY 243 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 243 (473)
.+.+-|..|.|||+....+|++++||||||++||+||+|+.||..-... .+.+.++...+.. ..+
T Consensus 471 ------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i~~~~~s-------~~v 535 (612)
T KOG0603|consen 471 ------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRIQMPKFS-------ECV 535 (612)
T ss_pred ------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhhcCCccc-------ccc
Confidence 1235688999999999999999999999999999999999999875543 3444444443332 467
Q ss_pred cHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 244 PTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 244 p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
+.+.++|+.+||+.||.+||++.++.
T Consensus 536 S~~AKdLl~~LL~~dP~~Rl~~~~i~ 561 (612)
T KOG0603|consen 536 SDEAKDLLQQLLQVDPALRLGADEIG 561 (612)
T ss_pred CHHHHHHHHHhccCChhhCcChhhhc
Confidence 89999999999999999999988873
No 377
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.3e-34 Score=277.83 Aligned_cols=233 Identities=23% Similarity=0.299 Sum_probs=188.7
Q ss_pred EeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCC
Q 011988 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPS 87 (473)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~s 87 (473)
||.|+||.||++.+..+++.||+|++.... ...+..|+.+++.+.|.+.+ .+......+...+++||++ +++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIV-KLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHH-HHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999998889999999854432 23578899999999855544 4445556778899999999 999
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccc
Q 011988 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYR 167 (473)
Q Consensus 88 L~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~ 167 (473)
|.+++... ..+++..++.++.||+.||.|||+.+++|+||||+||+++ ..+.++|+|||++........
T Consensus 80 L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~~~~~~~~------- 148 (250)
T cd05123 80 LFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKELSSEGS------- 148 (250)
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCcceecccCCC-------
Confidence 99999743 4689999999999999999999999999999999999995 678899999999987654321
Q ss_pred cCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHH
Q 011988 168 ENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 247 (473)
Q Consensus 168 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 247 (473)
......++..|++||.+.+...+.++|||||||++|+|++|..||..... ...+..+..... .+...++.++
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~l 220 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILKDPL-----RFPEFLSPEA 220 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhcCCC-----CCCCCCCHHH
Confidence 11345788999999999988889999999999999999999999965432 233333332111 2334568999
Q ss_pred HHHHHHHhcCCCCCCCCHHH
Q 011988 248 ASYFHYCRSLRFDDKPDYAY 267 (473)
Q Consensus 248 ~~li~~cl~~dp~~RPt~~~ 267 (473)
.+++.+||..||++||++.+
T Consensus 221 ~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 221 RDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHhcCCHhhCCCccc
Confidence 99999999999999999855
No 378
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-36 Score=309.65 Aligned_cols=256 Identities=16% Similarity=0.239 Sum_probs=211.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCC---cEEEEEEccc----CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTN---EEVAIKLNVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~---~~vAiK~~~~----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
....|.+.||.|.||+||+|+.+..+ ..||||.++. ....+|+.|+.||-++.|+| |..+..+.......+|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPN-IIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPN-IIRLEGVVTKSKPVMI 707 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCc-EEEEEEEEecCceeEE
Confidence 44678999999999999999987665 4699998543 33556999999999999555 5567777788889999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
+.||| +++|..+|....+.|+..++..+++.|+.|+.||-+.++|||||...|||+ +.+-.+|++|||+++.+.++
T Consensus 708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeecccC
Confidence 99999 999999999888889999999999999999999999999999999999999 57788999999999987665
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
... +.....-.-..+|.|||.+.-..++.++||||||++|||.+. |..||.++.+. +.+..|.+.-..++
T Consensus 785 ~~~----~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ---dVIkaIe~gyRLPp-- 855 (996)
T KOG0196|consen 785 PEA----AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVIKAIEQGYRLPP-- 855 (996)
T ss_pred CCc----cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH---HHHHHHHhccCCCC--
Confidence 411 111111122478999999999999999999999999999887 99999887653 33333333222211
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
+-+||..|..||..||++|-.+||.|.+|+..|++++.
T Consensus 856 --PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 856 --PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred --CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 24789999999999999999999999999999999874
No 379
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-36 Score=283.35 Aligned_cols=273 Identities=20% Similarity=0.276 Sum_probs=217.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.++|.+++.||.|+|..|.+++.+++.+.+|+|++++.. ..=.+.|..+..+..+++.+.-++.++......++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 478999999999999999999999999999999854432 22366788888888888888888889998899999
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
|.||. |++|--.++ ..++++++.+..+...|+.||.|||++|||.||||.+|+|+ +..+++||+|+|+++.-..+
T Consensus 329 vieyv~ggdlmfhmq-rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEecCcceeeehh-hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCC
Confidence 99999 778765555 45689999999999999999999999999999999999999 58999999999999865443
Q ss_pred CCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-----CCCHHHHHHHHhhcccc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK-----AGTKKQKYEKISEKKVS 233 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~-----~~~~~~~~~~i~~~~~~ 233 (473)
.. ...+++||+.|.|||++.|.+|+..+|.|+|||+++||+.|+.||.-.. ..+....++.|.++.+.
T Consensus 405 gd-------~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir 477 (593)
T KOG0695|consen 405 GD-------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR 477 (593)
T ss_pred Cc-------ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc
Confidence 32 2368999999999999999999999999999999999999999996321 12333445555555543
Q ss_pred ccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCccccccccccccc
Q 011988 234 TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ 298 (473)
Q Consensus 234 ~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~ 298 (473)
. ++.++-....+++..|++||.+|....- ..-|.++ .+.++....||+.+..+|.-
T Consensus 478 i-----prslsvkas~vlkgflnkdp~erlgc~~-~~g~~di---k~h~ffr~idwd~leqk~v~ 533 (593)
T KOG0695|consen 478 I-----PRSLSVKASHVLKGFLNKDPKERLGCRP-QTGFSDI---KSHAFFRSIDWDLLEQKQVL 533 (593)
T ss_pred c-----cceeehhhHHHHHHhhcCCcHHhcCCCc-ccchhhh---hcchhhhhCCHHHHhhcccC
Confidence 3 4566777889999999999999854210 0012222 22334446799998765443
No 380
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=300.19 Aligned_cols=266 Identities=19% Similarity=0.280 Sum_probs=211.6
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
.+++++..||-||||.|-++........+|+|++.+.. ...+..|-+||..+. .+.|+.++-.+.+..+.|+.
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhh
Confidence 46778889999999999999865555558888754432 233667889999888 55666665566788899999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
||-| ||.|+.++.. .+.|+..++..++..+++|++|||++|||.|||||+|+|+ +..|-+||.|||+|+.+....
T Consensus 499 mEaClGGElWTiLrd-Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 499 MEACLGGELWTILRD-RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HHhhcCchhhhhhhh-cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCC
Confidence 9988 9999999984 5579999999999999999999999999999999999999 588999999999999887654
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEAL 239 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 239 (473)
. .-+++||+.|.|||++++...+.++|.||||+++|||++|.+||.+.+.. ..|..|.... ..-.+
T Consensus 575 K--------TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm---ktYn~ILkGi---d~i~~ 640 (732)
T KOG0614|consen 575 K--------TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM---KTYNLILKGI---DKIEF 640 (732)
T ss_pred c--------eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH---HHHHHHHhhh---hhhhc
Confidence 3 34789999999999999999999999999999999999999999986553 3333332211 12234
Q ss_pred hcCCcHHHHHHHHHHhcCCCCCCCCH--HHHHHHHHHHHHHhCCCCCCccccccccccccc
Q 011988 240 CRGYPTEFASYFHYCRSLRFDDKPDY--AYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ 298 (473)
Q Consensus 240 ~~~~p~~l~~li~~cl~~dp~~RPt~--~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~ 298 (473)
++.++....++|..+...+|.+|..+ ..|.++-.+ .|..-|||+.++..+.+
T Consensus 641 Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH-------~Wf~gfdweglr~~~L~ 694 (732)
T KOG0614|consen 641 PRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH-------RWFEGFDWEGLRSRTLP 694 (732)
T ss_pred ccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh-------hhhhcCChhhhhhccCC
Confidence 56778899999999999999999762 233333222 34567999999866544
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-36 Score=279.97 Aligned_cols=258 Identities=20% Similarity=0.243 Sum_probs=198.9
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEc-c----cCCchhHHHHHHHHHHhcCCCCCCeeEEeeE-------e
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-V----KTKHPQLQYEAKLYKILQGGTGIPNLRWFGV-------E 73 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~-~----~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~-------~ 73 (473)
.+.|+-..+||+|.||+||+|+...+|+.||+|+. . ..-.....+|+++|..|+|.+.+..+..+.. +
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 46688889999999999999999999999999862 1 1123346799999999998877666543321 2
Q ss_pred CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
...+++||++|..+|..++.....+|+..++..++.+++.||.|+|...|+|||+||+|+||+ .++.+||+|||+++
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt---~dgilklADFGlar 172 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT---KDGILKLADFGLAR 172 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc---CCceEEeecccccc
Confidence 334799999999999999987767899999999999999999999999999999999999994 78999999999998
Q ss_pred cccCCCCccccccccCCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-
Q 011988 154 RYRDTATHQHIPYRENKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK- 231 (473)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~- 231 (473)
.+..........| ...+-|..|.+||.++|. +|+++.|||..|||+.||++|.+-|++.........+..+....
T Consensus 173 ~fs~~~n~~kpry---tnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 173 AFSTSKNVVKPRY---TNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred ceecccccCCCCc---ccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 8776544332212 344669999999999986 48999999999999999999999998855433222222221111
Q ss_pred --ccccH----------------------HHHhc--CCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 232 --VSTSI----------------------EALCR--GYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 232 --~~~~~----------------------~~l~~--~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
..+.. +...+ .-.++..+|+.+++.+||.+|++++++.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 00000 00000 1135778999999999999999998873
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.9e-34 Score=308.55 Aligned_cols=251 Identities=17% Similarity=0.184 Sum_probs=167.0
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCC----CcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEE----e-eEeCCe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQT----NEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRW----F-GVEGDY 76 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~----~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~----~-~~~~~~ 76 (473)
.++|.+.++||+|+||.||+|++..+ +..||||........+...+..+.. ..+......+.. . ......
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRR-ACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHh-hchhhHHHHHHhhhcccccccCCc
Confidence 46899999999999999999999888 8999999854433222221111111 111111111111 1 245567
Q ss_pred EEEEEecC-CCCHHHHHHHcCCC-------------------CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEe
Q 011988 77 NVLVIDLL-GPSLEDLFNFCSRK-------------------LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMG 136 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~~~-------------------ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~ 136 (473)
.+++|||+ +++|.+++...... .....+..|+.||+.||.|||++|||||||||+|||++
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~ 289 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS 289 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe
Confidence 89999999 77899988643211 12344678999999999999999999999999999995
Q ss_pred eCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCC----------------------CCchhh
Q 011988 137 LGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE----------------------QSRRDD 194 (473)
Q Consensus 137 ~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~----------------------~s~ksD 194 (473)
++.+.+||+|||+|+.+...... ....+.||+.|+|||.+.... ++.++|
T Consensus 290 --~~~~~~KL~DFGlA~~l~~~~~~------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 290 --EGSGSFKIIDLGAAADLRVGINY------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred --CCCCcEEEEeCCCcccccccccc------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 34578999999999865432211 124568899999999764322 344679
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc-------------ccccHH---HHhcCCcHHHHHHHHHHhcCC
Q 011988 195 LESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK-------------VSTSIE---ALCRGYPTEFASYFHYCRSLR 258 (473)
Q Consensus 195 VwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~-------------~~~~~~---~l~~~~p~~l~~li~~cl~~d 258 (473)
|||||||||||+++.+++... ..+....+.... ...... .+........++||..||.+|
T Consensus 362 VwSlGviL~el~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSN----LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchH----HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 999999999999987775431 111111111100 000000 011112334568999999999
Q ss_pred CCCCCCHHHHH
Q 011988 259 FDDKPDYAYLK 269 (473)
Q Consensus 259 p~~RPt~~~l~ 269 (473)
|++||++.+++
T Consensus 438 P~kR~ta~e~L 448 (566)
T PLN03225 438 GRQRISAKAAL 448 (566)
T ss_pred cccCCCHHHHh
Confidence 99999987774
No 383
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4e-35 Score=316.69 Aligned_cols=256 Identities=21% Similarity=0.225 Sum_probs=186.3
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEe----------
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWF---------- 70 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~---------- 70 (473)
..++|+.++.||+||||.||+++++-+|+.||||.+.-. ....+.+|+.+|.+|+|+|.|.++..+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 457889999999999999999999999999999985443 233478999999999987777654200
Q ss_pred -----------------------------------------------e--------------------------E-----
Q 011988 71 -----------------------------------------------G--------------------------V----- 72 (473)
Q Consensus 71 -----------------------------------------------~--------------------------~----- 72 (473)
. .
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0 0
Q ss_pred -----------------------e-------CCeEEEEEecCCCCHHHHHHHcCCCC-CHHHHHHHHHHHHHHHHHHHhC
Q 011988 73 -----------------------E-------GDYNVLVIDLLGPSLEDLFNFCSRKL-SLKTVLMLADQMINRVEFVHSK 121 (473)
Q Consensus 73 -----------------------~-------~~~~~lv~e~~g~sL~~~l~~~~~~l-s~~~~~~i~~qi~~aL~yLH~~ 121 (473)
+ ..+.||-||||..+|...+...+... .....|+++.||++||.|+|+.
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 0 02458899999665555544333322 4788999999999999999999
Q ss_pred CCcccCCCCCcEEEeeCCCCCcEEEEecCCccccc------CC--C--Cccc-cccccCCCcccCccccccccccCCC--
Q 011988 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYR------DT--A--THQH-IPYRENKNLTGTARYASMNTHLGIE-- 188 (473)
Q Consensus 122 gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~------~~--~--~~~~-~p~~~~~~~~Gt~~Y~APE~~~~~~-- 188 (473)
|||||||||.||++ +..+.|||+|||+|+... +. . +... -..-..+..+||..|+|||++.+..
T Consensus 717 giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 717 GIIHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred ceeeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 99999999999999 488999999999998722 00 0 0000 0111345679999999999998765
Q ss_pred -CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHH
Q 011988 189 -QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAY 267 (473)
Q Consensus 189 -~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~ 267 (473)
|+.|+|+|||||||+||+. ||.. ..+....+..+....++.+ ..+...--+.-..+|+.|++.||.+|||+.+
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~T--sMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e 867 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGT--SMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPTATE 867 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCc--hHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence 9999999999999999984 5642 2223333333333332222 2222222245678999999999999999988
Q ss_pred HH
Q 011988 268 LK 269 (473)
Q Consensus 268 l~ 269 (473)
|+
T Consensus 868 LL 869 (1351)
T KOG1035|consen 868 LL 869 (1351)
T ss_pred Hh
Confidence 75
No 384
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-34 Score=281.12 Aligned_cols=265 Identities=22% Similarity=0.295 Sum_probs=209.0
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHH--hcCCCCCCeeEEeeEeC---CeE
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKI--LQGGTGIPNLRWFGVEG---DYN 77 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~--L~~~~~i~~~~~~~~~~---~~~ 77 (473)
..|..+..+.+.||+|.||+||+|.+ .|+.||||++...+...+.+|.+|++. |+|.|++.++..=..+. ...
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred HhhhheeEEEEEecCccccceeeccc--cCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 45788899999999999999999986 589999999988888889999999985 57666665543221111 346
Q ss_pred EEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh--------CCCcccCCCCCcEEEeeCCCCCcEEEEe
Q 011988 78 VLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS--------KSFLHRDIKPDNFLMGLGRRANQVYIID 148 (473)
Q Consensus 78 ~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~--------~gIvHrDIKP~NILl~~~~~~~~vkL~D 148 (473)
+||.+|- .|||.|++.. ..++.+..++++..++.||++||- -.|.|||||..|||+ .+++.+.|+|
T Consensus 285 wLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~C~IAD 359 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIAD 359 (513)
T ss_pred EEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCcEEEee
Confidence 8999998 8999999984 679999999999999999999994 249999999999999 5899999999
Q ss_pred cCCcccccCCCCccccccccCCCcccCccccccccccCCC----C--CchhhHHHHHHHHHHHHc----------CCCCC
Q 011988 149 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE----Q--SRRDDLESLGYVLMYFLR----------GSLPW 212 (473)
Q Consensus 149 FGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~----~--s~ksDVwSlGviL~ellt----------G~~Pf 212 (473)
||||-..........++ .+..+||.+|||||++...- + -..+||||||.||||++. -++||
T Consensus 360 LGLAv~h~~~t~~idi~---~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIP---PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred ceeeEEecccCCcccCC---CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 99998877654433333 45679999999999987532 1 246899999999999985 26788
Q ss_pred CCCCCCC--HHHHHHHHhhccccccHHHHhcCCc--HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 213 QGLKAGT--KKQKYEKISEKKVSTSIEALCRGYP--TEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 213 ~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~p--~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
.+..+.+ ..+..+.+...+..+.++......| ..+.++|+.||..+|.-|-|+--|++.|.++.+
T Consensus 437 yd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 437 YDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 7765433 2223333344455555555554443 468899999999999999999999999998873
No 385
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=279.19 Aligned_cols=131 Identities=28% Similarity=0.542 Sum_probs=110.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc--hhHHHHHHHHHHhcCCC-------C-CCeeEEe---e
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH--PQLQYEAKLYKILQGGT-------G-IPNLRWF---G 71 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~--~~l~~E~~il~~L~~~~-------~-i~~~~~~---~ 71 (473)
.+++|.+.++||.|.|++||+|.|.++.+.||+|+.+...+ +....|+++|+.+..+. . |..+..| +
T Consensus 76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 35899999999999999999999999999999999554432 34678999999986432 2 3333444 4
Q ss_pred EeCCeEEEEEecCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEE
Q 011988 72 VEGDYNVLVIDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLM 135 (473)
Q Consensus 72 ~~~~~~~lv~e~~g~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl 135 (473)
..+.+.|||+|++|.+|..+|.+++ +.++...+..|+.||+.||.|||. .||||-||||+|||+
T Consensus 156 pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 5678899999999999999998664 459999999999999999999996 799999999999999
No 386
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=304.14 Aligned_cols=256 Identities=21% Similarity=0.335 Sum_probs=204.5
Q ss_pred ceEEEeeEeecCceEEEEEEEcC-------CCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQ-------TNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~-------~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
+..+.+.||+|.||.|++|.-.. ....||||...... ...+..|+++|+.+.+|+++..+..++.....
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~ 376 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP 376 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence 34567799999999999997431 14579999854333 45689999999999988888888777777888
Q ss_pred EEEEEecC-CCCHHHHHHHcC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC
Q 011988 77 NVLVIDLL-GPSLEDLFNFCS---------------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~---------------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 140 (473)
.++++||+ .|+|.+++..+. ..++..+.+.++.||+.|++||+++++|||||-..|||++ .
T Consensus 377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~---~ 453 (609)
T KOG0200|consen 377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT---K 453 (609)
T ss_pred eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec---C
Confidence 99999999 889999998665 2489999999999999999999999999999999999995 6
Q ss_pred CCcEEEEecCCcccccCCCCccccccccCCCccc--CccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCC
Q 011988 141 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTG--TARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKA 217 (473)
Q Consensus 141 ~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~G--t~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~ 217 (473)
+..+||+|||+|+....... |. .+...| ...|||||.+....|+.++||||||++|||+++ |..||.+...
T Consensus 454 ~~~~kIaDFGlar~~~~~~~-----y~-~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~ 527 (609)
T KOG0200|consen 454 NKVIKIADFGLARDHYNKDY-----YR-TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP 527 (609)
T ss_pred CCEEEEccccceeccCCCCc-----eE-ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence 78999999999986544332 11 111222 345999999999999999999999999999999 9999988442
Q ss_pred CCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 218 GTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 218 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
. ...++.+..... ...+..|+++++++|..||+.+|++||++.++.+.|...+..
T Consensus 528 ~--~~l~~~l~~G~r----~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~ 582 (609)
T KOG0200|consen 528 T--EELLEFLKEGNR----MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD 582 (609)
T ss_pred H--HHHHHHHhcCCC----CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence 1 122332322221 123456789999999999999999999999999999997654
No 387
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=8.1e-34 Score=271.78 Aligned_cols=219 Identities=17% Similarity=0.160 Sum_probs=173.0
Q ss_pred cCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCCHHHHHHHcC
Q 011988 18 GSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCS 96 (473)
Q Consensus 18 G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~ 96 (473)
|.||.||++++..+++.||+|.+.... ....|...+.... ++++..+..++...+..+++|||+ +++|.+++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~- 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--EYSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF- 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--hhhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh-
Confidence 899999999999999999999865543 2334444444444 455666666667788899999999 78999998743
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCc
Q 011988 97 RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176 (473)
Q Consensus 97 ~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~ 176 (473)
..+++..+..++.||+.||+|||++||+||||||+||+++ .++.++|+|||++....... ....++.
T Consensus 80 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~~~~~~----------~~~~~~~ 146 (237)
T cd05576 80 LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSEVEDSC----------DGEAVEN 146 (237)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhcccccc----------ccCCcCc
Confidence 4699999999999999999999999999999999999994 67889999999886554321 1235577
Q ss_pred cccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhc
Q 011988 177 RYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRS 256 (473)
Q Consensus 177 ~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~ 256 (473)
.|+|||.+.+..++.++|||||||++|||++|..||...... +.. ... ..+...+++++.++|.+||+
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--------~~~-~~~---~~~~~~~~~~~~~li~~~l~ 214 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG--------INT-HTT---LNIPEWVSEEARSLLQQLLQ 214 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--------ccc-ccc---cCCcccCCHHHHHHHHHHcc
Confidence 899999998888999999999999999999999987542211 000 000 01234578899999999999
Q ss_pred CCCCCCCCH
Q 011988 257 LRFDDKPDY 265 (473)
Q Consensus 257 ~dp~~RPt~ 265 (473)
.||++||++
T Consensus 215 ~dp~~R~~~ 223 (237)
T cd05576 215 FNPTERLGA 223 (237)
T ss_pred CCHHHhcCC
Confidence 999999986
No 388
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=7.6e-35 Score=290.26 Aligned_cols=204 Identities=23% Similarity=0.285 Sum_probs=171.9
Q ss_pred ccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCC-----CCCCeeEEeeEeCCe
Q 011988 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGG-----TGIPNLRWFGVEGDY 76 (473)
Q Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~-----~~i~~~~~~~~~~~~ 76 (473)
.+.++|.+....|.|-|++|..|.+...|..||||++... .+..-+.|++||++|+.. .++..+.-.+....+
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 4678999999999999999999999999999999995443 355567899999999732 222233333456778
Q ss_pred EEEEEecCCCCHHHHHHHcCCC--CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 77 NVLVIDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~~~--ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
.|||+|.+..+|.++++..+.. |.+..+..++.||..||..|-.+||+|.||||+|||+. .....+||||||.|..
T Consensus 509 LClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 509 LCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDFGSASF 586 (752)
T ss_pred eEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccCccccc
Confidence 8999999999999999876654 78899999999999999999999999999999999996 5667899999999987
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG 218 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~ 218 (473)
..+... +.+.-+..|.|||+++|.+|+...|+||.||+||||.||+..|.|.+..
T Consensus 587 ~~enei---------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN 641 (752)
T KOG0670|consen 587 ASENEI---------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN 641 (752)
T ss_pred cccccc---------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence 655432 2235567899999999999999999999999999999999999886543
No 389
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=279.03 Aligned_cols=256 Identities=21% Similarity=0.296 Sum_probs=194.9
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHh--cCCCCCCeeEEeeEe----CCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKIL--QGGTGIPNLRWFGVE----GDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L--~~~~~i~~~~~~~~~----~~~~~lv 80 (473)
....+.+.||+|.||.||+|. -+++.||||++.......++.|.+|+... +|.+++ .+...... ...++||
T Consensus 210 ~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl-~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENIL-QFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhh--ccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHH-HhhchhccCCccccceeEE
Confidence 346778899999999999998 46799999999999999999999999864 444444 33333322 2367899
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---------CCCcccCCCCCcEEEeeCCCCCcEEEEecC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---------KSFLHRDIKPDNFLMGLGRRANQVYIIDFG 150 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~---------~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 150 (473)
++|. .|+|.++++ ...+++....+|+..|+.||+|||+ ..|+|||||..|||| ..+.+..|+|||
T Consensus 287 t~fh~kGsL~dyL~--~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaDFG 361 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK--ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIADFG 361 (534)
T ss_pred eeeccCCcHHHHHH--hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeeccc
Confidence 9988 999999998 4579999999999999999999996 359999999999999 588999999999
Q ss_pred CcccccCCCCccccccccCCCcccCccccccccccCCC-CC-----chhhHHHHHHHHHHHHcCCC------------CC
Q 011988 151 LAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QS-----RRDDLESLGYVLMYFLRGSL------------PW 212 (473)
Q Consensus 151 la~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s-----~ksDVwSlGviL~elltG~~------------Pf 212 (473)
+|..+..... .......+||.+|||||++.|.. +. .+.||||+|.|||||++... ||
T Consensus 362 LAl~~~p~~~-----~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf 436 (534)
T KOG3653|consen 362 LALRLEPGKP-----QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF 436 (534)
T ss_pred eeEEecCCCC-----CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence 9998864332 12234579999999999998753 22 46899999999999997432 33
Q ss_pred C---CCCCCCHHHHHHHHhhccccccHHHHhc--CCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Q 011988 213 Q---GLKAGTKKQKYEKISEKKVSTSIEALCR--GYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276 (473)
Q Consensus 213 ~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~ 276 (473)
+ +.. .+..+.-..+..++..+.+..... ....-+.+.++.||..|++.|.|+.-+.+.+.++.
T Consensus 437 e~evG~h-Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 437 EAEVGNH-PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred hHHhcCC-CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 2 111 122222233344444444433332 23467899999999999999999999988888775
No 390
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-32 Score=314.18 Aligned_cols=249 Identities=14% Similarity=0.162 Sum_probs=185.5
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CC
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GP 86 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~ 86 (473)
.|...+.||+|+||.||+|++..++..||||....... ....|+++++.++|++++ .+..++......++||||+ ++
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~l~~l~HpnIv-~~~~~~~~~~~~~lv~Ey~~~g 768 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-IPSSEIADMGKLQHPNIV-KLIGLCRSEKGAYLIHEYIEGK 768 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-ccHHHHHHHhhCCCCCcc-eEEEEEEcCCCCEEEEeCCCCC
Confidence 45667889999999999999988999999998654332 234678899999865544 5555666777889999999 89
Q ss_pred CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 87 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 87 sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+|.+++. .+++..+..|+.||+.||+||| +.+|+||||||+||+++ ..+..++. ||........
T Consensus 769 ~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~---~~~~~~~~-~~~~~~~~~~----- 835 (968)
T PLN00113 769 NLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID---GKDEPHLR-LSLPGLLCTD----- 835 (968)
T ss_pred cHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC---CCCceEEE-eccccccccC-----
Confidence 9999996 4899999999999999999999 67999999999999994 55566654 6665433211
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC--HHHHHHHHhhc-cc----cccH
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT--KKQKYEKISEK-KV----STSI 236 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~i~~~-~~----~~~~ 236 (473)
....||..|+|||++.+..++.++|||||||++|||++|+.||....... ........... .. ...+
T Consensus 836 ------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (968)
T PLN00113 836 ------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSI 909 (968)
T ss_pred ------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccc
Confidence 22368899999999999999999999999999999999999995432111 11111100000 00 0000
Q ss_pred H---HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 237 E---ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 237 ~---~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
. ........++.+++..||+.||++||++.++.+.|+++..
T Consensus 910 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 910 RGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred cCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 0 0000112467889999999999999999999999988754
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-33 Score=283.88 Aligned_cols=275 Identities=22% Similarity=0.266 Sum_probs=205.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
.-|..++.||-|+||+|.++....|...||+|.+.+.+ ...+..|-.||.... .+-|+.+++-+.+.+..|+|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCceEEE
Confidence 34889999999999999999998999999999754432 334667888888877 55666677777888899999
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
|||+ ||++-.+|-. -+-|.+..+..++..+..|+++.|..|+|||||||+|||| |.+|++||+|||||+-+.-..
T Consensus 708 MdYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred EeccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceecc
Confidence 9999 9999999874 3479999999999999999999999999999999999999 589999999999997653210
Q ss_pred --------Ccccc----c-----------------------cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHH
Q 011988 160 --------THQHI----P-----------------------YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY 204 (473)
Q Consensus 160 --------~~~~~----p-----------------------~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~e 204 (473)
.+... + ......++||..|+|||++....|+..+|+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 00000 0 001245789999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 011988 205 FLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFD 284 (473)
Q Consensus 205 lltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~ 284 (473)
|+.|+.||..........++.... .... -..|.+++.+..++|.+++ -++++|..-.- .+ .-....|.
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~--~~l~--~~~~~~ls~e~~~li~kLc-~sad~RLGkng-~d------~vKaHpfF 931 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWR--NFLH--IPYQGNLSKEALDLIQKLC-CSADSRLGKNG-AD------QVKAHPFF 931 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehh--hccc--cccccccCHHHHHHHHHHh-cChhhhhcccc-hh------hhhcCccc
Confidence 999999998876654433322111 1111 1124567888888887754 45777753211 11 11223556
Q ss_pred Cccccccccccccc
Q 011988 285 YVFDWTILKYQQSQ 298 (473)
Q Consensus 285 ~~~dw~~~~~~~~~ 298 (473)
.-.||..+..+.++
T Consensus 932 kgIDfsslRkq~Ap 945 (1034)
T KOG0608|consen 932 KGIDFSSLRKQRAP 945 (1034)
T ss_pred cccchHhhhhccCC
Confidence 67888886554333
No 392
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-33 Score=289.60 Aligned_cols=253 Identities=21% Similarity=0.273 Sum_probs=204.8
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCc----EEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNE----EVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~----~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
.+..++||+|+||+||+|.+.-.|+ +||||++... ...++..|+-+|..|.|.+.+..+..+.... ..||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~--~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST--LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch--HHHH
Confidence 4457899999999999999876665 6888884332 2456889999999999777776665443332 5677
Q ss_pred EecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 81 IDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 81 ~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
.+|+ +|+|.|+++..+.++-.+..+.|..||++||.|||++++|||||-..|||+ .....+||.|||+|+.+..+.
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCccc
Confidence 7887 999999999988899999999999999999999999999999999999999 488999999999999887654
Q ss_pred CccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
..-+. ....-.+.|||-|.+....|+.++|||||||++||++| |..||++....+....+++... - .
T Consensus 853 ~ey~~-----~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR----L---s 920 (1177)
T KOG1025|consen 853 KEYSA-----PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER----L---S 920 (1177)
T ss_pred ccccc-----cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc----C---C
Confidence 42221 12223567999999999999999999999999999999 9999999876554444433222 1 1
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
-++.++.+++-++.+||..|++.||+|+++...|..+...
T Consensus 921 qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 921 QPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred CCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 1346789999999999999999999999999999887643
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=294.15 Aligned_cols=245 Identities=20% Similarity=0.242 Sum_probs=191.4
Q ss_pred EeeEeecCceE-EEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCCCCHHH
Q 011988 12 GRKIGSGSFGE-IYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLED 90 (473)
Q Consensus 12 ~~~LG~G~fG~-Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~ 90 (473)
.+.+|.|+.|+ ||+|. ..|+.||||.+......-..+|+..|+.-..|++|..++....+..+.||+.|+|.++|.+
T Consensus 514 ~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL~d 591 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGV--YEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSLQD 591 (903)
T ss_pred HHHcccCCCCcEEEEEe--eCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhHHH
Confidence 45678999885 79998 4688999999777777788999999999998998877777777888999999999999999
Q ss_pred HHHHcCCC---CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCC--CCCcEEEEecCCcccccCCCCccccc
Q 011988 91 LFNFCSRK---LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 91 ~l~~~~~~---ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~--~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
++...... ......+.++.|++.||++||+.+||||||||+||||+..+ ....++|+|||+++.+..... .
T Consensus 592 lie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s----S 667 (903)
T KOG1027|consen 592 LIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS----S 667 (903)
T ss_pred HHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc----h
Confidence 99853111 11145678899999999999999999999999999998532 335789999999998865433 2
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCc
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 244 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 244 (473)
++...+..||..|+|||++.....+.++|||||||++|+.++ |.+||..... .-.+|......- ..+.....
T Consensus 668 ~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~-----R~~NIl~~~~~L--~~L~~~~d 740 (903)
T KOG1027|consen 668 FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE-----RQANILTGNYTL--VHLEPLPD 740 (903)
T ss_pred hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH-----hhhhhhcCccce--eeeccCch
Confidence 334567889999999999999888899999999999999999 5999965322 212222211110 01111111
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 245 TEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 245 ~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.+..+||..|++.+|..||++.+|+
T Consensus 741 ~eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 741 CEAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred HHHHHHHHHhcCCCcccCCCHHHHh
Confidence 2889999999999999999988873
No 394
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=2.4e-31 Score=252.07 Aligned_cols=235 Identities=26% Similarity=0.342 Sum_probs=185.8
Q ss_pred CceEEEEEEEcCCCcEEEEEEcccCC----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCCC-CHHHHHH
Q 011988 19 SFGEIYLGTNIQTNEEVAIKLNVKTK----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGP-SLEDLFN 93 (473)
Q Consensus 19 ~fG~Vy~a~~~~~~~~vAiK~~~~~~----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g~-sL~~~l~ 93 (473)
+||.||+|.+..+++.||+|+..... ...+..|++.++.++ ++++..+..+.......++++|++++ +|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLK-HPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCC-CCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 68999999998889999999954433 467889999999996 44555555566667888999999955 9999987
Q ss_pred HcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcc
Q 011988 94 FCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLT 173 (473)
Q Consensus 94 ~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~ 173 (473)
... .++...++.++.+++.+|.|||+.+|+|+||+|.||+++ ..+.++|+|||++........ .....
T Consensus 80 ~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~~~~~~~~~--------~~~~~ 147 (244)
T smart00220 80 KRG-RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLARQLDPGGL--------LTTFV 147 (244)
T ss_pred hcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccceeeeccccc--------ccccc
Confidence 543 389999999999999999999999999999999999995 668999999999987655321 13456
Q ss_pred cCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHH
Q 011988 174 GTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHY 253 (473)
Q Consensus 174 Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~ 253 (473)
++..|++||.+.+..++.++||||||+++|+|++|..||..... .......+....... ......++.++.+++.+
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~ 223 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELFKKIGKPKPPF--PPPEWKISPEAKDLIRK 223 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHhccCCCC--ccccccCCHHHHHHHHH
Confidence 88899999999988899999999999999999999999976321 122222222211111 11111278999999999
Q ss_pred HhcCCCCCCCCHHHHHH
Q 011988 254 CRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 254 cl~~dp~~RPt~~~l~~ 270 (473)
||..+|++||++.++.+
T Consensus 224 ~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 224 LLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HccCCchhccCHHHHhh
Confidence 99999999999888864
No 395
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-32 Score=255.62 Aligned_cols=265 Identities=20% Similarity=0.313 Sum_probs=201.7
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCC-CeeEEeeEeCCeEEEEE
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGI-PNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i-~~~~~~~~~~~~~~lv~ 81 (473)
+.+.|.|.+.||+|-||.+-+|+++.++..+++|.+.+. ...+|.+|...--.|.+|.+| ..+...+...++++++|
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 567899999999999999999999999999999985443 345677777665566655544 44555567778999999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||+ .++|..-+. ...+-+.....++.|+++||.|||++++||||||.+||||-. .+...|||||||+.+......
T Consensus 102 E~aP~gdL~snv~--~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~-~df~rvKlcDFG~t~k~g~tV- 177 (378)
T KOG1345|consen 102 EFAPRGDLRSNVE--AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD-ADFYRVKLCDFGLTRKVGTTV- 177 (378)
T ss_pred ccCccchhhhhcC--cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec-CCccEEEeeecccccccCcee-
Confidence 999 788877665 345888999999999999999999999999999999999953 345699999999987654321
Q ss_pred ccccccccCCCcccCccccccccccCCC-----CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHH-HHHHHHhhccccc
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIE-----QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVST 234 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~ 234 (473)
....-+..|.+||...... ..+.+|||.||+++|.+++|++||+.....+.. ..+.+....+. .
T Consensus 178 ---------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~-~ 247 (378)
T KOG1345|consen 178 ---------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN-P 247 (378)
T ss_pred ---------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC-c
Confidence 1223456799999876432 467899999999999999999999853322221 12222222222 2
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQF 283 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~ 283 (473)
..+...+-+++.+..++++-|..++++|--..+..+....++.+..+..
T Consensus 248 ~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i~t 296 (378)
T KOG1345|consen 248 ALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLIKT 296 (378)
T ss_pred cCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhhcc
Confidence 3444556678999999999999999999777777777777777765543
No 396
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=1.2e-32 Score=250.22 Aligned_cols=250 Identities=20% Similarity=0.331 Sum_probs=192.8
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeE--eCCeEEEEEec
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGV--EGDYNVLVIDL 83 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~--~~~~~~lv~e~ 83 (473)
.++|++.+++|.|-|++||.|.+..+++.++||+++..+...+.+|++||+.|.++++|..+..+.. ......+++|+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~ 116 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEY 116 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhh
Confidence 4679999999999999999999999999999999988888999999999999997777766654433 34556788998
Q ss_pred CC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc
Q 011988 84 LG-PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ 162 (473)
Q Consensus 84 ~g-~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 162 (473)
.. .+...+. ..++..++..++.+++.||.|+|+.||+|||+||.|++|+ .....++|+|+|+|..+.....
T Consensus 117 v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYHp~~e-- 188 (338)
T KOG0668|consen 117 VNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKE-- 188 (338)
T ss_pred hccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcCCCce--
Confidence 84 4444443 3688899999999999999999999999999999999996 4567899999999988765432
Q ss_pred ccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHHhhc----------
Q 011988 163 HIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQ-GLKAGTKKQKYEKISEK---------- 230 (473)
Q Consensus 163 ~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~-~~~~~~~~~~~~~i~~~---------- 230 (473)
-+-.+.+..|--||.+...+ |+..-|+|||||+|..|+..+.||. |..+.+...++.++...
T Consensus 189 ------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 189 ------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred ------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 12335677788999987654 7899999999999999999988874 33333333233222110
Q ss_pred --cccccHHHHh----------------cC-CcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 231 --KVSTSIEALC----------------RG-YPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 231 --~~~~~~~~l~----------------~~-~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.+.+....+. .. ..++..+|+..+|..|-.+|+|+.|..
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam 320 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM 320 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence 0111111110 01 258899999999999999999988763
No 397
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-32 Score=246.31 Aligned_cols=211 Identities=21% Similarity=0.275 Sum_probs=170.4
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc----CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
....+..||+|+||.|-+-++..+|...|+|.+.. ....++.+|+.+......++.+.+++.........+|+||.
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 34456789999999999999999999999997332 33445777888877777777776665544556667999999
Q ss_pred CCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 84 LGPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 84 ~g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
+..||..+... .+..+++..+-+|+..++.||.|||++ .|||||+||+|||| +..|+|||||||++-.+.++.
T Consensus 127 M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 127 MDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred hhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceeehhhh
Confidence 99999888652 366799999999999999999999984 89999999999999 588999999999998877654
Q ss_pred CccccccccCCCcccCccccccccccCC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011988 160 THQHIPYRENKNLTGTARYASMNTHLGI----EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 231 (473)
Q Consensus 160 ~~~~~p~~~~~~~~Gt~~Y~APE~~~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 231 (473)
.. +.-.|...|||||.+..+ .|+-++||||||++++||.++++||..- .+..+++..+.+..
T Consensus 204 Ak--------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w--~tpF~qLkqvVeep 269 (282)
T KOG0984|consen 204 AK--------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW--GTPFQQLKQVVEEP 269 (282)
T ss_pred HH--------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc--CCHHHHHHHHhcCC
Confidence 32 124788999999988643 5899999999999999999999999753 34566666655543
No 398
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.4e-30 Score=273.08 Aligned_cols=252 Identities=19% Similarity=0.206 Sum_probs=172.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEc----------------CCCcEEEEEEcccCC-----------------chhHHHHH
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNI----------------QTNEEVAIKLNVKTK-----------------HPQLQYEA 52 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~----------------~~~~~vAiK~~~~~~-----------------~~~l~~E~ 52 (473)
.++|++.++||+|+||.||+|.+. ..++.||||.+.... ......|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 568999999999999999999753 234679999853321 11123466
Q ss_pred HHHHHhcCCCCCC-----eeEEeeE-------eCCeEEEEEecC-CCCHHHHHHHcC-----------------------
Q 011988 53 KLYKILQGGTGIP-----NLRWFGV-------EGDYNVLVIDLL-GPSLEDLFNFCS----------------------- 96 (473)
Q Consensus 53 ~il~~L~~~~~i~-----~~~~~~~-------~~~~~~lv~e~~-g~sL~~~l~~~~----------------------- 96 (473)
.++..+.+.+++. .+.++.. .....++||||+ +++|.+++....
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 6777777655422 1222211 234579999999 789999886321
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCc
Q 011988 97 RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTA 176 (473)
Q Consensus 97 ~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~ 176 (473)
..+++..++.|+.||+.||.|||+++|+||||||+|||++ .++.+||+|||+++........ ......+|+
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~------~~~~g~~tp 374 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINF------NPLYGMLDP 374 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCcc------CccccCCCc
Confidence 1246678899999999999999999999999999999994 6788999999999755332110 011224578
Q ss_pred cccccccccCCCC----------------------CchhhHHHHHHHHHHHHcCCC-CCCCCCCCCHH--------HHHH
Q 011988 177 RYASMNTHLGIEQ----------------------SRRDDLESLGYVLMYFLRGSL-PWQGLKAGTKK--------QKYE 225 (473)
Q Consensus 177 ~Y~APE~~~~~~~----------------------s~ksDVwSlGviL~elltG~~-Pf~~~~~~~~~--------~~~~ 225 (473)
.|+|||++..... ..+.||||+|||||+|++|.+ ||.+....... ....
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 9999999864321 124699999999999999986 77643221111 0011
Q ss_pred HHhhccccccHHHHhcCCcHHHHHHHHHHhcCCC---CCCCCHHHHH
Q 011988 226 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRF---DDKPDYAYLK 269 (473)
Q Consensus 226 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp---~~RPt~~~l~ 269 (473)
.+...... . .....+++..++|+.+||..+| .+|+++++++
T Consensus 455 ~~~~~~~~--~-~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL 498 (507)
T PLN03224 455 MYKGQKYD--F-SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQAL 498 (507)
T ss_pred hhcccCCC--c-ccccccChHHHHHHHHHhccCCCCcccCCCHHHHh
Confidence 11111111 1 1234567899999999999866 6899987763
No 399
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-33 Score=260.93 Aligned_cols=254 Identities=19% Similarity=0.275 Sum_probs=187.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc-----CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeC----C
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEG----D 75 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~-----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~----~ 75 (473)
...+.+-.+-||.|+||.||.++|..+|+.||+|.+.. .....+.+|+++|..++|.|.+..++...... .
T Consensus 51 qq~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFq 130 (449)
T KOG0664|consen 51 QQQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQ 130 (449)
T ss_pred ccccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHH
Confidence 33445567889999999999999999999999997432 22345778999999998777665554433211 1
Q ss_pred eEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 76 YNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 76 ~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
..|++.|++..+|..++- ..+.++...+.-+++||+.||+|||+.+|+||||||.|.|+ +.+..+||||||+|+..
T Consensus 131 EiYV~TELmQSDLHKIIV-SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 131 ELYVLTELMQSDLHKIIV-SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHHHHHhhhhheec-cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEeccccccccc
Confidence 246788888889988876 45679999999999999999999999999999999999999 47788999999999876
Q ss_pred cCCCCccccccccCCCcccCccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 156 RDTATHQHIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
..... .+ .+..+-|..|.|||+++|.. |+.+.||||.|||+.||+..+..|+...+....+.+-.+....-..
T Consensus 207 e~d~~-~h-----MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~E 280 (449)
T KOG0664|consen 207 DQRDR-LN-----MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQE 280 (449)
T ss_pred chhhh-hh-----hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHH
Confidence 54332 11 12345688999999999865 8999999999999999999999998765543333333322221111
Q ss_pred cHHHHhcC--------------------------CcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 235 SIEALCRG--------------------------YPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 235 ~~~~l~~~--------------------------~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
.+..-|.+ -.-+...++..++..||++|.+.++.
T Consensus 281 aMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A 340 (449)
T KOG0664|consen 281 AMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEA 340 (449)
T ss_pred HHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhh
Confidence 11111111 12346678888889999999875443
No 400
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=253.39 Aligned_cols=259 Identities=18% Similarity=0.248 Sum_probs=199.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCC-----cEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTN-----EEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~-----~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
..++++...+-+|.||.||.|.+++.. +.|.+|....... ..+..|.-.+..+.|++........-.+...
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~ 362 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT 362 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence 356888889999999999999876432 3455665322221 2355677777777777766666666667777
Q ss_pred EEEEEecC-CCCHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEe
Q 011988 77 NVLVIDLL-GPSLEDLFNFCS-------RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~-------~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 148 (473)
.++++.+. -++|..++..|+ +.++..+...++.|++.|++|||++||||.||...|++| ++.-+|||+|
T Consensus 363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVkltD 439 (563)
T KOG1024|consen 363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVKLTD 439 (563)
T ss_pred ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEEecc
Confidence 88888888 579999998553 347778889999999999999999999999999999999 4778999999
Q ss_pred cCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHH
Q 011988 149 FGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 149 FGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i 227 (473)
=.+++.+-..+.+.- ..+......||+||.+....|+.++|||||||+||||++ |+.||.+.++.+ ....+
T Consensus 440 saLSRDLFP~DYhcL-----GDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE---m~~yl 511 (563)
T KOG1024|consen 440 SALSRDLFPGDYHCL-----GDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE---MEHYL 511 (563)
T ss_pred chhccccCccccccc-----CCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH---HHHHH
Confidence 999987655443221 122234578999999999999999999999999999999 999998865432 22222
Q ss_pred hhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 228 SEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
..... -.-+-+||+++..+|..||...|++||+++++...|.++....
T Consensus 512 kdGyR----laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 512 KDGYR----LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred hccce----ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 22111 1123479999999999999999999999999999999886543
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=266.94 Aligned_cols=194 Identities=24% Similarity=0.387 Sum_probs=167.3
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----------chhHHHHHHHHHHhc--CCCCCCeeEEeeEeC
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----------HPQLQYEAKLYKILQ--GGTGIPNLRWFGVEG 74 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----------~~~l~~E~~il~~L~--~~~~i~~~~~~~~~~ 74 (473)
.|..++.||+|+||.|++|.++.+...|+||.+.+.. ...+-.|+.||..|+ .|.+|..+..|++++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 4999999999999999999999999999999865543 233668999999998 234555566778889
Q ss_pred CeEEEEEecC--CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 75 DYNVLVIDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 75 ~~~~lv~e~~--g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
+++||+||-- |-+|.+++.. +..+++.++..|+.||+.|+++||+.||||||||-+|+.+ +.+|.+||+|||.|
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~-kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsa 717 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEF-KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSA 717 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhc-cCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccch
Confidence 9999999988 5688888874 5579999999999999999999999999999999999999 58999999999998
Q ss_pred ccccCCCCccccccccCCCcccCccccccccccCCCC-CchhhHHHHHHHHHHHHcCCCCCCC
Q 011988 153 KRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQG 214 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~-s~ksDVwSlGviL~elltG~~Pf~~ 214 (473)
....... ...++||..|+|||++.|..| +..-|||+||++||.++....||..
T Consensus 718 a~~ksgp---------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 718 AYTKSGP---------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhcCCC---------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 7554321 246899999999999999887 7888999999999999999999864
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=4e-29 Score=230.66 Aligned_cols=207 Identities=29% Similarity=0.420 Sum_probs=177.6
Q ss_pred EeecCceEEEEEEEcCCCcEEEEEEcccCCc----hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCC-CCHH
Q 011988 15 IGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH----PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLG-PSLE 89 (473)
Q Consensus 15 LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~----~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g-~sL~ 89 (473)
||+|++|.||++.+..+++.++||+...... ..+.+|+++++.+.+ .++..+..+.......+++||+++ ++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH-PNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC-CCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999999888899999999665544 578999999999986 666666667777788999999995 9999
Q ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC-CCcEEEEecCCcccccCCCCcccccccc
Q 011988 90 DLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLAKRYRDTATHQHIPYRE 168 (473)
Q Consensus 90 ~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-~~~vkL~DFGla~~~~~~~~~~~~p~~~ 168 (473)
+++......++...++.++.+++.+|.+||++|++|+||+|.||+++ . .+.++|+|||.+........ .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~---~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD---SDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe---CCCCcEEEecCCceEEccCCcc-------h
Confidence 99985545689999999999999999999999999999999999995 4 68999999999987654321 1
Q ss_pred CCCcccCccccccccccCC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHH
Q 011988 169 NKNLTGTARYASMNTHLGI-EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEF 247 (473)
Q Consensus 169 ~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 247 (473)
.....+...|++||.+... .++.+.|+|+||+++++| ..+
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------~~~ 190 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------PEL 190 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------HHH
Confidence 1234678899999999887 788999999999999999 578
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHH
Q 011988 248 ASYFHYCRSLRFDDKPDYAYLKRL 271 (473)
Q Consensus 248 ~~li~~cl~~dp~~RPt~~~l~~~ 271 (473)
.+++..|+..+|++||++.++.+.
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhC
Confidence 899999999999999998887653
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=1.4e-30 Score=255.46 Aligned_cols=206 Identities=28% Similarity=0.447 Sum_probs=169.4
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcC---CCcEEEEEEcccCC-chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEE
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQ---TNEEVAIKLNVKTK-HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~---~~~~vAiK~~~~~~-~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~ 78 (473)
|.+.+.|.++++||+|.|+.||++.+.. ..+.||+|.+.... ...+..|+++|..+.+..+|..+..+...++..+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ 111 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA 111 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence 4567889999999999999999999887 78899999855544 4458899999999999999999998999999999
Q ss_pred EEEecCC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 79 LVIDLLG-PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 79 lv~e~~g-~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+||+|++ ..-.+++. .++..++..+++.++.||.++|.+|||||||||.|||.+ ...+.-.|+|||+|..+..
T Consensus 112 ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n--~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN--RRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred EEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc--cccCCceEEechhHHHHHh
Confidence 9999994 45555554 578999999999999999999999999999999999997 5567788999999973211
Q ss_pred CC------C-------c---c---------------------ccccccCCCcccCccccccccccCCC-CCchhhHHHHH
Q 011988 158 TA------T-------H---Q---------------------HIPYRENKNLTGTARYASMNTHLGIE-QSRRDDLESLG 199 (473)
Q Consensus 158 ~~------~-------~---~---------------------~~p~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlG 199 (473)
.. . . . ...........||++|.|||++...+ ++.++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 00 0 0 0 00011123457999999999998765 79999999999
Q ss_pred HHHHHHHcCCCCCCC
Q 011988 200 YVLMYFLRGSLPWQG 214 (473)
Q Consensus 200 viL~elltG~~Pf~~ 214 (473)
||++-++++.+||..
T Consensus 266 VI~Lslls~~~PFf~ 280 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFK 280 (418)
T ss_pred ceeehhhcccccccc
Confidence 999999999999954
No 404
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=3e-30 Score=245.04 Aligned_cols=255 Identities=21% Similarity=0.230 Sum_probs=194.6
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc-----CCchhHHHHHHHHHHhcCCCCCCeeEEeeEe-----C
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK-----TKHPQLQYEAKLYKILQGGTGIPNLRWFGVE-----G 74 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~-----~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~-----~ 74 (473)
+..+|.-++.+|.|.- .|..+.|.-.++.||+|.... ...+...+|..++..++|.++|..+..|... -
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 4568888999999998 788888888999999997322 2334567899999999988888877666432 2
Q ss_pred CeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 75 DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 75 ~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
...|+|||++..+|.+.+. -.++-+++..|+.|++.|++|||+.||+||||||+||++ ..+..+||+|||+|+.
T Consensus 94 ~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchhhcc
Confidence 3468999999999999987 347889999999999999999999999999999999999 5788999999999985
Q ss_pred ccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc--
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-- 232 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-- 232 (473)
.... . ..+.++.|..|.|||++.|..|...+||||+||++.||++|..-|.+....+...++.......-
T Consensus 168 e~~~--~------~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 168 EDTD--F------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred cCcc--c------ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHH
Confidence 4432 1 12456889999999999999999999999999999999999999987543222222211111100
Q ss_pred --------------------cccHHHHhcC------------CcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 233 --------------------STSIEALCRG------------YPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 233 --------------------~~~~~~l~~~------------~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
.....++.+. -.....+++.+||..||++|.+++++ |++.+.
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~da---L~HPY~ 313 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDA---LRHPYI 313 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHH---hcCCee
Confidence 0111111110 12457899999999999999996555 666543
No 405
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-30 Score=263.75 Aligned_cols=263 Identities=17% Similarity=0.254 Sum_probs=206.0
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEccc---CCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK---TKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~---~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.++|.++..+|.|.||.||+++++.+++..|+|+++- ....-++.|+-+++.++|++++.++..|- ..+..+|+||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsyl-r~dklwicME 92 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYL-RRDKLWICME 92 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhh-hhcCcEEEEE
Confidence 4689999999999999999999999999999998433 34455788999999999888888776553 4456799999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATH 161 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 161 (473)
|| |++|++... ...++++.++..+.+..+.||+|||+.|-+|||||-.|||++ +.+.+||.|||.+-.+.....
T Consensus 93 ycgggslQdiy~-~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDvklaDfgvsaqitati~- 167 (829)
T KOG0576|consen 93 YCGGGSLQDIYH-VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDVKLADFGVSAQITATIA- 167 (829)
T ss_pred ecCCCcccceee-ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCceeecccCchhhhhhhhh-
Confidence 99 778888765 456899999999999999999999999999999999999995 889999999999987665433
Q ss_pred cccccccCCCcccCcccccccccc---CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHH
Q 011988 162 QHIPYRENKNLTGTARYASMNTHL---GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEA 238 (473)
Q Consensus 162 ~~~p~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 238 (473)
..+.+.||+.|||||+-. .+.|...+|||++|++..|+-.-+.|-...... +.+.-.....+..+..+
T Consensus 168 ------KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm---r~l~LmTkS~~qpp~lk 238 (829)
T KOG0576|consen 168 ------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM---RALFLMTKSGFQPPTLK 238 (829)
T ss_pred ------hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH---HHHHHhhccCCCCCccc
Confidence 236789999999999764 456899999999999999999888886554321 11111111112222112
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH-----------HHHHHHHHHhCCCC
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLK-----------RLFRDLFIREGFQF 283 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~-----------~~L~~l~~~~~~~~ 283 (473)
-.....+.|.+|++.||.++|++||+++.++ .+..+++.+.+...
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~ 294 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPN 294 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCC
Confidence 2234678899999999999999999988663 34556666666443
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=5.6e-28 Score=220.28 Aligned_cols=167 Identities=17% Similarity=0.184 Sum_probs=128.1
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccc
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIP 165 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p 165 (473)
|+|.+++...+..+++.+++.|+.||+.||.|||+++ ||+|||++ .++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT---WDGLLKL--DGSVAFKTPE------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc---Cccceee--ccceEeeccc-------
Confidence 6899999866677999999999999999999999998 99999994 6788888 9999765432
Q ss_pred cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH--HHhcCC
Q 011988 166 YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE--ALCRGY 243 (473)
Q Consensus 166 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~ 243 (473)
...||..|+|||++.+..++.++|||||||++|||++|+.||....... ..+..+.......... .....+
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 135 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPADDPRDRSNLESV 135 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhccCCccccccHHHH
Confidence 1268999999999999999999999999999999999999997643211 2222221111111000 001122
Q ss_pred cH--HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Q 011988 244 PT--EFASYFHYCRSLRFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 244 p~--~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~ 277 (473)
+. ++.++|..||..+|++||++.+|++.+..+..
T Consensus 136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 136 SAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 23 79999999999999999999999877765543
No 407
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=2.1e-27 Score=223.24 Aligned_cols=196 Identities=31% Similarity=0.452 Sum_probs=163.4
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
|.+.+.||.|++|.||+|.+..+++.++||..... ....+..|+..++.+.+. ++..+..+.......++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~-~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHP-NIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCC-ChhhheeeeecCCceEEEEecc
Confidence 67889999999999999999888999999996554 345688899999999755 4555555566667889999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
+++|.+++......+++..+..++.|++.+|.+||+++++|+||+|.||+++ ..+.++|+|||++..+......
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---~~~~~~l~d~g~~~~~~~~~~~-- 154 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---MDGLVKLADFGLARFIHRDLAA-- 154 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeCceeeEecCcccc--
Confidence 4499999985433389999999999999999999999999999999999995 5689999999999877554210
Q ss_pred cccccCCCcccCccccccccc-cCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 011988 164 IPYRENKNLTGTARYASMNTH-LGIEQSRRDDLESLGYVLMYFLRGSLPWQG 214 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~-~~~~~s~ksDVwSlGviL~elltG~~Pf~~ 214 (473)
......++..|++||.+ ....++.++|||+||+++|+|++|+.||..
T Consensus 155 ----~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ----LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ----cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 11345678899999998 666788899999999999999999999965
No 408
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=1.4e-28 Score=274.72 Aligned_cols=188 Identities=14% Similarity=0.170 Sum_probs=135.2
Q ss_pred CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEee----------------
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL---------------- 137 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~---------------- 137 (473)
...++++||+++.+|.+++......+++.+++.|+.||+.||.|||++|||||||||+||||+.
T Consensus 52 ~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~ 131 (793)
T PLN00181 52 DDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 131 (793)
T ss_pred cchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence 3457888999999999999855567999999999999999999999999999999999999952
Q ss_pred CCCCCcEEEEecCCcccccCCCC--------cccccc-ccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcC
Q 011988 138 GRRANQVYIIDFGLAKRYRDTAT--------HQHIPY-RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRG 208 (473)
Q Consensus 138 ~~~~~~vkL~DFGla~~~~~~~~--------~~~~p~-~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG 208 (473)
.+..+.+||+|||+++....... ....++ .......||+.|||||++.+..++.++|||||||+||||++|
T Consensus 132 ~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhC
Confidence 12344567777777764321100 000000 001224689999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 209 SLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 209 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
..||.... ..+..+....... ..... .++...++..||..+|.+||++.+|++
T Consensus 212 ~~~~~~~~-----~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 212 VSSREEKS-----RTMSSLRHRVLPP---QILLN-WPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCchhhHH-----HHHHHHHHhhcCh---hhhhc-CHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 88875321 1122221111111 11111 345678999999999999999998843
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=1.6e-25 Score=225.74 Aligned_cols=179 Identities=20% Similarity=0.224 Sum_probs=136.2
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcC-CCcEEEEEEcccC--------CchhHHHHHHHHHHhcCCCCCCeeEEeeEe
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQ-TNEEVAIKLNVKT--------KHPQLQYEAKLYKILQGGTGIPNLRWFGVE 73 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~-~~~~vAiK~~~~~--------~~~~l~~E~~il~~L~~~~~i~~~~~~~~~ 73 (473)
+.+.++|.+.+.||+|+||+||+|.+.. +++.||||+.... ....+.+|+++|+.|.|+++++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 4567889999999999999999999876 6788899984322 123478999999999988888766543
Q ss_pred CCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCC-CCCcEEEeeCCCCCcEEEEecCC
Q 011988 74 GDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI-KPDNFLMGLGRRANQVYIIDFGL 151 (473)
Q Consensus 74 ~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDI-KP~NILl~~~~~~~~vkL~DFGl 151 (473)
...++||||+ |++|.. +. ... ...++.|++.||.|||++||+|||| ||+|||++ .++.+||+|||+
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~----~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDFGl 158 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR----PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDFQL 158 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC----ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEECcc
Confidence 3469999999 677852 21 111 1467899999999999999999999 99999994 567899999999
Q ss_pred cccccCCCCcccc-ccccCCCcccCccccccccccCCC------CCchhhHH
Q 011988 152 AKRYRDTATHQHI-PYRENKNLTGTARYASMNTHLGIE------QSRRDDLE 196 (473)
Q Consensus 152 a~~~~~~~~~~~~-p~~~~~~~~Gt~~Y~APE~~~~~~------~s~ksDVw 196 (473)
|+.+........+ .+.......++..|+|||.+.-.+ .+...|-|
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9988665433222 122234678899999999987543 23446665
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=7.9e-24 Score=206.87 Aligned_cols=256 Identities=30% Similarity=0.406 Sum_probs=189.8
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
|.+.+.||.|+||.||++.+. ..+++|.+.... ...+.+|+.++..+.+++.+..+..+.......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 789999999999999999976 778888743322 44588899999999988655555555566666799999
Q ss_pred cC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCC-cEEEEecCCcccccCC
Q 011988 83 LL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRYRDT 158 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~--~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~-~vkL~DFGla~~~~~~ 158 (473)
++ +++|.+++.... ..+....+..++.|++.+|.|+|+.+++||||||+||++. ..+ .++++|||+++.+...
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~---~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD---RDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---CCCCeEEEeccCcceecCCC
Confidence 99 788887776433 2699999999999999999999999999999999999995 455 7999999999865543
Q ss_pred CCccccccccCCCcccCccccccccccC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC-CHHHHHHHHhhccccc
Q 011988 159 ATHQHIPYRENKNLTGTARYASMNTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-TKKQKYEKISEKKVST 234 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~APE~~~~---~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~-~~~~~~~~i~~~~~~~ 234 (473)
....... .......||..|++||.+.+ ..++...|+||+|++++++++|..||...... ........+.......
T Consensus 156 ~~~~~~~-~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 156 GSTSSIP-ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred Ccccccc-ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 3211000 12356789999999999998 57899999999999999999999998765431 1122222222221110
Q ss_pred cHHHHhcCC----cHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q 011988 235 SIEALCRGY----PTEFASYFHYCRSLRFDDKPDYAYLKRL 271 (473)
Q Consensus 235 ~~~~l~~~~----p~~l~~li~~cl~~dp~~RPt~~~l~~~ 271 (473)
......... ...+.+++..|+..+|..|.+.......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 011111111 2578999999999999999987665443
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=1.2e-24 Score=232.81 Aligned_cols=259 Identities=20% Similarity=0.249 Sum_probs=186.9
Q ss_pred EEEeeEeecCceEEEEEEEcCCCcEEEEEEcc----cCCc-hh----HHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNV----KTKH-PQ----LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~----~~~~-~~----l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
.....+|.|.+|.|+.+......+.++.|... .... .. +..|.-+-..|.|.+.+..+..+.........
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~- 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS- 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh-
Confidence 45778999999999988877666666666422 1111 11 23344444456666655554433333333333
Q ss_pred EecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 81 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 81 ~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
||||..+|..++.. ...+...++..++.|++.||+|||+.||.||||||+|+++. ..+.+||+|||.+..+.-...
T Consensus 400 mE~~~~Dlf~~~~~-~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 400 MEYCPYDLFSLVMS-NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhcccHHHHHHHhc-ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCcceeeccCcc
Confidence 99996699999873 34689999999999999999999999999999999999995 778999999999987654432
Q ss_pred ccccccccCCCcccCccccccccccCCCCCc-hhhHHHHHHHHHHHHcCCCCCCCCCCCCHHH-HHHHHhhccccccHHH
Q 011988 161 HQHIPYRENKNLTGTARYASMNTHLGIEQSR-RDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ-KYEKISEKKVSTSIEA 238 (473)
Q Consensus 161 ~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~-ksDVwSlGviL~elltG~~Pf~~~~~~~~~~-~~~~i~~~~~~~~~~~ 238 (473)
.. ......++|+..|+|||++.+.+|.+ ..||||.|++++.|++|+.||......+... ................
T Consensus 476 ~~---~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~ 552 (601)
T KOG0590|consen 476 KN---IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNR 552 (601)
T ss_pred hh---hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHH
Confidence 11 12346789999999999999999965 5799999999999999999997654433221 1111122223334455
Q ss_pred HhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 239 LCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 239 l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
+...+|.+-+.+|-.||+.||.+|.|+++| |++-|.+.
T Consensus 553 ~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i---~~d~W~~~ 590 (601)
T KOG0590|consen 553 LLSLLPRETRIIIYRMLQLDPTKRITIEQI---LNDEWIRS 590 (601)
T ss_pred HHHhchhhHHHHHHHHccCChhheecHHHH---hhChHhhh
Confidence 667789999999999999999999997766 55555443
No 412
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89 E-value=5.4e-23 Score=199.47 Aligned_cols=230 Identities=23% Similarity=0.272 Sum_probs=146.3
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC------chhHHHHHHHHHHhcC----------CCCCCeeEEee
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK------HPQLQYEAKLYKILQG----------GTGIPNLRWFG 71 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~------~~~l~~E~~il~~L~~----------~~~i~~~~~~~ 71 (473)
.+...+.||.|+|+.||.+++..+++.+|||+..... ..++.+|.-....+.+ ...+..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3567889999999999999999999999999832221 1223333322222111 01111111111
Q ss_pred --------Ee---CCe-----EEEEEecCCCCHHHHHHHc---CCC---CCHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 011988 72 --------VE---GDY-----NVLVIDLLGPSLEDLFNFC---SRK---LSLKTVLMLADQMINRVEFVHSKSFLHRDIK 129 (473)
Q Consensus 72 --------~~---~~~-----~~lv~e~~g~sL~~~l~~~---~~~---ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIK 129 (473)
.. ... .++.|+.+.++|.+++... ... +.....+.+..|++..+++||..||||+|||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 11 111 2677888899999986532 221 2233446677999999999999999999999
Q ss_pred CCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccC--------CCCCchhhHHHHHHH
Q 011988 130 PDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLG--------IEQSRRDDLESLGYV 201 (473)
Q Consensus 130 P~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~--------~~~s~ksDVwSlGvi 201 (473)
|+|||+ +.+|.++|+||+........... ...+..|.+||.... ..++.+.|.|+||++
T Consensus 173 ~~nfll---~~~G~v~Lg~F~~~~r~g~~~~~----------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ 239 (288)
T PF14531_consen 173 PENFLL---DQDGGVFLGDFSSLVRAGTRYRC----------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGIT 239 (288)
T ss_dssp GGGEEE----TTS-EEE--GGGEEETTEEEEG----------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHH
T ss_pred eeeEEE---cCCCCEEEcChHHHeecCceeec----------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHH
Confidence 999999 47899999999887655432210 234577999997643 247899999999999
Q ss_pred HHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCC
Q 011988 202 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDK 262 (473)
Q Consensus 202 L~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~R 262 (473)
||.|++|.+||........... .-..|.++|+.++.||..+|+.||++|
T Consensus 240 ly~lWC~~lPf~~~~~~~~~~~------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 240 LYSLWCGRLPFGLSSPEADPEW------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHSS-STCCCGGGSTSGG------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHccCCCCCCCccccccc------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999999986543211110 122466889999999999999999987
No 413
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.9e-22 Score=220.59 Aligned_cols=255 Identities=23% Similarity=0.319 Sum_probs=185.8
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhc--CCCCCCeeEEeeEeCCeEEEEEe
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~--~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
-++.|.|.+.||.|+||.||+|.... |+.||||+......=++---.+++.+|+ -.+.|..+.......+..++|++
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e 774 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSE 774 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence 36789999999999999999999866 9999999966555433333334444444 11222233333445666789999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEee----CCCCCcEEEEecCCcccccC
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL----GRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~----~~~~~~vkL~DFGla~~~~~ 157 (473)
|. .|+|.++++ ..+.+++..+..|+.||+.-|+.||..+|||+||||+|+||.. +.+...++|+|||.+..+.-
T Consensus 775 y~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l 853 (974)
T KOG1166|consen 775 YSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL 853 (974)
T ss_pred ccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence 98 899999998 5667999999999999999999999999999999999999964 22345699999999965432
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
-.... ..+..++|-.+-.+|+..|.+++...|.|.|..+++-||.|++-= ...+... .....+.
T Consensus 854 fp~~~-----~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q--~~~g~~~---------~~~~~~~ 917 (974)
T KOG1166|consen 854 FPDGT-----KFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME--VKNGSSW---------MVKTNFP 917 (974)
T ss_pred cCCCc-----EEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--hcCCcce---------eccccch
Confidence 22111 224568899999999999999999999999999999999986532 1111000 0001011
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
.+.. -+-..+|+..+|+.|-..=|...+|+..|+..+.+.
T Consensus 918 Ry~~--~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~ 957 (974)
T KOG1166|consen 918 RYWK--RDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEH 957 (974)
T ss_pred hhhh--HHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence 1111 023457888888877777788999999999888664
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=2.4e-22 Score=186.18 Aligned_cols=135 Identities=23% Similarity=0.241 Sum_probs=102.3
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc------------hh-----------------HHHHHHHHHHhcCCC
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------------PQ-----------------LQYEAKLYKILQGGT 62 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~------------~~-----------------l~~E~~il~~L~~~~ 62 (473)
.+.||+|+||.||+|.+. +|+.||||++..... .. ...|++++..|.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 568999999999999986 899999998543211 11 234999999997543
Q ss_pred CCCeeEEeeEeCCeEEEEEecCCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccCCCCCcEEEeeCCC
Q 011988 63 GIPNLRWFGVEGDYNVLVIDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFV-HSKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 63 ~i~~~~~~~~~~~~~~lv~e~~g~-sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yL-H~~gIvHrDIKP~NILl~~~~~ 140 (473)
+.....+... ..+|||||+++ +|...+. ....++..+++.++.||+.+|.|| |+.||+||||||+|||++
T Consensus 81 -v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~---- 152 (190)
T cd05147 81 -IPCPEPILLK--SHVLVMEFIGDDGWAAPRL-KDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH---- 152 (190)
T ss_pred -CCCCcEEEec--CCEEEEEEeCCCCCcchhh-hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----
Confidence 2222222222 23899999955 4443322 245799999999999999999999 799999999999999994
Q ss_pred CCcEEEEecCCcccc
Q 011988 141 ANQVYIIDFGLAKRY 155 (473)
Q Consensus 141 ~~~vkL~DFGla~~~ 155 (473)
.+.++|+|||+|...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 367999999999754
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.87 E-value=3.9e-22 Score=188.06 Aligned_cols=170 Identities=14% Similarity=0.206 Sum_probs=125.8
Q ss_pred CCccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--ch----------hHHHHHHHHHHhcCCCCCCeeEE
Q 011988 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HP----------QLQYEAKLYKILQGGTGIPNLRW 69 (473)
Q Consensus 2 ~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~----------~l~~E~~il~~L~~~~~i~~~~~ 69 (473)
+..+.++|++.+.||.|+||.||++.+ ++..+|||++.... .+ .+.+|++.+.+|.++ +++.+..
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~-GI~~~~d 102 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE-GLASLND 102 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC-CCCcceE
Confidence 456789999999999999999999764 46689999954321 11 157888899999754 5555555
Q ss_pred eeEeC--------CeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC
Q 011988 70 FGVEG--------DYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 70 ~~~~~--------~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 140 (473)
++... ...+|+|||+ |.+|.++.. +++ ....+|+.+|..||..||+||||||+||+++ .
T Consensus 103 ~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~---~ 170 (232)
T PRK10359 103 FYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS---K 170 (232)
T ss_pred eeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe---C
Confidence 53322 3578999999 668887742 333 2456999999999999999999999999995 4
Q ss_pred CCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHH
Q 011988 141 ANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFL 206 (473)
Q Consensus 141 ~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ell 206 (473)
++ ++|+|||..+........ -...+...|..++|||+|||++..+.
T Consensus 171 ~g-i~liDfg~~~~~~e~~a~-------------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKAK-------------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhhH-------------------HHHHHHhHhcccccccceeEeehHHH
Confidence 55 999999998755332110 11344445677999999999987654
No 416
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.87 E-value=1.2e-22 Score=218.39 Aligned_cols=216 Identities=23% Similarity=0.359 Sum_probs=152.3
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCC
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLG 85 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g 85 (473)
..+|..++.|-.|+||.||+++++.+.+.+|+|+.+... +.+. ++... +..++|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l---ilRn--ilt~a----------------~npfvv----- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL---ILRN--ILTFA----------------GNPFVV----- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch---hhhc--ccccc----------------CCccee-----
Confidence 467999999999999999999999999999998633221 1111 11111 111111
Q ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcc---
Q 011988 86 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQ--- 162 (473)
Q Consensus 86 ~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~--- 162 (473)
++-..+++. -++++.. ++.+++|||+.||+|||+||+|.||+ .-+++|+.|||+++...-..+..
T Consensus 136 gDc~tllk~-~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 136 GDCATLLKN-IGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred chhhhhccc-CCCCcch--------hhHHhHhhccCCeecCCCCCCcceee---ecccccccchhhhhhhhhhccchhhh
Confidence 333444442 2234433 27899999999999999999999995 78999999999997643211110
Q ss_pred -ccc----cccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHH
Q 011988 163 -HIP----YRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIE 237 (473)
Q Consensus 163 -~~p----~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (473)
++. ..-.+..+||+.|.|||++..+.|+..+|+|++|+|+||++.|+.||.+.+.. +.+..+....+.. .+
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe---elfg~visd~i~w-pE 279 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---ELFGQVISDDIEW-PE 279 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH---HHHhhhhhhhccc-cc
Confidence 000 01135679999999999999999999999999999999999999999986543 3332222221111 11
Q ss_pred HHhcCCcHHHHHHHHHHhcCCCCCCCC
Q 011988 238 ALCRGYPTEFASYFHYCRSLRFDDKPD 264 (473)
Q Consensus 238 ~l~~~~p~~l~~li~~cl~~dp~~RPt 264 (473)
. -..+++|.+++|.++|..+|.+|--
T Consensus 280 ~-dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 280 E-DEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred c-CcCCCHHHHHHHHHHHHhChHhhcc
Confidence 1 3457899999999999999999963
No 417
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=3.9e-21 Score=177.85 Aligned_cols=192 Identities=17% Similarity=0.123 Sum_probs=137.3
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc--h-----hHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH--P-----QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~--~-----~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+.+...|+.|+||+||++.. .+.+++.+.+..... . .+.+|+++|+.|.++++++.+..+ ...+++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 34678899999999998874 677777665322221 1 467899999999988888888654 3358999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCC-CCCcEEEeeCCCCCcEEEEecCCcccccCCC
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI-KPDNFLMGLGRRANQVYIIDFGLAKRYRDTA 159 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDI-KP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 159 (473)
+|+ |.+|.+.+.. ....++.|++.+|.+||++||+|||| ||+|||++ .++.++|+|||+|.......
T Consensus 78 eyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred eeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCCceecCCcc
Confidence 998 7677654321 12457889999999999999999999 79999995 66789999999998544322
Q ss_pred Cccc-ccccc-----CCCcccCccccccccccCC-CCC-chhhHHHHHHHHHHHHcCCCCCCCCCC
Q 011988 160 THQH-IPYRE-----NKNLTGTARYASMNTHLGI-EQS-RRDDLESLGYVLMYFLRGSLPWQGLKA 217 (473)
Q Consensus 160 ~~~~-~p~~~-----~~~~~Gt~~Y~APE~~~~~-~~s-~ksDVwSlGviL~elltG~~Pf~~~~~ 217 (473)
.... ..++. ......++.|++|+...-. ..+ .+.+.++.|+.+|.++|+..++.+...
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 1000 00000 0012357788888865433 233 567888999999999999998866543
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=4.5e-21 Score=177.77 Aligned_cols=137 Identities=20% Similarity=0.264 Sum_probs=104.4
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc-----------------------------hhHHHHHHHHHHhcCC
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH-----------------------------PQLQYEAKLYKILQGG 61 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~-----------------------------~~l~~E~~il~~L~~~ 61 (473)
+.+.||+|+||.||+|.+. +|+.||||+...... ..+..|...+..+.+.
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999986 899999998543311 1135788889888855
Q ss_pred CCCCeeEEeeEeCCeEEEEEecCCCC-HH-HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeC
Q 011988 62 TGIPNLRWFGVEGDYNVLVIDLLGPS-LE-DLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLG 138 (473)
Q Consensus 62 ~~i~~~~~~~~~~~~~~lv~e~~g~s-L~-~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~ 138 (473)
. +.....+... ..+|||||+++. +. ..+. ...++..++..++.|++.+|.+||+ +||+||||||+|||++
T Consensus 80 ~-i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-- 152 (190)
T cd05145 80 G-VPVPEPILLK--KNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-- 152 (190)
T ss_pred C-CCCceEEEec--CCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE--
Confidence 4 3333223222 248999999553 33 3333 3468889999999999999999999 9999999999999994
Q ss_pred CCCCcEEEEecCCcccccC
Q 011988 139 RRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 139 ~~~~~vkL~DFGla~~~~~ 157 (473)
++.++|+|||+|+....
T Consensus 153 --~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 --DGKPYIIDVSQAVELDH 169 (190)
T ss_pred --CCCEEEEEcccceecCC
Confidence 57899999999986543
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=4.9e-22 Score=213.80 Aligned_cols=248 Identities=17% Similarity=0.146 Sum_probs=170.1
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
+|...+.||.+.|=.|.+|++. .|. |+||++.+.. ..+...|++ ...+++++.+++. .........|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfq-k~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQ-KVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchH-HHHHhhHHHHHH
Confidence 6889999999999999999863 455 8999965544 223334444 3334444444443 335566677888
Q ss_pred EecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCC
Q 011988 81 IDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTAT 160 (473)
Q Consensus 81 ~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 160 (473)
-+|...+|.|.+. ...-+..-+.+.|+.||+.||..+|..||+|+|||.+||||+ .-+=+.|+||..-+..--+..
T Consensus 100 RqyvkhnLyDRlS-TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVKHNLYDRLS-TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHhhhhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccCCccCCCC
Confidence 8999999999987 223367788999999999999999999999999999999996 556688999987654221111
Q ss_pred c-cccccccCCCcccCccccccccccCC----------C-CCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHHHH
Q 011988 161 H-QHIPYRENKNLTGTARYASMNTHLGI----------E-QSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKI 227 (473)
Q Consensus 161 ~-~~~p~~~~~~~~Gt~~Y~APE~~~~~----------~-~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~i 227 (473)
. ..+.|.. .+...-..|.|||.|... . .+++-||||+||++.||++ |++||.- ...-.|...
T Consensus 176 NPadf~fFF-DTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~ 250 (1431)
T KOG1240|consen 176 NPADFTFFF-DTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSG 250 (1431)
T ss_pred CcccceEEE-ecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhcc
Confidence 0 0010100 111123469999987641 1 5788999999999999998 8899842 111111111
Q ss_pred hhccccccHHHHhcCC-cHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q 011988 228 SEKKVSTSIEALCRGY-PTEFASYFHYCRSLRFDDKPDYAYLKRLF 272 (473)
Q Consensus 228 ~~~~~~~~~~~l~~~~-p~~l~~li~~cl~~dp~~RPt~~~l~~~L 272 (473)
. ....+.+...+ ...++.+|..|++.||.+|.++++.++.-
T Consensus 251 ---~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 251 ---N-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred ---C-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 1 22222333332 35789999999999999999999886653
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.84 E-value=5.6e-22 Score=204.16 Aligned_cols=249 Identities=19% Similarity=0.266 Sum_probs=188.5
Q ss_pred eEeecCceEEEEEEEc---CCCcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-
Q 011988 14 KIGSGSFGEIYLGTNI---QTNEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL- 84 (473)
Q Consensus 14 ~LG~G~fG~Vy~a~~~---~~~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~- 84 (473)
.+|+|.||.|+++.-. ..+.-+|+|+..+.. ......|..++..++.++.+..+..........++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 3799999999987532 345668888733321 1234568888888887888878877777777788888888
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHI 164 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 164 (473)
|+.|...+. ....+.+..+..+...++.+++++|+.+|+|||+|++||++ +..|++++.|||+++...+...
T Consensus 81 gg~lft~l~-~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~---- 152 (612)
T KOG0603|consen 81 GGDLFTRLS-KEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKI---- 152 (612)
T ss_pred cchhhhccc-cCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhh----
Confidence 667776665 34568889999999999999999999999999999999999 5889999999999987765432
Q ss_pred ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCc
Q 011988 165 PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYP 244 (473)
Q Consensus 165 p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p 244 (473)
.+||..|||||++. .....+|.||||++++||++|..||.+ +....|...+... ...+.
T Consensus 153 -------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~~~~Il~~~~~~-----p~~l~ 211 (612)
T KOG0603|consen 153 -------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DTMKRILKAELEM-----PRELS 211 (612)
T ss_pred -------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HHHHHHhhhccCC-----chhhh
Confidence 28999999999998 457789999999999999999999987 2233333322221 22345
Q ss_pred HHHHHHHHHHhcCCCCCCCCH--HHHHHHHHHHHHHhCCCCCCccccccccccccc
Q 011988 245 TEFASYFHYCRSLRFDDKPDY--AYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQ 298 (473)
Q Consensus 245 ~~l~~li~~cl~~dp~~RPt~--~~l~~~L~~l~~~~~~~~~~~~dw~~~~~~~~~ 298 (473)
.+..+++.+++..+|..|--. ..+.+..++.+ -...+|+.+...+.+
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f-------~~~i~~~~l~~r~~~ 260 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEF-------FQSIDWNELEARSRP 260 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhccCcchhHHHhccch-------heeeeHhhHhhcCCC
Confidence 778899999999999999754 34444444433 456788877655433
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=8.9e-21 Score=185.08 Aligned_cols=196 Identities=18% Similarity=0.210 Sum_probs=145.8
Q ss_pred CCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC-CCcEEEEecCCc
Q 011988 74 GDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR-ANQVYIIDFGLA 152 (473)
Q Consensus 74 ~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~-~~~vkL~DFGla 152 (473)
+...|+||.-...+|.+++. .+..+..+...|+.|+++|+.|||.+||.|||+|.+||||-.+++ ...+.|.|||.|
T Consensus 315 ~~tlylvMkrY~~tLr~yl~--~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc 392 (598)
T KOG4158|consen 315 PKTLYLVMKRYRQTLREYLW--TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC 392 (598)
T ss_pred CceEEEehhcchhhHHHHHh--cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence 44569999999999999997 456788889999999999999999999999999999999977543 346789999988
Q ss_pred ccccCCCCccccccccC-CCcccCccccccccccCCC------CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHH
Q 011988 153 KRYRDTATHQHIPYREN-KNLTGTARYASMNTHLGIE------QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYE 225 (473)
Q Consensus 153 ~~~~~~~~~~~~p~~~~-~~~~Gt~~Y~APE~~~~~~------~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~ 225 (473)
-.-. ......||... -...|....||||+....+ --.|+|.|+.|.+.||++....||.+....... ..
T Consensus 393 LAd~--~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~--~r 468 (598)
T KOG4158|consen 393 LADD--NHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD--TR 468 (598)
T ss_pred eecc--ccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec--hh
Confidence 5322 22233444322 2346788999999987543 124899999999999999999999873221110 01
Q ss_pred HHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHh
Q 011988 226 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIRE 279 (473)
Q Consensus 226 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~ 279 (473)
...+ ..++.+...+|+.+.+++..+|+.||.+|++..-..+.|+=.+...
T Consensus 469 ~Yqe----~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~ 518 (598)
T KOG4158|consen 469 TYQE----SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRM 518 (598)
T ss_pred hhhh----hhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHhcC
Confidence 1111 2234456788999999999999999999999876666665444433
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.81 E-value=6e-19 Score=165.46 Aligned_cols=134 Identities=16% Similarity=0.225 Sum_probs=100.6
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcC----CCCCCeeEEeeEeCC---e-EEEE
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQG----GTGIPNLRWFGVEGD---Y-NVLV 80 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~----~~~i~~~~~~~~~~~---~-~~lv 80 (473)
.+.||+|+||.||. +..++.. +||+.... ....+.+|+.+++.|.+ +++|..++.+...+. + +.+|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 56899999999995 6777666 68985443 34568999999999953 445555555544432 3 4478
Q ss_pred EecCC---CCHHHHHHHcCCCCCHHHHHHHHHHHHHHH-HHHHhCCCcccCCCCCcEEEeeCC-CCCcEEEEecCCc
Q 011988 81 IDLLG---PSLEDLFNFCSRKLSLKTVLMLADQMINRV-EFVHSKSFLHRDIKPDNFLMGLGR-RANQVYIIDFGLA 152 (473)
Q Consensus 81 ~e~~g---~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL-~yLH~~gIvHrDIKP~NILl~~~~-~~~~vkL~DFGla 152 (473)
|||+| ++|.++++. ..+++. ..++.|++.++ +|||+++||||||||+|||++..+ ....++|+||+.+
T Consensus 84 ~e~~G~~~~tL~~~l~~--~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQ--CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred ecCCCCcchhHHHHHHc--ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99965 799999974 346655 36688888888 999999999999999999997433 3458999995544
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.80 E-value=2.6e-19 Score=171.51 Aligned_cols=140 Identities=19% Similarity=0.219 Sum_probs=107.5
Q ss_pred ceEEEeeEeecCceEEEEEE-EcCCCcEEEEEEcccCCc---------------------------hhHHHHHHHHHHhc
Q 011988 8 KFRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLNVKTKH---------------------------PQLQYEAKLYKILQ 59 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~-~~~~~~~vAiK~~~~~~~---------------------------~~l~~E~~il~~L~ 59 (473)
-|.+.+.||+|+||.||+|. +..+|+.||||+...... ..+..|+.++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 667999999998543210 12468999999997
Q ss_pred CCCCCCeeEEeeEeCCeEEEEEecCCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccCCCCCcEEEee
Q 011988 60 GGTGIPNLRWFGVEGDYNVLVIDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGL 137 (473)
Q Consensus 60 ~~~~i~~~~~~~~~~~~~~lv~e~~g~-sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~ 137 (473)
+ .++.....+... ..++||||+++ +|..+.. ....+...++..++.||+.+|.+||++| |+||||||+|||++
T Consensus 109 ~-~~i~~p~~~~~~--~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 E-AGVPVPKPIAWR--RNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred h-cCCCCCeeeEec--CceEEEEEecCCccccccc-ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 5 333333333222 24799999955 5655432 2335667778899999999999999999 99999999999994
Q ss_pred CCCCCcEEEEecCCcccc
Q 011988 138 GRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 138 ~~~~~~vkL~DFGla~~~ 155 (473)
.+.++|+|||+|...
T Consensus 184 ---~~~i~LiDFg~a~~~ 198 (237)
T smart00090 184 ---DGKVVIIDVSQSVEL 198 (237)
T ss_pred ---CCCEEEEEChhhhcc
Confidence 578999999998754
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.78 E-value=1.6e-19 Score=168.54 Aligned_cols=241 Identities=12% Similarity=0.155 Sum_probs=176.1
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEc-----ccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-----VKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~-----~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
..++-+|.+...|+.|+|++.. ..++.|++ ......+|..|.-.|+.+.|+++++.+..+....+. +++..|
T Consensus 192 lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnl-v~isq~ 268 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNL-VIISQY 268 (448)
T ss_pred hhhhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCc-eEeeee
Confidence 4466788899999999999753 34556652 222345688898899999988888887776655544 455555
Q ss_pred C-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC--CcccCCCCCcEEEeeCCCCCcEE--EEecCCcccccC
Q 011988 84 L-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVY--IIDFGLAKRYRD 157 (473)
Q Consensus 84 ~-g~sL~~~l~~~~~-~ls~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vk--L~DFGla~~~~~ 157 (473)
+ .++|..++..... .++..++.+++.+|+.|+.|||+.. |.---|....++|+ ++.+.+ .+|--++...
T Consensus 269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid---edltarismad~kfsfqe-- 343 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID---EDLTARISMADTKFSFQE-- 343 (448)
T ss_pred ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec---chhhhheecccceeeeec--
Confidence 5 8999999984332 3678899999999999999999864 33446788889994 444444 3443333211
Q ss_pred CCCccccccccCCCcccCccccccccccCCCC---CchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccc
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQ---SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVST 234 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~---s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 234 (473)
....-.+.||+||.+...+- -+++|+|||.++||||.|...||.+..+.+-..++ . +..
T Consensus 344 ------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki---a---leg 405 (448)
T KOG0195|consen 344 ------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI---A---LEG 405 (448)
T ss_pred ------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh---h---hcc
Confidence 12234678999999987764 36789999999999999999999887664333222 1 122
Q ss_pred cHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 011988 235 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 275 (473)
Q Consensus 235 ~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l 275 (473)
....++++++..+..||..|++.||.+||.|+.|+-+|+++
T Consensus 406 lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 406 LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 23345678889999999999999999999999999888875
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.78 E-value=5.9e-20 Score=186.03 Aligned_cols=242 Identities=19% Similarity=0.208 Sum_probs=159.0
Q ss_pred CceEEEeeEeecCceEEEEEEEcCC---CcEEEEEEcccCC---chhHHHHHHHHHHhcCCCCCCeeE-----E--e---
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQT---NEEVAIKLNVKTK---HPQLQYEAKLYKILQGGTGIPNLR-----W--F--- 70 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~---~~~vAiK~~~~~~---~~~l~~E~~il~~L~~~~~i~~~~-----~--~--- 70 (473)
..+.+.+..+..+++.++...-... .+.++-|...... .....+++..+....+++...... . +
T Consensus 244 ~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~ 323 (516)
T KOG1033|consen 244 GSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRN 323 (516)
T ss_pred ccccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccc
Confidence 3455566666677776665543322 2333333321111 122334444444455555443322 0 0
Q ss_pred -eEeCCeEEEEEecC-CCCHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEE
Q 011988 71 -GVEGDYNVLVIDLL-GPSLEDLFNF--CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYI 146 (473)
Q Consensus 71 -~~~~~~~~lv~e~~-g~sL~~~l~~--~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL 146 (473)
.....+.+|.|++| ..+|.+++.. .....+....+.++.|++.|++| +|.+|||+||.||++. .+.++||
T Consensus 324 ~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kI 397 (516)
T KOG1033|consen 324 KVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKI 397 (516)
T ss_pred ccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhh
Confidence 01134678999999 7899999962 23357788899999999999999 9999999999999995 5668999
Q ss_pred EecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCHHHHHH
Q 011988 147 IDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYE 225 (473)
Q Consensus 147 ~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~ 225 (473)
.|||+........+ ...++.......||..||+||.+.|..|+.++||||||+||+|++. -...|.-. ....
T Consensus 398 gDFgl~ts~~~~~~-~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~------~t~~ 470 (516)
T KOG1033|consen 398 GDFGLVTSQDKDET-VAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI------ATLT 470 (516)
T ss_pred hhhhheeecccCCc-ccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH------Hhhh
Confidence 99999987665541 1112333456789999999999999999999999999999999997 33333221 1112
Q ss_pred HHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCH
Q 011988 226 KISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDY 265 (473)
Q Consensus 226 ~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~ 265 (473)
.+....++ +.+..++| +-..|+.+++...|.+||++
T Consensus 471 d~r~g~ip---~~~~~d~p-~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 471 DIRDGIIP---PEFLQDYP-EEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred hhhcCCCC---hHHhhcCc-HHHHHHHHhcCCCcccCchH
Confidence 22222221 12223343 44689999999999999943
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=3.6e-18 Score=160.44 Aligned_cols=130 Identities=25% Similarity=0.435 Sum_probs=103.5
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
+.||+|++|.||+|.+ .+..|+||+..... ...+.+|+.++..+.+.+ +.....++......+++|
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAG-VNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCeEEEEeCCCCEEEE
Confidence 6799999999999986 67889999743221 123667899999998544 443344444556678999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
||+ |.+|.+++.... . ....++.+|+.+|.+||+.|++|+|++|.|||++ .+.++|+|||++..
T Consensus 79 e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence 999 789999987422 2 7889999999999999999999999999999994 57899999999864
No 427
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=2e-18 Score=177.72 Aligned_cols=212 Identities=17% Similarity=0.226 Sum_probs=160.6
Q ss_pred HhcCCCCCCeeEEeeEeCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccCCCCCcEE
Q 011988 57 ILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF-LHRDIKPDNFL 134 (473)
Q Consensus 57 ~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gI-vHrDIKP~NIL 134 (473)
.+. |.++..+.+...++...+++.+|| .++|.|.+.....+++..-...++.+|+.||+|||...| .|+.|+..|++
T Consensus 3 ~l~-h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nCl 81 (484)
T KOG1023|consen 3 QLD-HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCL 81 (484)
T ss_pred ccc-hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccce
Confidence 455 445556666667778889999999 889999998767788999999999999999999998766 99999999999
Q ss_pred EeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCC-------CCchhhHHHHHHHHHHHHc
Q 011988 135 MGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIE-------QSRRDDLESLGYVLMYFLR 207 (473)
Q Consensus 135 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~-------~s~ksDVwSlGviL~ellt 207 (473)
+ +....+||.|||+......... +.......-...|.|||.+.+.. .+.+.||||||++++|+++
T Consensus 82 v---d~~w~lklt~~Gl~~~~~~~~~-----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 82 V---DSRWVLKLTDFGLNSLLEETAE-----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred e---eeeEEEEechhhhccccccccc-----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 9 5889999999999877643110 00111223456799999998742 3677999999999999999
Q ss_pred CCCCCCCCCCCCH-HHHHHHHhh---ccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 208 GSLPWQGLKAGTK-KQKYEKISE---KKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 208 G~~Pf~~~~~~~~-~~~~~~i~~---~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
.+.||........ .+.+..+.. ....+.+.... .+++++..++..||..+|++||+++.+...++.+...
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccCccccccccCChHHHHHHHHhcCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 9999976333221 233333322 22334444333 6677999999999999999999999999888877654
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.75 E-value=1.1e-17 Score=155.66 Aligned_cols=126 Identities=25% Similarity=0.391 Sum_probs=99.1
Q ss_pred eEeecCceEEEEEEEcCCCcEEEEEEcccCC-----------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.||+|+||.||+|. .++..|++|+..... ...+.+|++++..+.+.. +.....+.......+++||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAG-VNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEEEECCCCEEEEE
Confidence 47999999999998 467889999833211 133567999999998553 3333444555666789999
Q ss_pred cC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 83 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 83 ~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
|+ |.+|.+++.... . .++.|++.+|.+||+.||+|+|++|.|||++ .+.++|+|||++..
T Consensus 78 ~~~g~~l~~~~~~~~--~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~ 138 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN--D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKY 138 (199)
T ss_pred EECCccHHHHHhhcH--H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcC
Confidence 99 889998876321 1 7899999999999999999999999999994 67899999999865
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.73 E-value=2.5e-17 Score=153.52 Aligned_cols=135 Identities=21% Similarity=0.310 Sum_probs=102.8
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-------------------------chhHHHHHHHHHHhcCCC
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-------------------------HPQLQYEAKLYKILQGGT 62 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-------------------------~~~l~~E~~il~~L~~~~ 62 (473)
.|.+.+.||.|+||.||+|.+ .+|+.||||+..... ......|..++..+.+..
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 488899999999999999986 489999999743221 012567888888887542
Q ss_pred -CCCeeEEeeEeCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC
Q 011988 63 -GIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 63 -~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 140 (473)
.++.. +. ....+++|||+ |++|..+.. ......++.+|+.+|.++|+.||+||||||+||+++ .
T Consensus 95 i~v~~~--~~--~~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~---~ 160 (198)
T cd05144 95 FPVPKP--ID--WNRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD---D 160 (198)
T ss_pred CCCCce--ee--cCCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---C
Confidence 22222 22 23458999999 667765532 134567899999999999999999999999999994 6
Q ss_pred CCcEEEEecCCcccccC
Q 011988 141 ANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 141 ~~~vkL~DFGla~~~~~ 157 (473)
++.++|+|||++.....
T Consensus 161 ~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 161 DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcEEEEECCccccCCC
Confidence 78999999999975543
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=1.1e-16 Score=171.47 Aligned_cols=132 Identities=24% Similarity=0.425 Sum_probs=102.2
Q ss_pred CceEEEeeEeecCceEEEEEEEcCCCcEEEEEEc-cc-CC---------chhHHHHHHHHHHhcCCCCCCeeEEeeEeCC
Q 011988 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLN-VK-TK---------HPQLQYEAKLYKILQGGTGIPNLRWFGVEGD 75 (473)
Q Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~-~~-~~---------~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~ 75 (473)
..|...+.||+|+||+||+|.+.. ..+++|+. .+ .. ...+.+|+++++.+++++ +.....+.....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~p~~~~~~~~ 409 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAG-VPTPVIYDVDPE 409 (535)
T ss_pred cccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccC-CCeeEEEEEeCC
Confidence 345668899999999999998643 33444431 11 11 134678999999998655 444445555566
Q ss_pred eEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
..+++|||+ |++|.+++. ....++.|++.+|.|||+.||+||||||+|||+ +.+.++|+|||+++.
T Consensus 410 ~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl----~~~~~~liDFGla~~ 476 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV----RDDRLYLIDFGLGKY 476 (535)
T ss_pred CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE----ECCcEEEEeCccccc
Confidence 678999999 889998875 356789999999999999999999999999999 356899999999964
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=3.3e-16 Score=144.21 Aligned_cols=134 Identities=24% Similarity=0.338 Sum_probs=94.3
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc-----hh----------------------HHHHHHHHHHhcCCC-C
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH-----PQ----------------------LQYEAKLYKILQGGT-G 63 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~-----~~----------------------l~~E~~il~~L~~~~-~ 63 (473)
.+.||+|+||.||+|.+. +++.||||+...... .. ...|...+..+.+.. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999975 899999998543211 00 134566666665332 2
Q ss_pred CCeeEEeeEeCCeEEEEEecCCC-CH-HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCC
Q 011988 64 IPNLRWFGVEGDYNVLVIDLLGP-SL-EDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 64 i~~~~~~~~~~~~~~lv~e~~g~-sL-~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~ 140 (473)
++....+ ...+++|||+.+ .+ ...+.... .. ..+..++.+++.++.++|. .||+|+||||+||+++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~---- 149 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD---- 149 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----
Confidence 3333222 235899999954 21 11122111 11 6788999999999999999 9999999999999994
Q ss_pred CCcEEEEecCCcccccC
Q 011988 141 ANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 141 ~~~vkL~DFGla~~~~~ 157 (473)
++.++|+|||.+.....
T Consensus 150 ~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CCcEEEEECcccccccC
Confidence 68899999999976544
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.63 E-value=7.1e-15 Score=141.10 Aligned_cols=131 Identities=16% Similarity=0.210 Sum_probs=95.7
Q ss_pred eeEe-ecCceEEEEEEEcCCCcEEEEEEccc----------------CCchhHHHHHHHHHHhcCCCC-CCeeEEeeE-e
Q 011988 13 RKIG-SGSFGEIYLGTNIQTNEEVAIKLNVK----------------TKHPQLQYEAKLYKILQGGTG-IPNLRWFGV-E 73 (473)
Q Consensus 13 ~~LG-~G~fG~Vy~a~~~~~~~~vAiK~~~~----------------~~~~~l~~E~~il~~L~~~~~-i~~~~~~~~-~ 73 (473)
..|| .||.|+||.+.. .+..++||.... .....+.+|+.++..|.+..+ ++....+.. .
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 899999999875 477889986432 112346789999999985543 333333322 2
Q ss_pred CCe---EEEEEecCC--CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEe
Q 011988 74 GDY---NVLVIDLLG--PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148 (473)
Q Consensus 74 ~~~---~~lv~e~~g--~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 148 (473)
... .++|||++. .+|.+++.. ..++... +.||+.+|.+||++||+||||||.|||++ .++.++|+|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~---~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE--APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD---PDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc--CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc---CCCCEEEEE
Confidence 222 259999884 589988863 3455543 57899999999999999999999999995 556899999
Q ss_pred cCCccc
Q 011988 149 FGLAKR 154 (473)
Q Consensus 149 FGla~~ 154 (473)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 999864
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=4.3e-15 Score=130.27 Aligned_cols=131 Identities=19% Similarity=0.314 Sum_probs=105.1
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-chhHHHHHHHHHHhcCC-CCCCeeEEeeEeCCeEEEEEecCC-CC
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-HPQLQYEAKLYKILQGG-TGIPNLRWFGVEGDYNVLVIDLLG-PS 87 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-~~~l~~E~~il~~L~~~-~~i~~~~~~~~~~~~~~lv~e~~g-~s 87 (473)
+++.||.|.++.||++... +..++||...... ...+..|+.+++.+.+. ..++.+..+.......+++|||+. ..
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 4678999999999999964 3789999864443 35688999999999876 556666666666678899999984 44
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 88 LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 88 L~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
+..+ +......++.+++.+|.+||.. +++|+||+|.|||++ ..+.++|+|||.+..
T Consensus 80 ~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~---~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD---DGKILGIIDWEYAGY 138 (155)
T ss_pred cccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---CCcEEEEEecccccC
Confidence 4432 5566778899999999999984 799999999999995 468899999999863
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=5.1e-17 Score=174.34 Aligned_cols=252 Identities=23% Similarity=0.289 Sum_probs=186.0
Q ss_pred CCceEEEeeEeecCceEEEEEEEcCC-CcEEEEEEcccCC-----chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNIQT-NEEVAIKLNVKTK-----HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~~vAiK~~~~~~-----~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
...|.+.+.||+|+|+.|-+.....+ ...+|.|.+.... ......|..+-+.+..|.++..+.......+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45689999999999999998886433 3456666533222 12234577777777767777777667778888899
Q ss_pred EEecC-CCCHHHHH-HHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccCCCCCcEEEeeCCCCC-cEEEEecCCcccc
Q 011988 80 VIDLL-GPSLEDLF-NFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKRY 155 (473)
Q Consensus 80 v~e~~-g~sL~~~l-~~~~~~ls~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~~~~~~-~vkL~DFGla~~~ 155 (473)
++++. |+++.+.+ .......+...+-.++.|+..+|.|+| ..++.||||||+|.+++ ..+ .+++.|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~---~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD---ESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc---cCCCcccCCCchhhccc
Confidence 99998 77887777 322225677788899999999999999 99999999999999995 555 8999999999988
Q ss_pred cC-CCCccccccccCCCccc-CccccccccccCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccc
Q 011988 156 RD-TATHQHIPYRENKNLTG-TARYASMNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 232 (473)
Q Consensus 156 ~~-~~~~~~~p~~~~~~~~G-t~~Y~APE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 232 (473)
.. ..... .....+| ++.|+|||.+.+.. ..+..|+||+|+++.-+++|..||....... ..+......+.
T Consensus 176 ~~~~g~~~-----~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~--~~~~~~~~~~~ 248 (601)
T KOG0590|consen 176 RNKNGAER-----SLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD--GRYSSWKSNKG 248 (601)
T ss_pred cccCCcce-----eeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc--ccceeeccccc
Confidence 77 33211 1234567 99999999999854 5788999999999999999999997643322 11222222211
Q ss_pred cccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 233 STSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 233 ~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
. ........+.....+++..++..+|..|.+.+++
T Consensus 249 ~-~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~ 283 (601)
T KOG0590|consen 249 R-FTQLPWNSISDQAHDLLHKILKENPSNRLSIEEL 283 (601)
T ss_pred c-cccCccccCChhhhhcccccccCCchhccccccc
Confidence 1 0112345677889999999999999999996655
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.55 E-value=4.6e-15 Score=153.23 Aligned_cols=252 Identities=17% Similarity=0.157 Sum_probs=187.6
Q ss_pred CCceEEEeeEee--cCceEEEEEEE--cCCCcEEEEEEcccC-----CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCe
Q 011988 6 GNKFRLGRKIGS--GSFGEIYLGTN--IQTNEEVAIKLNVKT-----KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDY 76 (473)
Q Consensus 6 ~~~y~i~~~LG~--G~fG~Vy~a~~--~~~~~~vAiK~~~~~-----~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~ 76 (473)
.+.|.+.+.+|. |.+|.||.+.. ..++..+|+|.-... ....-.+|+.-.+.+..+...............
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 455778889999 99999999988 788899999972111 112234566666666655555554445567788
Q ss_pred EEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHH----HHHHHHhCCCcccCCCCCcEEEeeCCCC-CcEEEEecCC
Q 011988 77 NVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMIN----RVEFVHSKSFLHRDIKPDNFLMGLGRRA-NQVYIIDFGL 151 (473)
Q Consensus 77 ~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~----aL~yLH~~gIvHrDIKP~NILl~~~~~~-~~vkL~DFGl 151 (473)
.++-.|+|+.+|..+......-++...++.++.+... ||.++|+.+|+|-|+||+||++. .+ ..++++|||+
T Consensus 193 lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~---~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 193 LFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT---SDWTSCKLTDFGL 269 (524)
T ss_pred ceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc---cccceeecCCcce
Confidence 8999999999999988755556888999999999999 99999999999999999999996 44 7899999999
Q ss_pred cccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhcc
Q 011988 152 AKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 231 (473)
Q Consensus 152 a~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 231 (473)
...+.+...... +.......|...|++||...+ -++..+|||+||.++.+..+|..++..-.... ...+...
T Consensus 270 v~~i~~~~~~~~--~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-W~~~r~~---- 341 (524)
T KOG0601|consen 270 VSKISDGNFSSV--FKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS-WSQLRQG---- 341 (524)
T ss_pred eEEccCCccccc--eeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC-ccccccc----
Confidence 998876543221 112233467889999999876 57889999999999999999877765432111 1111111
Q ss_pred ccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 011988 232 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKR 270 (473)
Q Consensus 232 ~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~ 270 (473)
....++|.+...++...+..++..++-.|++.+.+..
T Consensus 342 --~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 342 --YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1234567777788888999999999999988766543
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.52 E-value=5.8e-14 Score=146.16 Aligned_cols=138 Identities=20% Similarity=0.301 Sum_probs=96.7
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCCchh-------------------------------------------HH
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-------------------------------------------LQ 49 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~-------------------------------------------l~ 49 (473)
+.||.|++|+||+|+. .+|+.||||+........ +.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5699999999999985 589999999854433222 23
Q ss_pred HHHHHHHHhc----CCCCCCeeEEeeEeCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHH-HHHHHHhCCC
Q 011988 50 YEAKLYKILQ----GGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMIN-RVEFVHSKSF 123 (473)
Q Consensus 50 ~E~~il~~L~----~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~-aL~yLH~~gI 123 (473)
+|...+..+. +.+.+.....+.......+|||||+ |.+|.++.......++ ...++.+++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence 3444444432 3344443344444445579999999 7788887653222232 3456666665 4788999999
Q ss_pred cccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 124 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 124 vHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
+|+|+||.||++. .++.++|+|||++..+..
T Consensus 279 ~H~D~hPgNilv~---~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 279 FHADLHPGNIFVL---KDGKIIALDFGIVGRLSE 309 (437)
T ss_pred eeCCCCcccEEEC---CCCcEEEEeCCCeeECCH
Confidence 9999999999994 678999999999987643
No 437
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.44 E-value=7.4e-13 Score=119.64 Aligned_cols=125 Identities=19% Similarity=0.285 Sum_probs=95.1
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCCH
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSL 88 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL 88 (473)
++.|+.|.++.||++.. .+..|+||+..... ...+..|+.+++.+.+...++.+..+.. ...+++||++ |.++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 46789999999999985 47889999954432 3457899999999987666666655543 3357999999 5455
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCC-----cccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 89 EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF-----LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 89 ~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gI-----vHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
.+. . .....++.+++.+|..||..++ +|+|++|.||+++ .+.++|+|||.+.
T Consensus 79 ~~~------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTE------D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAG 135 (170)
T ss_pred ccc------c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEeccccc
Confidence 432 0 1123457899999999999885 9999999999994 4579999999985
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.44 E-value=8.3e-12 Score=131.96 Aligned_cols=142 Identities=18% Similarity=0.283 Sum_probs=92.2
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCch-----------------------------------------
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP----------------------------------------- 46 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~----------------------------------------- 46 (473)
.|.. +.||+|++|+||+|+...+|+.||||+..+....
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4565 7899999999999998877999999985433211
Q ss_pred --hHHHHHHHHHHhc----CCCCCCeeEEeeEeCCeEEEEEecC-CCCHHHHHHHcCCC-----CCHHHHHHHHHHHHHH
Q 011988 47 --QLQYEAKLYKILQ----GGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRK-----LSLKTVLMLADQMINR 114 (473)
Q Consensus 47 --~l~~E~~il~~L~----~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~~~-----ls~~~~~~i~~qi~~a 114 (473)
++.+|+..+.++. +.+.+.....|.......+|||||+ |..+.++....... +....+..++.||
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi--- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV--- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH---
Confidence 1333444444443 3333333344444455679999999 77887753211222 3333333444444
Q ss_pred HHHHHhCCCcccCCCCCcEEEeeC-CCCCcEEEEecCCcccccC
Q 011988 115 VEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 115 L~yLH~~gIvHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~ 157 (473)
+..|++|+|+||.||+++.+ ...+.++++|||++..+..
T Consensus 277 ----f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ----FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ----HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 46999999999999999622 1123899999999976643
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.43 E-value=1.2e-12 Score=120.94 Aligned_cols=135 Identities=19% Similarity=0.223 Sum_probs=96.8
Q ss_pred EeeEeecCceEEEEEEEcC------CCcEEEEEEcccC-------------C------------chhH----HHHHHHHH
Q 011988 12 GRKIGSGSFGEIYLGTNIQ------TNEEVAIKLNVKT-------------K------------HPQL----QYEAKLYK 56 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~------~~~~vAiK~~~~~-------------~------------~~~l----~~E~~il~ 56 (473)
...||.|--+.||.|.... .+..+|||+.... . ...+ .+|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998543 3578999972110 0 0112 37999999
Q ss_pred HhcCC-CCCCeeEEeeEeCCeEEEEEecCCCC-H-HHHHHHcCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccCCCCCc
Q 011988 57 ILQGG-TGIPNLRWFGVEGDYNVLVIDLLGPS-L-EDLFNFCSRKLSLKTVLMLADQMINRVEFV-HSKSFLHRDIKPDN 132 (473)
Q Consensus 57 ~L~~~-~~i~~~~~~~~~~~~~~lv~e~~g~s-L-~~~l~~~~~~ls~~~~~~i~~qi~~aL~yL-H~~gIvHrDIKP~N 132 (473)
+|... -.+|.+..+ ...+|||||++++ + ...++ ...++..++..+..|++.+|..| |..||||+||++.|
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk--d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK--DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh--ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 98743 234444332 4568999999763 2 11222 22356667788899999999999 89999999999999
Q ss_pred EEEeeCCCCCcEEEEecCCccccc
Q 011988 133 FLMGLGRRANQVYIIDFGLAKRYR 156 (473)
Q Consensus 133 ILl~~~~~~~~vkL~DFGla~~~~ 156 (473)
||+. .+.++|+|||.|....
T Consensus 156 IL~~----~~~v~iIDF~qav~~~ 175 (197)
T cd05146 156 MLWH----DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EEEE----CCcEEEEECCCceeCC
Confidence 9994 4679999999987553
No 440
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.35 E-value=2.4e-11 Score=108.78 Aligned_cols=141 Identities=21% Similarity=0.268 Sum_probs=109.2
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEE-c-ccCCchh---------HHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKL-N-VKTKHPQ---------LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~-~-~~~~~~~---------l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
.+..|-+|+-+.|+++. ..|+.++||. . +.-.++. ..+|+++|.++..- +|+....+..+.....|
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEecCCCeE
Confidence 67788999999999998 4789999997 2 2233333 46799999888733 66666667777777889
Q ss_pred EEecCCC--CHHHHHHHcCCCCCH-HHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 80 VIDLLGP--SLEDLFNFCSRKLSL-KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 80 v~e~~g~--sL~~~l~~~~~~ls~-~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
+|||..+ ++.+++...-..-.. .-...++.+|-+.|.-||..+|||+||..+||++..++....+.|+|||++..
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9999966 888888644333233 33378889999999999999999999999999997655566679999999864
No 441
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=2.1e-11 Score=109.54 Aligned_cols=126 Identities=25% Similarity=0.407 Sum_probs=97.3
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEE-ccc-CCchh---------HHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKL-NVK-TKHPQ---------LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~-~~~-~~~~~---------l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~ 81 (473)
..|++|+-+.||.+.+ -|..+++|. ..+ -.+++ -.+|++++..+. ..+|+....|..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 4578999999999965 455688887 322 22332 457899999887 447777777888888889999
Q ss_pred ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 82 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 82 e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
||. |..|.+++... ...++..+-.-+.-||..||||+||.++||+++ .+.++++|||++.
T Consensus 79 e~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~ 139 (204)
T COG3642 79 EYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGE 139 (204)
T ss_pred EEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCccc
Confidence 999 55677787733 245666677777889999999999999999995 4559999999996
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.23 E-value=2.3e-12 Score=139.96 Aligned_cols=270 Identities=18% Similarity=0.157 Sum_probs=183.9
Q ss_pred cCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC------CchhHHHHHHHHHHhcCCCCCCeeEEe---eEeCC
Q 011988 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT------KHPQLQYEAKLYKILQGGTGIPNLRWF---GVEGD 75 (473)
Q Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~------~~~~l~~E~~il~~L~~~~~i~~~~~~---~~~~~ 75 (473)
-.+.+.+.+-+-+|.++.++.+.-..++...++|+.... .......+-. +..++..+.+..+ .....
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~----~~i~p~~P~v~~~~~s~~~rs 877 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSN----ILITPRSPAVVRSFPSFPCRS 877 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccC----ccccCCCCceecccCCCCCCC
Confidence 346688888999999999999987677766666652111 1111111111 1111122222211 23556
Q ss_pred eEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 76 YNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
..+|+|+|+ +++|...+... ...+.+-....+..+..+++|||...++|+|++|.|+|+. ..+..++.|||....
T Consensus 878 P~~L~~~~~~~~~~~Skl~~~-~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~---~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLHNS-GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA---YDGHRPLTDFGTLSK 953 (1205)
T ss_pred CcchhhHHhccCCchhhhhcC-CCcccccccchhHHHHhhhhccccchhhcccccccchhhc---ccCCcccCccccccc
Confidence 678999998 77888887743 3567777788888899999999999999999999999994 788999999984433
Q ss_pred ccCC---------------------CCcccc---ccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCC
Q 011988 155 YRDT---------------------ATHQHI---PYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSL 210 (473)
Q Consensus 155 ~~~~---------------------~~~~~~---p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~ 210 (473)
...- ...... ..+......||+.|.+||...+...+..+|+|++|++++|.++|..
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 2110 000000 1123456789999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhCCCCCCccccc
Q 011988 211 PWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWT 290 (473)
Q Consensus 211 Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~~~~~~~~~~dw~ 290 (473)
||.... ..+.++.+.......+. -....+.+..+++...+..++.+|-.+.-- ....+-.+....+|+
T Consensus 1034 p~na~t---pq~~f~ni~~~~~~~p~--g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~-------~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1034 PFNAET---PQQIFENILNRDIPWPE--GPEEGSYEAQDLINRLLTEEPTQRLGAKGA-------AEVKGHPFFQDVDWE 1101 (1205)
T ss_pred CCCCcc---hhhhhhccccCCCCCCC--CccccChhhhhhhhhhhccCchhccCcccc-------cccccCCccCCCCcc
Confidence 997644 34444555544443322 123457889999999999999999775421 122344566778999
Q ss_pred cccc
Q 011988 291 ILKY 294 (473)
Q Consensus 291 ~~~~ 294 (473)
.+..
T Consensus 1102 ~l~~ 1105 (1205)
T KOG0606|consen 1102 NLAL 1105 (1205)
T ss_pred cccc
Confidence 8754
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=5.9e-12 Score=130.37 Aligned_cols=239 Identities=19% Similarity=0.137 Sum_probs=163.4
Q ss_pred CCceEEEeeEeecCceEEEEEEEc-CCCcEEEEEEcccCCch-----hHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEE
Q 011988 6 GNKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLNVKTKHP-----QLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~~~vAiK~~~~~~~~-----~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~l 79 (473)
..+|.++..||.|.|+.|+.+... .++..|++|...+.... .-..|+.+...+..+.++..+..-....+..++
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 457889999999999999998755 67888999863332211 124566666667655555553222223333458
Q ss_pred EEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCC
Q 011988 80 VIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDT 158 (473)
Q Consensus 80 v~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 158 (473)
-.||| ++++...+ .....+++...+.+..|++.++.++|++.++|+|+||+||++.. +.+..++.|||.++.+.-.
T Consensus 344 p~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~--~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISN--DGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred chhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeecc--chhhhhcccccccccccee
Confidence 88999 66665544 34567889999999999999999999999999999999999962 2277889999998753221
Q ss_pred CCccccccccCCCcccCcccc--ccccccCCCCCchhhHHHHHHHHHHHHcCCC-CCCCCCCCCHHHHHHHHhhcccccc
Q 011988 159 ATHQHIPYRENKNLTGTARYA--SMNTHLGIEQSRRDDLESLGYVLMYFLRGSL-PWQGLKAGTKKQKYEKISEKKVSTS 235 (473)
Q Consensus 159 ~~~~~~p~~~~~~~~Gt~~Y~--APE~~~~~~~s~ksDVwSlGviL~elltG~~-Pf~~~~~~~~~~~~~~i~~~~~~~~ 235 (473)
. ..+.+..++. +++......+..+.|++|||..+.+.++|.. ++.+... ..+....
T Consensus 421 ~----------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~-------~~i~~~~---- 479 (524)
T KOG0601|consen 421 S----------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS-------LTIRSGD---- 479 (524)
T ss_pred c----------ccccccccccccchhhccccccccccccccccccccccccCcccCcccccc-------eeeeccc----
Confidence 1 1123333444 5666666678999999999999999999753 3333211 1111111
Q ss_pred HHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 236 IEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 236 ~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
.+ ...+...++..+.+.+...++..||.+.++.
T Consensus 480 ~p-~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~ 512 (524)
T KOG0601|consen 480 TP-NLPGLKLQLQVLLKVMINPDRKRRPSAVELS 512 (524)
T ss_pred cc-CCCchHHhhhhhhhhhcCCccccchhhhhhc
Confidence 11 1223346788888889999999999876654
No 444
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.12 E-value=5.8e-10 Score=116.94 Aligned_cols=181 Identities=17% Similarity=0.181 Sum_probs=128.2
Q ss_pred eEEEeeEeecCceEEE-EEEEcCCCcEEEEEEcccCCc---hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 9 FRLGRKIGSGSFGEIY-LGTNIQTNEEVAIKLNVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy-~a~~~~~~~~vAiK~~~~~~~---~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
|.| ...+-++.+ || .|..+.++.+|.|++.+.... ....+-++-|+.|+|++++.++..+..++ ..|||.|-+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~-~~ylvTErV 91 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG-TLYLVTERV 91 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC-ceEEEeecc
Confidence 555 444444444 44 466678888998888554444 44667788899999887777776555444 779999988
Q ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccc
Q 011988 85 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQH 163 (473)
Q Consensus 85 g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 163 (473)
.+ |..+++. +....+...+.||+.||.||| +++++|++|.-+.|++ +..|..||++|-++.........
T Consensus 92 ~P-l~~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~~-- 161 (690)
T KOG1243|consen 92 RP-LETVLKE----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNAP-- 161 (690)
T ss_pred cc-HHHHHHH----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCcc--
Confidence 53 5566663 346778888999999999998 6789999999999999 48899999999998655432210
Q ss_pred cccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCC
Q 011988 164 IPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGS 209 (473)
Q Consensus 164 ~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~ 209 (473)
.....--..|..|+.+.... -..|.|-|||+++|++.|.
T Consensus 162 -----~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 162 -----AKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred -----cccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 01112222356666544322 3469999999999999993
No 445
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.11 E-value=5.2e-11 Score=114.83 Aligned_cols=176 Identities=12% Similarity=0.141 Sum_probs=116.0
Q ss_pred eEEEEEecC-CCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC--CCcccCCCCCcEEEeeCCCCCcEEEEec
Q 011988 76 YNVLVIDLL-GPSLEDLFNF---CSRKLSLKTVLMLADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDF 149 (473)
Q Consensus 76 ~~~lv~e~~-g~sL~~~l~~---~~~~ls~~~~~~i~~qi~~aL~yLH~~--gIvHrDIKP~NILl~~~~~~~~vkL~DF 149 (473)
..+++.||+ -++|..+|++ +...+..+...+|+.||+.||.|||+. -|+|+++..+-|++. .++.+||.--
T Consensus 146 rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig~~ 222 (458)
T KOG1266|consen 146 RVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIGSV 222 (458)
T ss_pred ceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEeccc
Confidence 457788888 8899999863 445688999999999999999999986 499999999999994 6676665321
Q ss_pred CCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCC-CCCCCCCHHHHHHHHh
Q 011988 150 GLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW-QGLKAGTKKQKYEKIS 228 (473)
Q Consensus 150 Gla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf-~~~~~~~~~~~~~~i~ 228 (473)
-... .... .......+.....+-+.|.+||.-.....+-++|||+||++.+||..+..-- .........+. +.
T Consensus 223 ap~s-~h~s--~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~---ia 296 (458)
T KOG1266|consen 223 APDS-THPS--VNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEEN---IA 296 (458)
T ss_pred Cccc-cchh--hhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhh---hh
Confidence 1110 0000 0000011223345678899999877666788999999999999999876542 11111111111 11
Q ss_pred hccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 229 EKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 229 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
.. +..+. ..--+.++..|++-.|..||++.++
T Consensus 297 ~~-----i~~le---n~lqr~~i~kcl~~eP~~rp~ar~l 328 (458)
T KOG1266|consen 297 NV-----IIGLE---NGLQRGSITKCLEGEPNGRPDARLL 328 (458)
T ss_pred hh-----eeecc---CccccCcCcccccCCCCCCcchhhh
Confidence 10 00011 1223578899999999999998765
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=6.6e-10 Score=104.49 Aligned_cols=137 Identities=20% Similarity=0.270 Sum_probs=98.2
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC----CchhHHHHHHHHHHhcCCCC-CCeeEEeeEeC---CeEEEEEecC
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT----KHPQLQYEAKLYKILQGGTG-IPNLRWFGVEG---DYNVLVIDLL 84 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~-i~~~~~~~~~~---~~~~lv~e~~ 84 (473)
+.|+.|.++.||++... +|+.+++|+.... ....+..|..+++.+.+... ++.+..+.... ...+++||++
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 57899999999999863 3688999985432 24568999999999986432 55555554443 2568999999
Q ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------------------
Q 011988 85 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS------------------------------------------- 120 (473)
Q Consensus 85 -g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~------------------------------------------- 120 (473)
|.++.+.+. ...++......++.+++..|.+||+
T Consensus 83 ~G~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 83 DGRVLRDRLL--RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CCEecCCCCC--CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 555655432 1346667777777777777777773
Q ss_pred -------------CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 121 -------------KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 121 -------------~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
..++|+|+.|.|||++.+ ..+.+.|+||+.+.
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~ 205 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccc
Confidence 236899999999999521 14568999999885
No 447
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.09 E-value=2e-09 Score=107.29 Aligned_cols=255 Identities=12% Similarity=0.178 Sum_probs=157.3
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCe-eEE-----ee-EeCCeEEEEE
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPN-LRW-----FG-VEGDYNVLVI 81 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~-~~~-----~~-~~~~~~~lv~ 81 (473)
....+.||+|+.+.+|-.- .-+. .+-|+..+.-...-...+..|...-.++.+.. +.| ++ ..+....+.|
T Consensus 13 i~~gr~LgqGgea~ly~l~--e~~d-~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLG--EVRD-QVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred cCCCccccCCccceeeecc--hhhc-hhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 3456789999999999654 2222 34577444332222223333333333333332 111 12 2334466777
Q ss_pred ecCCC--CHHHHHHHc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 82 DLLGP--SLEDLFNFC-----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 82 e~~g~--sL~~~l~~~-----~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
..+.+ -..+++.-. -..+.+..+++.+..|+.+...||..|.+-+|+.++|||++ +...|.|.|=..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEcccceee
Confidence 77622 333333211 12378899999999999999999999999999999999996 778888888443222
Q ss_pred ccCCCCccccccccCCCcccCcccccccccc-----CCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCCC----HHH-H
Q 011988 155 YRDTATHQHIPYRENKNLTGTARYASMNTHL-----GIEQSRRDDLESLGYVLMYFLRG-SLPWQGLKAGT----KKQ-K 223 (473)
Q Consensus 155 ~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGviL~elltG-~~Pf~~~~~~~----~~~-~ 223 (473)
..+.. . .-..+|...|.+||.-. +-+-+...|.|.||+++++++.| ++||.+..... ..+ .
T Consensus 167 ~~ng~--~------~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 167 NANGT--L------HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred ccCCc--e------EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 11111 1 12457899999999754 44557789999999999999986 99998754211 111 0
Q ss_pred HH--------HHhhccccccHHHHhcCCcHHHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHHH
Q 011988 224 YE--------KISEKKVSTSIEALCRGYPTEFASYFHYCRSL--RFDDKPDYAYLKRLFRDLFI 277 (473)
Q Consensus 224 ~~--------~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~--dp~~RPt~~~l~~~L~~l~~ 277 (473)
+. +-.......+...-..-+|+.+..++.+|+.. ++.-||+++.-...|..+-.
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 00 00001111122212234689999999999964 36689999877666666543
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.07 E-value=7.7e-09 Score=100.74 Aligned_cols=133 Identities=20% Similarity=0.147 Sum_probs=93.2
Q ss_pred CceEEEEEEEcCCCcEEEEEEcccCC------------ch--hHHHHHHHHHHhcCCC-CCCeeEEeeEe-----CCeEE
Q 011988 19 SFGEIYLGTNIQTNEEVAIKLNVKTK------------HP--QLQYEAKLYKILQGGT-GIPNLRWFGVE-----GDYNV 78 (473)
Q Consensus 19 ~fG~Vy~a~~~~~~~~vAiK~~~~~~------------~~--~l~~E~~il~~L~~~~-~i~~~~~~~~~-----~~~~~ 78 (473)
....|+.+. -.|+.|.||...... .+ ...+|...+..|.... .++....++.. ....+
T Consensus 34 ~~rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~ 111 (268)
T PRK15123 34 EGRRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSF 111 (268)
T ss_pred CCceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeE
Confidence 334455654 357789999632222 11 3678999998885221 12222334432 23468
Q ss_pred EEEecCCC--CHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEee----CCCCCcEEEEecCC
Q 011988 79 LVIDLLGP--SLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL----GRRANQVYIIDFGL 151 (473)
Q Consensus 79 lv~e~~g~--sL~~~l~~~-~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~----~~~~~~vkL~DFGl 151 (473)
||+|++++ +|.+++... ....+......++.+|+..+.-||..||+|+|+++.|||+.. .+....+.|+||+.
T Consensus 112 LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 112 IITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred EEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 99999955 799998632 345667788899999999999999999999999999999963 12357899999998
Q ss_pred cc
Q 011988 152 AK 153 (473)
Q Consensus 152 a~ 153 (473)
+.
T Consensus 192 ~~ 193 (268)
T PRK15123 192 AQ 193 (268)
T ss_pred cc
Confidence 85
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.96 E-value=3.1e-09 Score=97.85 Aligned_cols=124 Identities=24% Similarity=0.351 Sum_probs=78.7
Q ss_pred EEEEEEEcCCCcEEEEEEcccCC-----------------------------chhHHHHHHHHHHhcCCC-CCCeeEEee
Q 011988 22 EIYLGTNIQTNEEVAIKLNVKTK-----------------------------HPQLQYEAKLYKILQGGT-GIPNLRWFG 71 (473)
Q Consensus 22 ~Vy~a~~~~~~~~vAiK~~~~~~-----------------------------~~~l~~E~~il~~L~~~~-~i~~~~~~~ 71 (473)
.||.|.. ..|..||||+..... .....+|.+.|..+.... .+|.+..+
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 4899986 567899999722110 012567999999998553 35555433
Q ss_pred EeCCeEEEEEecCC--CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH-HHhCCCcccCCCCCcEEEeeCCCCCcEEEEe
Q 011988 72 VEGDYNVLVIDLLG--PSLEDLFNFCSRKLSLKTVLMLADQMINRVEF-VHSKSFLHRDIKPDNFLMGLGRRANQVYIID 148 (473)
Q Consensus 72 ~~~~~~~lv~e~~g--~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~y-LH~~gIvHrDIKP~NILl~~~~~~~~vkL~D 148 (473)
. ..+|||||++ +.....+... .++......++.+++..+.. +|..||||+||.+.|||++ .+.++|+|
T Consensus 79 -~--~~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~----~~~~~iID 149 (188)
T PF01163_consen 79 -N--RNVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD----DGKVYIID 149 (188)
T ss_dssp -E--TTEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE----TTCEEE--
T ss_pred -e--CCEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee----cceEEEEe
Confidence 2 3479999997 5333333311 12245567788888886665 5799999999999999995 34899999
Q ss_pred cCCccccc
Q 011988 149 FGLAKRYR 156 (473)
Q Consensus 149 FGla~~~~ 156 (473)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99986543
No 450
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.85 E-value=1.6e-09 Score=114.07 Aligned_cols=154 Identities=13% Similarity=0.189 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccccccc--CCCcccCccccccccc
Q 011988 108 ADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRE--NKNLTGTARYASMNTH 184 (473)
Q Consensus 108 ~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~--~~~~~Gt~~Y~APE~~ 184 (473)
+.+++.||.|+|. .++||++|.|++|.+ +..+.+||+.|+++.............|.. .....-...|.|||++
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 3455599999995 689999999999999 588999999999987554422211111111 1122345679999999
Q ss_pred cCCCCCchhhHHHHHHHHHHHH-cCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCC
Q 011988 185 LGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKP 263 (473)
Q Consensus 185 ~~~~~s~ksDVwSlGviL~ell-tG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RP 263 (473)
.+...+.++|+|||||++|.+. .|+.-+.......... . ...............+|+|+.+-+.+++..+..-||
T Consensus 182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~---~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp 257 (700)
T KOG2137|consen 182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-F---SRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRP 257 (700)
T ss_pred ccccccccccceeeeeEEEEEecCCcchhhccCCcchhh-h---hhcccccccccccccCcHHHHHHHHHHhcCCcccCc
Confidence 9988899999999999999998 4555554432211111 1 111111111122257899999999999999999999
Q ss_pred CHHHH
Q 011988 264 DYAYL 268 (473)
Q Consensus 264 t~~~l 268 (473)
++.++
T Consensus 258 ~~~~l 262 (700)
T KOG2137|consen 258 TLDLL 262 (700)
T ss_pred chhhh
Confidence 76554
No 451
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.76 E-value=1.3e-07 Score=88.83 Aligned_cols=109 Identities=20% Similarity=0.295 Sum_probs=81.5
Q ss_pred chhHHHHHHHHHHhcCCCCC--CeeEEeeEeC----CeEEEEEecCCC--CHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Q 011988 45 HPQLQYEAKLYKILQGGTGI--PNLRWFGVEG----DYNVLVIDLLGP--SLEDLFNFCSRKLSLKTVLMLADQMINRVE 116 (473)
Q Consensus 45 ~~~l~~E~~il~~L~~~~~i--~~~~~~~~~~----~~~~lv~e~~g~--sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~ 116 (473)
.....+|...+..|.. .+| +....++... ...++++|++.+ +|.+++..... ++......++.+++..+.
T Consensus 55 ~~ra~~E~~~~~~L~~-~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLRE-AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHH-cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHH
Confidence 3457889998888863 233 3334444432 235788998843 79999874332 677788899999999999
Q ss_pred HHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 117 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 117 yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
-||++||+|+|+++.|||+..++....+.|+||+.++..
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999999999999999974444458999999988643
No 452
>PRK09902 hypothetical protein; Provisional
Probab=98.71 E-value=5.7e-07 Score=83.74 Aligned_cols=136 Identities=12% Similarity=0.090 Sum_probs=98.3
Q ss_pred eecCceEEEEEEEcCCCcEEEEEEcc---------cCCchhHHHHHHHHHHhcCCCC-CCeeEEeeEe----CCeEEEEE
Q 011988 16 GSGSFGEIYLGTNIQTNEEVAIKLNV---------KTKHPQLQYEAKLYKILQGGTG-IPNLRWFGVE----GDYNVLVI 81 (473)
Q Consensus 16 G~G~fG~Vy~a~~~~~~~~vAiK~~~---------~~~~~~l~~E~~il~~L~~~~~-i~~~~~~~~~----~~~~~lv~ 81 (473)
|.||.+-|+.... .|+.+-||... .-..+.+.+|...++.|..... ++.+.++... .-..+||+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 6688888998763 34467888622 2245679999999999973322 3333433322 12357888
Q ss_pred ecCC--CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCccc
Q 011988 82 DLLG--PSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 82 e~~g--~sL~~~l~~~~-~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
|-++ .+|.+++.... .+.+......++.+|+..|.-||+.|+.|+|+-+.|||+..+ ....|+++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE-GKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC-CCeeEEEEEhhccch
Confidence 9886 69999876322 246777888999999999999999999999999999999522 123499999987764
No 453
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.69 E-value=1.2e-06 Score=89.93 Aligned_cols=208 Identities=18% Similarity=0.193 Sum_probs=142.0
Q ss_pred ceEEEEEEEcCCCcEEEEEEcccC---CchhHHHHHHHHHHhcCCCCCCeeEEee---EeCCeEEEEEecC--CCCHHHH
Q 011988 20 FGEIYLGTNIQTNEEVAIKLNVKT---KHPQLQYEAKLYKILQGGTGIPNLRWFG---VEGDYNVLVIDLL--GPSLEDL 91 (473)
Q Consensus 20 fG~Vy~a~~~~~~~~vAiK~~~~~---~~~~l~~E~~il~~L~~~~~i~~~~~~~---~~~~~~~lv~e~~--g~sL~~~ 91 (473)
-.+.|++....+|..|++|.+... .......-++.++++.|.+.|+.-..|. ..+...++|++|. .++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 347799999999999999986221 1112345577889999887776654443 2345678999998 5578777
Q ss_pred HHHc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 92 FNFC--------------SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 92 l~~~--------------~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
.-.. +.+.++..+|.++.||..||.++|+.|+.-+-|.|.+||++ ....++|..-|+...+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~---G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT---GKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee---CcceEEEecccceeeecC
Confidence 5211 23478899999999999999999999999999999999995 444788877776654433
Q ss_pred CCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCC-CCCCCCCCHHHHHHHHhhccccccH
Q 011988 158 TATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTKKQKYEKISEKKVSTSI 236 (473)
Q Consensus 158 ~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~P-f~~~~~~~~~~~~~~i~~~~~~~~~ 236 (473)
+.+ |.+. .-.+-|.=.||.+++.|.+|..- |.... .+.. .+
T Consensus 446 d~~---------------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~----~~~s----------~~ 487 (655)
T KOG3741|consen 446 DPT---------------------EPLE---SQQQNDLRDLGLLLLALATGTENSNRTDS----TQSS----------HL 487 (655)
T ss_pred CCC---------------------cchh---HHhhhhHHHHHHHHHHHhhcccccccccc----hHHH----------HH
Confidence 210 1111 12357999999999999998543 22111 1111 12
Q ss_pred HHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHH
Q 011988 237 EALCRGYPTEFASYFHYCRSLRFDDKPDYAYLK 269 (473)
Q Consensus 237 ~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~ 269 (473)
..+...++.++++++.+....++++ -+..+|.
T Consensus 488 ~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~ll 519 (655)
T KOG3741|consen 488 TRITTTYSTDLRNVVEYLESLNFRE-KSIQDLL 519 (655)
T ss_pred HHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHH
Confidence 2344566788888888888888886 3444443
No 454
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.63 E-value=3.5e-07 Score=85.46 Aligned_cols=136 Identities=18% Similarity=0.243 Sum_probs=89.9
Q ss_pred CccCCceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCc------------hhHHHHHHHHHHhc--CCCCCCeeE
Q 011988 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH------------PQLQYEAKLYKILQ--GGTGIPNLR 68 (473)
Q Consensus 3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~------------~~l~~E~~il~~L~--~~~~i~~~~ 68 (473)
..+.++|.+.+.+-......|.+.. -+|+.+++|....... +...+++..+..+. +......+.
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y 104 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY 104 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence 4567889999999998888777776 5678999997333221 11223333333443 122222211
Q ss_pred EeeE-----eCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCC
Q 011988 69 WFGV-----EGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN 142 (473)
Q Consensus 69 ~~~~-----~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~ 142 (473)
.+.. .....+++|||+ |..|.++.. +++ .+...|.++|.-||+.|++|+|+.|.||+++ ++
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~~ 171 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----NN 171 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----CC
Confidence 1111 223457899999 666766543 222 2456677889999999999999999999994 45
Q ss_pred cEEEEecCCcc
Q 011988 143 QVYIIDFGLAK 153 (473)
Q Consensus 143 ~vkL~DFGla~ 153 (473)
.++++||+..+
T Consensus 172 ~i~iID~~~k~ 182 (229)
T PF06176_consen 172 GIRIIDTQGKR 182 (229)
T ss_pred cEEEEECcccc
Confidence 69999998765
No 455
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.61 E-value=2.4e-07 Score=88.43 Aligned_cols=132 Identities=19% Similarity=0.322 Sum_probs=95.4
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-----------------C--------chhHHHHHHHHHHhcCC-C
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-----------------K--------HPQLQYEAKLYKILQGG-T 62 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-----------------~--------~~~l~~E~~il~~L~~~-~ 62 (473)
+.+..+||-|--+.||.|.+ ..|.++|||+-... . ....++|.++|+.|... -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 45678999999999999996 47889999961110 0 11256899999999744 2
Q ss_pred CCCeeEEeeEeCCeEEEEEecCCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCC
Q 011988 63 GIPNLRWFGVEGDYNVLVIDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 141 (473)
Q Consensus 63 ~i~~~~~~~~~~~~~~lv~e~~g~-sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 141 (473)
.|+.. ...+..++|||+..+ -|..+ +++.+..-.|+..|+.-+.-+-..||||+|+.+=|||++ ++
T Consensus 172 ~VP~P----~~~nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~---~d 238 (304)
T COG0478 172 KVPKP----IAWNRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT---ED 238 (304)
T ss_pred CCCCc----cccccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe---cC
Confidence 34433 234567899999955 33222 224555666777777777777799999999999999995 77
Q ss_pred CcEEEEecCCccc
Q 011988 142 NQVYIIDFGLAKR 154 (473)
Q Consensus 142 ~~vkL~DFGla~~ 154 (473)
+.++++||=-+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 8999999977653
No 456
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.54 E-value=5.3e-07 Score=95.14 Aligned_cols=139 Identities=19% Similarity=0.289 Sum_probs=92.7
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCCchh-------------------------------------------HH
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQ-------------------------------------------LQ 49 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~-------------------------------------------l~ 49 (473)
.-|+.++-|+||.|+. .+|+.||||+....-.+. +.
T Consensus 131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 4688999999999996 569999999844432221 23
Q ss_pred HHHHHHHHhc----CCCCCCeeEEeeEeCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 011988 50 YEAKLYKILQ----GGTGIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124 (473)
Q Consensus 50 ~E~~il~~L~----~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIv 124 (473)
+|...+..+. +.+.+..-..|-.-....+|+|||+ |-.+.++.......++.+.+...+.++. +..+-..|++
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~dgff 287 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRDGFF 287 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCcc
Confidence 3444444432 3333433344444456679999999 6677777433334566554444333332 3444458999
Q ss_pred ccCCCCCcEEEeeCCCCCcEEEEecCCcccccC
Q 011988 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 125 HrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 157 (473)
|.|..|.||++. .++.+.+.|||+...+..
T Consensus 288 HaDpHpGNi~v~---~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 288 HADPHPGNILVR---SDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ccCCCccceEEe---cCCcEEEEcCcceecCCH
Confidence 999999999994 679999999999876654
No 457
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.51 E-value=7.2e-07 Score=80.01 Aligned_cols=126 Identities=25% Similarity=0.394 Sum_probs=93.8
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEE-cccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCCH
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKL-NVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSL 88 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~-~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL 88 (473)
+.+.|++|.+|.||+|.+ .|..+|+|+ ........++.|+++|..++....-+.++.|+.+. +.|||. |..|
T Consensus 26 v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~----i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGEDF----IRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechhh----hhhhhhcCcch
Confidence 457899999999999985 566899998 44455677999999999999998889888876553 449999 5588
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCC--CcEEEeeCCCCCcEEEEecCCccc
Q 011988 89 EDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKP--DNFLMGLGRRANQVYIIDFGLAKR 154 (473)
Q Consensus 89 ~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP--~NILl~~~~~~~~vkL~DFGla~~ 154 (473)
.++... .+-+.+ ..+++.---|-..||-|..|.- .||++ .++.+.|+||..|+.
T Consensus 100 ~~~~~~----~~rk~l----~~vlE~a~~LD~~GI~H~El~~~~k~vlv----~~~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIG----GDRKHL----LRVLEKAYKLDRLGIEHGELSRPWKNVLV----NDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhc----ccHHHH----HHHHHHHHHHHHhccchhhhcCCceeEEe----cCCcEEEEEccchhh
Confidence 777552 123333 3344444445668999998864 46666 345899999999873
No 458
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.51 E-value=1.2e-06 Score=82.77 Aligned_cols=135 Identities=20% Similarity=0.236 Sum_probs=90.5
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccCC----------------------chh-----HHHHHHHHHHhcCCCCC
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK----------------------HPQ-----LQYEAKLYKILQGGTGI 64 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~----------------------~~~-----l~~E~~il~~L~~~~~i 64 (473)
...|.+|--+.||+|.. .++..||||+..... ..+ ..+|...|+++... +|
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA-GV 130 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA-GV 130 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 34566777779999984 568899999732211 001 24577777777522 22
Q ss_pred CeeEEeeEeCCeEEEEEecCCCCHH--HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCC
Q 011988 65 PNLRWFGVEGDYNVLVIDLLGPSLE--DLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRA 141 (473)
Q Consensus 65 ~~~~~~~~~~~~~~lv~e~~g~sL~--~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~ 141 (473)
....-+. -...+|+|||+|.... -.|+ .-.+...++..+..++++.+.-|-. .++||+||..=|||+. .
T Consensus 131 rvP~Pi~--~~~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~----~ 202 (268)
T COG1718 131 RVPEPIA--FRNNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH----D 202 (268)
T ss_pred CCCCcee--ecCCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE----C
Confidence 2221111 1345899999976511 0111 1123444788889999999998887 9999999999999993 7
Q ss_pred CcEEEEecCCccccc
Q 011988 142 NQVYIIDFGLAKRYR 156 (473)
Q Consensus 142 ~~vkL~DFGla~~~~ 156 (473)
+.++|+|||-|....
T Consensus 203 ~~p~iID~~QaV~~~ 217 (268)
T COG1718 203 GEPYIIDVSQAVTID 217 (268)
T ss_pred CeEEEEECccccccC
Confidence 889999999987544
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.48 E-value=3e-06 Score=80.71 Aligned_cols=70 Identities=17% Similarity=0.125 Sum_probs=53.8
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC-CchhHHHHHHHHHHhcCCCC-CCeeEEeeEeCCeEEEEEecCCC
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-KHPQLQYEAKLYKILQGGTG-IPNLRWFGVEGDYNVLVIDLLGP 86 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-~~~~l~~E~~il~~L~~~~~-i~~~~~~~~~~~~~~lv~e~~g~ 86 (473)
..||.|..+.||+. .+..+++|+.... ....+.+|.++++.+..... ++.+..++.......++|+++.|
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 57899999999984 2456789985442 34568899999999986555 67777787777778899999955
No 460
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.36 E-value=6.4e-06 Score=79.12 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=52.6
Q ss_pred EeecCc-eEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC-CCCHHH
Q 011988 15 IGSGSF-GEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL-GPSLED 90 (473)
Q Consensus 15 LG~G~f-G~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~ 90 (473)
|-.|.. ..||+... .+..++||+........+..|+++++.|...-.++.+..++......+++|+++ |.+|..
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 444544 78999874 346889998554434568899999999986655666766666666678999998 555543
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.34 E-value=7e-06 Score=77.38 Aligned_cols=138 Identities=19% Similarity=0.278 Sum_probs=80.3
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccC-CchhHHHHHHHHHHhcCCCC-CCeeEEee---EeCCeEEEEEecC-C
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-KHPQLQYEAKLYKILQGGTG-IPNLRWFG---VEGDYNVLVIDLL-G 85 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-~~~~l~~E~~il~~L~~~~~-i~~~~~~~---~~~~~~~lv~e~~-g 85 (473)
++.|+.|..+.||++.... ..+++|+.... ....+..|..+++.|..... ++.+..+. ......+++|+++ |
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 5789999999999998643 58999985444 44568899999999985544 55555533 3344578899998 5
Q ss_pred CCHHH----------------HHH---HcC---CCCCHHH------HHHH---------------HHHHHH-HHHHHH--
Q 011988 86 PSLED----------------LFN---FCS---RKLSLKT------VLML---------------ADQMIN-RVEFVH-- 119 (473)
Q Consensus 86 ~sL~~----------------~l~---~~~---~~ls~~~------~~~i---------------~~qi~~-aL~yLH-- 119 (473)
..+.. .+. ... ..+.... ...+ ...+.. .+..++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 55555 111 110 0111000 0000 111222 233333
Q ss_pred -----hCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 120 -----SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 120 -----~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
...++|+|+.|.|||++ +.++.+.|+||+.+.
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~--~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVD--PSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEE--SSTTEEEE--GTT-E
T ss_pred hccCCCcEEEEeccccccceee--eccceeEEEecccce
Confidence 24599999999999995 356667899999874
No 462
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.24 E-value=3.7e-05 Score=71.45 Aligned_cols=132 Identities=21% Similarity=0.300 Sum_probs=94.0
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-------------------chhHHHHHHHHHHhc-C----CCCCCee
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-------------------HPQLQYEAKLYKILQ-G----GTGIPNL 67 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-------------------~~~l~~E~~il~~L~-~----~~~i~~~ 67 (473)
...||.|+.-.||.- ..+...+||+..... ..+..+|+..+..+. . ..+|+.+
T Consensus 6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 356899999999964 244556889865555 567788888888777 3 3356666
Q ss_pred EEeeEeCCeEEEEEecC-------CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCC
Q 011988 68 RWFGVEGDYNVLVIDLL-------GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 68 ~~~~~~~~~~~lv~e~~-------g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~ 140 (473)
+++...+....+|+|.. ..+|.+++. ...++. .+... +-+-..||-+.+|+.+||+|.||++...++
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~--~~~~~~-~~~~~---L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLK--EGGLTE-ELRQA---LDEFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHH--cCCccH-HHHHH---HHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 67767777778888865 458888886 334655 33333 334457888999999999999999987655
Q ss_pred CC-cEEEEe-cCCc
Q 011988 141 AN-QVYIID-FGLA 152 (473)
Q Consensus 141 ~~-~vkL~D-FGla 152 (473)
.. .+.|+| ||..
T Consensus 157 ~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 157 GEFRLVLIDGLGEK 170 (199)
T ss_pred CceEEEEEeCCCCc
Confidence 55 788888 4543
No 463
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.15 E-value=1.6e-05 Score=83.79 Aligned_cols=142 Identities=19% Similarity=0.232 Sum_probs=89.7
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccCCch----------------------------------------hHHHHH
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHP----------------------------------------QLQYEA 52 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~----------------------------------------~l~~E~ 52 (473)
+-||.-+.|+||+|+- .+|+.||||+....-.. ++..|+
T Consensus 167 ~piaaASlaQVhrA~L-~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARL-KNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEe-cCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 5689999999999996 45999999984332111 122333
Q ss_pred HHHHH----hcCCCC---CCeeEEeeEeCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 011988 53 KLYKI----LQGGTG---IPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124 (473)
Q Consensus 53 ~il~~----L~~~~~---i~~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIv 124 (473)
+.... +.+-.. |.....|.......+|+|||+ |.-+.|+-.-....++...+..-+.++.. +-|=..|++
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~--~qIf~~Gff 323 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL--EQIFKTGFF 323 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH--HHHHhcCCc
Confidence 33222 222221 112223334445679999999 55555553333456777765555544433 334457899
Q ss_pred ccCCCCCcEEEeeC-CCCCcEEEEecCCcccccC
Q 011988 125 HRDIKPDNFLMGLG-RRANQVYIIDFGLAKRYRD 157 (473)
Q Consensus 125 HrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~ 157 (473)
|+|=.|.||++..+ .....+.|.|||+...+..
T Consensus 324 HaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 324 HADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred cCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 99999999999632 2467899999999986654
No 464
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.10 E-value=5e-07 Score=94.71 Aligned_cols=186 Identities=13% Similarity=0.046 Sum_probs=134.5
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCCCC-
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPS- 87 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g~s- 87 (473)
|.....+++|+++.+++.+...+...+ .+++... .....++++|.++++++-...+..-+..+.+.+++|+++++.
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~r 320 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGR 320 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCc
Confidence 445566789999999999876555544 6664433 445678889999998873333333344567789999999443
Q ss_pred -HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCcccccc
Q 011988 88 -LEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPY 166 (473)
Q Consensus 88 -L~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~ 166 (473)
.........-.|..-+...+...-+.+|++||+.-=+|+| ||+. ..+..++.||+....+....
T Consensus 321 s~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~----s~~~~~~~~~~v~~~L~~~~------- 385 (829)
T KOG0576|consen 321 SSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG----SEEEVKLLDFAVPPQLTRTM------- 385 (829)
T ss_pred cccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccc----cccccccccccCCcccCccc-------
Confidence 2222211111244455666777778899999998778999 8887 45789999999988776543
Q ss_pred ccCCCcccCccccccccccCCCCCchhhHHHHHHHHHHHHcCCCCCC
Q 011988 167 RENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 213 (473)
Q Consensus 167 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~ 213 (473)
....+.+|+.++|||+..+..+....|+|++|+-..++.-|..|-.
T Consensus 386 -~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 -KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred -ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 2356789999999999999999999999999988888887877754
No 465
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.00 E-value=9.7e-05 Score=68.43 Aligned_cols=123 Identities=18% Similarity=0.267 Sum_probs=84.0
Q ss_pred CceEEEeeEeecCc-eEEEEEEEcCCCcEEEEEEccc-----C-------------------CchhHHHHHHHHHHhcCC
Q 011988 7 NKFRLGRKIGSGSF-GEIYLGTNIQTNEEVAIKLNVK-----T-------------------KHPQLQYEAKLYKILQGG 61 (473)
Q Consensus 7 ~~y~i~~~LG~G~f-G~Vy~a~~~~~~~~vAiK~~~~-----~-------------------~~~~l~~E~~il~~L~~~ 61 (473)
.+++.++.||.|.- |.||+++ ..|+.+|||+... . ....|..|.+.+-+|+..
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 68999999999999 9999998 4788999998111 0 012367788888888744
Q ss_pred CC-----CCeeEEeeEeC-----------------CeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Q 011988 62 TG-----IPNLRWFGVEG-----------------DYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 119 (473)
Q Consensus 62 ~~-----i~~~~~~~~~~-----------------~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH 119 (473)
.. +..+.++.... ....||.||....- .+.. .-+.+|..-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHHH
Confidence 33 33333332221 12356666552211 1222 33467778889999
Q ss_pred hCCCcccCCCCCcEEEeeCCCCCcEEEEecCCc
Q 011988 120 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 152 (473)
Q Consensus 120 ~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 152 (473)
..||+-+|+|+.|..= -||+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~~--------G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYRG--------GKLVDFSSS 206 (207)
T ss_pred HCCeeeccCccccccC--------CEEEecccC
Confidence 9999999999999863 279999975
No 466
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.92 E-value=0.0025 Score=65.62 Aligned_cols=72 Identities=19% Similarity=0.331 Sum_probs=50.8
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEccc----------CCchhHHHHHHHHHHhcC--CCCCCeeEEeeEeCCeEEE
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVK----------TKHPQLQYEAKLYKILQG--GTGIPNLRWFGVEGDYNVL 79 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~----------~~~~~l~~E~~il~~L~~--~~~i~~~~~~~~~~~~~~l 79 (473)
.+.||.|.+..||++.+...++.|+||.... ........|.+.|+.+.. +..+|.+..+. .+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCCCEE
Confidence 4678999999999999754446899997321 123346778888888753 24567666654 455789
Q ss_pred EEecCC
Q 011988 80 VIDLLG 85 (473)
Q Consensus 80 v~e~~g 85 (473)
|||++.
T Consensus 109 VME~L~ 114 (401)
T PRK09550 109 VMEDLS 114 (401)
T ss_pred EEecCC
Confidence 999984
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.89 E-value=7.6e-05 Score=71.34 Aligned_cols=67 Identities=16% Similarity=0.185 Sum_probs=42.3
Q ss_pred eeEeecCce-EEEEEEEcCCCcEEEEEEcccC-CchhHHHHHHHHHHhcCCC--CCCeeEEeeEeC---CeEEEEEecC
Q 011988 13 RKIGSGSFG-EIYLGTNIQTNEEVAIKLNVKT-KHPQLQYEAKLYKILQGGT--GIPNLRWFGVEG---DYNVLVIDLL 84 (473)
Q Consensus 13 ~~LG~G~fG-~Vy~a~~~~~~~~vAiK~~~~~-~~~~l~~E~~il~~L~~~~--~i~~~~~~~~~~---~~~~lv~e~~ 84 (473)
+.|+.|+.. .||+.. ..+++|+.... ....+..|.+++..|.... -++.+...+... ...+++|+++
T Consensus 3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRLG-----DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEcC-----CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 567777776 489752 35788985443 2346899999999997532 244444333332 2347889987
No 468
>PLN02876 acyl-CoA dehydrogenase
Probab=97.88 E-value=0.00016 Score=81.73 Aligned_cols=76 Identities=11% Similarity=0.165 Sum_probs=51.0
Q ss_pred EEeeEeecCceEEEEEEEcCCC--cEEEEEEcccC----CchhHHHHHHHHHHhcCCCCC--CeeEEeeEeC---CeEEE
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTN--EEVAIKLNVKT----KHPQLQYEAKLYKILQGGTGI--PNLRWFGVEG---DYNVL 79 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~--~~vAiK~~~~~----~~~~l~~E~~il~~L~~~~~i--~~~~~~~~~~---~~~~l 79 (473)
-++.|+.|.+..+|+......+ ..+++|+.... ....+.+|.++++.|..+..+ +.+..++.+. ...|+
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 3677899999999998764332 46778874332 224688999999999744444 4444444432 35689
Q ss_pred EEecCCC
Q 011988 80 VIDLLGP 86 (473)
Q Consensus 80 v~e~~g~ 86 (473)
|||++.+
T Consensus 122 VME~v~G 128 (822)
T PLN02876 122 IMEYLEG 128 (822)
T ss_pred EEEecCC
Confidence 9999844
No 469
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.80 E-value=0.00019 Score=71.66 Aligned_cols=137 Identities=23% Similarity=0.287 Sum_probs=96.8
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEEcccCC-----c------------------hh------HHHHHHHHHHhcCC
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTK-----H------------------PQ------LQYEAKLYKILQGG 61 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~-----~------------------~~------l~~E~~il~~L~~~ 61 (473)
|-..|..|--+.||.|. ..+|..+|||+..... . +. .+.|++.|++|...
T Consensus 148 inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 45678889999999998 4678889999733210 0 00 35788888888733
Q ss_pred CCCCeeEEeeEeCCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccCCCCCcEEEeeCCC
Q 011988 62 TGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGLGRR 140 (473)
Q Consensus 62 ~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~~~~ 140 (473)
+|+...-+.. ...+|||+|+|.+-+-.-....-.++...+..+-.|++.-+.-|. .+++||.||.-=|+|+ .
T Consensus 227 -GIP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly----h 299 (520)
T KOG2270|consen 227 -GIPCPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY----H 299 (520)
T ss_pred -CCCCCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE----E
Confidence 3444322222 234899999976543322212345777788888888888887775 5899999999999999 5
Q ss_pred CCcEEEEecCCcccc
Q 011988 141 ANQVYIIDFGLAKRY 155 (473)
Q Consensus 141 ~~~vkL~DFGla~~~ 155 (473)
.|.++|+|-+-+...
T Consensus 300 dG~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 300 DGKLYIIDVSQSVEH 314 (520)
T ss_pred CCEEEEEEccccccC
Confidence 799999999987644
No 470
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.72 E-value=0.0037 Score=63.22 Aligned_cols=69 Identities=12% Similarity=0.204 Sum_probs=46.1
Q ss_pred eEeecCceEEEEEEEcCCCcEEEEEEcc---c-------CCchhHHHHHHHHHHhcC--CCCCCeeEEeeEeCCeEEEEE
Q 011988 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNV---K-------TKHPQLQYEAKLYKILQG--GTGIPNLRWFGVEGDYNVLVI 81 (473)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAiK~~~---~-------~~~~~l~~E~~il~~L~~--~~~i~~~~~~~~~~~~~~lv~ 81 (473)
.||.|....||++.+...++.|+||.-. . -.......|...|+.+.. +..++.++ ..+.+..+++|
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy--~~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF--HFDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE--EEccccceehH
Confidence 5799999999999975444689999611 1 112345678888877653 23455554 44556667899
Q ss_pred ecC
Q 011988 82 DLL 84 (473)
Q Consensus 82 e~~ 84 (473)
|++
T Consensus 80 EdL 82 (370)
T TIGR01767 80 EDL 82 (370)
T ss_pred hhC
Confidence 987
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.61 E-value=0.00093 Score=63.56 Aligned_cols=69 Identities=14% Similarity=0.156 Sum_probs=46.9
Q ss_pred EeeEeecCceEEEEEEEcC-CCcEEEEEEcccCCc--hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 12 GRKIGSGSFGEIYLGTNIQ-TNEEVAIKLNVKTKH--PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~-~~~~vAiK~~~~~~~--~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
++.|..|-...+|++.... .++.|++|+...... -....|..+++.+......+.+..... ..++|||+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i 74 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFI 74 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEee
Confidence 4677888888999997432 357889998543221 234589999999976666666644332 24799988
No 472
>PRK10593 hypothetical protein; Provisional
Probab=97.58 E-value=0.0013 Score=65.29 Aligned_cols=76 Identities=13% Similarity=0.079 Sum_probs=53.2
Q ss_pred ceEEEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-CchhHHHHHHHHHHhcCCC--CCCeeEEeeEe---CCeEEEEE
Q 011988 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-KHPQLQYEAKLYKILQGGT--GIPNLRWFGVE---GDYNVLVI 81 (473)
Q Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-~~~~l~~E~~il~~L~~~~--~i~~~~~~~~~---~~~~~lv~ 81 (473)
.-.-.+.||.|..+.||.... .++ .+++|+.... ....+..|...|+.|.... .++.+..++.. ....+|||
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYD-SQG-NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred hhheeeecCCccceeEEEEEc-CCC-CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 344467899999999999863 223 5777885432 3457899999999998653 35555544432 35579999
Q ss_pred ecCC
Q 011988 82 DLLG 85 (473)
Q Consensus 82 e~~g 85 (473)
|++.
T Consensus 93 E~i~ 96 (297)
T PRK10593 93 ERLR 96 (297)
T ss_pred eccC
Confidence 9984
No 473
>PRK05231 homoserine kinase; Provisional
Probab=97.49 E-value=0.0021 Score=64.30 Aligned_cols=73 Identities=15% Similarity=0.138 Sum_probs=45.1
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCC-CCeeEE------eeEeCCeEEEEEecC
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTG-IPNLRW------FGVEGDYNVLVIDLL 84 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~-i~~~~~------~~~~~~~~~lv~e~~ 84 (473)
.+.|+.|....+|+... ..| .+++|+........+..|..+++.|..... ++.+.. +.......+++++++
T Consensus 27 ~~~l~~G~~n~~y~v~t-~~g-~~vLK~~~~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l 104 (319)
T PRK05231 27 LKGIAEGIENSNFFLTT-TQG-EYVLTLFERLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL 104 (319)
T ss_pred cchhccccccceEEEEe-CCC-cEEEEEeccCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence 45677787789999874 333 688998653344566778888888863321 222221 122345568899988
Q ss_pred CC
Q 011988 85 GP 86 (473)
Q Consensus 85 g~ 86 (473)
.|
T Consensus 105 ~G 106 (319)
T PRK05231 105 EG 106 (319)
T ss_pred CC
Confidence 43
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.44 E-value=0.00087 Score=64.85 Aligned_cols=130 Identities=17% Similarity=0.152 Sum_probs=76.1
Q ss_pred eEeecCceEEEEEEEcCCCcEEEEEEcccCCc---hhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCCC-CHH
Q 011988 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKH---PQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGP-SLE 89 (473)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~---~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g~-sL~ 89 (473)
.+..|-.+.+|+.. .+++.+++|+...... -....|..+++.+......+.+.++.. .++||+|+.| .+.
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~ 76 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVIT 76 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccc
Confidence 34567788999887 4577889998433221 246789999999986655666554432 3688999833 322
Q ss_pred --------------HHHHHc-C-----CCCCHH-HHHHHHHHH---------HHHHHHHHh--------CCCcccCCCCC
Q 011988 90 --------------DLFNFC-S-----RKLSLK-TVLMLADQM---------INRVEFVHS--------KSFLHRDIKPD 131 (473)
Q Consensus 90 --------------~~l~~~-~-----~~ls~~-~~~~i~~qi---------~~aL~yLH~--------~gIvHrDIKP~ 131 (473)
+.+... . .+++.. .+..+..++ ...+..+-. ..++|+|+.|.
T Consensus 77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~ 156 (256)
T TIGR02721 77 LDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY 156 (256)
T ss_pred cccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence 111111 1 112222 111221111 111222211 25899999999
Q ss_pred cEEEeeCCCCCcEEEEecCCcc
Q 011988 132 NFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 132 NILl~~~~~~~~vkL~DFGla~ 153 (473)
|||++ +++ ++|+||..|.
T Consensus 157 Nil~~---~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 157 NLVVT---PQG-LKLIDWEYAS 174 (256)
T ss_pred cEEEe---CCC-CEEEeccccC
Confidence 99995 333 7899999885
No 475
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.42 E-value=0.00012 Score=71.86 Aligned_cols=131 Identities=21% Similarity=0.360 Sum_probs=90.1
Q ss_pred eEEEeeEeecCceEEEEEEEcCCCcEEEEEE--c-------ccCCc----------------hhHHHHHHHHHHhcCCC-
Q 011988 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--N-------VKTKH----------------PQLQYEAKLYKILQGGT- 62 (473)
Q Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~--~-------~~~~~----------------~~l~~E~~il~~L~~~~- 62 (473)
+.++++||-|--+.||.+-+ ..|.+.++|+ + .+.+. -...+|...|+.|..+.
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 56789999999999999986 5688889995 1 11111 11357888899887432
Q ss_pred CCCeeEEeeEeCCeEEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcEEEeeCCCC
Q 011988 63 GIPNLRWFGVEGDYNVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 141 (473)
Q Consensus 63 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~ 141 (473)
-|+.. .+....++|||++ |..|...-+ ...+-.+...++.-+.-|-.+|+||+|..-=||+|. ++
T Consensus 173 pVPkp----iD~~RH~Vvmelv~g~Pl~~v~~-------v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~---dd 238 (465)
T KOG2268|consen 173 PVPKP----IDHNRHCVVMELVDGYPLRQVRH-------VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVK---DD 238 (465)
T ss_pred CCCCc----ccccceeeHHHhhcccceeeeee-------cCChHHHHHHHHHHHHHHHHcCceecccchheeEEe---cC
Confidence 22222 2345568999988 555554432 112334445555556778889999999999999994 67
Q ss_pred CcEEEEecCCccc
Q 011988 142 NQVYIIDFGLAKR 154 (473)
Q Consensus 142 ~~vkL~DFGla~~ 154 (473)
+.++++||--+..
T Consensus 239 ~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 239 DKIVVIDFPQMVS 251 (465)
T ss_pred CCEEEeechHhhc
Confidence 8899999976543
No 476
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.41 E-value=0.00055 Score=63.19 Aligned_cols=95 Identities=25% Similarity=0.365 Sum_probs=73.0
Q ss_pred HHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCC-CCHH-------HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh
Q 011988 49 QYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLG-PSLE-------DLFNFCSRKLSLKTVLMLADQMINRVEFVHS 120 (473)
Q Consensus 49 ~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g-~sL~-------~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~ 120 (473)
..|.-+++.+++..+++.+. |..++ +++.|+.+ +++. +++ ..++....+|+.++++.+++|+.
T Consensus 7 ~~E~lll~~l~~~~~~pk~l--G~CG~--~~v~E~~~~~~~~~~~~~l~~~~-----~~~w~~R~~iA~~lL~~l~~l~~ 77 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLL--GSCGR--FYVVEYVGAGSLYGIYRPLSQFL-----QSPWEQRAKIALQLLELLEELDH 77 (188)
T ss_pred ccHHHHHHHcCCCCCCCCee--eECCC--EEEEEeecCcccccccccccccc-----ccCHHHHHHHHHHHHHHHHHHhc
Confidence 35888999999877666664 33444 56778875 3443 332 36899999999999999999997
Q ss_pred ---CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 121 ---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 121 ---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
..+.-.|++++||-++ +++.+|++|...+...
T Consensus 78 ~~~~~~~lcDv~~~nfgv~---~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 78 GPLGFFYLCDVSPDNFGVN---DDGRLKLIDLDDVFVE 112 (188)
T ss_pred CCCCcEEEeecchHHeEEe---CCCcEEEEechhcchh
Confidence 3477899999999995 6788999999987644
No 477
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.39 E-value=0.013 Score=59.99 Aligned_cols=71 Identities=18% Similarity=0.314 Sum_probs=48.1
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEc---cc------CCchhHHHHHHHHHHhcC--CCCCCeeEEeeEeCCeEEEE
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLN---VK------TKHPQLQYEAKLYKILQG--GTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~---~~------~~~~~l~~E~~il~~L~~--~~~i~~~~~~~~~~~~~~lv 80 (473)
.+.||.|.-..||++.+...+..|+||.- .+ -.......|..+|+.+.. +..+|.++.| +.+..++|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence 67889999999999997444567999961 11 112345678888887653 3456666544 45556778
Q ss_pred EecC
Q 011988 81 IDLL 84 (473)
Q Consensus 81 ~e~~ 84 (473)
||++
T Consensus 112 MEdL 115 (409)
T PRK12396 112 MEDL 115 (409)
T ss_pred HHhC
Confidence 8876
No 478
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.35 E-value=0.00055 Score=70.97 Aligned_cols=162 Identities=20% Similarity=0.191 Sum_probs=95.4
Q ss_pred chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 011988 45 HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 124 (473)
Q Consensus 45 ~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~gIv 124 (473)
..++.-...+++.++|.+...++..........++|||+++.||++++.... +-..... .+++.
T Consensus 26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s~~--------------~~~~~ 89 (725)
T KOG1093|consen 26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDESLL--------------AHGVL 89 (725)
T ss_pred HHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhhhc--------------ccccc
Confidence 3456677788888986655555544444455589999999999999987432 1111111 22222
Q ss_pred ccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHHHHHH
Q 011988 125 HRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMY 204 (473)
Q Consensus 125 HrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGviL~e 204 (473)
| -|| ++++| -++..+ .. ..++|+|||++|.++.|
T Consensus 90 ~-----~~~----------~~~td-~~~t~~--------------~~----------------~~~pKsdVwsl~~i~~e 123 (725)
T KOG1093|consen 90 H-----LNI----------IYITD-HFLTKY--------------PS----------------PIGPKSDVWSLGFIILE 123 (725)
T ss_pred e-----ehh----------hhccc-cccccC--------------CC----------------CCCcchhhhhHHHHHHH
Confidence 2 222 23344 111100 00 11249999999999999
Q ss_pred HHcCCCCCCCCCCCCHHHHHHHHhhccc---cccHH-HHhcCCcHHHHHHHHHHhcCCCCCCCCHHHH
Q 011988 205 FLRGSLPWQGLKAGTKKQKYEKISEKKV---STSIE-ALCRGYPTEFASYFHYCRSLRFDDKPDYAYL 268 (473)
Q Consensus 205 lltG~~Pf~~~~~~~~~~~~~~i~~~~~---~~~~~-~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l 268 (473)
+..|..-|...........+.+...... ....+ .+...++..+..+...|+-..|..||...++
T Consensus 124 l~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~ 191 (725)
T KOG1093|consen 124 LYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMEL 191 (725)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHH
Confidence 9999988876544333333322221111 01111 1223567888999999999999999876654
No 479
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.31 E-value=0.0021 Score=63.75 Aligned_cols=69 Identities=13% Similarity=0.063 Sum_probs=46.5
Q ss_pred EeeEeecCceEEEEEEEcC------CCcEEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEec
Q 011988 12 GRKIGSGSFGEIYLGTNIQ------TNEEVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDL 83 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~------~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (473)
++.|..|-...||++.... .++.|++|+.... .......|..++..+......+.+..+... .+|++|
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~ 78 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF 78 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence 4556667777999987532 2578999995443 234578899999999866666666555432 356777
Q ss_pred C
Q 011988 84 L 84 (473)
Q Consensus 84 ~ 84 (473)
+
T Consensus 79 i 79 (302)
T cd05156 79 I 79 (302)
T ss_pred e
Confidence 6
No 480
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.30 E-value=0.0029 Score=62.44 Aligned_cols=137 Identities=16% Similarity=0.181 Sum_probs=79.4
Q ss_pred EeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhcCCCC-CCeeEE------eeEeCCeEEEEEecC
Q 011988 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQGGTG-IPNLRW------FGVEGDYNVLVIDLL 84 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~~~~~-i~~~~~------~~~~~~~~~lv~e~~ 84 (473)
.+.|..|....+|+... .+..+++|+........+..|+.++..|..... ++.+.. +....+..+++++++
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i 96 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEKVSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFL 96 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCCCChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence 56777788789999863 345788998655445668889999999864321 222211 112334567889988
Q ss_pred -CCCHH-----------HHHH---HcCCCC----------CHHHH----------HHHHHHHHHHHHHHHh-------CC
Q 011988 85 -GPSLE-----------DLFN---FCSRKL----------SLKTV----------LMLADQMINRVEFVHS-------KS 122 (473)
Q Consensus 85 -g~sL~-----------~~l~---~~~~~l----------s~~~~----------~~i~~qi~~aL~yLH~-------~g 122 (473)
|..+. ..+. .....+ .+... ......+..++.++.. .+
T Consensus 97 ~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (296)
T cd05153 97 AGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRG 176 (296)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCc
Confidence 33321 1111 000001 00000 0011122334444443 47
Q ss_pred CcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 123 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 123 IvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
++|+|+.|.|||++ +.+.+.|+||+.+.
T Consensus 177 l~HgD~~~~Nil~~---~~~~~~iIDfe~a~ 204 (296)
T cd05153 177 VIHADLFRDNVLFD---GDELSGVIDFYFAC 204 (296)
T ss_pred CCccCcCcccEEEe---CCceEEEeehhhhc
Confidence 99999999999995 44556899999874
No 481
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.21 E-value=0.0039 Score=62.05 Aligned_cols=138 Identities=18% Similarity=0.266 Sum_probs=77.8
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEEcccC-CchhHHHHHHHHHHhcCCCC-CCeeEE------eeEeCCeEEEEEe
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-KHPQLQYEAKLYKILQGGTG-IPNLRW------FGVEGDYNVLVID 82 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-~~~~l~~E~~il~~L~~~~~-i~~~~~------~~~~~~~~~lv~e 82 (473)
-++.|+.|....+|++.. .++ .+++|+.... ....+..|..++..|..... ++.+.. +.......+++++
T Consensus 26 ~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e 103 (307)
T TIGR00938 26 SLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE 103 (307)
T ss_pred eccccCCccccceEEEEe-CCC-cEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence 356677777789999863 334 6778985442 23457788888888863321 222211 1122445688999
Q ss_pred cCCC-C-----HH------HHHH---HcCCCC--------CHHH---HH------------HHHHHHHHHHHHHHh----
Q 011988 83 LLGP-S-----LE------DLFN---FCSRKL--------SLKT---VL------------MLADQMINRVEFVHS---- 120 (473)
Q Consensus 83 ~~g~-s-----L~------~~l~---~~~~~l--------s~~~---~~------------~i~~qi~~aL~yLH~---- 120 (473)
++.| . .. ..+. .....+ .... .. .....+...++++..
T Consensus 104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~ 183 (307)
T TIGR00938 104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR 183 (307)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence 8733 1 11 1111 001111 0000 00 001123334555542
Q ss_pred ---CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 121 ---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 121 ---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
.++||+|+.+.||+++ .++.+.|+||+.+.
T Consensus 184 ~~~~~l~HgD~~~~Nvl~~---~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 184 DLPRGVIHADLFPDNVLFD---GDSVKGVIDFYFAC 216 (307)
T ss_pred cCCCccCCCCCCcCcEEEE---CCceEEEeeccccc
Confidence 6899999999999995 44556899999874
No 482
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.20 E-value=0.0017 Score=73.04 Aligned_cols=202 Identities=16% Similarity=0.142 Sum_probs=125.5
Q ss_pred HHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEE----ecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 011988 48 LQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVI----DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 122 (473)
Q Consensus 48 l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~----e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~~g 122 (473)
.+.|...+..+.|.+... +..|+.+....-+++ ++| ..++...+. .-..++..+++.+..++++||.|+|+..
T Consensus 229 ~E~e~~~l~k~~~~n~~~-~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q-~v~~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGG-YFVYGLERLFRGIVLDVLQEICSKVELRSLLQ-SVGSIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHHhhccccccc-eeEEeehhhcchHHHHHHHhhcCccchHHHHh-hccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 455666777777555444 444444433332333 344 556666665 3446889999999999999999999985
Q ss_pred CcccCCCCCcEEEeeCCCCCcEEEE--ecCCcccccCCCCccccccccCCCcccCccccccccccCCCCC--chhhHHHH
Q 011988 123 FLHRDIKPDNFLMGLGRRANQVYII--DFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQS--RRDDLESL 198 (473)
Q Consensus 123 IvHrDIKP~NILl~~~~~~~~vkL~--DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s--~ksDVwSl 198 (473)
..|.-|...-..-...+..+.+.+. ||+..+.+.+.... ....-+..|.++|......+. ...|+|.+
T Consensus 307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~--------~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS--------FSDLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred cceeEEecccccccccCccceeecchhhhcccccCCCcccc--------hhhcCccccccccccccccchhhhhhHHHHH
Confidence 5554443331111112344556655 99888877654321 122345567788877766554 44799999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 011988 199 GYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIR 278 (473)
Q Consensus 199 GviL~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dp~~RPt~~~l~~~L~~l~~~ 278 (473)
|..+..+..|..+-.... ....-++..+..+..+....|+.-+.++|+...++ +.+.|.+
T Consensus 379 gll~~~~~~~~~i~~~~~-----------------~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~l---l~~~f~~ 438 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKSA-----------------VPVSLLDVLSTSELLDALPKCLDEDSEERLSALEL---LTHPFLR 438 (1351)
T ss_pred HHHHhhhhhcCccccccc-----------------chhhhhccccchhhhhhhhhhcchhhhhccchhhh---hhchhcc
Confidence 999999988765532110 00111112223378889999999999999997766 5555554
Q ss_pred h
Q 011988 279 E 279 (473)
Q Consensus 279 ~ 279 (473)
.
T Consensus 439 ~ 439 (1351)
T KOG1035|consen 439 F 439 (1351)
T ss_pred c
Confidence 4
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.12 E-value=0.0027 Score=62.34 Aligned_cols=30 Identities=30% Similarity=0.517 Sum_probs=23.7
Q ss_pred CCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 122 gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
.++|+|+.|.|||++ ++....-|+||+.+.
T Consensus 186 ~lvHGD~~~~Nilv~--~~~~~~gviDWe~a~ 215 (276)
T cd05152 186 VLVHGDLHPGHILID--EDARVTGLIDWTEAK 215 (276)
T ss_pred eeEeCCCCCCcEEEe--CCCCEEEEECcHhcc
Confidence 489999999999995 223345699999885
No 484
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.07 E-value=0.00012 Score=83.87 Aligned_cols=152 Identities=11% Similarity=-0.055 Sum_probs=106.1
Q ss_pred HHHHHHHhcCCCCCCeeEEe-eEeCCeEEEEEecC-CCCHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhC----
Q 011988 51 EAKLYKILQGGTGIPNLRWF-GVEGDYNVLVIDLL-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK---- 121 (473)
Q Consensus 51 E~~il~~L~~~~~i~~~~~~-~~~~~~~~lv~e~~-g~sL~~~l~~~~~---~ls~~~~~~i~~qi~~aL~yLH~~---- 121 (473)
|...++.+.|......+.-. ..+....+.+++++ +|.+.+.+-..-. .++..-+.....+.+.+..-+|+.
T Consensus 1279 e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg 1358 (2724)
T KOG1826|consen 1279 ERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLG 1358 (2724)
T ss_pred hhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCC
Confidence 43444445544333322211 22444557888888 8888888764322 244444555555547778887753
Q ss_pred -CCcccCCCCCcEEEeeCCCCCcEEEEecCCcccccCCCCccccccccCCCcccCccccccccccCCCCCchhhHHHHHH
Q 011988 122 -SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRYRDTATHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGY 200 (473)
Q Consensus 122 -gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~p~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGv 200 (473)
--+|++||+-|.+|. .+..+|+.++|+.+....... ......+++.|+++++.....++.++|+|..|+
T Consensus 1359 ~T~v~~~Lkf~lpmIV---tny~v~~gk~gLdKIknp~~s-------f~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~ 1428 (2724)
T KOG1826|consen 1359 NTNVSKSLKFTLPMIV---TNYNVKLGKGGLDKIKNPVLS-------FFGLELCSPIYVLQLIKNEIKFTKRSDILRRSL 1428 (2724)
T ss_pred ccchhhhhhhhcccee---cCCcccccccccccccCchHh-------hhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 279999999999994 778899999999983322211 124567889999999999889999999999999
Q ss_pred HHHHHHcCCCCC
Q 011988 201 VLMYFLRGSLPW 212 (473)
Q Consensus 201 iL~elltG~~Pf 212 (473)
-+|+...|..+|
T Consensus 1429 ~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1429 SLYLRSDGNAYF 1440 (2724)
T ss_pred HHHHHhcccHHH
Confidence 999999998887
No 485
>PLN02236 choline kinase
Probab=97.04 E-value=0.016 Score=58.83 Aligned_cols=137 Identities=12% Similarity=0.147 Sum_probs=78.7
Q ss_pred EEeeEeecCceEEEEEEEcC----CCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 11 LGRKIGSGSFGEIYLGTNIQ----TNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~----~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
-+..|-.|-...+|++.... .++.|++|+..... .-.-..|..+++.+.....-+.+.++...+ .+++|+
T Consensus 40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi 115 (344)
T PLN02236 40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFI 115 (344)
T ss_pred EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEee
Confidence 34455558888999987432 24689999854332 122467999999998777776766554332 456666
Q ss_pred -CCCHHH-----------H---HHH-cCCC------CC-HHHHHHHHHHH-----------------HHHHHHH----H-
Q 011988 85 -GPSLED-----------L---FNF-CSRK------LS-LKTVLMLADQM-----------------INRVEFV----H- 119 (473)
Q Consensus 85 -g~sL~~-----------~---l~~-~~~~------ls-~~~~~~i~~qi-----------------~~aL~yL----H- 119 (473)
+.+|.. + +.. +... +. ...+..++.++ ...+..| .
T Consensus 116 ~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~ 195 (344)
T PLN02236 116 HARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSG 195 (344)
T ss_pred CCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcc
Confidence 333321 1 110 0101 11 22222332111 1112222 1
Q ss_pred ---hCCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 120 ---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 120 ---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
...++|+|+++.|||++ +..+.++|+||..|.
T Consensus 196 ~~~~~~~cH~Dl~~~Nil~~--~~~~~~~lID~Eya~ 230 (344)
T PLN02236 196 DDQEIGFCHNDLQYGNIMID--EETRAITIIDYEYAS 230 (344)
T ss_pred cCCCceEEeCCCCcCcEEEe--CCCCcEEEEeehhcc
Confidence 23589999999999996 334689999998874
No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.77 E-value=0.018 Score=58.07 Aligned_cols=69 Identities=13% Similarity=0.040 Sum_probs=43.1
Q ss_pred EeeEeecCceEEEEEEEcCC---CcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 12 GRKIGSGSFGEIYLGTNIQT---NEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 12 ~~~LG~G~fG~Vy~a~~~~~---~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
++.|..|=...+|++..... +..|++|+..... .-.-..|..+++.+.....-+.+.++...+ ++.+|+
T Consensus 19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~fi 92 (330)
T PLN02421 19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSFI 92 (330)
T ss_pred EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeCCc----Eeehhh
Confidence 34454477778998874332 3479999843322 123468999999998776666665554322 466665
No 487
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.48 E-value=0.057 Score=55.67 Aligned_cols=72 Identities=15% Similarity=0.299 Sum_probs=47.4
Q ss_pred EEeeEeecCceEEEEEEEcCCCcEEEEEEcc------cC----CchhHHHHHHHHHHhcC--CCCCCeeEEeeEeCCeEE
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLNV------KT----KHPQLQYEAKLYKILQG--GTGIPNLRWFGVEGDYNV 78 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~------~~----~~~~l~~E~~il~~L~~--~~~i~~~~~~~~~~~~~~ 78 (473)
..+.||.|....||+..+ .+..|+||... .. .......|...|+.+.. +..++.++.++. +..+
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 467889999999999986 34569999732 11 22334556777766653 235666655554 5568
Q ss_pred EEEecCCC
Q 011988 79 LVIDLLGP 86 (473)
Q Consensus 79 lv~e~~g~ 86 (473)
++||++.+
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 88998844
No 488
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.42 E-value=0.054 Score=53.45 Aligned_cols=73 Identities=19% Similarity=0.253 Sum_probs=52.8
Q ss_pred EEEeeEeecCceEEEEEEEcCCCcEEEEEEcccCCchhHHHHHHHHHHhc--CCCCCCeeEEeeEeCCeEEEEEecC
Q 011988 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLNVKTKHPQLQYEAKLYKILQ--GGTGIPNLRWFGVEGDYNVLVIDLL 84 (473)
Q Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~~~~~l~~E~~il~~L~--~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (473)
+-.+.|+.|....+|... .+++.+.||+........+..|..-|+.|. ..-.++.+..++...+..+|+|||+
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 345678889999999987 678899999977666678999999999994 4556777888887777789999998
No 489
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.16 E-value=0.02 Score=57.51 Aligned_cols=74 Identities=23% Similarity=0.263 Sum_probs=59.8
Q ss_pred EeCCeEEEEEecCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCcEEEeeCCCCCcEEEEecC
Q 011988 72 VEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFG 150 (473)
Q Consensus 72 ~~~~~~~lv~e~~g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~DFG 150 (473)
.++.|.|++|++-|++|.-+- .-..++++.|+.+.+.-|.-+.. -.+-|||+.-.|||| +.|+|.|+||-
T Consensus 296 de~~y~yl~~kdhgt~is~ik-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI----d~GnvtLIDfk 366 (488)
T COG5072 296 DETLYLYLHFKDHGTPISIIK-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI----DEGNVTLIDFK 366 (488)
T ss_pred CCceEEEEEEecCCceeeeee-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee----ecCceEEEEee
Confidence 567788999999998876332 24578889999988877766664 368899999999999 38999999999
Q ss_pred Cccc
Q 011988 151 LAKR 154 (473)
Q Consensus 151 la~~ 154 (473)
+++.
T Consensus 367 lsRl 370 (488)
T COG5072 367 LSRL 370 (488)
T ss_pred eeec
Confidence 9984
No 490
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.97 E-value=0.19 Score=50.48 Aligned_cols=67 Identities=12% Similarity=0.093 Sum_probs=40.2
Q ss_pred cCceEEEEEEEcCCCcEEEEEEcccC--CchhHHHHHHHHHHhcCC--CCCCee----EEeeEeCCeEEEEEecCC
Q 011988 18 GSFGEIYLGTNIQTNEEVAIKLNVKT--KHPQLQYEAKLYKILQGG--TGIPNL----RWFGVEGDYNVLVIDLLG 85 (473)
Q Consensus 18 G~fG~Vy~a~~~~~~~~vAiK~~~~~--~~~~l~~E~~il~~L~~~--~~i~~~----~~~~~~~~~~~lv~e~~g 85 (473)
+.-..||+... .++..+++|+.... ...++..|..++..|... +.+..+ ..+...+.+.+.++++.+
T Consensus 36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~ 110 (325)
T PRK11768 36 SYENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRG 110 (325)
T ss_pred cccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeC
Confidence 34457898873 45678999986433 345678899999888642 211111 011223456677887773
No 491
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.95 E-value=0.017 Score=58.67 Aligned_cols=59 Identities=24% Similarity=0.307 Sum_probs=43.9
Q ss_pred EEEEEecC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccCCCCCcEEEee
Q 011988 77 NVLVIDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH-SKSFLHRDIKPDNFLMGL 137 (473)
Q Consensus 77 ~~lv~e~~-g~sL~~~l~~~~~~ls~~~~~~i~~qi~~aL~yLH-~~gIvHrDIKP~NILl~~ 137 (473)
.+++.+|. |-++..+++. ...+++.+..++.-.+.||--|- -.+++|.|+.|.||++..
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~--~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKW--KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF 380 (565)
T ss_pred ceeeeeccccccHHhhhhc--ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence 46777777 7788888873 33556667777777777765554 468999999999999964
No 492
>PTZ00384 choline kinase; Provisional
Probab=95.67 E-value=0.25 Score=50.79 Aligned_cols=70 Identities=14% Similarity=0.116 Sum_probs=44.0
Q ss_pred EEeeEeecCceEEEEEEEcCCC-c-----EEEEEEcccC--CchhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEEEe
Q 011988 11 LGRKIGSGSFGEIYLGTNIQTN-E-----EVAIKLNVKT--KHPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLVID 82 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~-~-----~vAiK~~~~~--~~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv~e 82 (473)
.++.|..|-...+|++...... . .|++.+.... ..-.-.+|..+++.|.....-+.+...+. .+++.|
T Consensus 54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l~e 129 (383)
T PTZ00384 54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTIQE 129 (383)
T ss_pred EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEEEEE
Confidence 4456656888899999753321 2 2555542111 11223679999999998888888766553 257778
Q ss_pred cC
Q 011988 83 LL 84 (473)
Q Consensus 83 ~~ 84 (473)
|+
T Consensus 130 fI 131 (383)
T PTZ00384 130 WV 131 (383)
T ss_pred Ee
Confidence 77
No 493
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.46 E-value=0.031 Score=52.30 Aligned_cols=30 Identities=37% Similarity=0.707 Sum_probs=20.4
Q ss_pred CCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 122 gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
.++|.||.|.|||+. ...+.++|+||..|.
T Consensus 144 v~cHnDl~~~Nil~~--~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILIN--NKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEET--SSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEec--cCCCeEEEecHHHHh
Confidence 489999999999993 467899999999885
No 494
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=95.13 E-value=0.34 Score=48.41 Aligned_cols=31 Identities=23% Similarity=0.461 Sum_probs=25.5
Q ss_pred CCcccCCCCCcEEEeeCCCCCcEEEEecCCcccc
Q 011988 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKRY 155 (473)
Q Consensus 122 gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 155 (473)
.++|+|+.+.||+|. ..+-+=|+||+++..-
T Consensus 199 ~lvHGD~~~gNlii~---~~~~~gVlDwe~~~lG 229 (321)
T COG3173 199 VLVHGDYRPGNLIID---PGRPTGVLDWELATLG 229 (321)
T ss_pred eeeeCCcccCCEEEe---CCCeeEEEeccccccC
Confidence 489999999999996 4444889999998643
No 495
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.02 E-value=0.24 Score=49.88 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=75.5
Q ss_pred eEeecCceEEEEEEEcCCCcEEEEEEcccC-CchhHHHHHHHHHHhcCCCCCCee-----E--EeeEeCC--eEEEEEec
Q 011988 14 KIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-KHPQLQYEAKLYKILQGGTGIPNL-----R--WFGVEGD--YNVLVIDL 83 (473)
Q Consensus 14 ~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-~~~~l~~E~~il~~L~~~~~i~~~-----~--~~~~~~~--~~~lv~e~ 83 (473)
.|.+ .-..||+... .+|+ +++|+.... ...++..|..+++.|....+.+.. . ....-.. +.+-+++|
T Consensus 33 ~l~s-~eN~~f~~~~-~~g~-~iLki~~~~~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~ 109 (331)
T COG2334 33 GLNS-EENSNFRVQT-EDGR-YILKIYRPGWTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEY 109 (331)
T ss_pred cccc-ccCceEEEEe-cCCC-eEEEEecCCCCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEe
Confidence 3444 4557888874 3444 499996654 667788999999988644332211 1 1112223 66777777
Q ss_pred C-CCCHHH------------HH---HHcCCC-----------CCHH----H---------HHHHHHHHHHHHHHHHh---
Q 011988 84 L-GPSLED------------LF---NFCSRK-----------LSLK----T---------VLMLADQMINRVEFVHS--- 120 (473)
Q Consensus 84 ~-g~sL~~------------~l---~~~~~~-----------ls~~----~---------~~~i~~qi~~aL~yLH~--- 120 (473)
+ |..+.. ++ ....+. ..+. . -.....++...+..+.+
T Consensus 110 l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~ 189 (331)
T COG2334 110 LPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLP 189 (331)
T ss_pred cCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhch
Confidence 7 434431 11 000111 1111 0 01123344444555553
Q ss_pred -----CC--CcccCCCCCcEEEeeCCCCC-cEEEEecCCcc
Q 011988 121 -----KS--FLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAK 153 (473)
Q Consensus 121 -----~g--IvHrDIKP~NILl~~~~~~~-~vkL~DFGla~ 153 (473)
.+ +||+|+.|.|||++ ... .+.++||+-|.
T Consensus 190 ~~lp~~~~~iIH~D~~~~NVl~d---~~~~~~g~iDFdDa~ 227 (331)
T COG2334 190 AHLPALGDQIIHGDLHPDNVLFD---DDTDVSGFIDFDDAG 227 (331)
T ss_pred hhCCcccceeeecCCCccceeEc---CCCCeeeEEEccccc
Confidence 23 99999999999995 333 47899999875
No 496
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.00 E-value=0.32 Score=48.38 Aligned_cols=29 Identities=24% Similarity=0.462 Sum_probs=25.5
Q ss_pred CCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 122 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 122 gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
+++|+|+.+.|||++ .++.+.|+||..+.
T Consensus 197 ~lcHgD~~~~Nvl~~---~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLYD---ETRGGYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEEc---CCCCEEEEEhhhcc
Confidence 799999999999994 56679999999875
No 497
>PTZ00296 choline kinase; Provisional
Probab=94.57 E-value=0.49 Score=49.65 Aligned_cols=70 Identities=16% Similarity=0.024 Sum_probs=44.7
Q ss_pred EEeeEeecCceEEEEEEEcC--------CCcEEEEEEcccCC--chhHHHHHHHHHHhcCCCCCCeeEEeeEeCCeEEEE
Q 011988 11 LGRKIGSGSFGEIYLGTNIQ--------TNEEVAIKLNVKTK--HPQLQYEAKLYKILQGGTGIPNLRWFGVEGDYNVLV 80 (473)
Q Consensus 11 i~~~LG~G~fG~Vy~a~~~~--------~~~~vAiK~~~~~~--~~~l~~E~~il~~L~~~~~i~~~~~~~~~~~~~~lv 80 (473)
-++.|..|=.-.+|++.... .++.|++++..... .-.-..|..+++.+....+-+.+..... .+.+
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~l~~~f~----gg~I 184 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQLLNTFS----GGRI 184 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCceEEEeC----CCEE
Confidence 45667667777899987542 15689999843322 2234679999999987666666654332 2456
Q ss_pred EecC
Q 011988 81 IDLL 84 (473)
Q Consensus 81 ~e~~ 84 (473)
.+|+
T Consensus 185 ~efi 188 (442)
T PTZ00296 185 EEWL 188 (442)
T ss_pred EEee
Confidence 6776
No 498
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=94.40 E-value=0.42 Score=46.67 Aligned_cols=44 Identities=23% Similarity=0.396 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHhC--CCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 107 LADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 107 i~~qi~~aL~yLH~~--gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
.+..+-.++.-+|.. -++|.|+.|+|+|++ +.+.++|+||-.|.
T Consensus 137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t---~~~~l~LIDWEyAg 182 (269)
T COG0510 137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLT---DKGGLFLIDWEYAG 182 (269)
T ss_pred HHHHHHHHhhhcCCCceeeecCCCCccceEEc---CCCcEEEEecccCC
Confidence 333444444444433 489999999999994 55899999998875
No 499
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=93.89 E-value=0.11 Score=51.41 Aligned_cols=29 Identities=38% Similarity=0.729 Sum_probs=24.7
Q ss_pred CCCcccCCCCCcEEEeeCCCCCcEEEEecCCcc
Q 011988 121 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 153 (473)
Q Consensus 121 ~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 153 (473)
.+++|+|+.+.|||++ . +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~---~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLK---D-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEe---C-CcEEEEECcccc
Confidence 5789999999999995 3 568999999764
No 500
>PRK06148 hypothetical protein; Provisional
Probab=93.57 E-value=1.4 Score=51.16 Aligned_cols=46 Identities=9% Similarity=0.120 Sum_probs=30.7
Q ss_pred eeEeecCceEEEEEEEcCCCcEEEEEEcccC-CchhHHHHHHHHHHhcC
Q 011988 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLNVKT-KHPQLQYEAKLYKILQG 60 (473)
Q Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAiK~~~~~-~~~~l~~E~~il~~L~~ 60 (473)
+.|+ |..-.+|+... .+|..+++|+.... ....+..|..++..|..
T Consensus 31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~ 77 (1013)
T PRK06148 31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSEPRVESDFQTAALDHLAA 77 (1013)
T ss_pred eecC-CcCCceEEEEe-CCCCeEEEEEcCCccchhHHHHHHHHHHHHHh
Confidence 4564 45577888873 56778999996543 33456667778877753
Done!