Query 011989
Match_columns 473
No_of_seqs 293 out of 2300
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 19:24:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011989.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011989hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o04_A LMO2201 protein, beta-k 100.0 3.1E-77 1E-81 607.8 43.1 412 36-473 1-412 (413)
2 1e5m_A KAS II, beta ketoacyl a 100.0 4.5E-77 1.5E-81 606.8 42.1 412 37-473 5-416 (416)
3 3ho9_A 3-oxoacyl-[acyl-carrier 100.0 2.5E-77 8.4E-82 610.4 39.7 415 33-472 12-427 (427)
4 4ewg_A Beta-ketoacyl synthase; 100.0 3E-77 1E-81 607.4 40.1 406 38-473 5-412 (412)
5 2gqd_A 3-oxoacyl-[acyl-carrier 100.0 1.1E-76 3.8E-81 606.6 43.2 413 35-473 24-436 (437)
6 3kzu_A 3-oxoacyl-(acyl-carrier 100.0 7E-77 2.4E-81 606.5 41.0 418 37-473 8-427 (428)
7 2ix4_A 3-oxoacyl-[acyl-carrier 100.0 5.2E-77 1.8E-81 608.3 36.3 429 39-472 1-431 (431)
8 2iwz_A 3-oxoacyl-[acyl-carrier 100.0 2.4E-76 8.2E-81 604.3 38.7 415 38-472 20-438 (438)
9 1ox0_A Beta ketoacyl-acyl carr 100.0 7.2E-76 2.5E-80 600.1 41.3 410 35-473 19-428 (430)
10 4ddo_A 3-oxoacyl-[acyl-carrier 100.0 2.6E-76 8.8E-81 606.2 36.8 420 36-473 21-443 (451)
11 3mqd_A Beta-ketoacyl synthase; 100.0 2.7E-76 9.2E-81 602.6 35.7 408 35-473 19-427 (428)
12 1j3n_A 3-oxoacyl-(acyl-carrier 100.0 8.7E-76 3E-80 596.5 37.4 407 39-472 2-408 (408)
13 1tqy_B Actinorhodin polyketide 100.0 4.5E-75 1.6E-79 592.2 38.0 404 38-473 8-412 (415)
14 2vba_A 3-oxoacyl-[acyl-carrier 100.0 1.7E-75 6E-80 593.0 34.3 401 39-473 2-405 (406)
15 1tqy_A Beta-ketoacyl synthase/ 100.0 3.4E-75 1.2E-79 594.8 35.6 409 38-472 2-417 (424)
16 2wge_A 3-oxoacyl-[acyl-carrier 100.0 2.6E-74 9E-79 585.4 39.8 406 38-472 11-416 (416)
17 2gp6_A 3-oxoacyl-[acyl-carrier 100.0 1.6E-73 5.3E-78 582.0 42.5 408 37-472 26-434 (434)
18 3hhd_A Fatty acid synthase; tr 100.0 3.2E-70 1.1E-74 603.0 37.5 400 38-472 3-409 (965)
19 2qo3_A Eryaii erythromycin pol 100.0 5.4E-70 1.8E-74 599.0 36.8 415 38-472 5-431 (915)
20 2hg4_A DEBS, 6-deoxyerythronol 100.0 7E-70 2.4E-74 598.2 35.9 404 39-472 39-453 (917)
21 2vz8_A Fatty acid synthase; tr 100.0 4.9E-68 1.7E-72 632.1 38.5 400 38-472 1-407 (2512)
22 2uv9_A Fatty acid synthase alp 100.0 4.4E-60 1.5E-64 534.7 24.2 394 53-472 1132-1639(1878)
23 2uv8_A Fatty acid synthase sub 100.0 1.1E-59 3.6E-64 532.8 25.9 400 39-472 1150-1658(1887)
24 2pff_A Fatty acid synthase sub 100.0 7.4E-62 2.5E-66 532.3 3.3 393 54-472 959-1459(1688)
25 3zen_D Fatty acid synthase; tr 100.0 5.3E-56 1.8E-60 525.4 34.2 413 51-472 2569-3011(3089)
26 1ulq_A Putative acetyl-COA ace 100.0 3E-35 1E-39 297.4 18.1 274 129-472 26-400 (401)
27 1wl4_A Acetyl-coenzyme A acety 100.0 8E-35 2.7E-39 293.8 20.6 270 129-471 30-396 (397)
28 1wdk_C 3-ketoacyl-COA thiolase 100.0 4E-35 1.4E-39 295.4 16.8 276 129-472 30-390 (390)
29 2wu9_A 3-ketoacyl-COA thiolase 100.0 1.1E-33 3.9E-38 287.6 23.2 274 129-473 55-420 (442)
30 2vu1_A Acetyl-COA acetyltransf 100.0 2.8E-34 9.7E-39 289.5 16.0 270 129-471 27-391 (392)
31 2iik_A 3-ketoacyl-COA thiolase 100.0 7.5E-33 2.6E-37 280.6 23.0 272 129-473 55-417 (418)
32 1afw_A 3-ketoacetyl-COA thiola 100.0 1.1E-32 3.6E-37 277.5 19.1 270 129-472 35-393 (393)
33 2ib8_A Acetyl-COA acetyltransf 100.0 2.1E-32 7.1E-37 276.3 20.6 268 129-471 32-394 (395)
34 4dd5_A Acetyl-COA acetyltransf 100.0 6.4E-32 2.2E-36 272.4 23.1 272 129-471 31-396 (396)
35 3ss6_A Acetyl-COA acetyltransf 100.0 9.5E-32 3.3E-36 271.1 19.9 273 129-472 29-394 (394)
36 3goa_A 3-ketoacyl-COA thiolase 100.0 1.5E-31 5.1E-36 268.7 19.8 277 128-472 26-387 (387)
37 4e1l_A Acetoacetyl-COA thiolas 100.0 6.2E-31 2.1E-35 265.4 22.9 272 129-471 29-395 (395)
38 1ub7_A 3-oxoacyl-[acyl-carrier 100.0 6.1E-32 2.1E-36 265.8 12.4 249 127-471 48-319 (322)
39 3svk_A Acetyl-COA acetyltransf 100.0 2.7E-30 9.2E-35 260.8 17.2 274 129-472 32-407 (407)
40 2ebd_A 3-oxoacyl-[acyl-carrier 100.0 2.4E-30 8.3E-35 252.9 12.2 244 127-470 48-308 (309)
41 1hnj_A Beta-ketoacyl-acyl carr 100.0 4.5E-30 1.6E-34 251.9 10.3 248 126-470 48-316 (317)
42 1mzj_A Beta-ketoacylsynthase I 100.0 1.6E-29 5.4E-34 250.3 9.4 248 127-471 58-331 (339)
43 1zow_A 3-oxoacyl-[acyl-carrier 100.0 3.7E-29 1.3E-33 245.0 8.6 244 127-470 49-310 (313)
44 2x3e_A 3-oxoacyl-[acyl-carrier 99.9 1.6E-27 5.5E-32 235.1 13.0 245 127-471 51-323 (331)
45 1u6e_A 3-oxoacyl-[acyl-carrier 99.9 1.2E-27 4E-32 236.5 8.5 248 127-471 59-332 (335)
46 1u0m_A Putative polyketide syn 99.9 2.7E-27 9.2E-32 237.8 6.3 318 41-471 10-354 (382)
47 4egv_A Acetyl-COA acetyltransf 99.9 6E-28 2.1E-32 250.1 1.6 283 130-438 43-414 (520)
48 2h84_A Steely1; thiolase-fold, 99.9 1.3E-25 4.3E-30 225.2 15.3 325 39-472 12-373 (374)
49 3tsy_A Fusion protein 4-coumar 99.9 6.7E-26 2.3E-30 254.3 12.6 271 123-471 683-973 (979)
50 1ted_A PKS18; thiolase fold, s 99.9 3.5E-24 1.2E-28 215.9 13.6 255 127-472 111-391 (393)
51 3s21_A 3-oxoacyl-[ACP] synthas 99.9 7.4E-23 2.5E-27 202.6 17.8 261 128-470 67-344 (345)
52 4dfe_A 3-oxoacyl-[acyl-carrier 99.9 9.6E-23 3.3E-27 200.9 16.8 294 40-470 11-332 (333)
53 2d3m_A Pentaketide chromone sy 99.8 4.3E-20 1.5E-24 186.7 20.2 269 118-472 104-403 (406)
54 3led_A 3-oxoacyl-acyl carrier 99.8 1.8E-19 6.2E-24 180.5 23.0 249 127-471 115-391 (392)
55 3gwa_A 3-oxoacyl-(acyl-carrier 99.8 8.1E-20 2.8E-24 181.9 18.0 301 31-470 21-364 (365)
56 3il3_A 3-oxoacyl-[acyl-carrier 99.8 2.9E-18 9.8E-23 167.8 22.3 241 129-470 58-322 (323)
57 3h78_A PQS biosynthetic enzyme 99.8 9.8E-20 3.3E-24 180.7 10.6 243 129-471 74-351 (359)
58 3s3l_A CERJ; acyltransferase, 99.8 1.5E-18 5.2E-23 172.1 17.9 246 128-471 53-338 (357)
59 1xes_A Dihydropinosylvin synth 99.8 1E-18 3.6E-23 176.6 15.6 266 123-471 119-409 (413)
60 3il6_A 3-oxoacyl-[acyl-carrier 99.8 2.6E-18 8.9E-23 168.1 17.2 242 129-470 52-320 (321)
61 1ee0_A 2-pyrone synthase; poly 99.8 2E-18 6.8E-23 174.1 16.3 265 119-471 97-391 (402)
62 1xpm_A 3-hydroxy-3-methylgluta 99.8 3.5E-19 1.2E-23 179.2 9.9 219 128-415 50-290 (396)
63 2p0u_A Stilbenecarboxylate syn 99.8 1E-17 3.5E-22 169.4 17.5 264 125-471 116-404 (413)
64 3a5r_A Benzalacetone synthase; 99.8 1E-17 3.4E-22 168.3 17.3 267 118-471 87-382 (387)
65 4efi_A 3-oxoacyl-(acyl-carrier 99.8 7.5E-18 2.6E-22 167.0 16.2 242 129-471 66-343 (354)
66 4ewp_A 3-oxoacyl-[acyl-carrier 99.8 6.3E-18 2.1E-22 167.6 14.1 246 129-470 62-348 (350)
67 1i88_A CHS2, chalcone synthase 99.7 2.2E-17 7.6E-22 165.9 16.9 267 119-471 92-386 (389)
68 3ov2_A Curcumin synthase; type 99.7 2E-17 6.7E-22 166.0 15.2 265 125-472 98-387 (393)
69 3awk_A Chalcone synthase-like 99.7 3.6E-17 1.2E-21 164.8 16.7 264 123-472 109-400 (402)
70 2f82_A HMG-COA synthase; HMGS1 99.7 9.4E-17 3.2E-21 163.9 18.1 181 129-374 52-259 (450)
71 3oit_A OS07G0271500 protein; t 99.7 3.2E-16 1.1E-20 156.9 15.6 263 125-472 92-382 (387)
72 3e1h_A PKSIIINC, putative unch 99.7 2.1E-15 7.3E-20 153.4 19.9 263 129-471 110-407 (465)
73 3v4n_A HMG-COA synthase; hydro 99.6 7.2E-16 2.5E-20 154.1 10.5 215 129-414 56-294 (388)
74 3v7i_A Putative polyketide syn 99.6 2.2E-14 7.5E-19 144.0 21.0 242 127-470 135-411 (413)
75 3euo_A Type III pentaketide sy 99.6 4E-15 1.4E-19 148.6 15.6 265 127-471 79-378 (379)
76 3sqz_A Putative hydroxymethylg 99.6 4.6E-16 1.6E-20 156.7 8.7 211 129-414 85-324 (425)
77 3lma_A Stage V sporulation pro 99.6 3.4E-14 1.1E-18 136.8 21.0 188 129-383 55-250 (347)
78 2v4w_A Hydroxymethylglutaryl-C 99.6 4.7E-14 1.6E-18 142.4 17.6 91 129-250 54-150 (460)
79 2p8u_A Hydroxymethylglutaryl-C 99.6 6.9E-15 2.4E-19 150.7 11.6 177 129-371 73-282 (478)
80 2wya_A Hydroxymethylglutaryl-C 99.4 1.2E-12 4E-17 134.0 11.9 115 129-302 54-174 (460)
81 4e1l_A Acetoacetyl-COA thiolas 82.8 6.2 0.00021 38.6 10.2 100 313-421 7-109 (395)
82 4dd5_A Acetyl-COA acetyltransf 81.7 7 0.00024 38.3 10.2 100 313-421 9-111 (396)
83 3s21_A 3-oxoacyl-[ACP] synthas 79.0 5.5 0.00019 38.2 8.2 78 335-421 70-148 (345)
84 3il3_A 3-oxoacyl-[acyl-carrier 78.8 5.2 0.00018 38.0 7.9 77 335-421 60-137 (323)
85 3ss6_A Acetyl-COA acetyltransf 78.2 8.8 0.0003 37.5 9.5 100 313-421 7-109 (394)
86 4ewp_A 3-oxoacyl-[acyl-carrier 77.8 5.1 0.00017 38.4 7.6 76 336-421 65-141 (350)
87 4dfe_A 3-oxoacyl-[acyl-carrier 77.4 5.4 0.00019 37.9 7.6 78 335-421 67-145 (333)
88 3v7i_A Putative polyketide syn 77.4 4.1 0.00014 40.3 6.8 77 337-421 141-217 (413)
89 3h78_A PQS biosynthetic enzyme 76.6 6.1 0.00021 38.1 7.8 78 334-421 75-153 (359)
90 3goa_A 3-ketoacyl-COA thiolase 76.4 16 0.00055 35.5 10.8 100 313-421 4-109 (387)
91 3il6_A 3-oxoacyl-[acyl-carrier 76.2 6.5 0.00022 37.2 7.7 78 334-421 53-131 (321)
92 2h84_A Steely1; thiolase-fold, 74.9 5.1 0.00017 38.8 6.7 77 337-421 99-175 (374)
93 4efi_A 3-oxoacyl-(acyl-carrier 73.2 7.1 0.00024 37.6 7.2 78 335-421 68-146 (354)
94 3led_A 3-oxoacyl-acyl carrier 72.9 7.1 0.00024 38.2 7.2 76 335-421 119-195 (392)
95 1u0m_A Putative polyketide syn 72.5 7.6 0.00026 37.7 7.3 77 337-421 88-164 (382)
96 2ib8_A Acetyl-COA acetyltransf 72.1 18 0.00061 35.2 10.0 101 313-422 10-113 (395)
97 1ted_A PKS18; thiolase fold, s 72.0 5.3 0.00018 39.0 6.1 77 337-421 117-193 (393)
98 3euo_A Type III pentaketide sy 71.9 7.4 0.00025 37.9 7.1 76 336-419 84-159 (379)
99 3awk_A Chalcone synthase-like 71.4 8.1 0.00028 37.9 7.3 76 337-421 119-195 (402)
100 3gwa_A 3-oxoacyl-(acyl-carrier 70.4 7.2 0.00025 37.7 6.6 78 335-421 82-160 (365)
101 1ulq_A Putative acetyl-COA ace 70.3 20 0.00069 34.9 9.9 101 313-422 4-108 (401)
102 2iik_A 3-ketoacyl-COA thiolase 69.5 22 0.00074 35.0 9.9 100 313-421 32-135 (418)
103 1zow_A 3-oxoacyl-[acyl-carrier 69.2 12 0.00041 35.0 7.7 77 335-421 53-130 (313)
104 3ov2_A Curcumin synthase; type 69.2 4.5 0.00015 39.6 4.8 76 337-421 106-182 (393)
105 1i88_A CHS2, chalcone synthase 68.9 8 0.00027 37.7 6.6 77 336-421 105-182 (389)
106 2ebd_A 3-oxoacyl-[acyl-carrier 68.8 13 0.00044 34.6 7.9 78 334-421 51-129 (309)
107 1hnj_A Beta-ketoacyl-acyl carr 68.6 13 0.00044 34.9 7.8 77 335-421 53-130 (317)
108 1u6e_A 3-oxoacyl-[acyl-carrier 68.1 13 0.00045 35.1 7.8 77 335-421 63-140 (335)
109 3oit_A OS07G0271500 protein; t 67.7 5.1 0.00017 39.2 4.9 76 337-421 100-176 (387)
110 2d3m_A Pentaketide chromone sy 66.7 7.8 0.00027 38.0 6.0 76 337-421 119-195 (406)
111 3svk_A Acetyl-COA acetyltransf 66.7 8.4 0.00029 37.9 6.2 100 313-421 9-114 (407)
112 1mzj_A Beta-ketoacylsynthase I 66.6 15 0.0005 34.9 7.8 77 335-421 62-139 (339)
113 1wl4_A Acetyl-coenzyme A acety 66.6 28 0.00094 33.9 10.0 99 313-421 8-110 (397)
114 2vu1_A Acetyl-COA acetyltransf 66.2 24 0.00083 34.2 9.5 100 313-421 5-107 (392)
115 3lma_A Stage V sporulation pro 66.1 32 0.0011 32.8 9.8 106 132-256 208-316 (347)
116 3s3l_A CERJ; acyltransferase, 65.3 18 0.00062 34.7 8.2 79 335-423 56-136 (357)
117 3e1h_A PKSIIINC, putative unch 64.9 13 0.00044 37.3 7.2 75 336-418 113-187 (465)
118 2p0u_A Stilbenecarboxylate syn 64.5 10 0.00034 37.4 6.3 77 336-421 123-200 (413)
119 1xes_A Dihydropinosylvin synth 64.2 7.8 0.00027 38.2 5.4 77 336-421 128-205 (413)
120 3a5r_A Benzalacetone synthase; 64.0 7.3 0.00025 37.9 5.2 77 336-421 101-178 (387)
121 1ee0_A 2-pyrone synthase; poly 63.4 10 0.00036 37.1 6.2 76 337-421 111-187 (402)
122 1ub7_A 3-oxoacyl-[acyl-carrier 58.3 15 0.00053 34.4 6.2 76 335-421 52-128 (322)
123 2f82_A HMG-COA synthase; HMGS1 56.6 24 0.00083 35.0 7.6 81 335-422 54-135 (450)
124 1wdk_C 3-ketoacyl-COA thiolase 56.5 36 0.0012 33.0 8.7 101 313-422 7-113 (390)
125 2wu9_A 3-ketoacyl-COA thiolase 55.0 34 0.0012 33.9 8.3 98 313-421 32-136 (442)
126 2v4w_A Hydroxymethylglutaryl-C 48.2 30 0.001 34.5 6.5 80 335-421 56-136 (460)
127 1afw_A 3-ketoacetyl-COA thiola 46.3 48 0.0017 32.1 7.7 100 313-421 12-119 (393)
128 2wya_A Hydroxymethylglutaryl-C 44.8 25 0.00085 35.1 5.4 45 336-381 57-102 (460)
129 2ivn_A O-sialoglycoprotein end 44.3 21 0.00071 33.8 4.6 29 337-365 51-80 (330)
130 2p8u_A Hydroxymethylglutaryl-C 43.0 46 0.0016 33.3 7.1 80 335-421 75-155 (478)
131 3tsy_A Fusion protein 4-coumar 41.5 34 0.0012 37.6 6.4 77 337-421 693-769 (979)
132 3o04_A LMO2201 protein, beta-k 39.9 65 0.0022 31.3 7.6 22 335-356 76-97 (413)
133 2gel_A Putative GRAM negative 37.3 41 0.0014 30.0 5.1 65 334-402 35-100 (231)
134 2x3e_A 3-oxoacyl-[acyl-carrier 33.3 1.2E+02 0.004 28.3 8.0 22 131-152 224-245 (331)
135 3ho9_A 3-oxoacyl-[acyl-carrier 33.3 87 0.003 30.6 7.3 22 335-356 90-111 (427)
136 3qbx_A Anhydro-N-acetylmuramic 31.6 36 0.0012 32.8 3.9 27 336-362 69-95 (371)
137 3kzu_A 3-oxoacyl-(acyl-carrier 30.1 1.7E+02 0.0059 28.4 8.9 23 400-422 175-197 (428)
138 3r6m_A YEAZ, resuscitation pro 29.5 1.4E+02 0.0048 26.1 7.2 65 131-230 37-102 (213)
139 1ox0_A Beta ketoacyl-acyl carr 28.2 1.6E+02 0.0055 28.6 8.3 23 334-356 94-116 (430)
140 2gqd_A 3-oxoacyl-[acyl-carrier 27.1 2.6E+02 0.0088 27.2 9.6 23 334-356 99-121 (437)
141 1e5m_A KAS II, beta ketoacyl a 26.9 2E+02 0.0069 27.8 8.7 22 335-356 79-100 (416)
142 3cqy_A Anhydro-N-acetylmuramic 26.8 38 0.0013 32.6 3.2 27 336-362 73-99 (370)
143 2a6a_A Hypothetical protein TM 26.7 1.2E+02 0.004 26.7 6.2 65 131-229 47-111 (218)
144 2gel_A Putative GRAM negative 25.8 1.7E+02 0.0059 25.8 7.2 33 131-168 36-68 (231)
145 4ddo_A 3-oxoacyl-[acyl-carrier 25.2 1.6E+02 0.0053 29.0 7.5 23 400-422 190-212 (451)
146 3ven_A O-carbamoyltransferase 25.1 33 0.0011 35.2 2.4 24 338-361 53-76 (576)
147 3mqd_A Beta-ketoacyl synthase; 24.1 1.2E+02 0.0043 29.5 6.5 23 400-422 179-201 (428)
148 1j3n_A 3-oxoacyl-(acyl-carrier 23.5 1.6E+02 0.0054 28.4 7.2 22 335-356 73-94 (408)
149 1tqy_B Actinorhodin polyketide 23.4 1.7E+02 0.006 28.2 7.5 23 334-356 80-102 (415)
150 3eno_A Putative O-sialoglycopr 23.3 63 0.0021 30.6 4.0 30 336-365 55-85 (334)
151 2iwz_A 3-oxoacyl-[acyl-carrier 22.4 1.9E+02 0.0066 28.2 7.6 23 400-422 185-207 (438)
152 1tqy_A Beta-ketoacyl synthase/ 21.8 1.5E+02 0.0051 28.8 6.6 22 335-356 75-96 (424)
153 3r6m_A YEAZ, resuscitation pro 20.8 1.3E+02 0.0043 26.4 5.2 65 334-402 36-101 (213)
No 1
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=100.00 E-value=3.1e-77 Score=607.81 Aligned_cols=412 Identities=45% Similarity=0.785 Sum_probs=385.1
Q ss_pred CCCCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcc
Q 011989 36 SPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNED 115 (473)
Q Consensus 36 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 115 (473)
|++++|+|||||+++|.|.+.++||++|++|++++++++.++ ...++.++++.+++ ||+.
T Consensus 1 M~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~~ 60 (413)
T 3o04_A 1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLN--------------PDDFPVKIAAELKD------FDVE 60 (413)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------GGGSSCCEEECCSS------CCGG
T ss_pred CCCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccc--------------cccCccccccccCC------CChh
Confidence 456899999999999999999999999999999999998655 23345567777776 9999
Q ss_pred cCCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhh
Q 011989 116 SWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 195 (473)
Q Consensus 116 ~~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (473)
+|+++++.+.|+|+++|+++|+++||+|||+++.++ +..+++|++|++.+........+..+...+...++|+.+++..
T Consensus 61 ~~i~~~~~~~~d~~~~l~l~Aa~~AL~dAGl~~~~i-d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 139 (413)
T 3o04_A 61 KYLEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDS-NANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMI 139 (413)
T ss_dssp GTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTT-TGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHS
T ss_pred hccCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHc-CccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhccc
Confidence 999999999999999999999999999999998887 4899999999999999999999999988999999999999999
Q ss_pred hhHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCC
Q 011989 196 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (473)
Q Consensus 196 ~~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (473)
.+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++++.....+...+.++. ...++.
T Consensus 140 ~~~~a~~ia~~lgl~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~--~~~p~~ 217 (413)
T 3o04_A 140 PDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL--NPDPET 217 (413)
T ss_dssp TTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CCCTTT
T ss_pred ccHHHHHHHHHhCCCCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC--CCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999888874 334678
Q ss_pred CCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011989 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 355 (473)
Q Consensus 276 ~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 355 (473)
.++|||.+++|+++||||+++||++++.|+++|.+++++|.|++.++|+.+.+.|.+...++.++++++|+++|++++||
T Consensus 218 ~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 297 (413)
T 3o04_A 218 ACRPFDKDRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKV 297 (413)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGC
T ss_pred CcCCCcCCCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 89999999999999999999999999999999999999999999999999988888888899999999999999999999
Q ss_pred cEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCC
Q 011989 356 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 435 (473)
Q Consensus 356 d~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 435 (473)
|||++|||||+++|.+|..++.++|+... .++++++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+
T Consensus 298 d~ve~HgtgT~~~d~~e~~al~~~~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~ 375 (413)
T 3o04_A 298 DYINAHGTSTPYNDEYETQAIKTVFGEHA--KKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVC 375 (413)
T ss_dssp CEEECCCCCCHHHHHHHHHHHHHHHGGGT--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSC
T ss_pred CEEEEeCCcCcccCHHHHHHHHHHhcccC--CCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC
Confidence 99999999999999999999999998653 4699999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 436 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
++++++ .+.+..+++++++|||||||+|+|+||++|+
T Consensus 376 ~~~~~~-~~~~~~~~~~~~~~sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 376 DLDYVP-NEAREANVNVVISNSFGFGGHNATLVFKRIE 412 (413)
T ss_dssp CSCCCB-SSCEECCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred CcccCC-CcccCCCCCEEEEeCccCCceEEEEEEEeCC
Confidence 999998 6667778999999999999999999999985
No 2
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=4.5e-77 Score=606.84 Aligned_cols=412 Identities=46% Similarity=0.763 Sum_probs=379.9
Q ss_pred CCCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCccc
Q 011989 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (473)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~ 116 (473)
+|++|+|||||+++|.|.+.++||++|++|++++++++.++ ...++.++++.+++ ||+.+
T Consensus 5 ~m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~i~~------fd~~~ 64 (416)
T 1e5m_A 5 EKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFD--------------ASDQACRFGGEVKD------FDATQ 64 (416)
T ss_dssp -CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCCS------CCGGG
T ss_pred CCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccc--------------cccCccceeEEeCC------CCccc
Confidence 45789999999999999999999999999999999997644 23455667787775 99988
Q ss_pred CCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhh
Q 011989 117 WLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (473)
Q Consensus 117 ~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
++++++.+.|||+++|+++++++||+|||++++++ +.++++|++|++.++.....+++..+...+...++|+.+++.+.
T Consensus 65 ~~~~~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i-~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 143 (416)
T 1e5m_A 65 FLDRKEAKRMDRFCHFAVCASQQAINDAKLVINEL-NADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIA 143 (416)
T ss_dssp TSCHHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTT-TGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHST
T ss_pred cCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhc-CccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhh
Confidence 89999999999999999999999999999998877 47899999999999988888888877788888899999999999
Q ss_pred hHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCC
Q 011989 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (473)
Q Consensus 197 ~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
+.++++|++.||++||+++|+++|+|++.||++|+++|++|++|++||+|+|.++++..+..|...+.++.+ +..|+..
T Consensus 144 ~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~-~~~p~~~ 222 (416)
T 1e5m_A 144 NMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHA 222 (416)
T ss_dssp THHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCGGGT
T ss_pred HHHHHHHHHHhCCCCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCC-CCCCccc
Confidence 999999999999999999999999999999999999999999999999999998888888888888888753 3346789
Q ss_pred CcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 011989 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 277 ~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 356 (473)
|+|||.+++|+++|||++++||++++.|+++|+++|++|.|++.++|+.+++.|++.+.++.++++++|+++|++++|||
T Consensus 223 ~rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 302 (416)
T 1e5m_A 223 SRPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVS 302 (416)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cccCccCCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCC
Confidence 99999999999999999999999999999999999999999999999999888888888999999999999999999999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCC
Q 011989 357 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 436 (473)
Q Consensus 357 ~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 436 (473)
||++|+|||+.+|.+|..++.++|+... .+++++++|+++||+++|+|++++++++++|++++|||++|+++|+|.++
T Consensus 303 ~ve~Hgtgt~~~D~~E~~al~~~~g~~~--~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~ 380 (416)
T 1e5m_A 303 YINAHGTSTPANDVTETRAIKQALGNHA--YNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECD 380 (416)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGG--GGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCC
T ss_pred EEEEECCCCcCcCHHHHHHHHHHHcccC--CCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 9999999999999999999999997642 46899999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 437 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 437 ~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
+++++ .+.+..+++++++|||||||+|+|+||++|+
T Consensus 381 ~~~v~-~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~~ 416 (416)
T 1e5m_A 381 LDYVP-GQSRALIVDVALSNSFGFGGHNVTLAFKKYQ 416 (416)
T ss_dssp SCCCB-SSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred ccccC-CccccCCCCEEEEccccCCCeeEEEEEEeCC
Confidence 99988 5667778999999999999999999999985
No 3
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=100.00 E-value=2.5e-77 Score=610.44 Aligned_cols=415 Identities=46% Similarity=0.802 Sum_probs=382.5
Q ss_pred CCCCCCCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCC
Q 011989 33 PPLSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEF 112 (473)
Q Consensus 33 ~~~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 112 (473)
.+....++|+|||||+++|+|.++++||++|++|++++++++.++ ...++.++++.+++ |
T Consensus 12 ~~~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------f 71 (427)
T 3ho9_A 12 SACVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFD--------------TSAYATKFAGLVKD------F 71 (427)
T ss_dssp -----CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTCSCCEEECCSS------C
T ss_pred CCCCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccc--------------cccCccceeeEcCC------C
Confidence 334456799999999999999999999999999999999998655 23456677888876 9
Q ss_pred CcccCCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchh
Q 011989 113 NEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIP 192 (473)
Q Consensus 113 d~~~~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (473)
|+.+|+++++.+.|||+++|+++|+++||+|||+++.++ +..++||++|++.++......++..+...+...++|+.++
T Consensus 72 d~~~~i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i-~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (427)
T 3ho9_A 72 NCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-NATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVP 150 (427)
T ss_dssp CCTTTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTT-TGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHH
T ss_pred ChhhcCCHHHHhhCCHHHHHHHHHHHHHHHHCCCCcccc-cccceEEEEccccccHHHHHHHHHHHHhcCccccCcceec
Confidence 999999999999999999999999999999999998877 4889999999999999998888888888889999999999
Q ss_pred hhhhhHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCC
Q 011989 193 RILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 272 (473)
Q Consensus 193 ~~~~~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~ 272 (473)
+...+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++.+..+..+...+.++.. ...
T Consensus 151 ~~~~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~~ 229 (427)
T 3ho9_A 151 STIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDN 229 (427)
T ss_dssp HHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTC
T ss_pred cccchHHHHHHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888754 333
Q ss_pred CCCCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 011989 273 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 352 (473)
Q Consensus 273 ~~~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~ 352 (473)
++..|+|||.+++|+++|||+++|||++++.|+++|.++|++|.|++.++|+.+.+.|.+...++.++++++|+++|+++
T Consensus 230 ~~~~~~pfd~~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~ 309 (427)
T 3ho9_A 230 PQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEA 309 (427)
T ss_dssp HHHHCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred CCcccCCccCCCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 55689999999999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCC
Q 011989 353 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 432 (473)
Q Consensus 353 ~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~ 432 (473)
+||||||+|||||+.+|.+|..++.++|+... .++++++.|.++||+++|||++++++++++|++++|||++|+++|+
T Consensus 310 ~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~ 387 (427)
T 3ho9_A 310 SQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPD 387 (427)
T ss_dssp GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG--GTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBC
T ss_pred HHccEEEecCCcCCCcCHHHHHHHHHHhcccC--CCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 99999999999999999999999999998643 4689999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCC-CCcEEEEeccccccceeeEEEeec
Q 011989 433 PIFNDNFMPLTASKDM-PISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 433 ~~~~~~~~~~~~~~~~-~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
|.+++++++ .+.+.. +.+++++|||||||+|+|+||++|
T Consensus 388 ~~~~~~~~~-~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 388 EGCDLDFVP-HEARQVSGMEYTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp TTCCCBCCB-SSCEECSSCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCccccc-cccccCCCCCEEEEeCccCCceeEEEEEEeC
Confidence 999999988 555555 789999999999999999999986
No 4
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=100.00 E-value=3e-77 Score=607.36 Aligned_cols=406 Identities=34% Similarity=0.532 Sum_probs=377.0
Q ss_pred CCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC
Q 011989 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (473)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 117 (473)
|++|+|||||+++|.|.+.++||++|++|++++++++.+++. ..++.++++.+++ ||+.+|
T Consensus 5 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~-------------~~~~~~~~~~v~~------fd~~~~ 65 (412)
T 4ewg_A 5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYF-------------ESLHTRLAAPLPG------FAQPAD 65 (412)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGS-------------SSCCCCEEBCCSC------CCCCTT
T ss_pred CCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccc-------------cCCccceeeecCC------CChhhh
Confidence 578999999999999999999999999999999999875521 1355667777776 999999
Q ss_pred CCchhhhccCHHHHHHHHHHHHHHHHcCC-CCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhh
Q 011989 118 LNSKDHRSIARFIAYALCAADEALHDAKW-LPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (473)
Q Consensus 118 ~~~~~~~~~~~~~~la~~aa~~Al~dAgl-~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+++++.+.|+++++|+++|+++||+|||+ ++.++ +..+++|++|++.+++...++++..+...+...++|+.++..+.
T Consensus 66 i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~i-~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (412)
T 4ewg_A 66 WPRKKTRSMGRVSMYAVRASELALADAGFAGDESI-SDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMP 144 (412)
T ss_dssp SCHHHHTTCCHHHHHHHHHHHHHHHHHTCTTCGGG-GTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHST
T ss_pred CCHHHHhhCCHHHHHHHHHHHHHHHhcCCCCcccc-CccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcc
Confidence 99999999999999999999999999999 66666 48899999999999999999999999888999999999999999
Q ss_pred hHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCC
Q 011989 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (473)
Q Consensus 197 ~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|. +++.....|...+.++.. ...|+..
T Consensus 145 ~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~-~~~p~~~ 222 (412)
T 4ewg_A 145 HTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTR-NDEPHLT 222 (412)
T ss_dssp THHHHHHHHHTTCCSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCC-TTCGGGC
T ss_pred cHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccC-CCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999 788888889888888754 4556789
Q ss_pred CcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 011989 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 277 ~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 356 (473)
|+|||.+++|+++|||+++|||+++++|+++|.++|++|.|++.++|+.+++.| ...++.++++++|+++|++++|||
T Consensus 223 ~rpfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p--~~~~~~~ai~~Al~~Agl~~~dId 300 (412)
T 4ewg_A 223 PRPFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIA 300 (412)
T ss_dssp CCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC--CHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCC
Confidence 999999999999999999999999999999999999999999999999998887 477889999999999999999999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCC-
Q 011989 357 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF- 435 (473)
Q Consensus 357 ~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~- 435 (473)
|||+|||||+.+|.+|..++.++|+.. ++|+++|+++||+++|+|++++++++++|++++|||++|+++|+|.+
T Consensus 301 ~ve~Hgtgt~~~D~~E~~al~~~~~~~-----~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~ 375 (412)
T 4ewg_A 301 YVNAHGTSTDRGDVAESQATARTFGER-----MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACA 375 (412)
T ss_dssp EEECCCCCCHHHHHHHHHHHHHHHCTT-----CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSC
T ss_pred EEEccCCCCccccHHHHHHHHHHcCCC-----CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCccc
Confidence 999999999999999999999999753 89999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 436 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
++++++ .+.+..+++++++|||||||+|+|+||++|+
T Consensus 376 ~~~~v~-~~~~~~~~~~~~~~sfgfGG~na~~vl~~~~ 412 (412)
T 4ewg_A 376 PLDYIR-GEARAIDAEYVMSNNFAFGGINTSLIFRRVR 412 (412)
T ss_dssp CCEECC-SSCEECCCSEEEEEEEEGGGEEEEEEEECCC
T ss_pred cccccc-CcccCCCCCEEEEeeecCCcceEEEEEeeCC
Confidence 888887 6667778999999999999999999999985
No 5
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-76 Score=606.59 Aligned_cols=413 Identities=45% Similarity=0.769 Sum_probs=379.4
Q ss_pred CCCCCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCc
Q 011989 35 LSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNE 114 (473)
Q Consensus 35 ~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~ 114 (473)
|.++++|+|||||+++|.|.++++||++|++|++++++++.++ ...++.++++++++ ||+
T Consensus 24 m~~~~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~i~~------fd~ 83 (437)
T 2gqd_A 24 MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRID--------------TEPYSVHLAGELKN------FNI 83 (437)
T ss_dssp ---CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCSS------CCG
T ss_pred ccCCCCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccc--------------cccCccceeEEeCC------CCh
Confidence 4445899999999999999999999999999999999997643 23455667787775 998
Q ss_pred ccCCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhh
Q 011989 115 DSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 194 (473)
Q Consensus 115 ~~~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (473)
.+++++++.+.|||+++|+++|+++||+|||++++++ +.++++|++|++.++.......+..+..++...++|+.+++.
T Consensus 84 ~~~~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 162 (437)
T 2gqd_A 84 EDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINEN-TADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPML 162 (437)
T ss_dssp GGTSCSTTTTTSCHHHHHHHHHHHHHHHHHTCCCCTT-TGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHH
T ss_pred hcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCcccc-CCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhc
Confidence 8889999999999999999999999999999998877 488999999999999888888888787888888999999999
Q ss_pred hhhHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCC
Q 011989 195 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (473)
Q Consensus 195 ~~~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (473)
..+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++++..+..|..++.++. +..|+
T Consensus 163 ~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~--~~~p~ 240 (437)
T 2gqd_A 163 IPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDIE 240 (437)
T ss_dssp STTHHHHHHHHHHTCCSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CCCTT
T ss_pred chhHHHHHHHHHhCCCCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC--CCCCc
Confidence 9999999999999999999999999999999999999999999999999999999889988888988888875 23467
Q ss_pred CCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011989 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 354 (473)
Q Consensus 275 ~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 354 (473)
..|+|||.+++|+++|||++++||++++.|+++|++++++|.|++.++|+.+++.|++.+.++.++++++|+++|++|+|
T Consensus 241 ~~~~pfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~d 320 (437)
T 2gqd_A 241 TACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 320 (437)
T ss_dssp TSSCTTCTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred cccCCCCCCCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhh
Confidence 89999999999999999999999999999999999999999999999999998888888889999999999999999999
Q ss_pred ccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCC
Q 011989 355 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 434 (473)
Q Consensus 355 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 434 (473)
||||++|+|||+.+|.+|.+++.++|+... .+++|+++|+++||+++|+|++++++++++|+++++||++|+++|+|.
T Consensus 321 Id~ve~HgtgT~~~D~~E~~al~~~fg~~~--~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~ 398 (437)
T 2gqd_A 321 VQYLNAHGTSTPVGDLNEVKAIKNTFGEAA--KHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPE 398 (437)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHGGGG--TSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSS
T ss_pred CCEEEEECCCCcCcCHHHHHHHHHHHhccC--CCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Confidence 999999999999999999999999998642 468999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 435 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
+++++++ .+.+..+++++++|||||||+|+|+||++|+
T Consensus 399 ~~~~~v~-~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 436 (437)
T 2gqd_A 399 CDLDIVP-NEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 436 (437)
T ss_dssp CCSBCCB-SSCEECCCSEEEEEEECGGGEEEEEEEECCC
T ss_pred CCcccCC-CccccCCCCEEEEccCcCCCeeEEEEEEecc
Confidence 9999988 5666778999999999999999999999985
No 6
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=100.00 E-value=7e-77 Score=606.50 Aligned_cols=418 Identities=54% Similarity=0.901 Sum_probs=386.2
Q ss_pred CCCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCC-CCCCCCCcc
Q 011989 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCG-ISSGEFNED 115 (473)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fd~~ 115 (473)
.|++|||||||+++|+|.++++||++|++|+++|++++.++ ...++.++++.++.. .....||+.
T Consensus 8 ~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~fd~~ 73 (428)
T 3kzu_A 8 HMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFE--------------VDDLACQIACRIPVGDGTNGTFNPD 73 (428)
T ss_dssp -CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCCBSSSSTTCBCGG
T ss_pred cccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccc--------------cccCcCceeeEecccccccccCChh
Confidence 36899999999999999999999999999999999998765 234456677777621 123459999
Q ss_pred cCCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCC-CCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhh
Q 011989 116 SWLNSKDHRSIARFIAYALCAADEALHDAKWLPSD-QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 194 (473)
Q Consensus 116 ~~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~-~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (473)
+|+++++.+.|||+++|+++|+++||+|||+++.+ + +..+++|++|++.+.......++..+...+...++|+.+++.
T Consensus 74 ~~i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i-d~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (428)
T 3kzu_A 74 LHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDE-DQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGR 152 (428)
T ss_dssp GTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHH-HHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTT
T ss_pred hcCCHHHHHhCCHHHHHHHHHHHHHHHhcCCChhhhc-cccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccc
Confidence 99999999999999999999999999999998876 5 467899999999999999999988888888999999999999
Q ss_pred hhhHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCC
Q 011989 195 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (473)
Q Consensus 195 ~~~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (473)
..+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|+|||+|+|.+.++..+..+...+.++......+.
T Consensus 153 ~~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~ 232 (428)
T 3kzu_A 153 LINLASGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPT 232 (428)
T ss_dssp CTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGG
T ss_pred hhhhHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876566677
Q ss_pred CCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011989 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 354 (473)
Q Consensus 275 ~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 354 (473)
..++|||.+++|+++||||+++||++++.|+++|.+++++|.|++.++|+.+.+.|.+...++.++++++|+++|++++|
T Consensus 233 ~~~~pfd~~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 312 (428)
T 3kzu_A 233 AASRPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDE 312 (428)
T ss_dssp GTCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred cccCCcccCCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 89999999999999999999999999999999999999999999999999999999888889999999999999999999
Q ss_pred ccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCC
Q 011989 355 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 434 (473)
Q Consensus 355 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 434 (473)
|||||+||||| .+|.+|..++.+.|+... .++++++.|.++||+++|+|++++++++++|++++|||++|+++|+|.
T Consensus 313 Id~ve~HgtgT-~~d~~e~~al~~~~g~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~ 389 (428)
T 3kzu_A 313 IDYINAHGTST-MADTIELGAVERVVGEAA--AKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQ 389 (428)
T ss_dssp CCEEECCCCSS-TTHHHHHHHHHHHHGGGG--GGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSC
T ss_pred eeEEEecCCcc-hhhHHHHHHHHHHhccCC--CceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCC
Confidence 99999999999 999999999999998653 468999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 435 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
+++++++ ...+..+++++++|||||||+|+|+||++|+
T Consensus 390 ~~~~~~~-~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 390 TRIDLVP-HKPRERKIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp CSSBCCB-SSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCcccCC-CCCcCCCCCEEEEeCcccChhhEEEEEeecC
Confidence 9999998 6667778999999999999999999999985
No 7
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=100.00 E-value=5.2e-77 Score=608.34 Aligned_cols=429 Identities=78% Similarity=1.220 Sum_probs=386.0
Q ss_pred CceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccCC
Q 011989 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (473)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~ 118 (473)
++|+|||||+++|+|.++++||++|++|++++++++.+++....|+++........++.++++++++..+...||+.+|+
T Consensus 1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~ 80 (431)
T 2ix4_A 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (431)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcC
Confidence 37999999999999999999999999999999999876654445554433222345677888988732224459988888
Q ss_pred CchhhhccCHHHHHHHHHHHHHHHHcCC-CCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhh
Q 011989 119 NSKDHRSIARFIAYALCAADEALHDAKW-LPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (473)
Q Consensus 119 ~~~~~~~~~~~~~la~~aa~~Al~dAgl-~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (473)
+++ .|||+++|+++|+++||+|||+ ++.++ +.++++|++|++.++......++..+...+.+.++|+.+++.+.+
T Consensus 81 ~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~i-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (431)
T 2ix4_A 81 NSK---AVANFIGYAVCAADEALRDAEWLPTEEE-EKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVN 156 (431)
T ss_dssp CST---TCCHHHHHHHHHHHHHHHHTTCCCCSHH-HHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTT
T ss_pred Chh---hCCHHHHHHHHHHHHHHHHcCCCCcccc-CCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhH
Confidence 776 8999999999999999999999 77665 367899999999999888888888777778888999999999999
Q ss_pred HHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCC
Q 011989 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (473)
Q Consensus 198 ~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (473)
.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|.++++..+..+...+.++.+++..++..|
T Consensus 157 ~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 236 (431)
T 2ix4_A 157 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEAS 236 (431)
T ss_dssp HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSC
T ss_pred HHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999888889888988877777788899
Q ss_pred cCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 011989 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 357 (473)
Q Consensus 278 ~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 357 (473)
+|||.+++|+++|||++++||++++.|+++|.+++++|.|++.++|+.+++.|++...++.++++++|+++|++++||||
T Consensus 237 ~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 316 (431)
T 2ix4_A 237 RPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDY 316 (431)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred ccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999998888878888999999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCC
Q 011989 358 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 437 (473)
Q Consensus 358 v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~ 437 (473)
|++|||||+.+|.+|.+++..+|+......++++++.|+++||+++|+|++++++++++|++++|||++|+++|+|.+++
T Consensus 317 ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~ 396 (431)
T 2ix4_A 317 VNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDK 396 (431)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCS
T ss_pred EEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 99999999999999999999999864333578999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCC-CCcEEEEeccccccceeeEEEeec
Q 011989 438 NFMPLTASKDM-PISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 438 ~~~~~~~~~~~-~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
++++ .+.+.. +++++++|||||||+|+|+||++|
T Consensus 397 ~~v~-~~~~~~~~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 397 RFMP-LTTSKKMLVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp SSCC-CSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred ccCC-ccccccCCCCEEEEecccCCCeeEEEEEeeC
Confidence 9988 555555 789999999999999999999986
No 8
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=100.00 E-value=2.4e-76 Score=604.29 Aligned_cols=415 Identities=52% Similarity=0.840 Sum_probs=378.2
Q ss_pred CCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC
Q 011989 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (473)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 117 (473)
.++|+|||||+++|+|.++++||++|++|++++++++.++ ...++.++++++++..+...||+.+|
T Consensus 20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~fd~~~~ 85 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEE--------------YKSIPCSVAAYVPRGSDEGQFNEQNF 85 (438)
T ss_dssp ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGG--------------GTTSSCCEEECCCBSSSTTSBCGGGT
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchh--------------cccCccceeeeeccccccccCChhhc
Confidence 3689999999999999999999999999999999998654 23455677888864222456999989
Q ss_pred CCchhhhccCHHHHHHHHHHHHHHHHcCCCC-CCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhh
Q 011989 118 LNSKDHRSIARFIAYALCAADEALHDAKWLP-SDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (473)
Q Consensus 118 ~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~-~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+++++.+.|+|+++|+++|+++||+|||+++ .++ +..+++|++|++.++.....+++..+..++...++|+.+++.+.
T Consensus 86 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 164 (438)
T 2iwz_A 86 VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEA-DQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILV 164 (438)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHH-HHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCCcccc-cCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhh
Confidence 9999999999999999999999999999987 555 36789999999999988888888888788888899999999999
Q ss_pred hHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCC
Q 011989 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (473)
Q Consensus 197 ~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++++..+..|..++.++.. ..|+..
T Consensus 165 ~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~--~~p~~~ 242 (438)
T 2iwz_A 165 NMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN--SDPKLA 242 (438)
T ss_dssp THHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC--SCTTTS
T ss_pred hHHHHHHHHHhCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC--CCCCcc
Confidence 999999999999999999999999999999999999999999999999999988889888888888888642 235789
Q ss_pred CcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 011989 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 277 ~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 356 (473)
|+|||.+++|+++|||+++|||++++.|+++|.++|++|+|++.++|+.+++.|++...++.++++++|+++|++|+|||
T Consensus 243 ~~pfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId 322 (438)
T 2iwz_A 243 CRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEIS 322 (438)
T ss_dssp CCTTCTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cccCCCCCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999888888888999999999999999999999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCC
Q 011989 357 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 436 (473)
Q Consensus 357 ~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 436 (473)
|||+|+|||+.+|.+|..++.++|+... .+++|+++|+++||+++|+|++++++++++|++++|||++|+++|+|.++
T Consensus 323 ~ve~HgtgT~~gD~~E~~al~~~fg~~~--~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~ 400 (438)
T 2iwz_A 323 YINAHATSTPLGDAAENKAIKHLFKDHA--YALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFD 400 (438)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGG--GTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCC
T ss_pred EEEecCCCCcccCHHHHHHHHHHHhccC--CCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 9999999999999999999999998642 46899999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCC---CcEEEEeccccccceeeEEEeec
Q 011989 437 DNFMPLTASKDMP---ISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 437 ~~~~~~~~~~~~~---~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
+++++ .+.+.++ ++++++|||||||+|+|+||++|
T Consensus 401 ~~~v~-~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 401 LNYVP-LKAQEWKTEKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp SBCCB-SSCEECCCSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred ccccC-CCcccCCCCCccEEEEecCcCCCeeEEEEEeeC
Confidence 99988 5555555 89999999999999999999986
No 9
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=100.00 E-value=7.2e-76 Score=600.13 Aligned_cols=410 Identities=44% Similarity=0.668 Sum_probs=378.3
Q ss_pred CCCCCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCc
Q 011989 35 LSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNE 114 (473)
Q Consensus 35 ~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~ 114 (473)
||+|++|+|||||+++|.|.+.++||++|++|++++++++.++ ...++.++++.+++ ||+
T Consensus 19 ~m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~ 78 (430)
T 1ox0_A 19 HMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFD--------------HSDFDVHNAAEIQD------FPF 78 (430)
T ss_dssp SCCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECCSS------CCH
T ss_pred cccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCccc--------------ccCCccceeeeccC------CCh
Confidence 4556899999999999999999999999999999999998644 23345667777765 998
Q ss_pred ccCCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhh
Q 011989 115 DSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 194 (473)
Q Consensus 115 ~~~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (473)
.+|+++++.+.|||+++|+++|+++||+|||++++++ +..+++|++|++.+++....+++..+..++.+.++|+.+++.
T Consensus 79 ~~~~~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (430)
T 1ox0_A 79 DKYFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEAL-NRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKA 157 (430)
T ss_dssp HHHCCGGGGGTCCHHHHHHHHHHHHHHHHTTCCTTTS-CGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHH
T ss_pred hhcCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhc-CccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhcc
Confidence 8889999999999999999999999999999988877 488999999999999888888888887888889999999999
Q ss_pred hhhHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCC
Q 011989 195 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (473)
Q Consensus 195 ~~~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (473)
+.+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++++..+..|..++.++. ...++
T Consensus 158 ~~~~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~--~~~p~ 235 (430)
T 1ox0_A 158 LPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPT 235 (430)
T ss_dssp STTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CSSTT
T ss_pred chhHHHHHHHHHhcCCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC--CCCCC
Confidence 9999999999999999999999999999999999999999999999999999999889988888888887764 23467
Q ss_pred CCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011989 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 354 (473)
Q Consensus 275 ~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 354 (473)
..|+|||.+++|+++||||+++||++++.|+++|.++|++|.|++.++|+.+.+.|++...++.++++++|+++|++++|
T Consensus 236 ~~~~pFd~~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 315 (430)
T 1ox0_A 236 RASIPFDKDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQ 315 (430)
T ss_dssp SSSCTTBTTCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred CCCCCCCCCCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHH
Confidence 89999999999999999999999999999999999999999999999999998888888889999999999999999999
Q ss_pred ccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCC
Q 011989 355 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 434 (473)
Q Consensus 355 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 434 (473)
||||++|+|||+.+|..|..++.++|+. +++|+++|+++||+++|+|++++++++++|++++|||++|+++|+|.
T Consensus 316 Id~ve~Hgtgt~~~D~~E~~al~~~~g~-----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~ 390 (430)
T 1ox0_A 316 VAYVNAHGTSTPANEKGESGAIVAVLGK-----EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDY 390 (430)
T ss_dssp CCCEECCCCSCHHHHHHHHHHHHHHHCS-----SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTT
T ss_pred cCEEEEeCCcCcccCHHHHHHHHHHhCC-----CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCC
Confidence 9999999999999999999999999975 48999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 435 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
+++++++ .+.+..+++++++|||||||+|+|+||++|+
T Consensus 391 ~~~~~v~-~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 391 IEANVVY-GQGLEKEIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp CCSEECB-SSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCcccCC-CCCcCCCCCEEEEeCccCCCceEEEEEeecC
Confidence 9999887 5556678899999999999999999999984
No 10
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=100.00 E-value=2.6e-76 Score=606.22 Aligned_cols=420 Identities=48% Similarity=0.786 Sum_probs=385.0
Q ss_pred CCCCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCC--CCCCCCC
Q 011989 36 SPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCG--ISSGEFN 113 (473)
Q Consensus 36 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~fd 113 (473)
.|+++|+|||||+++|+|.+.++||++|++|++++++++.++ ...++.+++++++.. .+...||
T Consensus 21 ~m~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~--------------~~~~~~~~~g~v~~~~~~~~~~fd 86 (451)
T 4ddo_A 21 SMTLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDI--------------AGELSAKVGGTVQDVAEDPEGGFD 86 (451)
T ss_dssp ---CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHH--------------HTTSSCCEEECCCCTTTCTTTCCC
T ss_pred cCCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccc--------------cccccCccceEccccccccccccc
Confidence 346899999999999999999999999999999999998654 234556778887631 1123599
Q ss_pred cccCCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhh
Q 011989 114 EDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPR 193 (473)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (473)
+.+|+++++.+.|+++++|+++|+++||+|||+++.++.+..+++|++|++.+.......++..+...+...++|+.+++
T Consensus 87 ~~~~i~~~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (451)
T 4ddo_A 87 PERSVPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPF 166 (451)
T ss_dssp GGGTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHH
T ss_pred hhhhCCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhc
Confidence 99999999999999999999999999999999998876237799999999999999998988888888888999999999
Q ss_pred hhhhHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCC
Q 011989 194 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 273 (473)
Q Consensus 194 ~~~~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (473)
...+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++.+..+..+...+.++..+...+
T Consensus 167 ~~~~~~a~~ia~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~ 246 (451)
T 4ddo_A 167 FLSNLAAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEP 246 (451)
T ss_dssp HCTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSG
T ss_pred cccchHHHHHHHHhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887666667
Q ss_pred CCCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011989 274 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 353 (473)
Q Consensus 274 ~~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 353 (473)
...++|||.+++|+++||||++|||++++.|+++|.+++++|.|++.++|+.+.+.+.+...++.++++++|+++|++++
T Consensus 247 ~~~~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~ 326 (451)
T 4ddo_A 247 VRASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPE 326 (451)
T ss_dssp GGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred cccccccccCCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 78999999999999999999999999999999999999999999999999998888888888999999999999999999
Q ss_pred CccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCC
Q 011989 354 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 433 (473)
Q Consensus 354 dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 433 (473)
|||||++|+|||+++|.+|..++.++|+.. .+++|+++|+++||++||+|++++++++++|++++|||++|+++|+|
T Consensus 327 dId~ve~Hgtgt~~~d~~E~~al~~~~~~~---~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~ 403 (451)
T 4ddo_A 327 QVDYVNAHATSTPVGDAGEIEALKTVFGVG---AGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDP 403 (451)
T ss_dssp GCCEEECCCCSCHHHHHHHHHHHHHHHCSS---SSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCG
T ss_pred HcCEEEecCCcCcccCHHHHHHHHHHhCCC---CCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCc
Confidence 999999999999999999999999999862 47899999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 434 IF-NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 434 ~~-~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
.+ ++++++ .+.+..+.+++++|||||||+|+|+||++|.
T Consensus 404 ~~~~~~~~~-~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 404 AADGLDLIG-PAARHVPVEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp GGTTSEECC-SSCEECCCSEEEEEEEETTTEEEEEEEEESC
T ss_pred ccccccccC-CCCCCCCcCEEEEeeEcCCCceEEEEEeeCC
Confidence 99 788887 5666778999999999999999999999974
No 11
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=100.00 E-value=2.7e-76 Score=602.55 Aligned_cols=408 Identities=38% Similarity=0.578 Sum_probs=368.1
Q ss_pred CCCCCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCc
Q 011989 35 LSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNE 114 (473)
Q Consensus 35 ~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~ 114 (473)
.++|++|+|||||+++|+|.+.++||++|++|++++++++.++ ...++.++++.+ + ||+
T Consensus 19 ~~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~g~~-~------fd~ 77 (428)
T 3mqd_A 19 PGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYA--------------ELGFRCQVHGAP-D------IDI 77 (428)
T ss_dssp ---CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHH--------------HTTCSCCEEECC-C------CCH
T ss_pred CCCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCccc--------------ccCCCccccccc-C------CCh
Confidence 3456899999999999999999999999999999999998644 223455566653 3 999
Q ss_pred ccCCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhh
Q 011989 115 DSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 194 (473)
Q Consensus 115 ~~~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (473)
.+|+++++.+.|+++++|+++|+++||+|||++++++ +..++||++|++.+.......+...+.+.+...++|+.+++.
T Consensus 78 ~~~i~~~~~~~~d~~~~l~~~aa~~Al~dAGl~~~~i-~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (428)
T 3mqd_A 78 ESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEV-SNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKA 156 (428)
T ss_dssp HHHSCTGGGTTCCHHHHHHHHHHHHHHHHHTCCHHHH-SSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHH
T ss_pred hhcCCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHc-cccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccc
Confidence 9899999999999999999999999999999988777 488999999999988887888888888888899999999999
Q ss_pred hhhHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCC
Q 011989 195 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (473)
Q Consensus 195 ~~~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (473)
+.+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|.++ +.....+...+.++......|+
T Consensus 157 ~~~~~a~~ia~~lgl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s-~~~~~~~~~~~~ls~~~~~~p~ 235 (428)
T 3mqd_A 157 MSSTASATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLD-WTLSVLFDAMGAMSSKYNDTPS 235 (428)
T ss_dssp STTHHHHHHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-HHHHHHHHHTTCBCCTTTTSGG
T ss_pred cccHHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccc-hHHHHHHHHhhhhcccccCCcc
Confidence 999999999999999999999999999999999999999999999999999999954 5555568888888866566678
Q ss_pred CCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011989 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 354 (473)
Q Consensus 275 ~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 354 (473)
..|+|||.+++|+++||||++|||+++++|+++|.+||++|.|++.++|+.+++.| ...++.+++++||+ |++ +|
T Consensus 236 ~~~rpfd~~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P--~~~~~~~ai~~Al~--gl~-~d 310 (428)
T 3mqd_A 236 TASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALS--TVT-SK 310 (428)
T ss_dssp GSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC--CSHHHHHHHHHHHT--TCC-SC
T ss_pred cccCcccCCCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHh--CCc-cc
Confidence 89999999999999999999999999999999999999999999999999988877 56788999999999 999 99
Q ss_pred ccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCC
Q 011989 355 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 434 (473)
Q Consensus 355 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 434 (473)
|||||+|||||+.+|.+|..++.++|+... ..++++++|+++||+++|||++++++++++|++++|||++|+++|+|.
T Consensus 311 Id~ve~HgtgT~~~D~~E~~al~~~~~~~~--~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~ 388 (428)
T 3mqd_A 311 IDYINPHATSTPAGDAPEIEAIRQIFGAGD--VCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPA 388 (428)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHCSGG--GSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGG
T ss_pred cCEEEEeCCCCCCcCHHHHHHHHHHhcccC--CCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcc
Confidence 999999999999999999999999998422 247999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 435 FN-DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 435 ~~-~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
++ +++++ ...+..+++++++|||||||+|+|+||++|+
T Consensus 389 ~~~~~~~~-~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 389 FADMPIVR-KRIDNVQLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp GTTSCBCS-SCEESCCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred cccCCccC-CccccCCCCEEEEecCcCCcceEEEEEeecC
Confidence 86 77776 4444467899999999999999999999985
No 12
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=8.7e-76 Score=596.46 Aligned_cols=407 Identities=53% Similarity=0.868 Sum_probs=376.6
Q ss_pred CceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccCC
Q 011989 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (473)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~ 118 (473)
++|+|||||+++|+|.++++||++|++|++++++++.++ ...++.++++++ + ||+.+|+
T Consensus 2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~--------------~~~~~~~~~~~~-~------fd~~~~~ 60 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFD--------------ASALPVRIAAEV-D------VDPGAYL 60 (408)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECC-C------CCGGGTS
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccC--------------cccCccceEEEE-c------cChhhcC
Confidence 689999999999999999999999999999999997644 234556677777 4 9998889
Q ss_pred CchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhH
Q 011989 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (473)
Q Consensus 119 ~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (473)
++++.+.|+++++|+++|+++||+|||++++++ +..++||++|++.++......++..+..++...++|+.+++.+++.
T Consensus 61 ~~~~~~~~d~~~~l~~~aa~~AL~dAGl~~~~i-d~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (408)
T 1j3n_A 61 DRKELRRLDRFVQYALIAAQLALEDAGLKPEDL-DPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANM 139 (408)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHHHHTCCGGGS-CGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTH
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHcCCCcccc-CCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhH
Confidence 999999999999999999999999999988777 4789999999999998888888888888888899999999999999
Q ss_pred HHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCc
Q 011989 199 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278 (473)
Q Consensus 199 ~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (473)
++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|.++++..+..|...+.++.+ +..++..|+
T Consensus 140 ~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~-~~~p~~~~~ 218 (408)
T 1j3n_A 140 ASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKASR 218 (408)
T ss_dssp HHHHHHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHCC
T ss_pred HHHHHHHHhCCCCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCC-CCCCCcCcc
Confidence 9999999999999999999999999999999999999999999999999998999988899888888743 344567899
Q ss_pred CccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 011989 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYV 358 (473)
Q Consensus 279 pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v 358 (473)
|||.+++|+++|||++++||++++.|+++|.+++++|.|++.++|+.+.+.|++...++.++++++|+++|++++|||||
T Consensus 219 pfd~~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~v 298 (408)
T 1j3n_A 219 PFTLSRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYI 298 (408)
T ss_dssp TTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred cCcCCCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999999988888888899999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCCC
Q 011989 359 NAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 438 (473)
Q Consensus 359 ~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~ 438 (473)
++|+|||+.+|.+|..++.++|+... .++++++.|.++||+++|+|++++++++++|++++|||++|+++|+|.++++
T Consensus 299 e~Hgtgt~~gD~~E~~al~~~~g~~~--~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~ 376 (408)
T 1j3n_A 299 NAHGTSTPVGDRAEVLAIKRVFGDHA--KRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLD 376 (408)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHHHHH--TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSB
T ss_pred EEeCCcCcccCHHHHHHHHHHhcCcC--CCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc
Confidence 99999999999999999999998643 3689999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 439 FMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 439 ~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
+++ +++..+++++++|||||||+|+|+||++|
T Consensus 377 ~v~--~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 408 (408)
T 1j3n_A 377 FVP--EPREAKVDYALSNSFAFGGHNAVLAFKRV 408 (408)
T ss_dssp CCS--SCEECCCSEEEEEEECTTSEEEEEEEECC
T ss_pred cCC--CCcCCCCCEEEEecccCCcceEEEEEecC
Confidence 887 45667889999999999999999999986
No 13
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=4.5e-75 Score=592.20 Aligned_cols=404 Identities=25% Similarity=0.375 Sum_probs=372.3
Q ss_pred CCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC
Q 011989 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (473)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 117 (473)
.++|+|||||+++|.|.+.++||++|++|++++++++.++ ...++.++++++++ ||+.+|
T Consensus 8 ~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~~~~ 67 (415)
T 1tqy_B 8 DKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFD--------------VSRYPATLAGQIDD------FHAPDH 67 (415)
T ss_dssp --CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTT--------------GGGSSCCEEECCCS------CCHHHH
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCccc--------------ccCCCcceEEEeCC------CCchhc
Confidence 4689999999999999999999999999999999998543 12345677888876 999888
Q ss_pred CCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhh
Q 011989 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (473)
Q Consensus 118 ~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (473)
+++++.+.|+++++|+++++++||+|||++++++ +..+++|++|++.+++....+++..+..++...++|+.+++...+
T Consensus 68 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i-d~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (415)
T 1tqy_B 68 IPGRLLPQTDPSTRLALTAADWALQDAKADPESL-TDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYA 146 (415)
T ss_dssp SCTTTGGGCCHHHHHHHHHHHHHHHHTTCCGGGS-CGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCcccc-CCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccch
Confidence 9999999999999999999999999999988777 478999999999999998888888888888889999999999999
Q ss_pred HHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCC
Q 011989 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (473)
Q Consensus 198 ~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (473)
.++++|++.||++||+++|+++|+|++.||.+|+++|++| +|+|||+|+|.++++..+..+...+.++. +..++..|
T Consensus 147 ~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~--~~~~~~~~ 223 (415)
T 1tqy_B 147 VNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST--ATDPDRAY 223 (415)
T ss_dssp HHHHHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC--CSCGGGSC
T ss_pred HHHHHHHHHhCCCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC--CCCCCCCc
Confidence 9999999999999999999999999999999999999999 99999999999899999999998888874 23356799
Q ss_pred cCccCCCCceeeccceEEEEEccchHHHhcCC-eEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 011989 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 278 ~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~-~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 356 (473)
+|||.+++|+++|||++++||++++.|+++|. ++|++|.|++.++|+.+++.|+. ++.++++++|+++|++++|||
T Consensus 224 ~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId 300 (415)
T 1tqy_B 224 LPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVD 300 (415)
T ss_dssp CTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCC
T ss_pred CCCCCCCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCC
Confidence 99999999999999999999999999999999 99999999999999999888875 678999999999999999999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCC
Q 011989 357 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 436 (473)
Q Consensus 357 ~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 436 (473)
|||+|||||+.+|.+|..++.++|+.. .++|++.|+++||+++|+|++++++++++|+++++||++|+++|+|.++
T Consensus 301 ~ve~Hgtgt~~~D~~E~~al~~~~g~~----~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~ 376 (415)
T 1tqy_B 301 VVFADGAGVPELDAAEARAIGRVFGRE----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYG 376 (415)
T ss_dssp EEECCCCCSHHHHHHHHHHHHHHHCTT----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGC
T ss_pred EEEEeCCCCcCcCHHHHHHHHHHhCCC----CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 999999999999999999999999754 4899999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 437 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 437 ~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
+++++ .+++.++++++++|||||||+|+|+||+++.
T Consensus 377 ~~~v~-~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 377 IDLVL-GEPRSTAPRTALVLARGRWGFNSAAVLRRFA 412 (415)
T ss_dssp CEECB-SSCBCCCCSEEEEEEEETTTEEEEEEEEEC-
T ss_pred ccccC-CCCccCCCCEEEEecCcCCCeEEEEEEecCC
Confidence 98887 5667778999999999999999999999873
No 14
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=100.00 E-value=1.7e-75 Score=592.96 Aligned_cols=401 Identities=37% Similarity=0.592 Sum_probs=361.9
Q ss_pred CceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccCC
Q 011989 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (473)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~ 118 (473)
++|+|||||+++|+|.+.++||++|++|++++++++.++ ...++.++++.++ ||+.+|+
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~-------fd~~~~~ 60 (406)
T 2vba_A 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELK--------------DSGMRSHVWGNVK-------LDTTGLI 60 (406)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHH--------------HTTCSCCEEECCC-------CCCTTSS
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCccc--------------ccCCccceEEEec-------CChhhcC
Confidence 689999999999999999999999999999999988544 1234455666553 8888889
Q ss_pred CchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCC-CceeEEEecCCCChhhHHHHHHHHH-HhccccCCCcchhhhhh
Q 011989 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQK-ERTGVSIGGGIGSISDTVDAAQMIC-EKRLRRLSPFFIPRILI 196 (473)
Q Consensus 119 ~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~-~~~gvivg~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 196 (473)
++++.+.|||+++|+++++++||+|||+++++++ . ++++|++|++.++.....+++..+. .++...++|+.+++.+.
T Consensus 61 ~~~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (406)
T 2vba_A 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQ-NNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMA 139 (406)
T ss_dssp CHHHHTTCCHHHHHHHHHHHHHHHHHTCCHHHHT-TCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHST
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHCCCChhHcC-CCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhh
Confidence 9999999999999999999999999999876664 5 8999999999999888887777665 55666788999999999
Q ss_pred hHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCC
Q 011989 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (473)
Q Consensus 197 ~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
+.++++|++.||++||+++|+++|+|++.||++|+++|++|++|++||+|+|.++.+..+. |..++.++..++..|+..
T Consensus 140 ~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~ 218 (406)
T 2vba_A 140 SGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKA 218 (406)
T ss_dssp THHHHHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGS
T ss_pred HHHHHHHHHhccCCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999988887777 888888875334446789
Q ss_pred CcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 011989 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 277 ~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 356 (473)
|+|||.+++|+++|||+++|||+++++|+++|++||++|.|++.++|+.+++.|+ ..++.++++++|+++| +|||
T Consensus 219 ~~pfd~~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag---~dId 293 (406)
T 2vba_A 219 SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD---TPID 293 (406)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC---SCCC
T ss_pred cCcCcCCCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC---CCcc
Confidence 9999999999999999999999999999999999999999999999999888776 6788999999999999 8999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCC
Q 011989 357 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 436 (473)
Q Consensus 357 ~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 436 (473)
|||+|||||+.+|.+|..++.++|+.. .++|+++|+++||+++|+|++++++++++|+++++||++|+++|+|.++
T Consensus 294 ~ve~HgtgT~~gD~~E~~al~~~fg~~----~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~ 369 (406)
T 2vba_A 294 YLNSHGTSTPVGDVKELAAIREVFGDK----SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAA 369 (406)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHTTC----CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCT
T ss_pred EEEeeCccCcccCHHHHHHHHHHhCcC----CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCcc
Confidence 999999999999999999999999764 3799999999999999999999999999999999999999999999998
Q ss_pred -CCCCccccCCCCCCcEEEEeccccccceeeEEEeecC
Q 011989 437 -DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 437 -~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
+++++ ...+. +++++++|||||||+|+|+||++|+
T Consensus 370 ~~~~v~-~~~~~-~~~~a~~~sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 370 GLNIVT-ETTDR-ELTTVMSNSFGFGGTNATLVMRKLK 405 (406)
T ss_dssp TSEECC-SCEEC-CCCEEEEEEEETTTEEEEEEEECC-
T ss_pred ccccCC-cccCC-CCCEEEEcCCCCCCeEEEEEEEeCC
Confidence 88887 44444 7899999999999999999999984
No 15
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=3.4e-75 Score=594.75 Aligned_cols=409 Identities=32% Similarity=0.528 Sum_probs=369.1
Q ss_pred CCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC
Q 011989 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (473)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 117 (473)
+++|+|||||+++|+|.+.++||++|++|++++++++.++ ...++.++++.+ + ||+.+|
T Consensus 2 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~~-~------fd~~~~ 60 (424)
T 1tqy_A 2 KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFD--------------PSPYRSQVAAEA-D------FDPVAE 60 (424)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECC-C------CCHHHH
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcc--------------cccCCcceeEEe-c------cCHhhc
Confidence 3689999999999999999999999999999999997644 223445566666 3 999999
Q ss_pred -CCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHH--HhccccCCCcchhhh
Q 011989 118 -LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMIC--EKRLRRLSPFFIPRI 194 (473)
Q Consensus 118 -~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 194 (473)
+++++.+.|||+++|+++++++||+|||++++++ +..+++|++|++.++.....+++..+. .++...++|+.++..
T Consensus 61 ~i~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i-~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (424)
T 1tqy_A 61 GFGPRELDRMDRASQFAVACAREAFAASGLDPDTL-DPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHM 139 (424)
T ss_dssp TCCHHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTC-CGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTT
T ss_pred CCCHHHHHhcCHHHHHHHHHHHHHHHHCCCCchhc-CCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhccc
Confidence 9999999999999999999999999999998877 488999999999998888777777665 455566777776666
Q ss_pred hhhHHHH----HHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccC
Q 011989 195 LINMASG----HVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYN 270 (473)
Q Consensus 195 ~~~~~a~----~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~ 270 (473)
.++..++ +|++.||++||+++|+++|+|++.||++|+++|++|++|++||+|+|.++++..+..|...+.++.+ +
T Consensus 140 ~~~~~a~~~~~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~-~ 218 (424)
T 1tqy_A 140 FDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR-N 218 (424)
T ss_dssp HHHHSTTHHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-C
T ss_pred ccccccchhHhHHHHhcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCC-C
Confidence 6665555 9999999999999999999999999999999999999999999999998889888888888888753 3
Q ss_pred CCCCCCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 011989 271 GTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGL 350 (473)
Q Consensus 271 ~~~~~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl 350 (473)
..|+..|+|||.+++|+++|||+++|||+++++|+++|+++|++|.|++.++|+.+.+.|.+.+.++.++++++|+++|+
T Consensus 219 ~~p~~~~rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl 298 (424)
T 1tqy_A 219 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRT 298 (424)
T ss_dssp SCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCccCCCCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 34678999999999999999999999999999999999999999999999999999888888888899999999999999
Q ss_pred CCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCC
Q 011989 351 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 430 (473)
Q Consensus 351 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~ 430 (473)
+++||||||+|+|||+.+|.+|..++.++|+... .+++|+++|+++||+++|+|++++++++++|+++.+||++|+++
T Consensus 299 ~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~--~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~ 376 (424)
T 1tqy_A 299 DATDIDYINAHGSGTRQNDRHETAAYKRALGEHA--RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRT 376 (424)
T ss_dssp CGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGG--GGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCS
T ss_pred CHHHCCEEEecCccCcCcCHHHHHHHHHHhcccC--CCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCC
Confidence 9999999999999999999999999999998642 46899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 431 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
|+|.+++++++ .+.+..+.+++++|||||||+|+|+||+++
T Consensus 377 ~~p~~~~~~v~-~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~ 417 (424)
T 1tqy_A 377 SDPECDLDYVP-LEARERKLRSVLTVGSGFGGFQSAMVLRDA 417 (424)
T ss_dssp BBTTBCSCCCB-SSCEECCCSEEEEEEEETTTEEEEEEEECH
T ss_pred CCCCCCcccCC-CcccCCCCCEEEEccccCCceEEEEEEccC
Confidence 99999999998 566777899999999999999999999986
No 16
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=100.00 E-value=2.6e-74 Score=585.40 Aligned_cols=406 Identities=36% Similarity=0.575 Sum_probs=369.5
Q ss_pred CCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC
Q 011989 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (473)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 117 (473)
+++|+|||||+++|+|.++++||++|++|++++++++.+++.. ..++.++++++++ |+.+|
T Consensus 11 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~------------~~~~~~~~~~~~~-------d~~~~ 71 (416)
T 2wge_A 11 FPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTK------------WDLAVKIGGHLKD-------PVDSH 71 (416)
T ss_dssp SCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHH------------HTCSCCEEBCCSS-------CGGGG
T ss_pred CCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCcccccc------------ccCCccEEEEeCC-------chhhh
Confidence 4689999999999999999999999999999999998543111 1345567777752 56667
Q ss_pred CCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhh
Q 011989 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (473)
Q Consensus 118 ~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (473)
+++++.+.|||+++|+++++++||+|||+ +++ +.++++|++|++.+++.....++..+..++...++|+.+++.+.+
T Consensus 72 ~~~~~~~~~d~~~~l~l~aa~~AL~dAG~--~~~-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 148 (416)
T 2wge_A 72 MGRLDMRRMSYVQRMGKLLGGQLWESAGS--PEV-DPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPN 148 (416)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHHHTTC--CCC-CGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCC--Ccc-CCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccch
Confidence 99999999999999999999999999999 344 478999999999999888888888888888889999999999999
Q ss_pred HHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCC
Q 011989 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (473)
Q Consensus 198 ~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (473)
..+++|++.||++||+++++++|+|++.||.+|+++|++|++|++||+|+|.++.+.....+...+.++.+ +..++..|
T Consensus 149 ~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~-~~~~~~~~ 227 (416)
T 2wge_A 149 GAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDEPERAS 227 (416)
T ss_dssp HHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCC-TTSGGGSC
T ss_pred hHHHHHHHHhccCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhcc-ccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999988888888888887643 44567899
Q ss_pred cCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 011989 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 357 (473)
Q Consensus 278 ~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 357 (473)
+|||.+++|+++|||++++||++++.|+++|.+++++|.|++.++|+.+++.|++...++.++++++|+++|++++||||
T Consensus 228 ~pfd~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 307 (416)
T 2wge_A 228 RPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDH 307 (416)
T ss_dssp CTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred cccccCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999999998888888889999999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCC
Q 011989 358 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 437 (473)
Q Consensus 358 v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~ 437 (473)
||+|||||+.+|.+|.+++..+ +.. ++++++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++
T Consensus 308 ve~HgtgT~~gD~~E~~al~~~-~~~----~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~ 382 (416)
T 2wge_A 308 VNAHGTATPIGDAAEANAIRVA-GCD----QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDL 382 (416)
T ss_dssp EECCCCCCHHHHHHHHHHHHHT-TCT----TSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCC
T ss_pred EEECCCCCcCCCHHHHHHHHHh-ccC----CCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 9999999999999999999998 432 58999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 438 NFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 438 ~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
++++ .+.+..+++++++|||||||+|+|+||++|
T Consensus 383 ~~v~-~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 383 DVVA-GEPRYGDYRYAVNNSFGFGGHNVALAFGRY 416 (416)
T ss_dssp EECC-SSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred ccCC-CCCccCCCCEEEEeCcccCceeEEEEEEeC
Confidence 9888 555667789999999999999999999986
No 17
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-73 Score=581.99 Aligned_cols=408 Identities=35% Similarity=0.541 Sum_probs=371.2
Q ss_pred CCCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCccc
Q 011989 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (473)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~ 116 (473)
.+++|+|||||+++|+|.++++||++|++|++++++++.+++. ...++.++++++++ |+.+
T Consensus 26 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~------------~~~~~~~~~~~v~~-------d~~~ 86 (434)
T 2gp6_A 26 AFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVE------------EFDLPVRIGGHLLE-------EFDH 86 (434)
T ss_dssp TSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHH------------HHCCSCCEEECCSC-------CSTT
T ss_pred CCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccc------------cccCccceeEEcCC-------chhh
Confidence 3468999999999999999999999999999999999854311 12345567777752 4556
Q ss_pred CCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhh
Q 011989 117 WLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (473)
Q Consensus 117 ~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
|+++++.+.|||+++|+++++++||+|||+ +++ ++++++|++|++.+++.....++..+..++...++|+.+++.+.
T Consensus 87 ~~~~~~~~~~d~~~~l~l~aa~~ALedAG~--~~~-~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 163 (434)
T 2gp6_A 87 QLTRIELRRMGYLQRMSTVLSRRLWENAGS--PEV-DTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMP 163 (434)
T ss_dssp SSCHHHHHTCCHHHHHHHHHHHHHHHHTTC--CCC-CTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHST
T ss_pred hCCHHHHHhCCHHHHHHHHHHHHHHHhcCC--Ccc-CCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccch
Confidence 689999999999999999999999999999 334 47899999999999988888888888778888899999999999
Q ss_pred hHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhh-ccccccCCCCCC
Q 011989 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSR-ALTTKYNGTPQE 275 (473)
Q Consensus 197 ~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 275 (473)
+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|.++.+..+..+...+ .++.. +..++.
T Consensus 164 ~~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~-~~~p~~ 242 (434)
T 2gp6_A 164 NGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTN-NDDPAG 242 (434)
T ss_dssp THHHHHHHHHSCCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCC-TTCTTT
T ss_pred hhHHHHHhhhhcCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCC-CCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999988888888888 55543 345678
Q ss_pred CCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011989 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 355 (473)
Q Consensus 276 ~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 355 (473)
.|+|||.+++|+++|||++++||++++.|+++|.+++++|.|++.++|+.+++.|++...++.++++++|+++|++++||
T Consensus 243 ~~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 322 (434)
T 2gp6_A 243 ACRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDI 322 (434)
T ss_dssp SCCSSBTTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTE
T ss_pred ceecccccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHc
Confidence 99999999999999999999999999999999999999999999999999988888888899999999999999999999
Q ss_pred cEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCC
Q 011989 356 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 435 (473)
Q Consensus 356 d~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 435 (473)
|||++|||||+.+|.+|..++.++|+.. ++++++.|.++||+++|+|++++++++++|+++++||++|+++|+|.+
T Consensus 323 d~ve~Hgtgt~~~D~~E~~al~~~fg~~----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~ 398 (434)
T 2gp6_A 323 DHVNAHATGTQVGDLAEGRAINNALGGN----RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEI 398 (434)
T ss_dssp EEEECCCCSCHHHHHHHHHHHHHHHTTC----CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTC
T ss_pred CEEEEeCCcCccchHHHHHHHHHHhccC----CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCC
Confidence 9999999999999999999999999753 689999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 436 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
++++++ .+.+..+++++++|||||||+|+|+||++|
T Consensus 399 ~~~~v~-~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 399 DLDVVA-GEPRPGNYRYAINNSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp CCEECC-SSCCCSCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CccccC-CCccCCCCCEEEEeCCcCCCeeEEEEEEeC
Confidence 999888 566677899999999999999999999986
No 18
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=100.00 E-value=3.2e-70 Score=602.99 Aligned_cols=400 Identities=21% Similarity=0.333 Sum_probs=351.9
Q ss_pred CCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC
Q 011989 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (473)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 117 (473)
+++|+||||||++|+|.++++||++|.+|++.+++.+ .+|+...|+ . ....+.+.+ ...||+.+|
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~-~~~~~~~~~----------~-~~~~g~~~~---~~~FD~~~f 67 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDD-RRWKAGLYG----------L-PRRSGKLKD---LSRFDASFF 67 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSS-SSSCTTGGG----------C-CSCEECCSC---SSCCCTTTT
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCC-ccccccccc----------C-cccccccCC---hhhcChhhc
Confidence 4789999999999999999999999999999999875 455543221 1 122344543 456999999
Q ss_pred -CCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhh
Q 011989 118 -LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (473)
Q Consensus 118 -~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+++++.+.|||+++|+++++++||+|||++++++ +..++||++|++.+++. .........+.++.+++...
T Consensus 68 ~i~~~ea~~mDp~~rL~leaa~eALedAGi~~~~i-~~~~~Gv~vG~~~~d~~-------~~~~~~~~~~~~~~~~g~~~ 139 (965)
T 3hhd_A 68 GVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSL-RGTHTGVWVGVSGSETS-------EALSRDPETLVGYSMVGCQR 139 (965)
T ss_dssp TCCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGG-TTSCCEEEEEECCCHHH-------HHHTSCTTTCCTHHHHHHST
T ss_pred CCCHHHHhhcCHHHHHHHHHHHHHHHHcCCChHHc-CCceeEEEEeccchhHH-------HHHhcCccccCccccccccc
Confidence 9999999999999999999999999999998887 48899999998765432 22334566778888889999
Q ss_pred hHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCC
Q 011989 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (473)
Q Consensus 197 ~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
+.++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||+|+|.++++.....+...+.++ +++.
T Consensus 140 ~~~a~ris~~lgl~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls------~~g~ 213 (965)
T 3hhd_A 140 AMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS------PEGT 213 (965)
T ss_dssp THHHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC------TTCC
T ss_pred chHHHHHHHHhCCCCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC------CCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988 6689
Q ss_pred CcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011989 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-ITQPHIDGKGAILAMTRALKQSGLQSHQV 355 (473)
Q Consensus 277 ~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-~~~~~~~~~~~~~a~~~al~~agl~~~dI 355 (473)
|+|||.+++|+++|||+++|||+++++|+ +||++|+|++.++|+.+ .....+...++.++++++|++||++|+||
T Consensus 214 ~~~Fd~~adG~~~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dI 289 (965)
T 3hhd_A 214 CKAFDTAGNGYCRSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESF 289 (965)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGE
T ss_pred cccchhccCCccccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHh
Confidence 99999999999999999999999999885 48999999999999975 33344567888999999999999999999
Q ss_pred cEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCC
Q 011989 356 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 435 (473)
Q Consensus 356 d~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 435 (473)
||||+|||||++||++|..++.++|+.. ...+++|+++|+++||+++|+|++++++++++|++++|||++|+++|+|.+
T Consensus 290 dyvEaHgTgT~~gD~~E~~Al~~~f~~~-~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i 368 (965)
T 3hhd_A 290 EYIEAHGTGTKVGDPQELNGITRALCAT-RQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEI 368 (965)
T ss_dssp EEEECCCCCCTTHHHHHHHHHHHHHCSS-CSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTC
T ss_pred ccccccCCCCCCCCHHHHHHHHHHhccc-CCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccC
Confidence 9999999999999999999999999854 235799999999999999999999999999999999999999999999998
Q ss_pred CC----C-CCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 436 ND----N-FMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 436 ~~----~-~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
++ . .++ .++++++.+++++|||||||+|+|+||+++
T Consensus 369 ~~~~~~~~~v~-~~~~~~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 369 PALLDGRLQVV-DQPLPVRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp HHHHHTSEEEC-CSCEECCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred cccccCceeec-CCCccCCCCeEEEecccCCCceEEEEeccC
Confidence 62 1 233 455666777999999999999999999986
No 19
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=100.00 E-value=5.4e-70 Score=598.99 Aligned_cols=415 Identities=23% Similarity=0.363 Sum_probs=363.3
Q ss_pred CCceEEEecceecccC-CCHHHHHHHHHcCCCceeeCCccc-cccCC-CCccccccccCCcccceeEEecCCCCCCCCCc
Q 011989 38 LRRVVVTGIGMVTPLG-CGAETTWRRLIVGECGIREITPED-LKMGN-FDRETQLHAFGQLTSKVAAVVPCGISSGEFNE 114 (473)
Q Consensus 38 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~ 114 (473)
.++|+||||||++|+| .++++||++|++|++.+++++..+ |+.+. |+++.. ..+..+.+.++++++ ...||+
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~--~~~~~~~~~~~~l~~---~~~FD~ 79 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPD--NPGTSYVDKGGFLDD---AAGFDA 79 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTT--STTCBSCCEEBCCSC---SSEECH
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccc--cCCCcccceeEEeCC---ccccCH
Confidence 4679999999999999 899999999999999999999877 75433 233221 123455677888875 456999
Q ss_pred ccC-CCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhh
Q 011989 115 DSW-LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPR 193 (473)
Q Consensus 115 ~~~-~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (473)
.+| +++++.+.|||+++|+++++++||+|||++++++ +..++|||+|++.+++.... .....++++.+++
T Consensus 80 ~~f~i~~~ea~~mdp~~rL~leaa~eALedAGi~~~~i-~~~~~gV~vG~~~~~~~~~~--------~~~~~~~~~~~~g 150 (915)
T 2qo3_A 80 EFFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSL-RGTATGVFLGVAKFGYGEDT--------AAAEDVEGYSVTG 150 (915)
T ss_dssp HHHTCCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGG-TTBCCEEEEECCCCCTTTTC--------C---CTTCHHHHT
T ss_pred hhcCCCHHHHHhCCHHHHHHHHHHHHHHHHcCCChHHc-CCcceEEEEEecCchHHhhh--------ccccccccccccc
Confidence 999 9999999999999999999999999999998877 47899999999876654221 1233567777888
Q ss_pred hhhhHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCC
Q 011989 194 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 273 (473)
Q Consensus 194 ~~~~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (473)
...+.++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||+|+|.++.+..+..+...+.++ +
T Consensus 151 ~~~~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls------~ 224 (915)
T 2qo3_A 151 VAPAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA------A 224 (915)
T ss_dssp TCHHHHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC------S
T ss_pred ccccHHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC------C
Confidence 8889999999999999999999999999999999999999999999999999999999998888888888887 5
Q ss_pred CCCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011989 274 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 353 (473)
Q Consensus 274 ~~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 353 (473)
++.|+|||.+++|+++|||+++|||+++++|+++|++|+++|+|++.++|+.+...+.+...++.++++++|+++|++|+
T Consensus 225 ~g~~~~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~ 304 (915)
T 2qo3_A 225 DGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPG 304 (915)
T ss_dssp SCCCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGG
T ss_pred CCCcccccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 68999999999999999999999999999999999999999999999999988776777888999999999999999999
Q ss_pred CccEEEEcCCCCCCCCHHHHHHHHHHhhccc-CCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCC
Q 011989 354 QVDYVNAHATSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 432 (473)
Q Consensus 354 dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~ 432 (473)
||||||+|||||+++|++|..++.++|+... ...+++++++|+++||+++|+|++++++++++|+++.|||++|+++|+
T Consensus 305 dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~ 384 (915)
T 2qo3_A 305 DVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPT 384 (915)
T ss_dssp GCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBC
T ss_pred HCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 9999999999999999999999999998532 235789999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcc---c----cCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 433 PIFNDNFMPL---T----ASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 433 ~~~~~~~~~~---~----~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
|.++++..++ . .++...++++++|||||||+|+|+||+++
T Consensus 385 p~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 431 (915)
T 2qo3_A 385 PHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEA 431 (915)
T ss_dssp TTSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred cccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeec
Confidence 9998752221 1 11234579999999999999999999986
No 20
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=100.00 E-value=7e-70 Score=598.22 Aligned_cols=404 Identities=25% Similarity=0.399 Sum_probs=355.8
Q ss_pred CceEEEecceecccC-CCHHHHHHHHHcCCCceeeCCccc-cccCCCCccccccccCCcccceeEEecCCCCCCCCCccc
Q 011989 39 RRVVVTGIGMVTPLG-CGAETTWRRLIVGECGIREITPED-LKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (473)
Q Consensus 39 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~ 116 (473)
++|+||||||++|+| .++++||++|++|++++++++..+ |.. ....++++++++ .+.||+.+
T Consensus 39 ~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~-------------~~~~~~~~~l~~---~~~fD~~~ 102 (917)
T 2hg4_A 39 EPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP-------------DPDARLGGMLAA---AGDFDAGF 102 (917)
T ss_dssp CCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC-------------CSSCCEEBCCTT---TTEECTGG
T ss_pred CCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC-------------CCCcceeeEecC---ccccChhh
Confidence 679999999999988 679999999999999999998876 521 122567888864 45699999
Q ss_pred C-CCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhh
Q 011989 117 W-LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 195 (473)
Q Consensus 117 ~-~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (473)
| +++++.+.|||+++|+++++++||+|||+++.++ +..++|||+|++..++.... ......+.++.+++..
T Consensus 103 f~i~~~ea~~mdp~~rl~leaa~eALedAGi~~~~i-~~~~~gV~vG~~~~d~~~~~-------~~~~~~~~~~~~~g~~ 174 (917)
T 2hg4_A 103 FGISPREALAMDPQQRIMLEISWEALERAGHDPVSL-RGSATGVFTGVGTVDYGPRP-------DEAPDEVLGYVGTGTA 174 (917)
T ss_dssp GTCCHHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGG-TTSCEEEEEEECCCCCSCCT-------TSSCGGGGGGHHHHHC
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChHHc-CCcceEEEEEeCCchhhhhh-------hcCccccCcccccccc
Confidence 9 9999999999999999999999999999998877 47899999999876543211 1234456677778888
Q ss_pred hhHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCC
Q 011989 196 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (473)
Q Consensus 196 ~~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (473)
.+.++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||+|+|.++.+.....+...+.++ +++
T Consensus 175 ~~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls------~~g 248 (917)
T 2hg4_A 175 SSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA------ADG 248 (917)
T ss_dssp HHHHHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC------TTS
T ss_pred cchHHHHHHHhcCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC------Ccc
Confidence 89999999999999999999999999999999999999999999999999999999998888888888877 568
Q ss_pred CCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011989 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 355 (473)
Q Consensus 276 ~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 355 (473)
.|+|||.+++|+++|||+++|||+++++|+++|++|+++|+|++.++|+.+...+.+...++.++++++|+++|++|+||
T Consensus 249 ~~~pFd~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dI 328 (917)
T 2hg4_A 249 RCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDV 328 (917)
T ss_dssp CCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGC
T ss_pred ccCcccccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence 99999999999999999999999999999999999999999999999998876667778899999999999999999999
Q ss_pred cEEEEcCCCCCCCCHHHHHHHHHHhhccc-CCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCC
Q 011989 356 DYVNAHATSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 434 (473)
Q Consensus 356 d~v~~hgtgt~~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 434 (473)
||||+|||||+.+|++|..++.++|+... ...+++++++|+++||+++|+|++++++++++|++++|||++|+++|+|.
T Consensus 329 d~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~ 408 (917)
T 2hg4_A 329 DYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQ 408 (917)
T ss_dssp CEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTT
T ss_pred CEEeeccCCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCcc
Confidence 99999999999999999999999998632 23578999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcc---ccCC----CCCCcEEEEeccccccceeeEEEeec
Q 011989 435 FNDNFMPL---TASK----DMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 435 ~~~~~~~~---~~~~----~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
++++..++ .+.+ ...++++++|||||||+|+|+||+++
T Consensus 409 i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 453 (917)
T 2hg4_A 409 IEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEA 453 (917)
T ss_dssp SCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred CCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccC
Confidence 98764221 2222 23579999999999999999999986
No 21
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=100.00 E-value=4.9e-68 Score=632.06 Aligned_cols=400 Identities=22% Similarity=0.322 Sum_probs=351.7
Q ss_pred CCceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC
Q 011989 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (473)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 117 (473)
|++|+||||||++|+|.++++||++|.+|++++++.+ .+|+...|+ ....++++++ ...||+.+|
T Consensus 1 m~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~-~~~~~~~~~-----------~~~~~g~~~~---~~~fd~~~f 65 (2512)
T 2vz8_A 1 MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADD-RRWKAGLYG-----------LPRRMGKLKD---LSRFDASFF 65 (2512)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECS-SSSCTTGGG-----------CCSEEECCSC---SSCCCTTTT
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCC-ccccccccc-----------CcccceecCC---cccCCHhhc
Confidence 3789999999999999999999999999999999964 456533211 1234566654 456999999
Q ss_pred -CCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhh
Q 011989 118 -LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (473)
Q Consensus 118 -~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (473)
+++++++.|||+++|+++++++||+|||+++.++ +..++|||+|++.+++.. ........++++.+++...
T Consensus 66 ~i~~~ea~~~dpq~rl~l~~~~eAle~Ag~~~~~~-~~~~~gv~~G~~~~~~~~-------~~~~~~~~~~~~~~~g~~~ 137 (2512)
T 2vz8_A 66 GVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASL-RGTSTGVWVGVSSSDASE-------ALSRDPETLVGYSMIGCQR 137 (2512)
T ss_dssp TCCHHHHHTSCHHHHHHHHHHHHHHGGGTCCGGGG-TTCSCEEEEEECCCHHHH-------HTTSCTTTSCGGGGGGTST
T ss_pred CCCHHHHHhcCHHHHHHHHHHHHHHHHCCCChhhc-CCCCeEEEEEeccHHHHH-------HHhcCccccCcceecccch
Confidence 9999999999999999999999999999987766 478999999998754321 2233456678888999999
Q ss_pred hHHHHHHHHhcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCC
Q 011989 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (473)
Q Consensus 197 ~~~a~~ia~~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
++++++|++.|||+||+++|+++|+|++.||++|+++|++|+||++||+|++.+++|..+..|...+.++ +++.
T Consensus 138 ~~~a~ris~~~~l~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls------~~g~ 211 (2512)
T 2vz8_A 138 AMMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS------QDGT 211 (2512)
T ss_dssp THHHHHHHHHHTCCSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC------TTCS
T ss_pred hHHHHHHHHHhCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC------CCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 6699
Q ss_pred CcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011989 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-ITQPHIDGKGAILAMTRALKQSGLQSHQV 355 (473)
Q Consensus 277 ~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-~~~~~~~~~~~~~a~~~al~~agl~~~dI 355 (473)
|+|||.+++|+++|||+++|||+++++|+ +||++|+|++.++||.+ .....+++.++.++|++||++||++|+||
T Consensus 212 c~~Fd~~adG~~~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i 287 (2512)
T 2vz8_A 212 CRSFDAEGTGYCRAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESL 287 (2512)
T ss_dssp CCSSSTTCCCBCBBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSC
T ss_pred CCCCCCCCCCcceeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence 99999999999999999999999999985 59999999999999963 22333468889999999999999999999
Q ss_pred cEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCC
Q 011989 356 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 435 (473)
Q Consensus 356 d~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 435 (473)
+|||+|||||++||++|..|+.++|+... ..+++|+|+|+++||+++|||++++||++++|+|++|||++|+++|+|.+
T Consensus 288 ~yveaHGTgT~~gD~~E~~al~~~f~~~~-~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~ 366 (2512)
T 2vz8_A 288 EYIEAHGTGTKVGDPQELNGIVNALCATR-REPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEI 366 (2512)
T ss_dssp CEEECCCCCCTTHHHHHHHHHHHHHCSCS-SSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTS
T ss_pred CEEEeecCCCCCCCHHHHHHHHHHhcccC-CCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccc
Confidence 99999999999999999999999998532 35799999999999999999999999999999999999999999999998
Q ss_pred C-CC----CCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 436 N-DN----FMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 436 ~-~~----~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
+ +. .++ .++++++.+++++|||||||+|+|+||+++
T Consensus 367 ~~~~~~~~~~~-~~~~~~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 367 PALQDGRLQVV-DRPLPIRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp SSSSSSSCEEC-CSCCBCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred cccccCceEec-CCCccCCCCeEEEeccCCCCceeEEEEccC
Confidence 6 43 122 345556667899999999999999999976
No 22
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=100.00 E-value=4.4e-60 Score=534.73 Aligned_cols=394 Identities=23% Similarity=0.255 Sum_probs=339.2
Q ss_pred CCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC-CCchhhhccCHHHH
Q 011989 53 GCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSIARFIA 131 (473)
Q Consensus 53 g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~~~~~~ 131 (473)
..+.++||..|.+|++.+.+.. ..++..++|+++.+ ||+.+| |++++.+.|||+++
T Consensus 1132 ~~~~~~~w~~L~~G~~~i~p~~------------------~~~~~~~aG~i~~~-----FD~~~fgI~~~ea~~mDp~~~ 1188 (1878)
T 2uv9_A 1132 IPETGQYTVRLRKGATLLIPKA------------------LQFDRLVAGQIPTG-----WDARRYGVPEDIIQQVDPVTL 1188 (1878)
T ss_dssp CTTTSCEEEEECTTCEEEEEEE------------------ECCSCCEEEECCTT-----CCHHHHTCCHHHHHHSCHHHH
T ss_pred CCChHHHHHHHHcCCCeeeecC------------------CCCcceEEEEeCCC-----CCHhhcCCCHHHHHhcCHHHH
Confidence 3567999999999999998832 23456789999742 999999 99999999999999
Q ss_pred HHHHHHHHHHHHcCCC-CCCC---CCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHH-h
Q 011989 132 YALCAADEALHDAKWL-PSDQ---GQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM-K 206 (473)
Q Consensus 132 la~~aa~~Al~dAgl~-~~~~---~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~ 206 (473)
|+++++++||+|||++ +.++ .+..++|+++|++.+++......+...... ..+.++.+++.+.|.++++|++ .
T Consensus 1189 l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~--~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1189 YVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLD--KPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTT--CCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhc--CCCCchhhhcchHHHHHHHHHHHh
Confidence 9999999999999997 5541 247899999999999987766655433322 3477888899999999999999 5
Q ss_pred cCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccc-----cCCCCCCCCcCcc
Q 011989 207 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-----YNGTPQEASRPFD 281 (473)
Q Consensus 207 lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~pfd 281 (473)
||++||+++++++|+|++.||+.|++.|++|+||++||||+|. .++.....|..+++++.. .+..|++.||||+
T Consensus 1267 lg~~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd 1345 (1878)
T 2uv9_A 1267 LSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTS 1345 (1878)
T ss_dssp CCCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSB
T ss_pred cCCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCc
Confidence 9999999999999999999999999999999999999999998 678888889998888742 2345789999999
Q ss_pred CCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCC-h--------------------------
Q 011989 282 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID-G-------------------------- 334 (473)
Q Consensus 282 ~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~-~-------------------------- 334 (473)
..++||+.|||++++||++.+.|+++|.+||++|.|++.++|+.+.+.|.+. +
T Consensus 1346 ~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~ 1425 (1878)
T 2uv9_A 1346 TTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQL 1425 (1878)
T ss_dssp TTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHH
T ss_pred cCCCCCcccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHH
Confidence 9999999999999999999999999999999999999999999865443330 0
Q ss_pred ----------------------------------------HHHH-------------------------------HHHHH
Q 011989 335 ----------------------------------------KGAI-------------------------------LAMTR 343 (473)
Q Consensus 335 ----------------------------------------~~~~-------------------------------~a~~~ 343 (473)
.++. .++++
T Consensus 1426 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ 1505 (1878)
T 2uv9_A 1426 ELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRG 1505 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHH
T ss_pred HHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHH
Confidence 0111 78999
Q ss_pred HHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhc--ccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 344 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD--HATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 344 al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~--~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
||+.+||+++|||||++|||||++||++|..+|.++|+. ...+.+++++++|+++||+.||+|+.++++++++|++|+
T Consensus 1506 ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~ 1585 (1878)
T 2uv9_A 1506 ALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGI 1585 (1878)
T ss_dssp HHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCE
T ss_pred HHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999985 223467999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCC-CCCCCcc-ccCCC-CCCcEEEEeccccccceeeEEEeec
Q 011989 422 APLTLNLAKPDPIF-NDNFMPL-TASKD-MPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 422 ipp~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
|||++|+++|+|.+ +++++.+ .+.+. .+++++++|||||||+|+|+||+++
T Consensus 1586 iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1639 (1878)
T 2uv9_A 1586 VPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHP 1639 (1878)
T ss_dssp ECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred CCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecC
Confidence 99999999999998 4666521 23322 3689999999999999999999875
No 23
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=100.00 E-value=1.1e-59 Score=532.84 Aligned_cols=400 Identities=22% Similarity=0.265 Sum_probs=340.9
Q ss_pred CceEEEecceecccCCCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC-
Q 011989 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW- 117 (473)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~- 117 (473)
++|+|++ ..+.++||.+|.+|++.+.+.+ ..++.+++|+++. .||+.+|
T Consensus 1150 ~~~~I~~-------~~~~~~~w~~L~~G~~~i~p~~------------------~~~~~~~aG~i~~-----~FD~~~fg 1199 (1887)
T 2uv8_A 1150 DKVDIFE-------IPETGEYSVKLLKGATLYIPKA------------------LRFDRLVAGQIPT-----GWNAKTYG 1199 (1887)
T ss_dssp GGEEEEE-------CTTTSCEEEEECTTCEEEEEEE------------------ECCSCCEEECCCT-----TCCTTTTT
T ss_pred CceeEee-------cCchHHHHHHHHcCCceeeccc------------------CCCCccEEEEECC-----CCChhhcC
Confidence 3566663 2457899999999999998842 2345678899874 2999999
Q ss_pred CCchhhhccCHHHHHHHHHHHHHHHHcCCC-CCC----CCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchh
Q 011989 118 LNSKDHRSIARFIAYALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIP 192 (473)
Q Consensus 118 ~~~~~~~~~~~~~~la~~aa~~Al~dAgl~-~~~----~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (473)
|++++.+.|||+++|+++++++||+|||++ +.+ + +..++||++|++.+++......+...... ..+.++.++
T Consensus 1200 I~~~ea~~mDp~~~l~L~aa~eAL~dAGi~dp~e~~~~i-~~s~vGv~vGs~~gg~~~~~~~~~~~~~~--~~v~~~~~~ 1276 (1887)
T 2uv8_A 1200 ISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYV-HVSEVGNCSGSGMGGVSALRGMFKDRFKD--EPVQNDILQ 1276 (1887)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHHHTTCSSGGGHHHHS-CGGGEEECCEESSCCHHHHHHHHTTTTTT--CCCCTTHHH
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCChhhhhccc-CCceeEEEeccCCccHHHHHHHHHHHHhc--CCCCcchhh
Confidence 999999999999999999999999999995 555 3 47899999999999987766655433222 347788888
Q ss_pred hhhhhHHHHHHHH-hcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccc---
Q 011989 193 RILINMASGHVSM-KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK--- 268 (473)
Q Consensus 193 ~~~~~~~a~~ia~-~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~--- 268 (473)
..+.|.++++|++ .||++||+++++++|+|++.||+.|++.|++|+||++||||+|. +++.....|..++.++..
T Consensus 1277 ~~~~n~~aa~is~~~lgl~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e 1355 (1887)
T 2uv8_A 1277 ESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEE 1355 (1887)
T ss_dssp HHSTTHHHHHHHHHTTCCCSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHH
T ss_pred cchhhHHHHHHHHHHcCCccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhh
Confidence 8899999999999 59999999999999999999999999999999999999999998 577778889998888742
Q ss_pred --cCCCCCCCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCC-------------
Q 011989 269 --YNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID------------- 333 (473)
Q Consensus 269 --~~~~~~~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~------------- 333 (473)
.+..|++.||||+..++|+++|||++++||++.+.|+++|.+||++|.|++.++|+.+.+.|.+.
T Consensus 1356 ~~~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~ 1435 (1887)
T 2uv8_A 1356 FEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSS 1435 (1887)
T ss_dssp HHTTCCGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSC
T ss_pred hcccCCCccCcCCCcccCCCcccccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccc
Confidence 13447789999999999999999999999999999999999999999999999998865433321
Q ss_pred -----h-------------------------------------------HHH----------------------------
Q 011989 334 -----G-------------------------------------------KGA---------------------------- 337 (473)
Q Consensus 334 -----~-------------------------------------------~~~---------------------------- 337 (473)
. .++
T Consensus 1436 gt~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~ 1515 (1887)
T 2uv8_A 1436 VKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKR 1515 (1887)
T ss_dssp CSSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTT
T ss_pred cCCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhc
Confidence 1 011
Q ss_pred ---HHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhc--ccCCCCceeeccccchhhhHHhHHHHHHHH
Q 011989 338 ---ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD--HATSGSLAFSSTKGAIGHLLGAAGAVEAIF 412 (473)
Q Consensus 338 ---~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~--~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~ 412 (473)
..++++||+++||+++|||||++|||||++||++|..+|.++|+. ...+.++++++.|+++||+.||+|+.++++
T Consensus 1516 d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~ 1595 (1887)
T 2uv8_A 1516 DPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNG 1595 (1887)
T ss_dssp CSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHH
Confidence 368999999999999999999999999999999999999999975 223457999999999999999999999999
Q ss_pred HHHHHHhCccCCCCCCCCCCCCCC-CCCCcc-ccCCC-CCCcEEEEeccccccceeeEEEeec
Q 011989 413 AVLAIHHGVAPLTLNLAKPDPIFN-DNFMPL-TASKD-MPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 413 ~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~-~~~~~-~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
++++|++|.|||++|+++|+|.++ ++++.+ .+.+. .+++++++|||||||+|+|+||+++
T Consensus 1596 ~ll~L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1658 (1887)
T 2uv8_A 1596 ALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1658 (1887)
T ss_dssp HHHHHTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred HHHHHHhCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecC
Confidence 999999999999999999999984 665421 33333 3689999999999999999999875
No 24
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-62 Score=532.26 Aligned_cols=393 Identities=22% Similarity=0.264 Sum_probs=332.5
Q ss_pred CCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC-CCchhhhccCHHHHH
Q 011989 54 CGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSIARFIAY 132 (473)
Q Consensus 54 ~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~~~~~~l 132 (473)
.+.++||+.|.+|++.+.+.. ..++.+++|++++ .||+.+| |+++..+.|||+++|
T Consensus 959 ~~~eefW~~L~~G~~~i~p~~------------------~~~~~~vaG~Ip~-----gFD~~~fGIs~~ea~~mDP~qrL 1015 (1688)
T 2pff_A 959 PETGEYSVKLLKGATLYIPKA------------------LRFDRLVAGQIPT-----GWNAKTYGISDDIISQVDPITLF 1015 (1688)
T ss_dssp CCCCSSSCCCCCCTTCCCCCC------------------CCEECCSSCSCCC-----CCCCCCSSCCTTTBTTBCSSTTH
T ss_pred CCHHHHHHHHHcCCCEEecCC------------------CCCCceEEEEECC-----CCChhhCCCCHHHHhccCHHHHH
Confidence 357899999999999988732 2344566778863 3999999 999999999999999
Q ss_pred HHHHHHHHHHHcCCC-CCCC---CCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHH-hc
Q 011989 133 ALCAADEALHDAKWL-PSDQ---GQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM-KY 207 (473)
Q Consensus 133 a~~aa~~Al~dAgl~-~~~~---~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~l 207 (473)
+++++++||+|||++ +.++ .+..++||++|++.+++......+..... ...+++..++..+.|.++++++. .|
T Consensus 1016 aLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~--~~~v~~~~l~~~~~nt~Aa~Vs~~~L 1093 (1688)
T 2pff_A 1016 VLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK--DEPVQNDILQESFINTMSAWVNMLLI 1093 (1688)
T ss_dssp HHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSS--CCCCCSTTHHHHCTHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHh--cCCCCcchhccccHHHHHHHHHHHHc
Confidence 999999999999997 5541 24789999999999988776665543322 23477888888899999999999 79
Q ss_pred CCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccc-----cCCCCCCCCcCccC
Q 011989 208 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-----YNGTPQEASRPFDC 282 (473)
Q Consensus 208 gl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~pfd~ 282 (473)
|++||+++++++|+|++.||+.|+++|++|+||++||||+|.+ ++.....|..+++++.. .+..|++.|||||.
T Consensus 1094 Gl~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~m-sp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~ 1172 (1688)
T 2pff_A 1094 SSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDF-QEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATT 1172 (1688)
T ss_dssp CCCCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCC-CTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSS
T ss_pred CCcCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccC-CHHHHHHHHhccccccChhhhhcCCChhhccCcCcc
Confidence 9999999999999999999999999999999999999999985 56556667788877642 13347889999999
Q ss_pred CCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCC--------------------C---------
Q 011989 283 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI--------------------D--------- 333 (473)
Q Consensus 283 ~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~--------------------~--------- 333 (473)
+++|+++|||++++||++.+.|+++|.+||++|.|++.++|+.+.+.|.+ .
T Consensus 1173 ~rdGfv~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rq 1252 (1688)
T 2pff_A 1173 TRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQ 1252 (1688)
T ss_dssp SCCCCCCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHH
T ss_pred CCCCCccccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHH
Confidence 99999999999999999999999999999999999999999875432221 1
Q ss_pred --------------------------------hHHH-------------------------------HHHHHHHHHHcCC
Q 011989 334 --------------------------------GKGA-------------------------------ILAMTRALKQSGL 350 (473)
Q Consensus 334 --------------------------------~~~~-------------------------------~~a~~~al~~agl 350 (473)
..++ ..++++||+++||
T Consensus 1253 l~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGL 1332 (1688)
T 2pff_A 1253 LVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGL 1332 (1688)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCS
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCC
Confidence 0011 3679999999999
Q ss_pred CCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcc--cCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCC
Q 011989 351 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDH--ATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNL 428 (473)
Q Consensus 351 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~--~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~ 428 (473)
+++||||||+|||||++||++|..+|.++|+.. ..+.++++++.|+++||+.||||+.++++++++|++|.|||++|+
T Consensus 1333 tpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~ 1412 (1688)
T 2pff_A 1333 TIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNA 1412 (1688)
T ss_dssp STTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCC
T ss_pred CHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999999999999852 234579999999999999999999999999999999999999999
Q ss_pred CCCCCCCC-CCCCcc-ccCCCC-CCcEEEEeccccccceeeEEEeec
Q 011989 429 AKPDPIFN-DNFMPL-TASKDM-PISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 429 ~~~~~~~~-~~~~~~-~~~~~~-~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
++|+|.++ ++.+.+ .+.+.. +++++++|||||||+|+|+||+++
T Consensus 1413 d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p 1459 (1688)
T 2pff_A 1413 DNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1459 (1688)
T ss_dssp SCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECS
T ss_pred CCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCC
Confidence 99999994 565521 333333 689999999999999999999875
No 25
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=100.00 E-value=5.3e-56 Score=525.44 Aligned_cols=413 Identities=21% Similarity=0.290 Sum_probs=342.2
Q ss_pred ccCCCHHHHHHHHHcCCCc--eeeCCc-cccccCCCCccc-cccccCCcccceeEEecCCCCCCCCCcccC-CCchhhhc
Q 011989 51 PLGCGAETTWRRLIVGECG--IREITP-EDLKMGNFDRET-QLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRS 125 (473)
Q Consensus 51 p~g~~~~~~~~~l~~G~s~--i~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~ 125 (473)
+.-.+.++.|+...++.+. |.+.+. ..|+...++... ..-....++.+++|++++ .||+.+| |++++.+.
T Consensus 2569 ~~~~s~~~a~~~~~~~~~~~~i~~~~~~~~W~~~~~~~~~i~~p~~~~~~~~~gG~i~d-----~FD~~~fgIs~rea~~ 2643 (3089)
T 3zen_D 2569 FVVSSEADARAFVQFDPEHTVARPLPDSSDWEVTRKAGTEIRVPRKTKLSRTVGAQIPT-----GFDPTVWGISPDMASS 2643 (3089)
T ss_dssp CEEECHHHHHHHHTTSTTSEEEEECTTTCCEEEEECTTCEEEEEEEECCSCCEEECCCT-----TCCTTTTTCCHHHHHH
T ss_pred cccCCHHHHHHHHHhCCCcceEEeCCCCcceeeeecCCCCcCCCCcCCccceEEEEcCC-----CCChhhcCCCHHHHHh
Confidence 3445788888888775544 455655 567644332221 111234567788999974 3999999 99999999
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCC---CCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHH
Q 011989 126 IARFIAYALCAADEALHDAKWLPSDQG---QKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH 202 (473)
Q Consensus 126 ~~~~~~la~~aa~~Al~dAgl~~~~~~---~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 202 (473)
|||+++|+++++++||+|||+++.+++ +..++||++|++.++.......+..+.. +....++ .++..+.+.++++
T Consensus 2644 mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~aa~ 2721 (3089)
T 3zen_D 2644 IDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLL-GRAKPND-ILQEVLPNVVAAH 2721 (3089)
T ss_dssp SCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHT-TCCCCTT-HHHHTSTTHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhc-CCCccch-hhccccccHHHHH
Confidence 999999999999999999999887652 4789999999999998877776665544 2333333 5677788999999
Q ss_pred HHH-hcCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhcccc-----ccCCCCCCC
Q 011989 203 VSM-KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT-----KYNGTPQEA 276 (473)
Q Consensus 203 ia~-~lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 276 (473)
++. .||++||+++|+++|+|++.||++|+++|++|+||++||+|+|. +++..+..|..++.++. ..+..++..
T Consensus 2722 is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~~ 2800 (3089)
T 3zen_D 2722 VMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSKF 2800 (3089)
T ss_dssp HHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTTS
T ss_pred HHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhhhhccCCcccc
Confidence 986 45999999999999999999999999999999999999999999 78888888888887763 224567899
Q ss_pred CcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCCh-------HHHHHHHHHHHHHcC
Q 011989 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDG-------KGAILAMTRALKQSG 349 (473)
Q Consensus 277 ~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~-------~~~~~a~~~al~~ag 349 (473)
|+|||.+++|+++|||+++|||+++++|+++|++||++|.+.+.++|+.+.+.+.+.. .++.++++++|+++|
T Consensus 2801 crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AG 2880 (3089)
T 3zen_D 2801 SRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLARSLAQLG 2880 (3089)
T ss_dssp CCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTT
T ss_pred cCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999998876655531 245678999999999
Q ss_pred CCCCCccEEEEcCCCCCCCCHHHHH---HHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCC
Q 011989 350 LQSHQVDYVNAHATSTPLGDTVEAT---AIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTL 426 (473)
Q Consensus 350 l~~~dId~v~~hgtgt~~~D~~E~~---a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~ 426 (473)
++++||||||+|||||++||++|.. ++.+.|+.. .+.+++|+++|+++||++||||++++++++++|++++|||++
T Consensus 2881 l~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~-~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~ 2959 (3089)
T 3zen_D 2881 VGADDIAVISKHDTSTLANDPNETELHERIADSMGRA-PGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNR 2959 (3089)
T ss_dssp CCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCC-TTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCT
T ss_pred CCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCcc-CCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCC
Confidence 9999999999999999999999999 678888753 235799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCC--CCccccC----CCCCCcEEEEeccccccceeeEEEeec
Q 011989 427 NLAKPDPIFNDN--FMPLTAS----KDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 427 ~~~~~~~~~~~~--~~~~~~~----~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
|+++++|.++.+ +....+. +..++|++++|||||||+|+|+||+++
T Consensus 2960 ~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~ 3011 (3089)
T 3zen_D 2960 SLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHP 3011 (3089)
T ss_dssp TCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECG
T ss_pred CCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecC
Confidence 999999998721 1110222 244589999999999999999999986
No 26
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=3e-35 Score=297.39 Aligned_cols=274 Identities=20% Similarity=0.243 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
..+|+++|+++||+|||+++++++ +|++|+..+... ..+.++.+++..||
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id-----~v~~g~~~~~~~-------------------------~~~~~a~~va~~lG 75 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVE-----DVYAGCANQAGE-------------------------DNRNVARMALLLAG 75 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCSST-------------------------TTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCCC-------------------------CCChHHHHHHHHhC
Confidence 467999999999999999888776 899998653311 02456889999999
Q ss_pred C--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcC-hHH--------------H----------HHHh-
Q 011989 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS--------------M----------AGFC- 260 (473)
Q Consensus 209 l--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~~--------------~----------~~~~- 260 (473)
+ ++|+++++++|+|++.||.+|+++|++|++|++||+|+|.++. |.. + ..+.
T Consensus 76 l~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p 155 (401)
T 1ulq_A 76 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQ 155 (401)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHH
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccc
Confidence 9 7899999999999999999999999999999999999997654 210 0 0110
Q ss_pred -h-----hhcc---------------------cc----------ccCC----------------CCCC------------
Q 011989 261 -K-----SRAL---------------------TT----------KYNG----------------TPQE------------ 275 (473)
Q Consensus 261 -~-----~~~~---------------------~~----------~~~~----------------~~~~------------ 275 (473)
. ++.. +. .+.. .+++
T Consensus 156 ~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~ 235 (401)
T 1ulq_A 156 ALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLA 235 (401)
T ss_dssp HHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHH
T ss_pred cccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHh
Confidence 0 0000 00 0000 0111
Q ss_pred CCcC-ccCCCCcee-------eccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHH
Q 011989 276 ASRP-FDCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 347 (473)
Q Consensus 276 ~~~p-fd~~~~G~~-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~ 347 (473)
.++| ||. +|++ ++|||++|||++++.|+++|.+++++|.|++.+++. |+..+.+...+++++|++
T Consensus 236 ~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~ 308 (401)
T 1ulq_A 236 ALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVP-----PRIMGIGPVPATRKALER 308 (401)
T ss_dssp HSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHH
T ss_pred hCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCC-----ccccchhHHHHHHHHHHH
Confidence 3456 764 6777 799999999999999999999999999999998863 333345668999999999
Q ss_pred cCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCC
Q 011989 348 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 427 (473)
Q Consensus 348 agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~ 427 (473)
+|++++||||||+|.+.+. .|...++. |+......+++++..+..+||++||+|+.++++++++|+++
T Consensus 309 Agl~~~dId~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~------- 376 (401)
T 1ulq_A 309 AGLSFSDLGLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR------- 376 (401)
T ss_dssp TTCCGGGCSEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT-------
T ss_pred cCCCHHHcCEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc-------
Confidence 9999999999999955543 24444433 34311123556666666899999999999999999999985
Q ss_pred CCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 428 LAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
+.+++|++++++||.++++||+++
T Consensus 377 ---------------------~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 377 ---------------------KVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp ---------------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ---------------------CCCEEEEEeecCCcccEEEEEEeC
Confidence 257999999999999999999985
No 27
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=8e-35 Score=293.84 Aligned_cols=270 Identities=23% Similarity=0.326 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
..+|+++|+++||+|||+++++++ ++++|+..+... ...++.+++..||
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~id-----~v~~g~~~~~~~--------------------------~~~~a~~ia~~lg 78 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPEDVS-----EVIFGHVLAAGC--------------------------GQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTTS--------------------------CSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCCC--------------------------CCHHHHHHHHHcC
Confidence 368999999999999999887776 789988654211 1346779999999
Q ss_pred C--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcCh-HHH--------------H-----H----H--h
Q 011989 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA-LSM--------------A-----G----F--C 260 (473)
Q Consensus 209 l--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~-~~~--------------~-----~----~--~ 260 (473)
+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++.. ... . . + .
T Consensus 79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (397)
T 1wl4_A 79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC 158 (397)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCC
T ss_pred CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccc
Confidence 9 79999999999999999999999999999999999999986531 100 0 0 0 0
Q ss_pred hhhcccc-------------------------------cc-------------------CCCCCC---------CCcC-c
Q 011989 261 KSRALTT-------------------------------KY-------------------NGTPQE---------ASRP-F 280 (473)
Q Consensus 261 ~~~~~~~-------------------------------~~-------------------~~~~~~---------~~~p-f 280 (473)
.++.+++ .+ .+.+.. .++| |
T Consensus 159 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf 238 (397)
T 1wl4_A 159 HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYF 238 (397)
T ss_dssp BHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSS
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 0111100 00 011111 4889 9
Q ss_pred cCCCCcee-------eccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011989 281 DCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 353 (473)
Q Consensus 281 d~~~~G~~-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 353 (473)
|.+++|++ ++||+++|||++++.|+++|.+++++|.|++.+++ .|++...+...+++++|+++|++++
T Consensus 239 d~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (397)
T 1wl4_A 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSLE 313 (397)
T ss_dssp CCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCHH
Confidence 99999999 99999999999999999999999999999999873 4555556778999999999999999
Q ss_pred CccEEEEcCCCCCCCCHHHH--HHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCC
Q 011989 354 QVDYVNAHATSTPLGDTVEA--TAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 431 (473)
Q Consensus 354 dId~v~~hgtgt~~~D~~E~--~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~ 431 (473)
||||||+| |..|. .++.+.|+... .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ie~~-------d~f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~----------- 373 (397)
T 1wl4_A 314 DVDIFEIN-------EAFAAVSAAIVKELGLNP--EKVNIEGGAIALGHPLGASGCRILVTLLHTLERM----------- 373 (397)
T ss_dssp GCCEEEEC-------CSBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-----------
T ss_pred HCCEEEEe-------cccHHHHHHHHHHcCCCC--cCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc-----------
Confidence 99999998 33344 33667777542 3688899999999999999999999999999973
Q ss_pred CCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 432 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
+.+++|+++.+.||...++||++
T Consensus 374 -----------------~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 374 -----------------GRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp -----------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred -----------------CCCEEEEEEecccchheEEEEEe
Confidence 24688888888899999999987
No 28
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=4e-35 Score=295.40 Aligned_cols=276 Identities=19% Similarity=0.268 Sum_probs=215.5
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhc
Q 011989 129 FIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (473)
Q Consensus 129 ~~~la~~aa~~Al~dA-gl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 207 (473)
..+|+++++++||+|| |+++++++ +|++|+..+... ..+.++.+++..|
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id-----~v~~g~~~~~~~-------------------------~~~~~a~~ia~~l 79 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVE-----DVIWGCVNQTLE-------------------------QGWNIARMASLMT 79 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE-----EEEEECSSBSBT-------------------------TTTTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-----EEEEEeeccccC-------------------------CCCcHHHHHHHHc
Confidence 4789999999999999 99877665 899998653211 1245788999999
Q ss_pred CC--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcC-hHHH------------------HHHhhhhc--
Q 011989 208 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSM------------------AGFCKSRA-- 264 (473)
Q Consensus 208 gl--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~~~------------------~~~~~~~~-- 264 (473)
|+ ++|+++++++|+|++.||.+|+++|++|++|++||+|+|.++. +... ......+.
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 159 (390)
T 1wdk_C 80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGK 159 (390)
T ss_dssp SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHH
T ss_pred CCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHH
Confidence 99 8999999999999999999999999999999999999997643 2110 01100000
Q ss_pred ---cccc---------------------cCCC--C------CCCCcCccCC---------------------CCcee---
Q 011989 265 ---LTTK---------------------YNGT--P------QEASRPFDCG---------------------RDGFV--- 288 (473)
Q Consensus 265 ---~~~~---------------------~~~~--~------~~~~~pfd~~---------------------~~G~~--- 288 (473)
++.. +..+ | .+.++|||.+ ++|++
T Consensus 160 ~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~ 239 (390)
T 1wdk_C 160 MHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAG 239 (390)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGG
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEech
Confidence 1100 0000 1 1122689887 79999
Q ss_pred ----eccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEEcCCC
Q 011989 289 ----IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 364 (473)
Q Consensus 289 ----~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtg 364 (473)
++||+++|||++++.|+++|.+++++|.|++.+++ .|++...+...+++++|+++|++++||||||+|.+.
T Consensus 240 ~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f 314 (390)
T 1wdk_C 240 TSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGV-----DPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAF 314 (390)
T ss_dssp GBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSB
T ss_pred hcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEecc-----ChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccCC
Confidence 99999999999999999999999999999999874 344445667899999999999999999999999776
Q ss_pred CCCCCHHHHHHHHHHhhcccC-CCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCCCCCccc
Q 011989 365 TPLGDTVEATAIRTVFSDHAT-SGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLT 443 (473)
Q Consensus 365 t~~~D~~E~~a~~~~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~ 443 (473)
+. |..++.+.|+.... ..++++++.|.++||++||+|+.++++++++|+++
T Consensus 315 ~~-----~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~----------------------- 366 (390)
T 1wdk_C 315 AA-----QALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN----------------------- 366 (390)
T ss_dssp HH-----HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HH-----HHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc-----------------------
Confidence 53 56666777764310 12567788899999999999999999999999974
Q ss_pred cCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 444 ASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 444 ~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
+.++.++.+.+.||.+.++||++.
T Consensus 367 -----~~~~gl~~~~~ggG~~~a~~~~~~ 390 (390)
T 1wdk_C 367 -----GGTFGLSTMCIGLGQGIATVFERV 390 (390)
T ss_dssp -----TCSEEEEEEEETTTEEEEEEEECC
T ss_pred -----CCCEEEEEecccchheEEEEEEeC
Confidence 235778888888999999999863
No 29
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=1.1e-33 Score=287.56 Aligned_cols=274 Identities=19% Similarity=0.275 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
..+|+++|+++||+|||+++.+++ +|++|+..++.. ..+.++.+++..||
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id-----~vi~g~~~~~~~-------------------------~~~~~a~~va~~lG 104 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVG-----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 104 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----CEEEECCSSBHH-------------------------HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCccC-------------------------CCChHHHHHHHHcC
Confidence 468999999999999999888776 799998653211 12456789999999
Q ss_pred C--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChH--------------HH-------HHH------
Q 011989 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL--------------SM-------AGF------ 259 (473)
Q Consensus 209 l--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~--------------~~-------~~~------ 259 (473)
+ ++|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++... .+ ...
T Consensus 105 l~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~ 184 (442)
T 2wu9_A 105 FPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVA 184 (442)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHH
T ss_pred CCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHH
Confidence 9 789999999999999999999999999999999999999765411 00 000
Q ss_pred ----------------hh--------hhccccccC------------------CCCCC------------CCcC-ccCCC
Q 011989 260 ----------------CK--------SRALTTKYN------------------GTPQE------------ASRP-FDCGR 284 (473)
Q Consensus 260 ----------------~~--------~~~~~~~~~------------------~~~~~------------~~~p-fd~~~ 284 (473)
+. .+.+..... ...++ .++| |+.
T Consensus 185 ~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~-- 262 (442)
T 2wu9_A 185 QRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK-- 262 (442)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT--
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC--
Confidence 00 001100000 00011 3445 764
Q ss_pred Ccee-------eccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 011989 285 DGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 357 (473)
Q Consensus 285 ~G~~-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 357 (473)
+|++ ++||+++|||++++.|+++|.+|+++|.|++.+.+ .|+....+...+++++|+++|++++||||
T Consensus 263 ~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DId~ 337 (442)
T 2wu9_A 263 DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGV-----DPAIMGIGPAVAIPAAVKAAGLELDDIDL 337 (442)
T ss_dssp TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHTTCCGGGCCE
T ss_pred CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecC-----CchhcchHHHHHHHHHHHHcCCCHHHCCE
Confidence 6777 69999999999999999999999999999999886 34444567789999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCC
Q 011989 358 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 437 (473)
Q Consensus 358 v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~ 437 (473)
||+|+++|.. |..+++. |+... .++.++..+..+||++||+|+.++++++++|+++. |
T Consensus 338 iE~h~aft~~----~l~~~~~-lG~~~--~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~-~-------------- 395 (442)
T 2wu9_A 338 FEINEAFASQ----FVYCRNK-LGLDP--EKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG-K-------------- 395 (442)
T ss_dssp EEECCSBHHH----HHHHHHH-HTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC-T--------------
T ss_pred EEEeCCChHH----HHHHHHH-hCCCC--CCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC-C--------------
Confidence 9999998864 7777754 45321 13444444448999999999999999999999853 0
Q ss_pred CCCccccCCCCCCcEEEE-eccccccceeeEEEeecC
Q 011989 438 NFMPLTASKDMPISAALS-NSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 438 ~~~~~~~~~~~~~~~~l~-~s~g~gG~~~~~vl~~~~ 473 (473)
+.+++|+ +++| ||.|+++||++++
T Consensus 396 -----------~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 -----------DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp -----------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred -----------CCCEEEEEeecc-cchheEEEEEecc
Confidence 3568885 5677 8999999999874
No 30
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=2.8e-34 Score=289.49 Aligned_cols=270 Identities=20% Similarity=0.284 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
..+|+++++++||+|||+++++++ ++++|+..+.. ....++.+++..+|
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id-----~~~~g~~~~~~--------------------------~~~~~a~~ia~~lg 75 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVN-----EVILGQVLPAG--------------------------EGQNPARQAAMKAG 75 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------CCcHHHHHHHHHcC
Confidence 468999999999999999887776 78888755321 01346789999999
Q ss_pred CC--CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH----H--------HHh--------------
Q 011989 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM----A--------GFC-------------- 260 (473)
Q Consensus 209 l~--Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~----~--------~~~-------------- 260 (473)
++ +|+++++++|+|++.||.+|+++|++|++|+|||+|+|.++..... . .+.
T Consensus 76 l~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T 2vu1_A 76 VPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGY 155 (392)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCC
T ss_pred CCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccc
Confidence 99 8999999999999999999999999999999999999976541110 0 000
Q ss_pred hhhcc----------cc---------------------ccCCC--C-----CCCCcCccCC-------------------
Q 011989 261 KSRAL----------TT---------------------KYNGT--P-----QEASRPFDCG------------------- 283 (473)
Q Consensus 261 ~~~~~----------~~---------------------~~~~~--~-----~~~~~pfd~~------------------- 283 (473)
.++.+ +. .+..+ | ...++|||.+
T Consensus 156 ~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~ 235 (392)
T 2vu1_A 156 HMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAF 235 (392)
T ss_dssp BHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 01111 00 00000 0 0126788877
Q ss_pred -CCcee-------eccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011989 284 -RDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 355 (473)
Q Consensus 284 -~~G~~-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 355 (473)
++|++ ++||++++||++++.|+++|.+++++|.|++.+.+ .|+....+...+++++|+++|++++||
T Consensus 236 ~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~dI 310 (392)
T 2vu1_A 236 DKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGDL 310 (392)
T ss_dssp CTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGC
T ss_pred CCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeec-----ChhhcchhHHHHHHHHHHHcCCCHHHc
Confidence 77999 99999999999999999999999999999998873 344455667899999999999999999
Q ss_pred cEEEEcCCCCCCCCHHHHHH--HHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCC
Q 011989 356 DYVNAHATSTPLGDTVEATA--IRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 433 (473)
Q Consensus 356 d~v~~hgtgt~~~D~~E~~a--~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 433 (473)
||||+| |..|..+ +.+.|+... .++++++.|.++||++||+|+.++++++++|+++
T Consensus 311 d~ie~~-------d~f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------- 368 (392)
T 2vu1_A 311 DLVEAN-------EAFAAQACAVNKDLGWDP--SIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR------------- 368 (392)
T ss_dssp SEEEEC-------CSBHHHHHHHHHHHCCCG--GGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH-------------
T ss_pred CEEEec-------cccHHHHHHHHHHcCCCc--ccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc-------------
Confidence 999999 5555555 355666432 3678889999999999999999999999999973
Q ss_pred CCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 434 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
..+++|++....||.+.++||++
T Consensus 369 ---------------~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 369 ---------------GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp ---------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ---------------CCCEEEEEEecccchheEEEEEe
Confidence 23578876655689999999986
No 31
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=7.5e-33 Score=280.61 Aligned_cols=272 Identities=20% Similarity=0.250 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
..+|+++|+++||+|||+++++++ +|++|+..+.. ..+..+..++..+|
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id-----~v~~g~~~~~~--------------------------~~~~~a~~~a~~lG 103 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLG-----DICVGNVLQPG--------------------------AGAIMARIAQFLSD 103 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----CEEEECSSSBG--------------------------GGHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCcc--------------------------ccccHHHHHHHHcC
Confidence 578999999999999999988876 89999865321 12345567788899
Q ss_pred C--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH---------H------------HHH---hh-
Q 011989 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS---------M------------AGF---CK- 261 (473)
Q Consensus 209 l--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~---------~------------~~~---~~- 261 (473)
+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++.... + ..+ ..
T Consensus 104 l~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a 183 (418)
T 2iik_A 104 IPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVA 183 (418)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHH
T ss_pred CCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHH
Confidence 9 7899999999999999999999999999999999999998754210 0 000 00
Q ss_pred --------------------------hhcccccc-----------------CCCCCCCCcC-------------ccCCC-
Q 011989 262 --------------------------SRALTTKY-----------------NGTPQEASRP-------------FDCGR- 284 (473)
Q Consensus 262 --------------------------~~~~~~~~-----------------~~~~~~~~~p-------------fd~~~- 284 (473)
.+.+.... ...+++.+|| ||.++
T Consensus 184 ~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~ 263 (418)
T 2iik_A 184 ERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGS 263 (418)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCC
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCc
Confidence 00110000 0112567888 98765
Q ss_pred ----CceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEE
Q 011989 285 ----DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNA 360 (473)
Q Consensus 285 ----~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~ 360 (473)
+++.++|||++|||++++.|+++|.+|+++|.|++.+.. .|+..+.+...+++++|+++|++++||||||+
T Consensus 264 ~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~ 338 (418)
T 2iik_A 264 TTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIFEI 338 (418)
T ss_dssp CCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred eeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCeeee
Confidence 999999999999999999999999999999999988763 44445567788999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhhcccCCCCceeecccc--chhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCCC
Q 011989 361 HATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 438 (473)
Q Consensus 361 hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~--~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~ 438 (473)
|++ +..+|..|.+++ +.. +.+++..++ ++||++||+|+.++++++++|+++-
T Consensus 339 h~a-f~~~~~~~~~~l----g~~----~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~----------------- 392 (418)
T 2iik_A 339 NEA-FASQAAYCVEKL----RLP----PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRG----------------- 392 (418)
T ss_dssp CCS-BHHHHHHHHHHH----TCC----GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHT-----------------
T ss_pred ecc-chHHHHHHHHHc----CCC----ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcC-----------------
Confidence 974 445666666554 221 357888885 7999999999999999999998621
Q ss_pred CCccccCCCCCCc-EEEEeccccccceeeEEEeecC
Q 011989 439 FMPLTASKDMPIS-AALSNSFGFGGTNASLLFTKCQ 473 (473)
Q Consensus 439 ~~~~~~~~~~~~~-~~l~~s~g~gG~~~~~vl~~~~ 473 (473)
.+ +.+++..+.||...++||++++
T Consensus 393 -----------~~~~gl~~~c~ggG~g~a~~~e~~~ 417 (418)
T 2iik_A 393 -----------KRAYGVVSMCIGTGMGAAAVFEYPG 417 (418)
T ss_dssp -----------SCEEEEEEEEETTTEEEEEEEEEC-
T ss_pred -----------CCeeeEEEEeeccchhheEEEeccC
Confidence 23 7888888889999999999863
No 32
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=1.1e-32 Score=277.50 Aligned_cols=270 Identities=18% Similarity=0.207 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHHHHcC----CCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHH
Q 011989 129 FIAYALCAADEALHDAK----WLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 204 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAg----l~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 204 (473)
..+|+++|+++||+||| +++++++ +|++|+..++ ...+.++.+++
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id-----~v~~g~~~~~--------------------------~~~~~~a~~va 83 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIE-----EVACGNVLNV--------------------------GAGATEHRAAC 83 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCC-----CEEEECSSSB--------------------------GGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCC-----EEEEEecCCC--------------------------CCCChHHHHHH
Confidence 46799999999999999 9888776 7999986532 12356788999
Q ss_pred HhcCC--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH------------HH--HH-----hhhh
Q 011989 205 MKYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS------------MA--GF-----CKSR 263 (473)
Q Consensus 205 ~~lgl--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~------------~~--~~-----~~~~ 263 (473)
..+|+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++.... +. .+ ..++
T Consensus 84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (393)
T 1afw_A 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMG 163 (393)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHH
T ss_pred HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHH
Confidence 99999 7899999999999999999999999999999999999997543111 00 00 0011
Q ss_pred cccc----ccC----------------------------------------CCCCC------------CCcC-ccCCCCc
Q 011989 264 ALTT----KYN----------------------------------------GTPQE------------ASRP-FDCGRDG 286 (473)
Q Consensus 264 ~~~~----~~~----------------------------------------~~~~~------------~~~p-fd~~~~G 286 (473)
.+++ +++ ..+++ .++| ||.++ |
T Consensus 164 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~-G 242 (393)
T 1afw_A 164 ITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR-G 242 (393)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----C
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-C
Confidence 1100 000 01122 2456 87544 7
Q ss_pred ee-------eccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 011989 287 FV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVN 359 (473)
Q Consensus 287 ~~-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~ 359 (473)
++ ++||+++|||++++.|+++|.+++++|.|++.+++ .|+....+...+++++|+++|++++||||||
T Consensus 243 ~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~ve 317 (393)
T 1afw_A 243 TTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGV-----PPEIMGVGPAYAIPKVLEATGLQVQDIDIFE 317 (393)
T ss_dssp CCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEecc-----ChhhcchhHHHHHHHHHHHcCCCHHHCCEEE
Confidence 76 89999999999999999999999999999999886 2444456778999999999999999999999
Q ss_pred EcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCCCC
Q 011989 360 AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNF 439 (473)
Q Consensus 360 ~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 439 (473)
+|+++|. .|..+++. |+... .+++++..+..+||++||+|+.++++++++|+++-
T Consensus 318 ~h~~ft~----~~l~~~~~-lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~------------------ 372 (393)
T 1afw_A 318 INEAFAA----QALYCIHK-LGIDL--NKVNPRGGAIALGHPLGCTGARQVATILRELKKDQ------------------ 372 (393)
T ss_dssp ECCSBHH----HHHHHHHH-HTCCG--GGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTC------------------
T ss_pred EeccCHH----HHHHHHHH-hCCCC--cCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcC------------------
Confidence 9988885 36666644 45321 23444455558999999999999999999998631
Q ss_pred CccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 440 MPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 440 ~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
. .++...+-||...++||+++
T Consensus 373 --------~----gl~~~c~ggg~g~a~~~~~~ 393 (393)
T 1afw_A 373 --------I----GVVSMCIGTGMGAAAIFIKE 393 (393)
T ss_dssp --------E----EEEEEEETTTEEEEEEEEEC
T ss_pred --------C----cEEEEeecccceEEEEEEeC
Confidence 1 45555566788889999874
No 33
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=2.1e-32 Score=276.26 Aligned_cols=268 Identities=20% Similarity=0.271 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
..+|+++++++||+|||+++++++ .+++|+..+.. ..+.++.+++..||
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id-----~~~~g~~~~~~--------------------------~~~~~a~~va~~lg 80 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVK-----EAYMGNVLQGG--------------------------EGQAPTRQAVLGAG 80 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CCchHHHHHHHHcC
Confidence 467999999999999999887776 78888754321 11346778999999
Q ss_pred C--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-------------------HHH---------
Q 011989 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-------------------MAG--------- 258 (473)
Q Consensus 209 l--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~-------------------~~~--------- 258 (473)
+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++.... +..
T Consensus 81 l~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T 2ib8_A 81 LPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIH 160 (395)
T ss_dssp CCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEE
T ss_pred CCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccch
Confidence 9 7999999999999999999999999999999999999997543211 000
Q ss_pred --------Hhhhhcccc--------------------ccCC-----------------CCCCCCcC--ccC---------
Q 011989 259 --------FCKSRALTT--------------------KYNG-----------------TPQEASRP--FDC--------- 282 (473)
Q Consensus 259 --------~~~~~~~~~--------------------~~~~-----------------~~~~~~~p--fd~--------- 282 (473)
....+.-.. .+.. ..++.+++ |+.
T Consensus 161 m~~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~ 240 (395)
T 2ib8_A 161 MGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQ 240 (395)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCcccc
Confidence 011100000 0000 01122222 554
Q ss_pred CCCcee-------eccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011989 283 GRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 355 (473)
Q Consensus 283 ~~~G~~-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 355 (473)
+++|++ ++||+++|||++++.|+++|.+++++|.|++.+. +.|...+.+...+++++|+++|++++||
T Consensus 241 ~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~dI 315 (395)
T 2ib8_A 241 KENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKKEDI 315 (395)
T ss_dssp SSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGGGE
T ss_pred CCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCHHHc
Confidence 558999 9999999999999999999999999999999865 2444445677899999999999999999
Q ss_pred cEEEEcCCCCCCCCHHHHHHHHHH--hhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCC
Q 011989 356 DYVNAHATSTPLGDTVEATAIRTV--FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 433 (473)
Q Consensus 356 d~v~~hgtgt~~~D~~E~~a~~~~--~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 433 (473)
||||+| |..|..++..+ |+... .++++++.|.++||+.||+|+.++++++++|+++
T Consensus 316 d~ie~~-------D~f~~~~l~~~e~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------- 373 (395)
T 2ib8_A 316 AMWEVN-------EAFSLVVLANIKMLEIDP--QKVNINGGAVSLGHPIGMSGARIVGHLTHALKQG------------- 373 (395)
T ss_dssp EEEEEC-------CSBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCTT-------------
T ss_pred CEEEEc-------cccHHHHHHHHHHcCCCc--cccCCCcchhhcCCChhHHHHHHHHHHHHHHhhC-------------
Confidence 999987 66688877777 66432 3678888899999999999999999999999741
Q ss_pred CCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 434 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
++.++....-||...++||++
T Consensus 374 -----------------~~gl~~~~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 374 -----------------EYGLASICNGGGGASAMLIQK 394 (395)
T ss_dssp -----------------CEEEEEEEETTTEEEEEEEEE
T ss_pred -----------------CceEEEEecccCHhheEEEEc
Confidence 234554555567778888886
No 34
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=6.4e-32 Score=272.39 Aligned_cols=272 Identities=22% Similarity=0.363 Sum_probs=213.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
..+|+++|+++||+|||+++++++ +|++|+..+.. .....+.+++..+|
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId-----~vi~g~~~~~~--------------------------~~~~~a~~v~~~lG 79 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMID-----ESLLGGVLTAG--------------------------LGQNIARQIALGAG 79 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCCC--------------------------CCchHHHHHHHHcC
Confidence 468999999999999999999888 89999854321 12345778999999
Q ss_pred C--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH-----------------------------
Q 011989 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA----------------------------- 257 (473)
Q Consensus 209 l--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~----------------------------- 257 (473)
+ ++|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++......
T Consensus 80 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (396)
T 4dd5_A 80 IPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNN 159 (396)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTT
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhccccccccc
Confidence 9 479999999999999999999999999999999999999876521100
Q ss_pred ----------------------HH---hhhhccc---c-ccC----------------CCCCCCCcC-------------
Q 011989 258 ----------------------GF---CKSRALT---T-KYN----------------GTPQEASRP------------- 279 (473)
Q Consensus 258 ----------------------~~---~~~~~~~---~-~~~----------------~~~~~~~~p------------- 279 (473)
.+ +..+... . .+. ..++..+|+
T Consensus 160 ~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v 239 (396)
T 4dd5_A 160 YHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPA 239 (396)
T ss_dssp EEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCc
Confidence 00 0000000 0 000 012222222
Q ss_pred ccC-----CCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011989 280 FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 354 (473)
Q Consensus 280 fd~-----~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 354 (473)
|+. ..+...++||++++||++++.|++++.+++++|.|++.+++ .|++.+.++..+++++|+++|++++|
T Consensus 240 ~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~d 314 (396)
T 4dd5_A 240 FKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV-----DPKIMGYGPVPATKKALEAANMTIED 314 (396)
T ss_dssp SSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC-----CCCcccHHHHHHHHHHHHHcCCCHHH
Confidence 331 24566789999999999999999999999999999998874 45555566789999999999999999
Q ss_pred ccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCC
Q 011989 355 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 434 (473)
Q Consensus 355 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 434 (473)
|||||+|.+. .+|..++.+.|+... .++++++.|.++||+++|+|+.++++++++|+++
T Consensus 315 Id~ve~~d~f-----~~~~~~~~~~lg~~~--~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~-------------- 373 (396)
T 4dd5_A 315 IDLVEANEAF-----AAQSVAVIRDLNIDM--NKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR-------------- 373 (396)
T ss_dssp CSEEEECCSB-----HHHHHHHHHHHTCCT--TSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------
T ss_pred cCEEEecChH-----HHHHHHHHHHhCCCC--CccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9999999543 357778888887543 4688999999999999999999999999999973
Q ss_pred CCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 435 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
+.+++|++..+.||...++|||+
T Consensus 374 --------------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 --------------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp --------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCeEEEEEcccCCceeEEEEeC
Confidence 25789999999999999999985
No 35
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=99.98 E-value=9.5e-32 Score=271.07 Aligned_cols=273 Identities=21% Similarity=0.294 Sum_probs=213.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
..+|+++|+++||+|||+++++++ +|++|+..... .....+.+++..+|
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id-----~v~~g~~~~~~--------------------------~~~~~a~~i~~~lG 77 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD-----EVILGHCIQRT--------------------------DEANTARTAALAAG 77 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSSCCG--------------------------GGCSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC-----EEEEEEccCCC--------------------------ccchHHHHHHHHcC
Confidence 467999999999999999999888 89999854321 12345678999999
Q ss_pred C--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH------------------------------
Q 011989 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM------------------------------ 256 (473)
Q Consensus 209 l--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~------------------------------ 256 (473)
+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++.....
T Consensus 78 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (394)
T 3ss6_A 78 FPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHI 157 (394)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCC
T ss_pred CCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccc
Confidence 9 47999999999999999999999999999999999999986642210
Q ss_pred -HH----------------------Hhhhh--------ccccc------------cCCCCCCCCcC-------------c
Q 011989 257 -AG----------------------FCKSR--------ALTTK------------YNGTPQEASRP-------------F 280 (473)
Q Consensus 257 -~~----------------------~~~~~--------~~~~~------------~~~~~~~~~~p-------------f 280 (473)
.. .+..+ .+.+. ....++..+|+ |
T Consensus 158 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf 237 (394)
T 3ss6_A 158 MMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAF 237 (394)
T ss_dssp BHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCcc
Confidence 00 00000 00000 00123344443 5
Q ss_pred cC-----CCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011989 281 DC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 355 (473)
Q Consensus 281 d~-----~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 355 (473)
+. ..++..++||++++||++++.|++++.+++++|.|++.++. .|.....+...+++++|+++|++++||
T Consensus 238 ~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~dI 312 (394)
T 3ss6_A 238 RKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLEDA 312 (394)
T ss_dssp STTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGC
T ss_pred CCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHHc
Confidence 42 25667789999999999999999999999999999999763 455555567899999999999999999
Q ss_pred cEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCC
Q 011989 356 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 435 (473)
Q Consensus 356 d~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 435 (473)
||||+|.. ..+|..++.+.|+... .++++++.|.++||+.+|+|+..+++++++|+++
T Consensus 313 d~ve~~d~-----fa~~~~~~~~~lg~~~--~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--------------- 370 (394)
T 3ss6_A 313 DLLEINEA-----FAAQYLAVEKELDLDR--EKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR--------------- 370 (394)
T ss_dssp SEEEECCS-----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred CEEEeCCc-----hHHHHHHHHHHhCCCC--CCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc---------------
Confidence 99999943 2368888888887543 3678888999999999999999999999999872
Q ss_pred CCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 436 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
+.++.|++..+.||...++||++.
T Consensus 371 -------------~~~~gl~~~c~ggG~g~a~~~e~~ 394 (394)
T 3ss6_A 371 -------------GLEKGIASLCVGGGIGVALFIEAL 394 (394)
T ss_dssp -------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred -------------CCCEEEEEEccCcCceeEEEEEcC
Confidence 246888888889999999999874
No 36
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=99.97 E-value=1.5e-31 Score=268.74 Aligned_cols=277 Identities=20% Similarity=0.240 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHHHHHc-CCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 128 RFIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 128 ~~~~la~~aa~~Al~dA-gl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
+..+|+++|+++||+|| |+++++++ +|++|+..+... ....++.+++..
T Consensus 26 ~~~~L~~~a~~~Al~~a~gi~~~~Id-----~v~~g~~~~~~~-------------------------~~~~~a~~~~~~ 75 (387)
T 3goa_A 26 RAEDLSAHLMRSLLARNPSLTAATLD-----DIYWGCVQQTLE-------------------------QGFNIARNAALL 75 (387)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCGGGCC-----EEEEECSCCSBT-------------------------TTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcC-----EEEEEcccCCcc-------------------------cccHHHHHHHHH
Confidence 45789999999999999 99999888 899998543210 013456789999
Q ss_pred cCC--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH----------------------------
Q 011989 207 YGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---------------------------- 256 (473)
Q Consensus 207 lgl--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~---------------------------- 256 (473)
+|+ +.|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++.....
T Consensus 76 ~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 155 (387)
T 3goa_A 76 AEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLS 155 (387)
T ss_dssp TTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHH
T ss_pred cCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHH
Confidence 999 57999999999999999999999999999999999999987643210
Q ss_pred ----------HHHh---hhh--------cccccc-------------CCCCCCCCcC-------------ccC------C
Q 011989 257 ----------AGFC---KSR--------ALTTKY-------------NGTPQEASRP-------------FDC------G 283 (473)
Q Consensus 257 ----------~~~~---~~~--------~~~~~~-------------~~~~~~~~~p-------------fd~------~ 283 (473)
..+. ..+ .+.... ...+++.+|| |+. .
T Consensus 156 ~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~ 235 (387)
T 3goa_A 156 RLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTA 235 (387)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceec
Confidence 0000 000 000000 0012233332 543 2
Q ss_pred CCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEEcCC
Q 011989 284 RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 363 (473)
Q Consensus 284 ~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgt 363 (473)
.++..++||++++||++++.|+++|.+++++|.|++.+.++ |+....+...+++++|+++|++|+||||||+|.+
T Consensus 236 ~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~ 310 (387)
T 3goa_A 236 GTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCD-----PSIMGYGPVPASKLALKKAGLSASDIDVFEMNEA 310 (387)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC-----TTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred ccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCC-----CCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCc
Confidence 45667899999999999999999999999999999998874 3333345689999999999999999999999976
Q ss_pred CCCCCCHHHHHHHHHHhhccc-CCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCCCCCcc
Q 011989 364 STPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPL 442 (473)
Q Consensus 364 gt~~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 442 (473)
.+.. +...+ +.++.-. ...+++++..+..+||++||+|+.++++++++|+++
T Consensus 311 f~~~----~~~~~-~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------- 363 (387)
T 3goa_A 311 FAAQ----ILPCI-KDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK---------------------- 363 (387)
T ss_dssp BHHH----HHHHH-HHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------
T ss_pred chHH----HHHHH-HHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc----------------------
Confidence 6542 33333 3333200 001344555566899999999999999999999962
Q ss_pred ccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 443 TASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 443 ~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
+.++.+++..+-||...++||++.
T Consensus 364 ------~~~~gl~~~c~ggG~g~a~~~e~~ 387 (387)
T 3goa_A 364 ------DAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred ------CCCEEEEEeccCcCceEEEEEEeC
Confidence 246888877788899999999863
No 37
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=99.97 E-value=6.2e-31 Score=265.35 Aligned_cols=272 Identities=24% Similarity=0.375 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
..+|+++|+++||+|||+++++++ +|++|+..... ....++.+++..+|
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id-----~v~~g~~~~~~--------------------------~~~~~a~~~~~~lG 77 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID-----EVIIGNVLQTG--------------------------LGQNVARQIAINAG 77 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECCCCSS--------------------------TTCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CcchHHHHHHHHcC
Confidence 467999999999999999999888 89999754221 11245678999999
Q ss_pred C--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH-----------------------------
Q 011989 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA----------------------------- 257 (473)
Q Consensus 209 l--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~----------------------------- 257 (473)
+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++......
T Consensus 78 l~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (395)
T 4e1l_A 78 IPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQ 157 (395)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTH
T ss_pred CCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhccccccccccc
Confidence 9 579999999999999999999999999999999999999877633210
Q ss_pred ---HHh----------------------hhhccc---c-cc-----------------CCCCCCCCcC------------
Q 011989 258 ---GFC----------------------KSRALT---T-KY-----------------NGTPQEASRP------------ 279 (473)
Q Consensus 258 ---~~~----------------------~~~~~~---~-~~-----------------~~~~~~~~~p------------ 279 (473)
... ..+... . .+ ...++..+|+
T Consensus 158 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~ 237 (395)
T 4e1l_A 158 YHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKP 237 (395)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCB
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCC
Confidence 000 000000 0 00 0012233332
Q ss_pred -ccC-----CCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011989 280 -FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 353 (473)
Q Consensus 280 -fd~-----~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 353 (473)
|+. ..+...++||++++||++++.|++++.+++++|.|++.+++ .|+..+.++..+++++|+++|++++
T Consensus 238 v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~al~~agl~~~ 312 (395)
T 4e1l_A 238 AFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGV-----EPEVMGTGPIPATRKALKKAGLSIN 312 (395)
T ss_dssp SSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGTTCTHHHHHHHHHHHTTCCGG
T ss_pred ccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccC-----CCCcchHHHHHHHHHHHHHcCCCHH
Confidence 331 24566789999999999999999999999999999999874 3444444568999999999999999
Q ss_pred CccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCC
Q 011989 354 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 433 (473)
Q Consensus 354 dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 433 (473)
||||||+|.. ...|..++.+.|+... .++++++.|.++||+.||+|+..+++++++|+++
T Consensus 313 dId~ve~~d~-----fa~~~~~~~~~lg~~~--~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~------------- 372 (395)
T 4e1l_A 313 DIDLIEANEA-----FAAQALAVKNELQIDS--SKLNVNGGAIALGHPIGASGARILVTLIYEMQKR------------- 372 (395)
T ss_dssp GCSEEEECCS-----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH-------------
T ss_pred HcCEEEecCh-----hHHHHHHHHHHhCCCC--CCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc-------------
Confidence 9999999833 2267778888887543 3678899999999999999999999999999973
Q ss_pred CCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 434 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
..++.+++..+.||...++||++
T Consensus 373 ---------------~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 373 ---------------KVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp ---------------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred ---------------CCCEEEEEEccCCCceEEEEEeC
Confidence 24688888889999999999985
No 38
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.97 E-value=6.1e-32 Score=265.81 Aligned_cols=249 Identities=17% Similarity=0.167 Sum_probs=186.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
++..+|+++|+++||+|||+++++++ +|+++++... ...+..+.+++..
T Consensus 48 ~~~~~la~~a~~~al~~ag~~~~~id-----~vi~~~~~~~--------------------------~~~~~~a~~v~~~ 96 (322)
T 1ub7_A 48 EYTSDLAFKAVEDLLRRHPGALEGVD-----AVIVATNTPD--------------------------ALFPDTAALVQAR 96 (322)
T ss_dssp CCHHHHHHHHHHHHHHHSTTTTTTEE-----EEEEECSSCS--------------------------EEESCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCCcHHHHHHHH
Confidence 45789999999999999999877665 7888875421 1112357899999
Q ss_pred cCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCCc
Q 011989 207 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (473)
Q Consensus 207 lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~G 286 (473)
||+++|+++++++|+|++.||..|+++|++|++|++||+|+|.+. +. ..|+| ++++
T Consensus 97 lgl~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------------------~~~~d-~~~~ 152 (322)
T 1ub7_A 97 FGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALS-KI----------------------IDWND-RATA 152 (322)
T ss_dssp TTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GT----------------------SCTTC-HHHH
T ss_pred hCCCCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhc-cc----------------------cChhh-cccc
Confidence 999999999999999999999999999999999999999999742 21 01343 4568
Q ss_pred eeeccceEEEEEccchHHHhcCCeEEEEE-EEEEEecCCCCCCC-----CCC---------Ch--------HHHHHHHHH
Q 011989 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEV-RGYGMSGDAHHITQ-----PHI---------DG--------KGAILAMTR 343 (473)
Q Consensus 287 ~~~geGaaavvL~~~~~A~~~g~~~~a~i-~g~~~~~d~~~~~~-----~~~---------~~--------~~~~~a~~~ 343 (473)
+++||||+|+||++.+. +..+++.+ .+.+...+..+.+. |+. .+ ..+.+++++
T Consensus 153 ~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 228 (322)
T 1ub7_A 153 VLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLE 228 (322)
T ss_dssp TTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHH
Confidence 99999999999998653 23455443 22221112111110 221 22 467889999
Q ss_pred HHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccC
Q 011989 344 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 423 (473)
Q Consensus 344 al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ip 423 (473)
+|+++|++++|||||++|+++++..|. +.+.|+... . .+.+.|..+||+.+|++++.+.++ ++++.+.
T Consensus 229 al~~agl~~~did~~~~H~~~~~~~d~-----~~~~lg~~~--~--~~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~ 296 (322)
T 1ub7_A 229 AIEKAGLTPEDIRLFVPHQANLRIIDA-----ARERLGLPW--E--RVAVNVDRYGNTSTASIPLALKEA---VDAGRIR 296 (322)
T ss_dssp HHHHHTCCGGGCSEEEECCSCHHHHHH-----HHHTTTCCG--G--GBCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC
T ss_pred HHHHcCCCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCH--H--HHHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC
Confidence 999999999999999999999987663 566666432 1 234678999999999999977654 4555431
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 424 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 424 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
+.+.+++++||+|++++++||+.
T Consensus 297 -------------------------~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 297 -------------------------EGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp -------------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred -------------------------CCCEEEEEEEChhheeEEEEEEe
Confidence 24689999999999999999975
No 39
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=99.97 E-value=2.7e-30 Score=260.80 Aligned_cols=274 Identities=19% Similarity=0.198 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhc
Q 011989 129 FIAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (473)
Q Consensus 129 ~~~la~~aa~~Al~d-Agl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 207 (473)
..+|+.+|+++||+| ||+++++++ +|++|+..... .....++.+++..+
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId-----~vi~g~~~~~~-------------------------~~~~~~a~~va~~l 81 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLIS-----DMILGVVSPVG-------------------------DQGGDIARTAVLAA 81 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEE-----EEEEECC---------------------------------CHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCC-----EEEEEecCccc-------------------------cccCcHHHHHHHHc
Confidence 468999999999999 999988887 89998753210 01134567899999
Q ss_pred CC--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH--------------------HHHh-----
Q 011989 208 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------------------AGFC----- 260 (473)
Q Consensus 208 gl--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~--------------------~~~~----- 260 (473)
|+ ++|+++|+++|+|++.||..|+++|++|++|+|||+|+|.++..... ....
T Consensus 82 Glp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a 161 (407)
T 3svk_A 82 GLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIA 161 (407)
T ss_dssp TCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHH
T ss_pred CCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHH
Confidence 99 57999999999999999999999999999999999999987652110 0000
Q ss_pred -----------------hhhc---ccc-ccC--------------CCCCCCCcC-------------ccC----------
Q 011989 261 -----------------KSRA---LTT-KYN--------------GTPQEASRP-------------FDC---------- 282 (473)
Q Consensus 261 -----------------~~~~---~~~-~~~--------------~~~~~~~~p-------------fd~---------- 282 (473)
...+ ... .+. ..++..+|+ |+.
T Consensus 162 ~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~ 241 (407)
T 3svk_A 162 TLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDV 241 (407)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-----------
T ss_pred HHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCcccccccc
Confidence 0000 000 000 112333332 432
Q ss_pred ----------------CCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHH
Q 011989 283 ----------------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 346 (473)
Q Consensus 283 ----------------~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~ 346 (473)
..+...++||++++||++++.|+++|.+++++|.|++.+.+. |.....+...+++++|+
T Consensus 242 ~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~ 316 (407)
T 3svk_A 242 ALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSD-----PVIMLTGPTPATRKVLD 316 (407)
T ss_dssp --CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHHHH
T ss_pred ccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccC-----CccccHHHHHHHHHHHH
Confidence 135556999999999999999999999999999999997753 22223345789999999
Q ss_pred HcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCC
Q 011989 347 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTL 426 (473)
Q Consensus 347 ~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~ 426 (473)
++|++++||||+|+|.+.+.. |...+ +.++... .+++++..+..+||++||+|+.++++++++|+++
T Consensus 317 ~Agl~~~dId~~e~hdaf~~~----~l~~~-~~lg~~~--~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~------ 383 (407)
T 3svk_A 317 RAGLTIDDIDLFELNEAFASV----VLKFQ-KDLNIPD--EKLNVNGGAIAMGHPLGATGAMITGTMVDELERR------ 383 (407)
T ss_dssp HHTCCGGGCSEEEECCSBHHH----HHHHH-HHHTCCG--GGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH------
T ss_pred HcCCCHHHCCEEEEeChhHHH----HHHHH-HHhCCCC--CCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc------
Confidence 999999999999999655543 33333 3344322 2455666666899999999999999999999862
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 427 NLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
+.+++|++..+.||...++|||+.
T Consensus 384 ----------------------~~~~gl~~~c~ggG~g~a~~~e~~ 407 (407)
T 3svk_A 384 ----------------------NARRALITLCIGGGMGVATIIERV 407 (407)
T ss_dssp ----------------------TCCEEEEEEECSSSCEEEEEEEEC
T ss_pred ----------------------CCCEEEEEeeccCcceEEEEEEcC
Confidence 257889999999999999999973
No 40
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.96 E-value=2.4e-30 Score=252.89 Aligned_cols=244 Identities=17% Similarity=0.195 Sum_probs=185.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
++..+|+++|+++||+|||+++++++ +|++++..+.. ..+..+.+++..
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id-----~v~~~~~~~~~--------------------------~~~~~a~~v~~~ 96 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELD-----LIILATLTPQK--------------------------RFPSTACLVQAQ 96 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSCSS--------------------------SSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCCcHHHHHHHH
Confidence 56789999999999999999888776 89999865321 112367899999
Q ss_pred cCCCC-CeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCC
Q 011989 207 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (473)
Q Consensus 207 lgl~G-p~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~ 285 (473)
||+++ |+++++++|+|++.||..|+++|++|++|.+||+|+|.+... + . |+.+.+
T Consensus 97 lgl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~------------~-~~~~~~ 152 (309)
T 2ebd_A 97 LKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEA-----------V------------D-WEDRST 152 (309)
T ss_dssp HTCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGT-----------C------------C-TTCTTT
T ss_pred hCCCCceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEecccccc-----------c------------C-ccchhh
Confidence 99998 999999999999999999999999999999999999974321 0 1 233567
Q ss_pred ceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCC---CCCCC-----CCChH--------HHHHHHHHHHHHcC
Q 011989 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQP-----HIDGK--------GAILAMTRALKQSG 349 (473)
Q Consensus 286 G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~---~~~~~-----~~~~~--------~~~~a~~~al~~ag 349 (473)
++++||||+|+||++.+.+ ..+++ ....+++. ++..| ...+. .+.++++++|+++|
T Consensus 153 ~~~~gdGaaA~vL~~~~~~----~~i~~----~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ag 224 (309)
T 2ebd_A 153 CVLFGDGAGAVVVTRSEDK----SDILA----TRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAG 224 (309)
T ss_dssp TTTBCEEEEEEEEEECSSS----CEEEE----EEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccEEEEEEecCCC----CceeE----EEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999987643 22433 33444442 22223 22333 56789999999999
Q ss_pred CCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCC
Q 011989 350 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 429 (473)
Q Consensus 350 l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~ 429 (473)
++++|||||++|+++++..| ++.+.|+... .++ .+.|..+||+.+|++++.|.+++. ++.+
T Consensus 225 l~~~did~~~~H~~~~~~~~-----~~~~~lg~~~--~~~--~~~~~~~Gh~~~As~~~~L~~~~~---~g~~------- 285 (309)
T 2ebd_A 225 VKPEEVSLVIPHQANVRIIN-----ALAEKLNIPK--EKV--FVNIQKYGNTSAASIPIALHEAIK---EGKV------- 285 (309)
T ss_dssp CCGGGCSEEEECCSCHHHHH-----HHHHHTTCCG--GGB--CCCHHHHCBCGGGHHHHHHHHHHH---TTCC-------
T ss_pred CCHHHCCEEEEcCCCHHHHH-----HHHHHhCCCH--HHh--hhhHhhhcchHHHHHHHHHHHHHH---cCCC-------
Confidence 99999999999999998754 4566676532 123 356889999999999998877643 3321
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEe
Q 011989 430 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 470 (473)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~ 470 (473)
.+.+.++..+||.|.+..+++|+
T Consensus 286 ------------------~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 286 ------------------KRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ------------------CCCCEEEEEEEchhhhhEEEEEE
Confidence 12357788899999999999986
No 41
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.96 E-value=4.5e-30 Score=251.87 Aligned_cols=248 Identities=17% Similarity=0.166 Sum_probs=184.2
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHH
Q 011989 126 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 205 (473)
Q Consensus 126 ~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 205 (473)
.++..+|+++|+++||+|||+++++++ +|++|+..+. ...+..+.+++.
T Consensus 48 ~~~~~~l~~~a~~~al~~ag~~~~~id-----~vi~g~~~~~--------------------------~~~~~~a~~v~~ 96 (317)
T 1hnj_A 48 NETVSTMGFEAATRAIEMAGIEKDQIG-----LIVVATTSAT--------------------------HAFPSAACQIQS 96 (317)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCS--------------------------CSSSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCCcHHHHHHH
Confidence 346789999999999999999887776 8888885421 112346789999
Q ss_pred hcCCC-CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCC
Q 011989 206 KYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (473)
Q Consensus 206 ~lgl~-Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~ 284 (473)
.||++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.++... . |+.+.
T Consensus 97 ~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~-----------------------~-~~d~~ 152 (317)
T 1hnj_A 97 MLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTC-----------------------D-PTDRG 152 (317)
T ss_dssp HHTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHS-----------------------C-TTCHH
T ss_pred HhCCCCCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC-----------------------C-chhcc
Confidence 99998 89999999999999999999999999999999999999732110 0 22233
Q ss_pred CceeeccceEEEEEccchHHHhcCCeEEEEEEEE-EEecCCCCCCCC-----------CCChH--------HHHHHHHHH
Q 011989 285 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGY-GMSGDAHHITQP-----------HIDGK--------GAILAMTRA 344 (473)
Q Consensus 285 ~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~-~~~~d~~~~~~~-----------~~~~~--------~~~~a~~~a 344 (473)
+|+++||||+|+||++.+. ..+++.+.+. +...+..+.+.+ ...+. .+.++++++
T Consensus 153 ~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~a 227 (317)
T 1hnj_A 153 TIIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDET 227 (317)
T ss_dssp HHTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHH
Confidence 4899999999999997653 2466665442 111122222211 12233 567899999
Q ss_pred HHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCC
Q 011989 345 LKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 424 (473)
Q Consensus 345 l~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp 424 (473)
|+++|++++|||||++|++|++..| ++.+.|+... -.+.++|..+||+.+|+..+.|..+ ++.+.+.
T Consensus 228 L~~agl~~~did~v~~H~~~~~~~d-----~i~~~lg~~~----~~~~~~~~~~Gn~~~As~~~~L~~~---~~~~~~~- 294 (317)
T 1hnj_A 228 LAANNLDRSQLDWLVPHQANLRIIS-----ATAKKLGMSM----DNVVVTLDRHGNTSAASVPCALDEA---VRDGRIK- 294 (317)
T ss_dssp HHHTTCCGGGCCEEEECCSCHHHHH-----HHHHHTTCCG----GGBCCCHHHHCBCGGGHHHHHHHHH---HHTTCSC-
T ss_pred HHHcCCCHHHCCEEEEcCCCHHHHH-----HHHHHcCCCH----HHhHhhHhhhCcHHHHHHHHHHHHH---HHhCCCC-
Confidence 9999999999999999999999866 4566676532 1345788999999999999877655 3433321
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEe
Q 011989 425 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 470 (473)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~ 470 (473)
+-+.++..+||.|.+..+++|+
T Consensus 295 ------------------------~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 295 ------------------------PGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp ------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ------------------------CCCEEEEEEEchhheeEEEEEE
Confidence 1346777899999998888886
No 42
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.96 E-value=1.6e-29 Score=250.28 Aligned_cols=248 Identities=19% Similarity=0.168 Sum_probs=180.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
++..+|+++|+++||+|||+++++++ +|++|++.+.. ..+..+.+++..
T Consensus 58 ~~~~~la~~Aa~~al~~ag~~~~~id-----~vi~gt~~~~~--------------------------~~p~~a~~v~~~ 106 (339)
T 1mzj_A 58 ETIQVMGVAASRRALEHAGVDPAEID-----LVVVSTMTNFV--------------------------HTPPLSVAIAHE 106 (339)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCCC--------------------------CSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------CCChHHHHHHHH
Confidence 45789999999999999999887776 89999865321 012257799999
Q ss_pred cCCC-CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCC
Q 011989 207 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (473)
Q Consensus 207 lgl~-Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~ 285 (473)
||++ +|+++++++|+|++.||..|+++|++|++|.|||+|+|.++ +.. . ++.+.+
T Consensus 107 lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s-~~~----------------------~-~~d~~~ 162 (339)
T 1mzj_A 107 LGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-DVI----------------------D-LADRSL 162 (339)
T ss_dssp HTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-GGS----------------------C-SSCTTT
T ss_pred hCCCCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-ccc----------------------C-cccccc
Confidence 9998 69999999999999999999999999999999999999743 210 0 122467
Q ss_pred ceeeccceEEEEEccchHHHhcCCeEEEEE-EEEEEecCCCCCC--CCC-------------CCh--------HHHHHHH
Q 011989 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEV-RGYGMSGDAHHIT--QPH-------------IDG--------KGAILAM 341 (473)
Q Consensus 286 G~~~geGaaavvL~~~~~A~~~g~~~~a~i-~g~~~~~d~~~~~--~~~-------------~~~--------~~~~~a~ 341 (473)
++++||||+|+||++.+. ..+++.. .+.+...+..+.+ .|+ ..+ ..+.+++
T Consensus 163 ~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i 237 (339)
T 1mzj_A 163 SFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAA 237 (339)
T ss_dssp TTTBCEEEEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHH
T ss_pred ceEeccCceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHH
Confidence 999999999999997642 2333321 1211111111111 011 012 4577899
Q ss_pred HHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCC-CceeeccccchhhhHHhHHHHHHHHHHHHHHhC
Q 011989 342 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHG 420 (473)
Q Consensus 342 ~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~ 420 (473)
+++|+++|++++|||||++|++|++.+|. +.+.++... . +++ .....+||+.+|+..+.|.+++ +.+
T Consensus 238 ~~aL~~agl~~~did~v~~H~~~~~~~d~-----i~~~lg~~~--~~~~~--~~~~~~Gn~~sAs~~~~L~~~~---~~g 305 (339)
T 1mzj_A 238 REALEVAGLTVGDLVAFVPHQANLRIIDV-----LVDRLGVPE--HVVVS--RDAEDTGNTSSASVALALDRLV---RSG 305 (339)
T ss_dssp HHHHHTTTCCGGGCSEEEECCSCHHHHHH-----HHHHHTCCT--TSEEC--CTHHHHCBCTTHHHHHHHHHHH---HHT
T ss_pred HHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHhCCCc--cceee--ehhhhcCchHHHHHHHHHHHHH---HcC
Confidence 99999999999999999999999998775 455566432 1 232 3346899999999998776553 443
Q ss_pred ccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 421 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 421 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
.+ .+.+.++..+||.|.+..+++|+-
T Consensus 306 ~~-------------------------~~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 306 AV-------------------------PGGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp SS-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CC-------------------------CCCCEEEEEEEchhheeEEEEEEe
Confidence 32 123578888999999999999863
No 43
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.95 E-value=3.7e-29 Score=244.98 Aligned_cols=244 Identities=18% Similarity=0.234 Sum_probs=182.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
.+..+|+++|+++||+|||+++++++ +|+++++.+.. . .+..+.+++..
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id-----~vi~~~~~~~~---------------------~-----~~~~a~~v~~~ 97 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPEDID-----MIIVATATGDM---------------------P-----FPTVANMLQER 97 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC---------------------S-----SSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------C-----CCcHHHHHHHH
Confidence 34689999999999999999887776 88998865321 1 11356799999
Q ss_pred cCCC-CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCC
Q 011989 207 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (473)
Q Consensus 207 lgl~-Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~ 285 (473)
+|++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.++.. .+|+|. .+
T Consensus 98 lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------------------~~~~d~-~~ 153 (313)
T 1zow_A 98 LGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI-----------------------TDLTDR-ST 153 (313)
T ss_dssp HTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT-----------------------CCTTCH-HH
T ss_pred hCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc-----------------------cCcccc-cc
Confidence 9998 5999999999999999999999999999999999999974321 123432 36
Q ss_pred ceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCC-----CCCCC----CCCh--------HHHHHHHHHHHHHc
Q 011989 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH-----HITQP----HIDG--------KGAILAMTRALKQS 348 (473)
Q Consensus 286 G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~-----~~~~~----~~~~--------~~~~~a~~~al~~a 348 (473)
++++|||++|+||++.+. +.+++ ++...+++. +...| ...+ ..+.++++++|+++
T Consensus 154 ~~~~gdGa~A~vl~~~~~----~~~i~----~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~a 225 (313)
T 1zow_A 154 AVLFGDGAGAVIIGEVSE----GRGII----SYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKA 225 (313)
T ss_dssp HTTBCEEEEEEEEEECST----TCEEE----EEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeeccceEEEEEEecCC----CCcee----EEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHc
Confidence 899999999999997653 23343 333333322 12111 1122 35678999999999
Q ss_pred CCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCC
Q 011989 349 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNL 428 (473)
Q Consensus 349 gl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~ 428 (473)
|++++|||||++|+++++..|.+ .+.|+... .+++ ..|..+||+.+|++++.|.+++ +++.+
T Consensus 226 gl~~~did~~~~H~~~~~~~d~~-----~~~lg~~~--~~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~------ 287 (313)
T 1zow_A 226 NLTSDDIDLFIPHQANIRIMESA-----RERLGISK--DKMS--VSVNKYGNTSAASIPLSIDQEL---KNGKL------ 287 (313)
T ss_dssp TCCGGGCSEEEECCSCHHHHHHH-----HHHHTCCG--GGBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCC------
T ss_pred CCCHHHCCEEEEcCCCHHHHHHH-----HHHhCCCH--HHHH--HhHhhhCchHHHHHHHHHHHHH---HcCCC------
Confidence 99999999999999999987764 45565432 1233 3589999999999999887653 33321
Q ss_pred CCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEe
Q 011989 429 AKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 470 (473)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~ 470 (473)
.+.+.+++.+||.|.+..++||+
T Consensus 288 -------------------~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 288 -------------------KDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp -------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -------------------CCCCEEEEEEEchhhhheEEEEE
Confidence 12457888999999999999986
No 44
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.94 E-value=1.6e-27 Score=235.05 Aligned_cols=245 Identities=17% Similarity=0.208 Sum_probs=179.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
++..+|+++|+++||+|||+ ++++ .|+++++.+.. ..+..+.+++..
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~ 97 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVD-----AVVLATSTGDF--------------------------CCPATAPRVAAR 97 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCS-----EEEEECSSCSE--------------------------EESCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCC-----EEEEEeCCCCC--------------------------CCChHHHHHHHH
Confidence 56789999999999999998 5665 78888754321 112356799999
Q ss_pred cCCC-CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCC
Q 011989 207 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (473)
Q Consensus 207 lgl~-Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~ 285 (473)
||++ +|+++++++|+|++.||..|+++|++|.+|.|||+|+|.++ +.. . ++.+.+
T Consensus 98 lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~~----------~-------------~~d~~~ 153 (331)
T 2x3e_A 98 LGLVGALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFS-HTL----------D-------------PADRST 153 (331)
T ss_dssp TTCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GGS----------C-------------TTCHHH
T ss_pred hCCCCCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccc-cCC----------C-------------cccccc
Confidence 9998 79999999999999999999999999999999999999743 210 0 112346
Q ss_pred ceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCC---CCCCCC----------------CCh--------HHHH
Q 011989 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQPH----------------IDG--------KGAI 338 (473)
Q Consensus 286 G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~---~~~~~~----------------~~~--------~~~~ 338 (473)
++++||||+|+||++.+.+ ++..+++ ....+++. .+..|. ..+ ..+.
T Consensus 154 ~~~~GdGA~A~vL~~~~~a--~~~~i~~----~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~ 227 (331)
T 2x3e_A 154 RALFGDGAGAVVLRAGDAE--EEGALLA----FDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMS 227 (331)
T ss_dssp HHHBCCEEEEEEEEEECTT--STTBEEE----EEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHH
T ss_pred ceeeccccEEEEEEecCCC--CCCceEE----EEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHH
Confidence 8899999999999987654 3334443 33334432 111111 112 4567
Q ss_pred HHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHH
Q 011989 339 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIH 418 (473)
Q Consensus 339 ~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~ 418 (473)
++++++|+++|++++|||||++|+++++..|. +.+.++... .+++. ....+||+.+|+..+.|..+ ++
T Consensus 228 ~~i~~aL~~agl~~~did~~~~H~~~~~~~d~-----~~~~lg~~~--~~~~~--~~~~~Gnt~sAs~~~~L~~~---~~ 295 (331)
T 2x3e_A 228 DSVRRVLDRVGWQASDLHHLVPHQANTRILAA-----VADQLDLPV--ERVVS--NIAEVGNTVAASIPLALAHG---LR 295 (331)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCCCHHHHHH-----HHHHHTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCH--HHHhh--hHhhhCcHHHHHHHHHHHHH---HH
Confidence 89999999999999999999999999998775 445565432 12332 35799999999988766544 34
Q ss_pred hCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 419 HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 419 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
.+.+ .+.+.++..+||.|.+..+++|+-
T Consensus 296 ~~~~-------------------------~~G~~vll~~~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 296 QGIL-------------------------RDGGNMVLTGFGAGLTWGSVALRW 323 (331)
T ss_dssp TTCS-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred hCCC-------------------------CCCCEEEEEEEeHHhhheeeEEEE
Confidence 3322 123578889999999999999864
No 45
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.94 E-value=1.2e-27 Score=236.50 Aligned_cols=248 Identities=21% Similarity=0.244 Sum_probs=177.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
++..+|+++|+++||+|||+++++++ +|++++..+.. ..+..+.+++..
T Consensus 59 ~~~~~la~~A~~~al~~ag~~~~~id-----~vi~~t~~~~~--------------------------~~~~~a~~v~~~ 107 (335)
T 1u6e_A 59 ESAASMATEACRRALSNAGLSAADID-----GVIVTTNTHFL--------------------------QTPPAAPMVAAS 107 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCCC--------------------------SSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCChHHHHHHHH
Confidence 45789999999999999999888776 89999865321 012467789999
Q ss_pred cCCC-CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCC
Q 011989 207 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (473)
Q Consensus 207 lgl~-Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~ 285 (473)
||++ +|+++++++|+|++.||.+|+++|++|++|.|||+|+|.++. ...|+| ..+
T Consensus 108 lgl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~-----------------------~~~~~d-~~~ 163 (335)
T 1u6e_A 108 LGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP-----------------------TIDMYD-RGN 163 (335)
T ss_dssp HTCTTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG-----------------------GCCTTC-TTT
T ss_pred hCCCCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc-----------------------ccCccc-ccc
Confidence 9998 599999999999999999999999999999999999997532 112343 357
Q ss_pred ceeeccceEEEEEccchHHHhcCCeEEEEEEEE-EEecCCCCCC--------CC-------CCCh--------HHHHHHH
Q 011989 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGY-GMSGDAHHIT--------QP-------HIDG--------KGAILAM 341 (473)
Q Consensus 286 G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~-~~~~d~~~~~--------~~-------~~~~--------~~~~~a~ 341 (473)
++++||||+|+||++.+. ++ ++..+.+. +...+..+.+ .| ...+ ..+.+++
T Consensus 164 ~~~~gDGA~A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 238 (335)
T 1u6e_A 164 CFIFADGAAAVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVG 238 (335)
T ss_dssp TTTBCEEEEEEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHH
T ss_pred ceEeccccEEEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHH
Confidence 899999999999997653 12 22233221 1111100000 00 1112 3567889
Q ss_pred HHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHH-HhC
Q 011989 342 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAI-HHG 420 (473)
Q Consensus 342 ~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l-~~~ 420 (473)
+++|+++|++++|||||++|+++++..|. +.+.++.... . .+...+..+||+.+|+..+. +.++ +.+
T Consensus 239 ~~al~~agl~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~~-~--~~~~~~~~~Gnt~sAs~~~~----L~~~~~~~ 306 (335)
T 1u6e_A 239 RRAMDAAGVRPDQIDVFVPHQANSRINEL-----LVKNLQLRPD-A--VVANDIEHTGNTSAASIPLA----MAELLTTG 306 (335)
T ss_dssp HHHHHHHTCCGGGCCEEEECCSCHHHHHH-----HHHHHTCCTT-C--EECCTHHHHCBCGGGHHHHH----HHHHHHHT
T ss_pred HHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCch-h--hhhhhhhhhCcHHHHHHHHH----HHHHHHcC
Confidence 99999999999999999999999988665 4455664321 1 23334678999999996543 3333 222
Q ss_pred ccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 421 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 421 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
. ..+.+.+|+++||+|+++.++||+.
T Consensus 307 ~-------------------------~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 307 A-------------------------AKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp S-------------------------SCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred C-------------------------CCCCCEEEEEEEehhheeEEEEEEe
Confidence 1 1224688999999999999999975
No 46
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.93 E-value=2.7e-27 Score=237.78 Aligned_cols=318 Identities=16% Similarity=0.117 Sum_probs=207.7
Q ss_pred eEEEecceecccCC-CHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccCCC
Q 011989 41 VVVTGIGMVTPLGC-GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLN 119 (473)
Q Consensus 41 v~ItG~g~~~p~g~-~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~ 119 (473)
+.|+|+|+..|... +.+++|+.+.... .+.+..+|....+ ...++..+.. ... ...|+..+-++
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~---~~~~~~~~~~~i~-------~~~GI~~R~~--~~~---~~~~~~~~~~~ 74 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRH---TDHPQLPLALRLI-------ENTGVRTRHI--VQP---IEDTLEHPGFE 74 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHH---TTCTTHHHHHHHH-------HHTCCCEEEE--SSC---HHHHTSCCCHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhc---cChhhHHHHHHHH-------HhcCCCccee--ecC---hhhhccCCChh
Confidence 69999999999864 7899998775432 1111111100000 0011111110 000 00122111133
Q ss_pred chhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHH
Q 011989 120 SKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMA 199 (473)
Q Consensus 120 ~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (473)
++.....++..+|+++|+++||++||+++++++ .|++++..+ +. .+..
T Consensus 75 ~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~id-----~vi~~t~~~----------------------~~-----~p~~ 122 (382)
T 1u0m_A 75 DRNKVYEREAKSRVPAVIQRALDDAELLATDID-----VIIYVSCTG----------------------FM-----MPSL 122 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSS----------------------CC-----SSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEEecCC----------------------CC-----CCcH
Confidence 444444566789999999999999999887776 777777431 11 1245
Q ss_pred HHHHHHhcCCCC--Ceeee-cCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCC
Q 011989 200 SGHVSMKYGFQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (473)
Q Consensus 200 a~~ia~~lgl~G--p~~~v-~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
+.+|+..||+++ |++++ .++|+|++.||..|+++|++|.+|.|||+|+|.++. .
T Consensus 123 a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~-~---------------------- 179 (382)
T 1u0m_A 123 TAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL-C---------------------- 179 (382)
T ss_dssp HHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGG-G----------------------
T ss_pred HHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccch-h----------------------
Confidence 679999999998 88999 899999999999999999999999999999997432 1
Q ss_pred CcCccCCCC----ceeeccceEEEEEccchHHHhcCCeEEEEEEEEEE--ecCCCC----------------CCCCCCCh
Q 011989 277 SRPFDCGRD----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHH----------------ITQPHIDG 334 (473)
Q Consensus 277 ~~pfd~~~~----G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~--~~d~~~----------------~~~~~~~~ 334 (473)
.+|+|.+++ ++++||||+|+||++.+. ++ .+|.++.. ..++.+ ...+....
T Consensus 180 ~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~---~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 252 (382)
T 1u0m_A 180 YQPTDLGVGSLLCNGLFGDGIAAAVVRGRGG---TG----VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATME 252 (382)
T ss_dssp CCTTCCSHHHHHHHHHBCEEEEEEEEETTTC---SE----EEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHH
T ss_pred cCcccCCHHHhhccchhcCCcEEEEEeccCC---CC----cEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHH
Confidence 123443333 889999999999987543 22 24555443 233321 01122224
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCcee-eccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF-SSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v-~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
..+. +++++|+++|++++|||||++|+++++..|.+ .+.++... .++++ ...+..+||+.+|+..+.|..+
T Consensus 253 ~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i~d~~-----~~~lgl~~--~k~~~s~~~~~~~Gnt~sAsi~~~L~~~ 324 (382)
T 1u0m_A 253 PLAP-ALKELAGEHGWDASDLDFYIVHAGGPRILDDL-----STFLEVDP--HAFRFSRATLTEYGNIASAVVLDALRRL 324 (382)
T ss_dssp HHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHHHHHH-----HHHSCSCG--GGGHHHHHHHHHTCBCTTHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHHHHHH-----HHHcCCCH--HHHHHHHHHHHHhCCchhhHHHHHHHHH
Confidence 5667 99999999999999999999999999876643 34444321 12332 2457789999999988766555
Q ss_pred HHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 414 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 414 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
+ +.+.+. +-..++..+||.|.+..+++|+-
T Consensus 325 ~---~~g~~~-------------------------~Gd~vll~~~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 325 F---DEGGVE-------------------------EGARGLLAGFGPGITAEMSLGCW 354 (382)
T ss_dssp H---HSCCCC-------------------------SSCCCEEEEEETTTEEEEEEEEE
T ss_pred H---HhcCCC-------------------------CCCEEEEEEEcccceeEEEEEEE
Confidence 4 333321 12356667999998988888864
No 47
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=99.93 E-value=6e-28 Score=250.07 Aligned_cols=283 Identities=15% Similarity=0.081 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcCC
Q 011989 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (473)
Q Consensus 130 ~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 209 (473)
.+|+.+|+++||+|||+++.+++ ..-.++++....... .+..........++..++..+|+
T Consensus 43 ~dL~a~Ai~~AL~dAGl~p~~Vd-~vI~g~~~~~~~~~~------------------~~~~~~~g~~~~~~~~va~~lGl 103 (520)
T 4egv_A 43 VELATEAAKAALHDCGADADTVA-RAIDTVAGTRQFEIS------------------GPASAPLGVSSNYPRSVARNIGA 103 (520)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHH-HHCCEEEECCC--------------------------------CCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCcCHHHcc-eEEEEEeeccccccc------------------chhhhhhccccCHHHHHHHHcCC
Confidence 46889999999999999887654 111133333221100 00011122334566788999999
Q ss_pred CC-CeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhh---------------------------
Q 011989 210 QG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK--------------------------- 261 (473)
Q Consensus 210 ~G-p~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~--------------------------- 261 (473)
.+ +.+++..+|+|++.+|..|++.|++|++|+||++|+|++++.........
T Consensus 104 ~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 183 (520)
T 4egv_A 104 DPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYT 183 (520)
T ss_dssp CCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTT
T ss_pred CCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHH
Confidence 87 67788999999999999999999999999999999999865322110000
Q ss_pred ----------------hhccccc------c---------------CCCCCCC--------------------CcCccCCC
Q 011989 262 ----------------SRALTTK------Y---------------NGTPQEA--------------------SRPFDCGR 284 (473)
Q Consensus 262 ----------------~~~~~~~------~---------------~~~~~~~--------------------~~pfd~~~ 284 (473)
....... + ...++.. +.|+-...
T Consensus 184 ~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~ 263 (520)
T 4egv_A 184 IRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLM 263 (520)
T ss_dssp GGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGG
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCccccc
Confidence 0000000 0 0001100 11222223
Q ss_pred CceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecC--CCCCCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEEc
Q 011989 285 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGD--AHHITQPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAH 361 (473)
Q Consensus 285 ~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d--~~~~~~~~~-~~~~~~~a~~~al~~agl~~~dId~v~~h 361 (473)
|...++|||+|+||.+++.|+++|.+++++|.+++.... ......++. ...+...+++++|+++|++++|||++|+|
T Consensus 264 nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~ 343 (520)
T 4egv_A 264 VARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLY 343 (520)
T ss_dssp CC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEEC
T ss_pred ccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEe
Confidence 455589999999999999999999998888877765442 222223322 24678899999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhccc-CCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCCC
Q 011989 362 ATSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 438 (473)
Q Consensus 362 gtgt~~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~ 438 (473)
... .++..+..+.++... ...++.++..+.++||+++++|+..+++++++||++..+..++ .+++.+++.
T Consensus 344 dAF-----~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~ 414 (520)
T 4egv_A 344 SCF-----PFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASK 414 (520)
T ss_dssp CSS-----SHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTE
T ss_pred CCc-----HHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeee
Confidence 321 223333444444321 1235667777779999999999999999999999998887665 466666554
No 48
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.93 E-value=1.3e-25 Score=225.23 Aligned_cols=325 Identities=14% Similarity=0.099 Sum_probs=212.9
Q ss_pred CceEEEecceecccCC-CHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccC
Q 011989 39 RRVVVTGIGMVTPLGC-GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (473)
Q Consensus 39 ~~v~ItG~g~~~p~g~-~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 117 (473)
+++.|+|+|+..|... +.+++|+.+....+. +.+..+|....+. ..++..+.. ... ...||+.+|
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~i~~-------~~Gi~~R~~--~~~---~~~~~~~~~ 77 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSD--KAETNEKVKRIFE-------QSQIKTRHL--VRD---YTKPENSIK 77 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCS--CHHHHHHHHHHHH-------TTCCCEECC--SSC---TTSGGGCGG
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhcc--ChHHHHHHHHHHH-------hCCcCccee--ecC---ccccccccc
Confidence 3689999999999875 789999887643210 0000011000000 001111100 000 012666665
Q ss_pred -CCchhhhcc-----CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcch
Q 011989 118 -LNSKDHRSI-----ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFI 191 (473)
Q Consensus 118 -~~~~~~~~~-----~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (473)
.+.++...+ ++..+|+++|+++||++||+++++++ .|+++++.+ +.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id-----~vi~~t~~~----------------------~~- 129 (374)
T 2h84_A 78 FRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT-----HIVSVTSTG----------------------II- 129 (374)
T ss_dssp GGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC----------------------CC-
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCC----------------------CC-
Confidence 444444455 78899999999999999999888876 788887542 11
Q ss_pred hhhhhhHHHHHHHHhcCCCC--Ceeeec-CCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccc
Q 011989 192 PRILINMASGHVSMKYGFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK 268 (473)
Q Consensus 192 ~~~~~~~~a~~ia~~lgl~G--p~~~v~-~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~ 268 (473)
.+..+.+|+..||+++ |++.+. ++|+|++.||.+|+++|++|.++.|||+|+|.++...
T Consensus 130 ----~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~-------------- 191 (374)
T 2h84_A 130 ----IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHF-------------- 191 (374)
T ss_dssp ----SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGGC--------------
T ss_pred ----CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhh--------------
Confidence 1235779999999998 789996 8999999999999999999999999999999853211
Q ss_pred cCCCCCCCCcCccCC--CCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEec--CCC------------CC----C
Q 011989 269 YNGTPQEASRPFDCG--RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG--DAH------------HI----T 328 (473)
Q Consensus 269 ~~~~~~~~~~pfd~~--~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~--d~~------------~~----~ 328 (473)
..|.|.+ .+++++||||+|+||++.+.+..++ ++ ++.+.+... ++. +. .
T Consensus 192 --------~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (374)
T 2h84_A 192 --------SNTDGGDQMVASSIFADGSAAYIIGCNPRIEETP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDAS 260 (374)
T ss_dssp --------CCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTT
T ss_pred --------cCCCCHHHHhhhhhhccCcEEEEEecCCCcccCC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCch
Confidence 0112211 2478999999999999876543222 33 666655431 111 00 0
Q ss_pred CCCCChHHHHHHHHHHHHHcC------CCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhh
Q 011989 329 QPHIDGKGAILAMTRALKQSG------LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHL 401 (473)
Q Consensus 329 ~~~~~~~~~~~a~~~al~~ag------l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~ 401 (473)
.+......+.++++++|+++| ++++||||| +|+++++..|.++ +.++... .+++++ .+...+||+
T Consensus 261 v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~~~-----~~lgl~~--~k~~~s~~~~~~~Gnt 332 (374)
T 2h84_A 261 IPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMNIE-----NSLGIDP--KQTKNTWDVYHAYGNM 332 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHHHH-----HHTTCCG--GGGHHHHHHHHHHCBC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHHHH-----HHcCCCH--HHHHHHHHHHHHhCCc
Confidence 000112456788999999999 999999999 9999998766443 4455332 234432 445789999
Q ss_pred HHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 402 LGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 402 ~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
.+|+-.+.|..++ +.+. +-..++..+||.|-+..+++|+..
T Consensus 333 ~sasi~~~L~~~~---~~~~---------------------------~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 333 SSASVIFVMDHAR---KSKS---------------------------LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp TTHHHHHHHHHHH---TCSC---------------------------CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred hhhHHHHHHHHHH---hhcC---------------------------CCCeEEEEEeccchhhhhhhheec
Confidence 9888776555443 2211 234667779999888889998865
No 49
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.93 E-value=6.7e-26 Score=254.35 Aligned_cols=271 Identities=12% Similarity=0.063 Sum_probs=189.7
Q ss_pred hhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHH
Q 011989 123 HRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH 202 (473)
Q Consensus 123 ~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 202 (473)
.+.++...+|+++|+++||+|||+++++++ .|+++++.+. ..+..+..
T Consensus 683 ~~~~~~~~~la~~Aa~~AL~~agl~~~dId-----~ii~~t~~~~---------------------------~~p~~a~~ 730 (979)
T 3tsy_A 683 EIITAEVPKLGKEAALKALKEWGQPKSKIT-----HLVFCTTSGV---------------------------EMPGADYK 730 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSCC---------------------------CSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEEeeCCC---------------------------CCCcHHHH
Confidence 334445677999999999999999988887 7888774311 12356789
Q ss_pred HHHhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcC
Q 011989 203 VSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRP 279 (473)
Q Consensus 203 ia~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 279 (473)
|+..||++++ ++.++++|++++.||..|.++|++|.++.|||+|+|.+..... ......
T Consensus 731 v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~~------------------~~~~~~ 792 (979)
T 3tsy_A 731 LANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFR------------------GPSEDA 792 (979)
T ss_dssp HHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTCC------------------CCCSSC
T ss_pred HHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhee------------------CCCccC
Confidence 9999999874 4899999999999999999999999999999999997322110 011112
Q ss_pred ccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCCCCCCC----------------hHHHHHHHHH
Q 011989 280 FDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID----------------GKGAILAMTR 343 (473)
Q Consensus 280 fd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~----------------~~~~~~a~~~ 343 (473)
++...+++++||||+|+||++.+.+..++..++....++....+..+...+... .....+++++
T Consensus 793 ~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 872 (979)
T 3tsy_A 793 LDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQ 872 (979)
T ss_dssp HHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHH
Confidence 222234678999999999998777655666677766676665554432221111 1235789999
Q ss_pred HHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHHHHHHHHHhCcc
Q 011989 344 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHGVA 422 (473)
Q Consensus 344 al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 422 (473)
+|+++|++++||||+++|..+++..|.++ +.++... .++..+ ..-..+||+.+||=.+.|..+...++.|..
T Consensus 873 al~~agl~~~did~~~~Hq~~~~i~~~~~-----~~lgl~~--~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~ 945 (979)
T 3tsy_A 873 AFDPLGISDWNSLFWIAHPGGPAILDAVE-----AKLNLDK--KKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGER 945 (979)
T ss_dssp HHGGGTCCCGGGSEEEECCSCHHHHHHHH-----HHHTCCT--TTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTC
T ss_pred HHhhcCCCCcccceEEECCCChHHHHHHH-----HHcCCCh--HHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhccccc
Confidence 99999999999999999988877655443 3344322 122222 124578999999988888776665544321
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 423 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 423 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
+. ........+..+||.|-+..+++|+-
T Consensus 946 -----------------v~----~g~~~~~~ll~~~G~G~t~~~~~l~~ 973 (979)
T 3tsy_A 946 -----------------AT----TGEGLDWGVLFGFGPGLTIETVVLHS 973 (979)
T ss_dssp -----------------SB----TTTTCSEEEEEEECGGGEEEEEEEEC
T ss_pred -----------------cc----CCCCcceeEEEEeCCchHHHHHHHHh
Confidence 10 11234566778999988888888863
No 50
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.91 E-value=3.5e-24 Score=215.92 Aligned_cols=255 Identities=16% Similarity=0.167 Sum_probs=180.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
....+|+++|+++||+++|+++++++ .|++++..+ +. .+..+.+|+..
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id-----~vi~~t~~~----------------------~~-----~p~~a~~v~~~ 158 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIG-----LLVLATSTG----------------------FI-----APGVDVAIVKE 158 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEE-----EEEEEESSC----------------------CC-----SSCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------Cc-----cChHHHHHHHH
Confidence 35679999999999999999776665 667776432 11 12356789999
Q ss_pred cCCCCC--eeee-cCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCC
Q 011989 207 YGFQGP--NHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283 (473)
Q Consensus 207 lgl~Gp--~~~v-~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~ 283 (473)
||++++ .+.+ .++|+|++.||..|.++|++|.+|.|||+|+|.++.... |+.+
T Consensus 159 lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~~------------------------~~~~ 214 (393)
T 1ted_A 159 LGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAV------------------------FADD 214 (393)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGCC------------------------CCSS
T ss_pred cCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccCC------------------------CCCC
Confidence 999985 5777 899999999999999999999999999999997542110 2233
Q ss_pred CC----ceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEe--cCCCCCC-------------C---CCCChHHHHHHH
Q 011989 284 RD----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--GDAHHIT-------------Q---PHIDGKGAILAM 341 (473)
Q Consensus 284 ~~----G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~--~d~~~~~-------------~---~~~~~~~~~~a~ 341 (473)
++ ++++||||+|+||++.+.+..++. .+++|.+++.. .|+.... . +......+.+++
T Consensus 215 r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i 293 (393)
T 1ted_A 215 INDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVV 293 (393)
T ss_dssp HHHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred HHHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHH
Confidence 33 789999999999997764422232 44677877544 5542210 0 111224567889
Q ss_pred HHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHHHHHHHHHhC
Q 011989 342 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHG 420 (473)
Q Consensus 342 ~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l~~~ 420 (473)
+++|+++|++++|||||++|+++++..|.++ +.++... .++.++ .....+||+.+|+-.+.|..+ ++.+
T Consensus 294 ~~aL~~agl~~~dId~~~~H~~~~~i~d~~~-----~~lgl~~--~k~~~s~~~~~~~GNt~sAsi~~~L~~~---~~~g 363 (393)
T 1ted_A 294 TEMLWDNGLQISDIDLWAIHPGGPKIIEQSV-----RSLGISA--ELAAQSWDVLARFGNMLSVSLIFVLETM---VQQA 363 (393)
T ss_dssp HHHHHHTTCCGGGCSCEEECCSCHHHHHHHH-----HHHTCCG--GGGHHHHHHHHHHCBCTHHHHHHHHHHH---HHSC
T ss_pred HHHHHHcCCCHhHCCEEEECCCcHHHHHHHH-----HHcCCCH--HHHHHHHHHHHhhCCchHhHHHHHHHHH---HhcC
Confidence 9999999999999999999999998866544 3344322 123321 356789999988866644333 2332
Q ss_pred ccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 421 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 421 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
.+ .++-+.++..+||.|.+..+++|+..
T Consensus 364 ~~------------------------~~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 364 ES------------------------AKAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp SS------------------------SSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred cc------------------------CCCCCeEEEEEeccchhhhhhheeec
Confidence 21 01245788889999999999999754
No 51
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.90 E-value=7.4e-23 Score=202.60 Aligned_cols=261 Identities=18% Similarity=0.105 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhc
Q 011989 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (473)
Q Consensus 128 ~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 207 (473)
....|+.+|+++||+++|+++++++ .|++++...+ ...+..+.+++..|
T Consensus 67 ~~~~La~~Aa~~al~~ag~~~~~Id-----~vi~~t~~~~--------------------------~~~p~~a~~v~~~l 115 (345)
T 3s21_A 67 QASDAATQAARKALIDANIGIEKIG-----LLINTSVSRD--------------------------YLEPSTASIVSGNL 115 (345)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEECCSCCS--------------------------CSSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCC--------------------------CCCChHHHHHHHHh
Confidence 3578999999999999999988887 7888875421 11124577899999
Q ss_pred CCC--CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCC
Q 011989 208 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (473)
Q Consensus 208 gl~--Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~ 285 (473)
|++ .|++.++.+|+|++.||..|+++|++|.++.|||+|+|.++..... ...+... +...+++|+....
T Consensus 116 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~---~~~~~~~------~~~~~~~f~~~~~ 186 (345)
T 3s21_A 116 GVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEK---TLERMTS------PDVTEEEFRNELA 186 (345)
T ss_dssp TCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHHH---HHHHHTC------TTCCHHHHHHHHG
T ss_pred CCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhcc---ccccccC------Cccchhhhhhhcc
Confidence 996 6999999999999999999999999999999999999986544221 1112222 2346778888888
Q ss_pred ceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCC--CC-----CCCh--------HHHHHHHHHHHHHcCC
Q 011989 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHIT--QP-----HIDG--------KGAILAMTRALKQSGL 350 (473)
Q Consensus 286 G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~--~~-----~~~~--------~~~~~a~~~al~~agl 350 (473)
++++||||+|+||++.+... .+. .|.+.....++.+.. .+ ...+ ....++++++|+++|+
T Consensus 187 ~~~~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 261 (345)
T 3s21_A 187 ALTLGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGW 261 (345)
T ss_dssp GGGBCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ceeeccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999765321 112 345555444432211 11 1111 1234677899999999
Q ss_pred CCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCC
Q 011989 351 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 430 (473)
Q Consensus 351 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~ 430 (473)
+++|||++.+|..+... ...+.+.++... .+++ ..-..+||+.+|+-.+.|..++ +.+.+.
T Consensus 262 ~~~did~~v~Hq~~~~i-----~~~~~~~lgl~~--ek~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~~------- 322 (345)
T 3s21_A 262 AVEELDQFVIHQVSRPH-----TAAFVKSFGIDP--AKVM--TIFGEHGNIGPASVPIVLSKLK---ELGRLK------- 322 (345)
T ss_dssp CGGGCSEEEECCSCHHH-----HHHHHHHHTCCG--GGBC--CCHHHHCBCGGGHHHHHHHHHH---HHTCCC-------
T ss_pred CHHHCCEEEeCCCCHHH-----HHHHHHHcCcCH--HHce--eeHhhcCchHHHHHHHHHHHHH---HcCCCC-------
Confidence 99999999999655443 234444455332 1222 2335789999998777665543 333321
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEe
Q 011989 431 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 470 (473)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~ 470 (473)
+-..++..+||.|-+..+++|+
T Consensus 323 ------------------~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 323 ------------------KGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp ------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ------------------CCCEEEEEEEChhhhheEEEEE
Confidence 1245677799998888888875
No 52
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.89 E-value=9.6e-23 Score=200.87 Aligned_cols=294 Identities=18% Similarity=0.243 Sum_probs=194.0
Q ss_pred ceEEEecceecccC-CCHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCCCCCCcccCC
Q 011989 40 RVVVTGIGMVTPLG-CGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (473)
Q Consensus 40 ~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~ 118 (473)
++.|+|+|+..|.. .+.+++|+.+... ++. .+ .+|-. . ...+..+ .+.
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~--~~~-~~-~~~i~---------~-rtgi~~r-----------------~~~ 59 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQ--GIE-TS-DEWIV---------A-RTGIHAR-----------------YFA 59 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CC-CC-HHHHH---------H-HHCCSEE-----------------EEC
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhccc--cCC-CC-HHHhH---------H-hcCceEE-----------------EEc
Confidence 79999999999986 4889999887441 110 00 11100 0 0011100 000
Q ss_pred CchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhH
Q 011989 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (473)
Q Consensus 119 ~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (473)
.+ -.+...|+.+|+++||+++|+++++++ .|++++..+.. ..+.
T Consensus 60 ~~-----~~~~~~la~~Aa~~al~~ag~~~~~Id-----~vi~~t~~~~~--------------------------~~p~ 103 (333)
T 4dfe_A 60 EP-----DVTTSDLAFIASQRAIEAADIDPQSID-----LIIVATSTPDF--------------------------VFPS 103 (333)
T ss_dssp CT-----TCCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSS--------------------------SBSC
T ss_pred CC-----CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCc
Confidence 01 124678999999999999999988887 88998865321 1234
Q ss_pred HHHHHHHhcCC--CCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCC
Q 011989 199 ASGHVSMKYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (473)
Q Consensus 199 ~a~~ia~~lgl--~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (473)
.+.+++..||+ +.|+++++.+|+|++.||..|+++|++|.++.+||+|+|.++....
T Consensus 104 ~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~--------------------- 162 (333)
T 4dfe_A 104 TACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRILD--------------------- 162 (333)
T ss_dssp HHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCC---------------------
T ss_pred HHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccccC---------------------
Confidence 57789999999 5699999999999999999999999999999999999998533211
Q ss_pred CcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC---CCCC--------------CCCh-----
Q 011989 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQP--------------HIDG----- 334 (473)
Q Consensus 277 ~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~~--------------~~~~----- 334 (473)
++.+..++++||||+|+||++.+. .. |.++...+++.. ...| ...+
T Consensus 163 ---~~d~~~~~lfGDGA~A~vl~~~~~-----~~----i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~ 230 (333)
T 4dfe_A 163 ---FKDRTTCVLFGDGAGAVILQASDE-----PG----VLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFK 230 (333)
T ss_dssp ---TTCTTTTTTBCEEEEEEEEEEESS-----CS----EEEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHH
T ss_pred ---cccccceeeeccccEEEEEEEcCC-----CC----eEEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHH
Confidence 223346788999999999997551 12 223333333321 0000 0111
Q ss_pred ---HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHH
Q 011989 335 ---KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 411 (473)
Q Consensus 335 ---~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li 411 (473)
..+.++++++|+++|++++|||++.+|..+.+. ..++.+.++... .++.. ....+||+.+|+=.+.|.
T Consensus 231 ~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i-----~~~~~~~lgl~~--~~~~~--~l~~~GNt~sasi~~~L~ 301 (333)
T 4dfe_A 231 LAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRI-----MQSTCRKLGLPQ--ERMIV--TVGEHGNTSAASIPLALD 301 (333)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH-----HHHHHHHTTCCG--GGBCC--CHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH-----HHHHHHHhCCCH--HHhhh--hHHhcCchHHHHHHHHHH
Confidence 345678999999999999999999999766543 234444454322 12222 345789999998666554
Q ss_pred HHHHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEe
Q 011989 412 FAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 470 (473)
Q Consensus 412 ~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~ 470 (473)
.+ ++.+.+ .+-..++..+||.|-+..++||+
T Consensus 302 ~~---~~~g~~-------------------------~~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 302 VA---VRDGRI-------------------------KRGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp HH---HHTTCS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HH---HHcCCC-------------------------CCCCEEEEEEEchhheeEEEEEE
Confidence 33 344332 12245666789999898888886
No 53
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.84 E-value=4.3e-20 Score=186.65 Aligned_cols=269 Identities=13% Similarity=0.092 Sum_probs=182.7
Q ss_pred CCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhh
Q 011989 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (473)
Q Consensus 118 ~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (473)
+..+..........|+.+|+++||+++|+++++++ .|++++..+ . ..+
T Consensus 104 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-----~vi~~t~~~----------------------~-----~~p 151 (406)
T 2d3m_A 104 LNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEIT-----HLVFCTSCG----------------------V-----DMP 151 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC----------------------C-----EES
T ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCC----------------------C-----CCC
Confidence 34455555667889999999999999999887776 788877532 1 122
Q ss_pred HHHHHHHHhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCC
Q 011989 198 MASGHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (473)
Q Consensus 198 ~~a~~ia~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (473)
..+.+|+..||++++ .+++..+|+|++.||..|.++|++|.++.|||+|+|.++..+
T Consensus 152 ~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~E~~s~~~-------------------- 211 (406)
T 2d3m_A 152 SADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDLAENNRGARVLVVCAELTIMML-------------------- 211 (406)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTC--------------------
T ss_pred CHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhe--------------------
Confidence 356799999999885 789999999999999999999999999999999999743211
Q ss_pred CCCcCccC----CCCceeeccceEEEEEccchHHHhcC-CeEEEEEEEEEEecCCCC--------------CC----CCC
Q 011989 275 EASRPFDC----GRDGFVIGEGSGVLVLEELEHAKKRG-AKIYAEVRGYGMSGDAHH--------------IT----QPH 331 (473)
Q Consensus 275 ~~~~pfd~----~~~G~~~geGaaavvL~~~~~A~~~g-~~~~a~i~g~~~~~d~~~--------------~~----~~~ 331 (473)
..|+|. ...++++||||+|+||++.+.. + ...+.++.+.+...-+.. +. .+.
T Consensus 212 --~~~~d~~~~~~~~~~lfGDGAaA~vL~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~ 286 (406)
T 2d3m_A 212 --RAPNETHLDNAIGISLFGDGAAALIIGSDPII---GVEKPMFEIVCTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPM 286 (406)
T ss_dssp --CCCCSTTHHHHHHHTTBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHH
T ss_pred --eCCcccchhhhhccceeccceEEEEEecCCCC---ccCCCceEEEecccEEcCCCchhcceeeccCceEEEeCchHHH
Confidence 011221 1237889999999999875431 2 111235555543211100 00 000
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCccE----EEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHH
Q 011989 332 IDGKGAILAMTRALKQSGLQSHQVDY----VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAG 406 (473)
Q Consensus 332 ~~~~~~~~a~~~al~~agl~~~dId~----v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG 406 (473)
.......++++++|+++|++++ ||+ +.+|..+++..|. +.+.++... .+++++ .+...+||+.+|+-
T Consensus 287 ~~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~~~~i~~~-----~~~~lgl~~--~k~~~s~~~l~~~GNt~sAsi 358 (406)
T 2d3m_A 287 TISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPGGRAILDQ-----VEAKLKLRP--EKFRAARTVLWDYGNMVSASV 358 (406)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCSCHHHHHH-----HHHHTTCCT--TTTHHHHHHHHHHCBCGGGHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCCCHHHHHH-----HHHHcCCCH--HHHHHHHHHHHHcCCchhhHH
Confidence 1123456789999999999998 999 9999988876554 344455332 234443 45788999999998
Q ss_pred HHHHHHHHHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 407 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 407 ~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
.+.|..++.. +. .| +...+ ......++..+||.|-+..+++|+..
T Consensus 359 ~~~L~~~~~~---g~-~~--G~~~~---------------g~~~d~vll~~fG~G~t~~~~ll~~~ 403 (406)
T 2d3m_A 359 GYILDEMRRK---SA-AK--GLETY---------------GEGLEWGVLLGFGPGITVETILLHSL 403 (406)
T ss_dssp HHHHHHHHHH---HH-HT--TCSBT---------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHHh---cc-cc--CCCcc---------------CCCcceEEEEEeccchhhhhHHhhhc
Confidence 8877666543 21 11 00000 01125777789999999999998753
No 54
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.84 E-value=1.8e-19 Score=180.51 Aligned_cols=249 Identities=16% Similarity=0.151 Sum_probs=165.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
.....|+.+|+++||+++|+++++++ .|+++++..+. ..+..+.+|+..
T Consensus 115 ~~~~~La~~Aa~~AL~~agi~~~dId-----~vi~~t~t~~~--------------------------~~p~~a~~v~~~ 163 (392)
T 3led_A 115 SILAEMAVTAAEQAIERWGKPRERIG-----AVLCACSNMQR--------------------------AYPAMAIEVQNA 163 (392)
T ss_dssp CHHHHHHHHHHHHHHHHHCSCGGGEE-----EEEEESSCCSC--------------------------SBSCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------CccHHHHHHHHH
Confidence 34679999999999999999887776 78888754221 122467789999
Q ss_pred cCCCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCCc
Q 011989 207 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (473)
Q Consensus 207 lgl~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~G 286 (473)
||++.+++.|+.+|++++.||..|.++|++|.++.|||+|+|.++.... +..+...
T Consensus 164 LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~~d------------------------~~dr~t~ 219 (392)
T 3led_A 164 LGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSGHLN------------------------FRDRDSH 219 (392)
T ss_dssp TTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCC------------------------TTCTTTT
T ss_pred hCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCCcCC------------------------cCcccCC
Confidence 9998899999999999999999999999999999999999997432110 1112346
Q ss_pred eeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC-C------C---CC----------CCCh--------HHHH
Q 011989 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-I------T---QP----------HIDG--------KGAI 338 (473)
Q Consensus 287 ~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-~------~---~~----------~~~~--------~~~~ 338 (473)
+++||||+|+||++.+.. .+ ...|.+....+++.. + . .+ ...+ ....
T Consensus 220 ~lFGDGA~A~vl~~~~~~--~~---~~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~ 294 (392)
T 3led_A 220 FIFGDVATAAIVERADDA--QG---GWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVS 294 (392)
T ss_dssp TTBCEEEEEEEEEEGGGC--CS---SEEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHH
T ss_pred cccccccEEEEEEecCCC--CC---CCeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHH
Confidence 889999999999875431 01 123455444433221 0 0 00 0011 1234
Q ss_pred HHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHH
Q 011989 339 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIH 418 (473)
Q Consensus 339 ~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~ 418 (473)
.+++++|+++|++++|||++.+| +.|-.+-....+++++......+.+ .+-..+||+.+|+=.+.|-. ++
T Consensus 295 ~~i~~~L~~~gl~~~dId~~v~H----qan~~i~~~~~~~llgl~~~~~k~~--~~l~~~GNtssAsipl~L~~----~~ 364 (392)
T 3led_A 295 EMIIEHAREIGIDPHGLKRMWLH----QANINMNEIIGRKVLGRDPTRDENV--IILDDYANTSSAGSIIAFHK----HQ 364 (392)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEEC----SSCHHHHHHHHHHHHTSCCCTTTBC--CCHHHHCBCGGGHHHHHHHH----CC
T ss_pred HHHHHHHHHcCCCHHHCcEEEEc----CCCHHHHHHHHHHhcCCCCCHHHHH--HHHhhhCccHHHHHHHHHHH----Hh
Confidence 57889999999999999999999 4433332222333334221111222 23357899988875554432 11
Q ss_pred hCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 419 HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 419 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
+.+ .+-..++..+||.|-+..+++|+.
T Consensus 365 -~~~-------------------------~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 365 -DDM-------------------------AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp -TTC-------------------------CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred -CCC-------------------------CCCCEEEEEEEChhhEeEEEEEEE
Confidence 111 123467777999999999999875
No 55
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.83 E-value=8.1e-20 Score=181.86 Aligned_cols=301 Identities=11% Similarity=0.056 Sum_probs=187.2
Q ss_pred CCCCCCCCCceEEEecceecccCC-CHHHHHHHHHcCCCceeeCCccccccCCCCccccccccCCcccceeEEecCCCCC
Q 011989 31 DPPPLSPLRRVVVTGIGMVTPLGC-GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISS 109 (473)
Q Consensus 31 ~~~~~~~~~~v~ItG~g~~~p~g~-~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (473)
+..|.++.+.+.|+|+|...|.-. +.+++.+.+. +. + .+|- .. ..++..
T Consensus 21 ~~~~~~~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~------~-~~~i---------~~-~tGI~~------------ 70 (365)
T 3gwa_A 21 SMTPAAHPPRAAIADIAGHLPEQVLTNDVLAQLYP-DW------P-AEKI---------LA-KTGIRE------------ 70 (365)
T ss_dssp --------CEEEEEEEEEECCSEEEEHHHHHHHCT-TC------C-HHHH---------HH-HHCCCE------------
T ss_pred ccCccceeccEEEEEEEEeCCCcEEcHHHHHHHcc-CC------C-HHHH---------HH-hcCccE------------
Confidence 335556678899999999999854 7777766541 11 1 1110 00 001111
Q ss_pred CCCCcccCCCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCc
Q 011989 110 GEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPF 189 (473)
Q Consensus 110 ~~fd~~~~~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~ 189 (473)
..+..+ -.....|+.+|+++||+++|+++++++ .|++++..++
T Consensus 71 -----R~~a~~-----~~~~~~La~~Aa~~aL~~ag~~~~~Id-----~vi~~t~~~~---------------------- 113 (365)
T 3gwa_A 71 -----RRIAAP-----RETAADLAYEAARKLFAQGAVGADQVD-----FVILCTQAPD---------------------- 113 (365)
T ss_dssp -----EEECCT-----TCCHHHHHHHHHHHHHHTTSCCGGGCC-----EEEEEESSCS----------------------
T ss_pred -----EEECCC-----CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCC----------------------
Confidence 111111 123578999999999999999988887 8888875422
Q ss_pred chhhhhhhHHHHHHHHhcCCC--CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhcccc
Q 011989 190 FIPRILINMASGHVSMKYGFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 267 (473)
Q Consensus 190 ~~~~~~~~~~a~~ia~~lgl~--Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~ 267 (473)
...+..+.+++..+|++ .+++.++.+|+|++.||..|.++|++|.++.|||+++|.++....
T Consensus 114 ----~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------ 177 (365)
T 3gwa_A 114 ----YVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYLH------------ 177 (365)
T ss_dssp ----CSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSC------------
T ss_pred ----CCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccCC------------
Confidence 11223567899999997 589999999999999999999999999999999999998543221
Q ss_pred ccCCCCCCCCcCccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC----------CCCCC------
Q 011989 268 KYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH----------ITQPH------ 331 (473)
Q Consensus 268 ~~~~~~~~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~----------~~~~~------ 331 (473)
+..+....++||||+|+||++.+.. ...+ ..+...+++.. ...|.
T Consensus 178 ------------~~dr~~~~lfGDGAaA~vl~~~~~~---~~~i----~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~ 238 (365)
T 3gwa_A 178 ------------PLDKSVRTLFGDGASATAVIAEHGE---LERI----GPFVFGTDGRGAPNLIVKAGLFREPKSADSAR 238 (365)
T ss_dssp ------------TTCHHHHTTBCCEEEEEEEEEECSS---SCSE----EEEEEEECGGGGGGEEECSSSSSSCCCTGGGC
T ss_pred ------------cccccccccccceeEEEEEEecCCC---CCce----EEEEEEEcCCCCCeEEecCCCcCCCCcccccc
Confidence 0001124579999999999875421 0112 12222222110 00000
Q ss_pred ----------------CC--------hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCC
Q 011989 332 ----------------ID--------GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG 387 (473)
Q Consensus 332 ----------------~~--------~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~ 387 (473)
.. .....++++++|+++|++++|||++.+|-.+.+ + ...+.+.++... .
T Consensus 239 ~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~----i-~~~~~~~Lgl~~--e 311 (365)
T 3gwa_A 239 EHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGEPRENIDCFVLHQANRF----M-LDALRKKMKIPE--H 311 (365)
T ss_dssp CEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH----H-HHHHHHHHTCCG--G
T ss_pred cccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH----H-HHHHHHHhCCCH--H
Confidence 01 123446789999999999999999999954333 2 344555555432 1
Q ss_pred CceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeE
Q 011989 388 SLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 467 (473)
Q Consensus 388 ~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~ 467 (473)
++. ..-..+||+.+|+=.+.|.. .++.+.+ .+-..++..+||.|-+..++
T Consensus 312 k~~--~~l~~~GNtssAsipl~L~~---~~~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~ 361 (365)
T 3gwa_A 312 KFP--VLMEHCGNTVSSTLPLALET---MRANGTL-------------------------ARGMRLMLLGFGVGYSWAGC 361 (365)
T ss_dssp GSC--CCCTTTCBCGGGHHHHHHHH---HHHTTCC-------------------------CTTCEEEEEEEETTTEEEEE
T ss_pred HHH--HHHhcccchHHHHHHHHHHH---HHHcCCC-------------------------CCCCEEEEEEEehhheeEEE
Confidence 223 23357899998886654433 3444332 12346677799999999888
Q ss_pred EEe
Q 011989 468 LFT 470 (473)
Q Consensus 468 vl~ 470 (473)
||+
T Consensus 362 ll~ 364 (365)
T 3gwa_A 362 LVN 364 (365)
T ss_dssp EEE
T ss_pred EEE
Confidence 886
No 56
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.80 E-value=2.9e-18 Score=167.81 Aligned_cols=241 Identities=18% Similarity=0.177 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+.+|+++||+++|+++++++ .|++++..+.. ..+..+.+++..+|
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~lG 106 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE-----LIIVATTSHSH--------------------------AYPSAACQVQGLLN 106 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC-----EEEEECSCCSC--------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCccHHHHHHHHhC
Confidence 578999999999999999988887 88888854321 11235778999999
Q ss_pred CC-CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCCce
Q 011989 209 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (473)
Q Consensus 209 l~-Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~G~ 287 (473)
++ .|++.++.+|+|++.||..|.++|++|.++.+||+++|.++.... +..+...+
T Consensus 107 l~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------------~~d~~~~~ 162 (323)
T 3il3_A 107 IDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRKLD------------------------ETDRSTVV 162 (323)
T ss_dssp CSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSCC------------------------TTCTTTTT
T ss_pred CCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccccC------------------------cccccccc
Confidence 96 489999999999999999999999999999999999997532210 11123467
Q ss_pred eeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC---CCCC------------CCCh--------HHHHHHHHHH
Q 011989 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQP------------HIDG--------KGAILAMTRA 344 (473)
Q Consensus 288 ~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~~------------~~~~--------~~~~~a~~~a 344 (473)
++||||+|+||++.+ +.. |.++...+++.. ...| ...+ ....++++++
T Consensus 163 lfGDGA~A~vl~~~~-----~~~----i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 233 (323)
T 3il3_A 163 LFGDGAGAVILEASE-----QEG----IISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEET 233 (323)
T ss_dssp TBCEEEEEEEEEEES-----SCC----EEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEEEcC-----CCC----eEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHH
Confidence 899999999999754 112 233333333221 0000 0111 2244678899
Q ss_pred HHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCccCC
Q 011989 345 LKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 424 (473)
Q Consensus 345 l~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp 424 (473)
|+++|++++|||++.+|-.+.+ + ...+.+.++... .++.. .-..+||+.+|+=.+.|..+ ++.+.+
T Consensus 234 l~~~gl~~~did~~v~Hq~~~~----i-~~~~~~~lgl~~--ek~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~-- 299 (323)
T 3il3_A 234 LLANNLDKKDLDWLVPHQANLR----I-ITATAKKLEMDM--SQVVV--TLDKYANNSAATVPVALDEA---IRDGRI-- 299 (323)
T ss_dssp HHTTTCCTTTCCEEEECCSCHH----H-HHHHHHHTTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTSS--
T ss_pred HHHcCCCHHHCCEEEEcCCCHH----H-HHHHHHHcCcCH--HHhhc--cHhhcCchHHHHHHHHHHHH---HHcCCC--
Confidence 9999999999999999954432 2 234444444322 12222 23467999999866655443 344332
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEe
Q 011989 425 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 470 (473)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~ 470 (473)
.+-..++..+||.|-+..++||+
T Consensus 300 -----------------------~~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 300 -----------------------QRGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp -----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -----------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 12345667799999999888886
No 57
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.80 E-value=9.8e-20 Score=180.67 Aligned_cols=243 Identities=16% Similarity=0.149 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+.+|+++||+++|+++++++ .|++++..+. ...+..+.+++..+|
T Consensus 74 ~~~La~~Aa~~aL~~agl~~~dId-----~vi~~t~~~~--------------------------~~~p~~a~~v~~~lG 122 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLPEDID-----LLLVNTLSPD--------------------------HHDPSQACLIQPLLG 122 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSSCS--------------------------SSBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-----EEEEEeCCCC--------------------------CCCCcHHHHHHHHcC
Confidence 468999999999999999988887 8888875432 111235678999999
Q ss_pred CCC-CeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccC-CCCc
Q 011989 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC-GRDG 286 (473)
Q Consensus 209 l~G-p~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~-~~~G 286 (473)
++. |.+.++.+|+|++.||..|.++|++|.++.|||+++|.++.... +-|. +...
T Consensus 123 l~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~~-----------------------~~d~~~~t~ 179 (359)
T 3h78_A 123 LRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMD-----------------------CSDRGRNLS 179 (359)
T ss_dssp CCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGCC-----------------------CSTTTHHHH
T ss_pred CCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccCC-----------------------ccccccccc
Confidence 975 89999999999999999999999999999999999997533210 0010 1134
Q ss_pred eeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC-----C------CCC--------------CCCh-------
Q 011989 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----I------TQP--------------HIDG------- 334 (473)
Q Consensus 287 ~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-----~------~~~--------------~~~~------- 334 (473)
+++||||+|+||++.+. .+..+ .++...+++.. . ..+ ...+
T Consensus 180 ~lfGDGAaA~vl~~~~~---~~~~i----~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~ 252 (359)
T 3h78_A 180 ILLGDGAGAVVVSAGES---LEDGL----LDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHA 252 (359)
T ss_dssp TTBCEEEEEEEEECCSC---SSSEE----EEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHH
T ss_pred ceecceeEEEEEEecCC---CCCce----EEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHH
Confidence 67999999999987542 12222 33332222210 0 001 0011
Q ss_pred -HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 -KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 -~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.....+++++|+++|++++|||++.+|-.+. .+ ...+.+.++... .+++. .-..+||+.+|+=.+.|..+
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~----~i-~~~~~~~lgl~~--ek~~~--~l~~~GNt~sAsi~l~L~~~ 323 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDIDHVICHQPNL----RI-LDAVQEQLGIPQ--HKFAV--TVDRLGNMASASTPVTLAMF 323 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEECCSCH----HH-HHHHHHHHTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HH-HHHHHHHhCcCH--HHhhh--hhhcccchHHHHHHHHHHHH
Confidence 2244678999999999999999999994433 22 344445555332 12332 23477999999866655443
Q ss_pred HHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 414 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 414 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
+ +. + .+-..++..+||.|-+..+++|+-
T Consensus 324 ~---~~--l-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 351 (359)
T 3h78_A 324 W---PD--I-------------------------QPGQRVLVLTYGSGATWGAALYRK 351 (359)
T ss_dssp G---GG--S-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred H---Hh--C-------------------------CCCCEEEEEEEchhhhheeeeEEe
Confidence 2 21 1 112356667899998999998873
No 58
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.79 E-value=1.5e-18 Score=172.07 Aligned_cols=246 Identities=16% Similarity=0.095 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhc
Q 011989 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (473)
Q Consensus 128 ~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 207 (473)
....|+.+|+++||+++|+++++++ .|++++...+ .| ... .++.+++..+
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId-----~vi~~t~~~~-------------------~~----d~~--~~a~~v~~~l 102 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVS-----LVLHSSLWFQ-------------------GI----DLW--PAASYVAHEA 102 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECSSCC-------------------SS----SSS--CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC-------------------Cc----ccc--cHHHHHHHHh
Confidence 4678999999999999999887776 7888875310 01 111 2367889999
Q ss_pred CCCC-CeeeecCCcchHHHHHHHHHHHHHcCCCC--EEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCC
Q 011989 208 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (473)
Q Consensus 208 gl~G-p~~~v~~acasg~~Al~~A~~~I~~G~~d--~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~ 284 (473)
|++. +.+.|+.+|+|++.||..|.++|++|.++ .|||+++|.++.+.. .+++ ++
T Consensus 103 G~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~~----------------------~~~~-~~ 159 (357)
T 3s3l_A 103 VGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPRI----------------------DRWN-SV 159 (357)
T ss_dssp TCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTTC----------------------CTTT-SS
T ss_pred CCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEeccccccc----------------------cccc-cc
Confidence 9975 89999999999999999999999999999 999999998543210 0122 12
Q ss_pred CceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC--C------CCC-------CCC----------------
Q 011989 285 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH--I------TQP-------HID---------------- 333 (473)
Q Consensus 285 ~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~--~------~~~-------~~~---------------- 333 (473)
..+++||||+|+||++.+. + ..|.++...+++.. . ..| ...
T Consensus 160 ~~~lfGDGA~A~vl~~~~~----~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 231 (357)
T 3s3l_A 160 DVTMYGDGAAALVLSTRDG----F----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPD 231 (357)
T ss_dssp SSCCBCCEEEEEEEESSCC----S----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTT
T ss_pred CCcccccccEEEEEecCCC----C----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhh
Confidence 5788999999999987431 1 23555555554431 0 001 000
Q ss_pred -----hHHHHHHHHHHHHHcCCCCCCccEEEE-cCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHH
Q 011989 334 -----GKGAILAMTRALKQSGLQSHQVDYVNA-HATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 407 (473)
Q Consensus 334 -----~~~~~~a~~~al~~agl~~~dId~v~~-hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~ 407 (473)
.....++++++|+++|++++|||++.+ |-.+.. -+. +.+.++... .++.. .....+||+.+|+=.
T Consensus 232 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~-----~~~~lgl~~--ek~~~-~~~~~~GNt~aAsip 302 (357)
T 3s3l_A 232 LTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHE-----LHDLLGLPD--ERTSW-AYGRTTGHVGAGDQY 302 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCC-----HHHHHTSCG--GGBTH-HHHHHHCBCTTCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHH-----HHHHcCCCH--HHhHH-HhccccccchHhHHH
Confidence 113445788999999999999999996 865554 333 333344322 12221 233357888888766
Q ss_pred HHHHHHHHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 408 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 408 ~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
+.|..+ ++.+.+ .+-..++..+||.|-+..+++|+-
T Consensus 303 l~L~~~---~~~g~l-------------------------~~Gd~vll~~fG~G~t~~a~ll~~ 338 (357)
T 3s3l_A 303 AGLAHL---VENALV-------------------------QPGDRVLLFGGGAGYTCTAAVVEI 338 (357)
T ss_dssp HHHHHH---HHTTCC-------------------------CTTCEEEEECCBTTTEEEEEEEEE
T ss_pred HHHHHH---HHcCCC-------------------------CCCCEEEEEEEchhhhheeeeEEe
Confidence 555433 343332 123466777999998888888864
No 59
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.79 E-value=1e-18 Score=176.62 Aligned_cols=266 Identities=12% Similarity=0.056 Sum_probs=176.5
Q ss_pred hhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHH
Q 011989 123 HRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH 202 (473)
Q Consensus 123 ~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 202 (473)
...++....|+.+|+++||+++|+++++++ .|+++++.+ . ..+..+.+
T Consensus 119 ~~~~~~~~~La~~Aa~~AL~~agl~~~~Id-----~li~~t~~~----------------------~-----~~p~~a~~ 166 (413)
T 1xes_A 119 AMLAMEVPRLAKEAAEKAIQEWGQSKSGIT-----HLIFCSTTT----------------------P-----DLPGADFE 166 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESCC----------------------C-----EESCHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------C-----ccchHHHH
Confidence 334457889999999999999999888877 788887542 1 12245678
Q ss_pred HHHhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcC
Q 011989 203 VSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRP 279 (473)
Q Consensus 203 ia~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 279 (473)
|+..||+++. .+.+..+|+|++.||..|.++|++|.++.|||+|+|.++..+. . +. .++
T Consensus 167 v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~----------~------~~--d~~ 228 (413)
T 1xes_A 167 VAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFR----------G------PS--ETH 228 (413)
T ss_dssp HHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTCC----------C------CC--TTC
T ss_pred HHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhhc----------C------CC--ccc
Confidence 9999999875 7899999999999999999999999999999999997543110 0 11 134
Q ss_pred ccCCCCceeeccceEEEEEccchHHHhcC-CeEEEEEEEEEEecCCC--CC------------C-CCC---CChHHHHHH
Q 011989 280 FDCGRDGFVIGEGSGVLVLEELEHAKKRG-AKIYAEVRGYGMSGDAH--HI------------T-QPH---IDGKGAILA 340 (473)
Q Consensus 280 fd~~~~G~~~geGaaavvL~~~~~A~~~g-~~~~a~i~g~~~~~d~~--~~------------~-~~~---~~~~~~~~a 340 (473)
|+....++++||||+|+||++.+.. + .....++.+.+....+. .. . ... .....+..+
T Consensus 229 ~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 305 (413)
T 1xes_A 229 LDSLVGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENC 305 (413)
T ss_dssp HHHHHHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHH
T ss_pred hhhcccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHH
Confidence 5555678999999999999875431 2 11112444443321110 00 0 000 112345678
Q ss_pred HHHHHHHcCCC-CCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHHHHHHHHH
Q 011989 341 MTRALKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIH 418 (473)
Q Consensus 341 ~~~al~~agl~-~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l~ 418 (473)
++++|+++|++ .+|| ++.+|..+... ..++.+.++... .++..+ .+...+||+.+|+-.+.|..++..-+
T Consensus 306 i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~Lgl~~--ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~ 377 (413)
T 1xes_A 306 MVEAFSQFKISDWNKL-FWVVHPGGRAI-----LDRVEAKLNLDP--TKLIPTRHVMSEYGNMSSACVHFILDQTRKASL 377 (413)
T ss_dssp HHHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHTTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCccce-eEEECCCCHHH-----HHHHHHHcCCCh--HHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcc
Confidence 89999999998 8888 89999654433 223444454322 233332 34567999999998887776654421
Q ss_pred -hCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 419 -HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 419 -~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
.|.+.| . .....++..+||.|-+..+++|+.
T Consensus 378 ~~G~~~~------------------G----~~~d~vll~~fG~G~t~~~~ll~~ 409 (413)
T 1xes_A 378 QNGCSTT------------------G----EGLEMGVLFGFGPGLTIETVVLKS 409 (413)
T ss_dssp HTTCSBT------------------T----TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred ccCCCCC------------------C----CCcceEEEEEecCCcEEeEEEEEe
Confidence 111000 0 012567777999988888888874
No 60
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.78 E-value=2.6e-18 Score=168.10 Aligned_cols=242 Identities=16% Similarity=0.164 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+.+|+++||+++|+++++++ .|++++...+ ...+..+.+++..||
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~~--------------------------~~~p~~a~~v~~~lG 100 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEID-----FILVATVTPD--------------------------FNMPSVACQVQGAIG 100 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCS--------------------------CSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCC--------------------------cCCCcHHHHHHHHcC
Confidence 678999999999999999988887 8888875422 112245778999999
Q ss_pred CC-CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCCce
Q 011989 209 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (473)
Q Consensus 209 l~-Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~G~ 287 (473)
++ .|.+.++.+|+|++.||..|.++|++|.++.+||+++|.++.... +..+....
T Consensus 101 l~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------------~~dr~~~~ 156 (321)
T 3il6_A 101 ATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLD------------------------WTDRSTAV 156 (321)
T ss_dssp CTTCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGGGSC------------------------TTCTTTGG
T ss_pred CCCceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccCC------------------------ccccccce
Confidence 97 489999999999999999999999999999999999998532110 11223467
Q ss_pred eeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCC------------C--CCC--------CCCChHH----HHHHH
Q 011989 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH------------H--ITQ--------PHIDGKG----AILAM 341 (473)
Q Consensus 288 ~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~------------~--~~~--------~~~~~~~----~~~a~ 341 (473)
++||||+|+||++.+. + .+ .++...+++. . ... ....+.. ..+.+
T Consensus 157 lfGDGA~A~vl~~~~~----~-~i----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 227 (321)
T 3il6_A 157 LFGDGAAGVLIEAAET----P-HF----LNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDV 227 (321)
T ss_dssp GBCCEEEEEEEEEESS----C-CE----EEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHH
T ss_pred eeccccEEEEEEEcCC----C-CE----EEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHH
Confidence 8999999999997542 1 12 2222222221 0 000 0011111 12333
Q ss_pred HHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 342 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 342 ~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
.++++++ +.++|||++.+|-.+.+ + ..++.+.++... .+++ ..-..+||+.+|+=.+.|-.+ ++.+.
T Consensus 228 ~~~i~~~-l~~~did~~v~Hq~~~~----i-~~~~~~~lgl~~--ek~~--~~l~~~GNt~sasi~~~L~~~---~~~g~ 294 (321)
T 3il6_A 228 SQNILSL-VTDETVDYLLLHQANVR----I-IDKIARKTKISR--EKFL--TNMDKYGNTSAASIPILLDEA---VENGT 294 (321)
T ss_dssp HHHHHTT-CCGGGCSEEEECCSCHH----H-HHHHHHHHTCCG--GGBC--CCGGGTCBCGGGHHHHHHHHH---HHTTS
T ss_pred HHHHHHH-cCcccCCEEEEcCCCHH----H-HHHHHHHcCcCH--HHhh--hhHhhcccHHHHHHHHHHHHH---HHhCC
Confidence 3444433 33899999999944332 2 344555555432 1233 245688999999866655433 44443
Q ss_pred cCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEe
Q 011989 422 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 470 (473)
Q Consensus 422 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~ 470 (473)
+.| .....++..+||.|-+..++||+
T Consensus 295 ~~~-----------------------G~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 295 LIL-----------------------GSQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp SCT-----------------------TSCCEEEEEEEETTTEEEEEEEE
T ss_pred CCC-----------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 211 11156777799999999998886
No 61
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.78 E-value=2e-18 Score=174.13 Aligned_cols=265 Identities=13% Similarity=0.081 Sum_probs=174.3
Q ss_pred CchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhH
Q 011989 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (473)
Q Consensus 119 ~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (473)
..+....+.....|+.+|+++||+++|+++++++ .|++++..+ . ..+.
T Consensus 97 ~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id-----~vi~~t~~~----------------------~-----~~p~ 144 (402)
T 1ee0_A 97 NARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKIT-----HLIFCTTAG----------------------V-----DMPG 144 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEECSSC----------------------C-----EESC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCC----------------------C-----CCCh
Confidence 3444445567789999999999999999888776 788887542 0 1234
Q ss_pred HHHHHHHhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCC
Q 011989 199 ASGHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (473)
Q Consensus 199 ~a~~ia~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (473)
.+.+|+..||+++. .+.+..+|+|++.||..|.++|++|.++.|||+++|.++..+
T Consensus 145 ~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~i~~g~~~~vLvvg~E~~s~~~--------------------- 203 (402)
T 1ee0_A 145 ADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDLAENNKGSRVLIVCSEITAILF--------------------- 203 (402)
T ss_dssp HHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHHHHHSTTCCEEEEEEECGGGGC---------------------
T ss_pred HHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhh---------------------
Confidence 57789999999873 789999999999999999999999999999999999743211
Q ss_pred CCcCccCC----CCceeeccceEEEEEccchHHHhcC-CeEEEEEEEEEEecCCCC--------------CCC-CC---C
Q 011989 276 ASRPFDCG----RDGFVIGEGSGVLVLEELEHAKKRG-AKIYAEVRGYGMSGDAHH--------------ITQ-PH---I 332 (473)
Q Consensus 276 ~~~pfd~~----~~G~~~geGaaavvL~~~~~A~~~g-~~~~a~i~g~~~~~d~~~--------------~~~-~~---~ 332 (473)
..|+|.+ ..++++||||+|+||++.+.. + .....++.+.+....+.. ... .. .
T Consensus 204 -~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~ 279 (402)
T 1ee0_A 204 -HGPNENHLDSLVAQALFGDGAAALIVGSGPHL---AVERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLM 279 (402)
T ss_dssp -CCCCTTCHHHHHHTTTBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCGGGEEEEEETTEECCEECTTHHHH
T ss_pred -cCCcccchhhhccceeEecceEEEEEecCCCc---cccCCceEEEeeeeEEcCCchHhcCceeccCceEEEecchHHHH
Confidence 1223321 257889999999999875431 1 111124444432211110 000 00 0
Q ss_pred ChHHHHHHHHHHHHHcCCC-CCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHH
Q 011989 333 DGKGAILAMTRALKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEA 410 (473)
Q Consensus 333 ~~~~~~~a~~~al~~agl~-~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l 410 (473)
....+..+++++|+++|++ .+|| ++.+|..+.... .++.+.++... .++..+ .+...+||+.+|+-.+.|
T Consensus 280 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~-----~~~~~~lgl~~--ek~~~s~~~l~~~GNtssAsi~~~L 351 (402)
T 1ee0_A 280 VAKNIENAAEKALSPLGITDWNSV-FWMVHPGGRAIL-----DQVERKLNLKE--DKLRASRHVLSEYGNLISACVLFII 351 (402)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSSHHHH-----HHHHHHTTCCT--TTTHHHHHHHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccccc-eEEECCCCHHHH-----HHHHHHcCCCh--HHhHHHHHHHHhcCCchhhHHHHHH
Confidence 1134557888999999998 8899 899996554332 23444444322 234433 345789999999988877
Q ss_pred HHHHHHHH-hCccCCCCCCCCCCCCCCCCCCccccCCCC-CCcEEEEeccccccceeeEEEee
Q 011989 411 IFAVLAIH-HGVAPLTLNLAKPDPIFNDNFMPLTASKDM-PISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 411 i~~~~~l~-~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
..++..=+ .|.+ ... ....++..+||.|-+..+++|+-
T Consensus 352 ~~~~~~g~~~G~~-----------------------~~G~~~d~vll~~fG~G~t~~~~ll~~ 391 (402)
T 1ee0_A 352 DEVRKRSMAEGKS-----------------------TTGEGLDCGVLFGFGPGMTVETVVLRS 391 (402)
T ss_dssp HHHHHHHHHTTCS-----------------------BTBTTBSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHhccccCCC-----------------------CCCCCcceEEEEEecCCcEEEEEEEEE
Confidence 66654421 1100 000 12467777999887888888864
No 62
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.78 E-value=3.5e-19 Score=179.23 Aligned_cols=219 Identities=14% Similarity=0.079 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhc
Q 011989 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (473)
Q Consensus 128 ~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 207 (473)
....|++.|+++||++ +++++++ .|++|+..+. ...+..+..|+..|
T Consensus 50 ~~~~la~~Aa~~aL~~--~~~~~Id-----~li~~t~~~~--------------------------~~~p~~a~~v~~~l 96 (396)
T 1xpm_A 50 DIVSMGANAAKDIITD--EDKKKIG-----MVIVATESAV--------------------------DAAKAAAVQIHNLL 96 (396)
T ss_dssp CHHHHHHHHHHTTCCH--HHHHHEE-----EEEEECSSCS--------------------------BSSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhc--CCHHHCC-----EEEEEeCCCC--------------------------CCCCCHHHHHHHHh
Confidence 3578999999999987 4433333 4566765432 01124667899999
Q ss_pred CCCC--CeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCC
Q 011989 208 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (473)
Q Consensus 208 gl~G--p~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~ 285 (473)
|+++ +++.+..+|+|++.||..|.++|++|.++.|||+|+|. .... ++ ..+
T Consensus 97 Gl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s~~~-------------------------~~-~~~ 149 (396)
T 1xpm_A 97 GIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-ARYG-------------------------LN-SGG 149 (396)
T ss_dssp TCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-ECCC-------------------------TT-CSS
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-hccc-------------------------cC-CCC
Confidence 9974 89999999999999999999999999999999999995 1110 11 136
Q ss_pred ceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEec-CCCCCCCCCC------ChHH--------HHHHHHHHHHHcCC
Q 011989 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG-DAHHITQPHI------DGKG--------AILAMTRALKQSGL 350 (473)
Q Consensus 286 G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~-d~~~~~~~~~------~~~~--------~~~a~~~al~~agl 350 (473)
++++||||+|+||++.+ .+++...+.+... +..+...|.. .+.. ..++++++|+++|+
T Consensus 150 ~~~~GdGA~A~vl~~~~-------~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl 222 (396)
T 1xpm_A 150 EPTQGAGAVAMVIAHNP-------SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGK 222 (396)
T ss_dssp GGGCEEEEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcccccceEEEEeccCC-------ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88999999999998632 2444444433322 3332222221 3333 56789999999999
Q ss_pred CCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCc-----eeeccccchhhhHHhHHHHHHHHHHH
Q 011989 351 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL-----AFSSTKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 351 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~-----~v~s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
+++||||+.+|.++++..|.+....+....+... ..+ |-......+||+.+||-.+.|..++.
T Consensus 223 ~~~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~--e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~ 290 (396)
T 1xpm_A 223 SLADFASLCFHVPFTKMGKKALESIIDNADETTQ--ERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE 290 (396)
T ss_dssp CGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHH--HHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH
T ss_pred CHHHCCEEEecCCchHHHHHHHHHHHhhcccCCH--HHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH
Confidence 9999999999999998877654322111000000 001 11122367999999998777765543
No 63
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.76 E-value=1e-17 Score=169.39 Aligned_cols=264 Identities=13% Similarity=0.064 Sum_probs=172.6
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHH
Q 011989 125 SIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 204 (473)
Q Consensus 125 ~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 204 (473)
.......|+.+|+++||+++|+++++++ .|+++++.+. ..+..+.+++
T Consensus 116 ~~~~~~~La~~Aa~~aL~~agl~~~dId-----~li~~t~~~~---------------------------~~p~~a~~v~ 163 (413)
T 2p0u_A 116 AVAQVPKLAKEASMNAIKEWGRPKSEIT-----HIVMATTSGV---------------------------NMPGAELATA 163 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCGGGCC-----EEEEEESSCC---------------------------CBSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCHHHCC-----EEEEEecCCc---------------------------ccCcHHHHHH
Confidence 3356789999999999999999888877 7888875421 1224567899
Q ss_pred HhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCcc
Q 011989 205 MKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 281 (473)
Q Consensus 205 ~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd 281 (473)
..||+++. .+.+..+|+|++.||..|.++|++|.++.|||+|+|.++.... . + ..++|+
T Consensus 164 ~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~sg~~~~vLvvg~E~~s~~~~----------~------~--~d~~~~ 225 (413)
T 2p0u_A 164 KLLGLRPNVRRVMMYQQGAFAGATVLRVAKDLAENNAGARVLAICSEVTAVTFR----------A------P--SETHID 225 (413)
T ss_dssp HHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECSTTTCC----------C------C--CTTCHH
T ss_pred HHhCCCCCcceEeEECCccHHHHHHHHHHHHHHHhCCCCEEEEEEEhhcchhcc----------C------C--CccChh
Confidence 99999874 7889999999999999999999999999999999997542110 0 0 012344
Q ss_pred CCCCceeeccceEEEEEccchHHHhcC-CeEEEEEEEEEEecCCCC---C-----------C-CCC---CChHHHHHHHH
Q 011989 282 CGRDGFVIGEGSGVLVLEELEHAKKRG-AKIYAEVRGYGMSGDAHH---I-----------T-QPH---IDGKGAILAMT 342 (473)
Q Consensus 282 ~~~~G~~~geGaaavvL~~~~~A~~~g-~~~~a~i~g~~~~~d~~~---~-----------~-~~~---~~~~~~~~a~~ 342 (473)
....++++||||+|+||++.+.. + .....++.+.+....+.. . . ... .....+..+++
T Consensus 226 ~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 302 (413)
T 2p0u_A 226 GLVGSALFGDGAAAVIVGSDPRP---GIERPIYEMHWAGEMVLPESDGAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLK 302 (413)
T ss_dssp HHHHHHHBCCEEEEEEEESSCCT---TTCCCSEEEEEEEEEECTTCTTSSEEEEETTEEEEECCSCHHHHHHHHHHHHHH
T ss_pred hhcccceeecccEEEEEecCCCc---cccCCceEEEecccEEeCCChhhcCceEecCceEEEeccHHHHHHHHHHHHHHH
Confidence 44568899999999999875431 1 111123444332211100 0 0 000 01234567889
Q ss_pred HHHHHcCCC-CCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHHHHHHHHHhC
Q 011989 343 RALKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHG 420 (473)
Q Consensus 343 ~al~~agl~-~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l~~~ 420 (473)
++|+++|++ .+|| ++.+|..+... ..++.+.++... .++..+ .+-..+||+.+|+-.+.|-.++..-++
T Consensus 303 ~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~Lgl~~--ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~- 373 (413)
T 2p0u_A 303 DTKNLVGASSWNEL-FWAVHPGGPAI-----LDQVEAKLELEK--GKFQASRDILSDYGNMSSASVLFVLDRVRERSLE- 373 (413)
T ss_dssp HHHHHTTCCSGGGS-EEEECCSSHHH-----HHHHHHHTTCCG--GGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHH-
T ss_pred HHHHHcCCCCccce-EEEECCCCHHH-----HHHHHHHhCCCH--HHHHHHHHHHHHcCcchhhHHHHHHHHHHHhccc-
Confidence 999999998 7888 89999655443 233444444321 123332 334678999999988877666544211
Q ss_pred ccCCCCCCCCCCCCCCCCCCccccCCCC-CCcEEEEeccccccceeeEEEee
Q 011989 421 VAPLTLNLAKPDPIFNDNFMPLTASKDM-PISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 421 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
| ..+... ....++..+||.|-+..+++|+.
T Consensus 374 --~-------------------G~~~~g~~~d~vll~~fG~G~t~~~~ll~~ 404 (413)
T 2p0u_A 374 --S-------------------NKSTFGEGSEWGFLIGFGPGLTVETLLLRA 404 (413)
T ss_dssp --T-------------------TCSBTTTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred --c-------------------CCcccCCCcceEEEEEeCccceeeeeeEEE
Confidence 0 000001 12567777999888888888864
No 64
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.76 E-value=1e-17 Score=168.28 Aligned_cols=267 Identities=10% Similarity=0.045 Sum_probs=177.0
Q ss_pred CCchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhh
Q 011989 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (473)
Q Consensus 118 ~~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (473)
+..+....+.....|+.+|+++||+++|+++++++ .|++++..+. ..+
T Consensus 87 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~~---------------------------~~p 134 (387)
T 3a5r_A 87 LNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT-----HLIVCCLAGV---------------------------DMP 134 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSCC---------------------------EES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCC---------------------------CCC
Confidence 33444555567889999999999999999888877 7888875421 123
Q ss_pred HHHHHHHHhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCC
Q 011989 198 MASGHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (473)
Q Consensus 198 ~~a~~ia~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (473)
..+.+|+..||+++. .+.+..+|+|++.||..|.++|++|.++.|||+++|.++..+
T Consensus 135 ~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-------------------- 194 (387)
T 3a5r_A 135 GADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCF-------------------- 194 (387)
T ss_dssp CHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTTC--------------------
T ss_pred cHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchhh--------------------
Confidence 467789999999875 788999999999999999999999999999999999753211
Q ss_pred CCCcCcc----CCCCceeeccceEEEEEccchHHHhcC-CeEEEEEEEEEEecCCCCCC---------------CCC---
Q 011989 275 EASRPFD----CGRDGFVIGEGSGVLVLEELEHAKKRG-AKIYAEVRGYGMSGDAHHIT---------------QPH--- 331 (473)
Q Consensus 275 ~~~~pfd----~~~~G~~~geGaaavvL~~~~~A~~~g-~~~~a~i~g~~~~~d~~~~~---------------~~~--- 331 (473)
..|+| ....++++||||+|+||++.+.. + .....++.+.+....+.... ...
T Consensus 195 --~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~ 269 (387)
T 3a5r_A 195 --RGPSETHLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPT 269 (387)
T ss_dssp --CCCCSSCCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHH
T ss_pred --cCCCccchhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHH
Confidence 11232 23357899999999999875431 1 11112444443321111000 000
Q ss_pred CChHHHHHHHHHHHHHcCCC-CCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHH
Q 011989 332 IDGKGAILAMTRALKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVE 409 (473)
Q Consensus 332 ~~~~~~~~a~~~al~~agl~-~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~ 409 (473)
.....+..+++++|+++|++ .+|| ++.+|..+.... .++.+.++... .++..+ .+...+||+.+|+-.+.
T Consensus 270 ~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~-----~~~~~~lgl~~--ek~~~s~~~l~~~GNtssAsi~~~ 341 (387)
T 3a5r_A 270 LISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAIL-----DQVTAKVGLEK--EKLKVTRQVLKDYGNMSSATVFFI 341 (387)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHH-----HHHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHHH-----HHHHHHcCCCh--HHhHHHHHHHHhcCCcchhHHHHH
Confidence 01233556889999999998 8899 899996654432 23444454321 123332 34578999999998887
Q ss_pred HHHHHHHH-HhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 410 AIFAVLAI-HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 410 li~~~~~l-~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
|..++..= +.|.+.| ......++..+||.|-+..+++|+.
T Consensus 342 L~~~~~~g~~~G~~~~----------------------G~~~d~vll~~fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 342 MDEMRKKSLENGQATT----------------------GEGLEWGVLFGFGPGITVETVVLRS 382 (387)
T ss_dssp HHHHHHHHHHTTCSBT----------------------TTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHhccccCCCCC----------------------CCCcceEEEEEecCcceeeehhhee
Confidence 77665442 1111000 0012567777999988888888874
No 65
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.76 E-value=7.5e-18 Score=167.03 Aligned_cols=242 Identities=12% Similarity=0.088 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+.+|+++||+++|+++++++ .|++++..+.. ..+..+.+++..+|
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~lG 114 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID-----ALIFVSQTPNY--------------------------RLPATAFVLQAELD 114 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC--------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCcHHHHHHHHcC
Confidence 578999999999999999988887 88888765321 12345678999999
Q ss_pred CC--CCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCCc
Q 011989 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (473)
Q Consensus 209 l~--Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~G 286 (473)
++ .+.+.+..+|+|++.||..|.++|++|.++.|||+++|.++.... ++.....
T Consensus 115 l~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------------~~d~~~~ 170 (354)
T 4efi_A 115 LPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMID------------------------PTDRSTS 170 (354)
T ss_dssp CCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGCC------------------------TTCHHHH
T ss_pred cCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccCC------------------------ccccccc
Confidence 93 589999999999999999999999999999999999998533210 1111235
Q ss_pred eeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC-----C----CCC-----------------CCCh------
Q 011989 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----I----TQP-----------------HIDG------ 334 (473)
Q Consensus 287 ~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-----~----~~~-----------------~~~~------ 334 (473)
.++||||+|+||++.+.. .++ .+...+++.. . ..| ...+
T Consensus 171 ~lfGDGA~A~vl~~~~~~-----~~~----~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~ 241 (354)
T 4efi_A 171 LLFGDAGTMTALETSNGD-----AAA----HFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNF 241 (354)
T ss_dssp TTBCCEEEEEEEEECCSC-----CEE----EEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHH
T ss_pred cccccceeEEEEeecCCC-----Cce----EEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHH
Confidence 679999999999875421 111 2222222210 0 001 0011
Q ss_pred --HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHH
Q 011989 335 --KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 412 (473)
Q Consensus 335 --~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~ 412 (473)
....++++++|+++|++++|||++.+|-.+.+ + ..++.+.++... .++. ..-..+||+.+|+=.+.|..
T Consensus 242 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~----i-~~~~~~~Lgl~~--ek~~--~~l~~~GNt~sasi~~~L~~ 312 (354)
T 4efi_A 242 TLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLF----M-LKHLAKKAGLPA--ERVP--VNIGEYGNTSCASIPLLITT 312 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH----H-HHHHHHHTTCCG--GGSC--CCHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH----H-HHHHHHHhCcCH--HHHH--HHHhhhCcHHHHHHHHHHHH
Confidence 23446788999999999999999999954433 2 334445454322 1222 22367899999987766655
Q ss_pred HHHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 413 AVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 413 ~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
++. .+.+. +-..++..+||.|-+..+++|+-
T Consensus 313 ~~~---~g~~~-------------------------~Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 313 ELK---DRLKE-------------------------ETLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp HSH---HHHHH-------------------------SCEEEEEEEEETTTEEEEEEEEE
T ss_pred HHH---hCCCC-------------------------CCCEEEEEEEchhhhheeeEEEE
Confidence 433 22211 12456777999999999998874
No 66
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=99.75 E-value=6.3e-18 Score=167.65 Aligned_cols=246 Identities=20% Similarity=0.230 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+.+|+++||+++|+++++++ .|++++++++ +..+..+..|...||
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~~dId-----~li~~t~t~~--------------------------~~~P~~a~~v~~~LG 110 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQGSDLD-----AVIVSTVTFP--------------------------HATPSAAALVAHEIG 110 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCS-----EEEEECSCCS--------------------------CSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC--------------------------CCCCchHHHHHHHhC
Confidence 567999999999999999988887 7888876532 122456778999999
Q ss_pred CCC-CeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCCce
Q 011989 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (473)
Q Consensus 209 l~G-p~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~G~ 287 (473)
++. +++.+..+|++++.||..|..+|++|..+.+||+++|.++... . +......+
T Consensus 111 l~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~~-----------------------d-~~~~~~~~ 166 (350)
T 4ewp_A 111 ATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDVV-----------------------D-PTDRSISF 166 (350)
T ss_dssp CTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------------------C-TTCTTTGG
T ss_pred CCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceecc-----------------------c-cccccccc
Confidence 976 7889999999999999999999999999999999999743211 0 11234567
Q ss_pred eeccceEEEEEccchHHHhcCCeEEEEEEEEE--------Ee----------------cCCCCCC------CC--CCCh-
Q 011989 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG--------MS----------------GDAHHIT------QP--HIDG- 334 (473)
Q Consensus 288 ~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~--------~~----------------~d~~~~~------~~--~~~~- 334 (473)
++||||+|+||+..+.. + +.....+.. .. .+..... .+ ...+
T Consensus 167 lfgDGA~A~vl~~~~~~---~--~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 241 (350)
T 4ewp_A 167 LLGDGAGAVIVAASDEP---G--ISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGP 241 (350)
T ss_dssp GBCEEEEEEEEEEESSC---C--BCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHH
T ss_pred ccccchheeeeecccCC---C--ccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhH
Confidence 89999999999865421 1 111111110 00 0000000 00 0111
Q ss_pred -------HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHH
Q 011989 335 -------KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 407 (473)
Q Consensus 335 -------~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~ 407 (473)
....++++++|+++|++++|||++.+|-.+.. + ..++.+.++... .. .+...-..+||+.+|+=.
T Consensus 242 ~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~----i-~~~~~~~Lgl~~--~~-~~~~~l~~~GNtssasi~ 313 (350)
T 4ewp_A 242 SVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMR----I-IDEFAKQLKLPE--SV-VVARDIADAGNTSAASIP 313 (350)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHH----H-HHHHHHHTTCCT--TS-EECCTHHHHCBCGGGHHH
T ss_pred HHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHH----H-HHHHHHHcCcCh--Hh-EEecccccccchHHHHHH
Confidence 12346889999999999999999999944332 2 233444444321 11 122223467999988866
Q ss_pred HHHHHHHHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEe
Q 011989 408 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 470 (473)
Q Consensus 408 ~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~ 470 (473)
+.|.. .++.+.+. +-..++..+||-|=+..++||+
T Consensus 314 ~~L~~---~~~~g~~~-------------------------~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 314 LAMHR---LLEENPEL-------------------------SGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp HHHHH---HHHHCGGG-------------------------TTSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHH---HHHhCCCC-------------------------CcCEEEEEEEchhhEeEEEEEE
Confidence 55443 34444321 2235666688876677777776
No 67
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.74 E-value=2.2e-17 Score=165.86 Aligned_cols=267 Identities=12% Similarity=0.055 Sum_probs=174.6
Q ss_pred CchhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhH
Q 011989 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (473)
Q Consensus 119 ~~~~~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (473)
..+..........|+.+|+++||+++|+++++++ .|++++..+ . ..+.
T Consensus 92 ~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id-----~li~~t~~~----------------------~-----~~p~ 139 (389)
T 1i88_A 92 DARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKIT-----HLIVCTTSG----------------------V-----DMPG 139 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC----------------------C-----CSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEECCC----------------------C-----CCch
Confidence 3344444567789999999999999999888887 788887542 0 1224
Q ss_pred HHHHHHHhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCC
Q 011989 199 ASGHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (473)
Q Consensus 199 ~a~~ia~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (473)
.+.+++..||+++. .+.+..+|+|++.||..|.++|++|.++.|||+|+|.++..+
T Consensus 140 ~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~i~~g~~~~vLvvg~E~~s~~~--------------------- 198 (389)
T 1i88_A 140 ADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTF--------------------- 198 (389)
T ss_dssp HHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTC---------------------
T ss_pred HHHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEecccHhH---------------------
Confidence 57789999999874 788999999999999999999999999999999999743211
Q ss_pred CCcCccC----CCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCC--------------CC-CCC---CC
Q 011989 276 ASRPFDC----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH--------------IT-QPH---ID 333 (473)
Q Consensus 276 ~~~pfd~----~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~--------------~~-~~~---~~ 333 (473)
..|+|. ...++++||||+|+||++.+.. . -.....++.+.+....+.. .. ... ..
T Consensus 199 -~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~-~-~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~ 275 (389)
T 1i88_A 199 -RGPSDTHLDSLVGQALFGDGAAALIVGSDPVP-E-IEKPIFEMVWTAQTIAPDSEGAIDVHLREAGLTFHLLKDVPGIV 275 (389)
T ss_dssp -CCCCTTCHHHHHHHHHBCCEEEEEEEESSCCT-T-TSCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECSCHHHHH
T ss_pred -cCccccccccccccceEecceEEEEEecCCCC-c-cCCCceEEEeeeeEEcCCCcccceeEEecCceEEEeccHHHHHH
Confidence 112332 1247899999999999875431 1 0111123443332211100 00 000 01
Q ss_pred hHHHHHHHHHHHHHcCCC-CCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHH
Q 011989 334 GKGAILAMTRALKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAI 411 (473)
Q Consensus 334 ~~~~~~a~~~al~~agl~-~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li 411 (473)
...+..+++++|+++|++ .+|| ++.+|..+....| ++.+.++... .++..+ .+...+||+.+|+-.+.|-
T Consensus 276 ~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~-----~~~~~lgl~~--ek~~~~~~~l~~~GNtssAsi~~~L~ 347 (389)
T 1i88_A 276 SKNITKALVEAFEPLGISDYNSI-FWIAHPGGPAILD-----QVEQKLALKP--EKMNATREVLSEYGNMSSACVLFILD 347 (389)
T ss_dssp HHHHHHHHHHHHGGGTCCCTTSS-EEEECCSCHHHHH-----HHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCchhhc-eEEECCCcHHHHH-----HHHHHcCCCH--HHHHHHHHHHHHhCCchhhHHHHHHH
Confidence 234557888999999998 8888 8999966554433 3444454322 133332 3457899999999887776
Q ss_pred HHHHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCC-CCcEEEEeccccccceeeEEEee
Q 011989 412 FAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM-PISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 412 ~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
.++..=++ | ..+... ....++..+||.|-+..+++|+.
T Consensus 348 ~~~~~g~~---~-------------------G~~~~g~~~d~vll~~fG~G~t~~~~ll~~ 386 (389)
T 1i88_A 348 EMRKKSTQ---N-------------------GLKTTGEGLEWGVLFGFGPGLTIETVVLRS 386 (389)
T ss_dssp HHHHHHHH---T-------------------TCSBTTTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHhccc---c-------------------CCcccCCCCceEEEEEecCccEEEEEEEEe
Confidence 66543210 0 000000 12567777999888888888875
No 68
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.74 E-value=2e-17 Score=165.99 Aligned_cols=265 Identities=15% Similarity=0.105 Sum_probs=170.0
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHH
Q 011989 125 SIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 204 (473)
Q Consensus 125 ~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 204 (473)
..+....|+.+|+++||+++|+++++++ .|+++++.+ ...+..+.+|+
T Consensus 98 ~~~~~~~La~~Aa~~aL~~ag~~~~dId-----~vi~~t~t~---------------------------~~~p~~a~~v~ 145 (393)
T 3ov2_A 98 VVEEIPRLAKEAAEKAIKEWGRPKSEIT-----HLVFCSISG---------------------------IDMPGADYRLA 145 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCGGGCC-----EEEEEESSC---------------------------CCBSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC---------------------------CCCCCHHHHHH
Confidence 3446789999999999999999988887 888888542 11234677899
Q ss_pred HhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCcc
Q 011989 205 MKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 281 (473)
Q Consensus 205 ~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd 281 (473)
..||+++. ++.+..+|++++.||..|.++|++|.++.|||+|+|.++..+. . +.. +.++
T Consensus 146 ~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~----------~------~~d--~~~~ 207 (393)
T 3ov2_A 146 TLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSFR----------G------PNE--GDFE 207 (393)
T ss_dssp HHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTCC----------C------CCT--TCHH
T ss_pred HHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhcc----------C------Ccc--cchh
Confidence 99999874 6899999999999999999999999999999999998532110 0 000 0011
Q ss_pred CCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEec--CCCC------------CCCCCCCh-----HHHHHHHH
Q 011989 282 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG--DAHH------------ITQPHIDG-----KGAILAMT 342 (473)
Q Consensus 282 ~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~--d~~~------------~~~~~~~~-----~~~~~a~~ 342 (473)
.....+++||||+|+||++.+... .....+ ++...+... +... ... +... ..+..+++
T Consensus 208 ~~~~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~ 284 (393)
T 3ov2_A 208 ALAGQAGFGDGAGAVVVGADPLEG-IEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYF-LNQLPAIIADNLGRSLE 284 (393)
T ss_dssp HHHHHHHBCCEEEEEEEESSCCTT-TCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHTTSHHHHH
T ss_pred hhcccccccCccEEEEEEecCCCc-ccCcee-EEEecCcEEecCCcccCceeeeCCceEEEE-CcHHHHHHHHHHHHHHH
Confidence 112467799999999998754321 011122 232222111 1000 000 0111 11346889
Q ss_pred HHHHHcCCCC-CCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHHHHHHH-HHh
Q 011989 343 RALKQSGLQS-HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLA-IHH 419 (473)
Q Consensus 343 ~al~~agl~~-~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~-l~~ 419 (473)
++|+++|+++ +|| ++.+|- .|-.+ ..++.+.++... .+++.+ .+-..+||+.+|+=.+.|-.++.. ++.
T Consensus 285 ~~L~~~gl~~~~di-~~v~Hq----~n~~i-~~~v~~~Lgl~~--ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~ 356 (393)
T 3ov2_A 285 RALAPLGVREWNDV-FWVAHP----GNWAI-IDAIEAKLQLSP--DKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVE 356 (393)
T ss_dssp HHHGGGTCCSGGGS-EEEECC----CCHHH-HHHHHHHHTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCcccCc-EEEECC----CChHH-HHHHHHHcCCCH--HHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhc
Confidence 9999999997 888 899993 33333 344555555432 223321 234578999999877766655543 222
Q ss_pred CccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 420 GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 420 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
|.+.| ..+...++..+||-|-+..+++|++.
T Consensus 357 g~~~~----------------------G~~~d~vll~~fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 357 GRSTT----------------------GDGLQWGVLLGFGPGLSIETVVLRSM 387 (393)
T ss_dssp TCSBT----------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCcCC----------------------CCCCCeEEEEEECccceeeeeeeEEc
Confidence 33211 01125677779999999999999864
No 69
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.73 E-value=3.6e-17 Score=164.84 Aligned_cols=264 Identities=13% Similarity=0.058 Sum_probs=172.2
Q ss_pred hhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHH
Q 011989 123 HRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH 202 (473)
Q Consensus 123 ~~~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 202 (473)
.........|+.+|+++||+++|+++++++ .|+++++.+. ..+..+.+
T Consensus 109 ~~~~~~~~~La~~Aa~~aL~~agl~~~~Id-----~vi~~t~~~~---------------------------~~p~~a~~ 156 (402)
T 3awk_A 109 DIAVLEVPKLAKEAAISAIKQWGQPKSKIT-----HLVFATTSGV---------------------------DMPGADFQ 156 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEECSCC---------------------------CSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCCC---------------------------cCChHHHH
Confidence 333456789999999999999999888776 7888875421 12235678
Q ss_pred HHHhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcC
Q 011989 203 VSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRP 279 (473)
Q Consensus 203 ia~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 279 (473)
|+..||+++. .+.+..+|+|++.||..|.++|++|.++.|||+|+|.++... ..|
T Consensus 157 v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~----------------------~~~ 214 (402)
T 3awk_A 157 LAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDLAENNKGARVLVACSEVTAVTF----------------------RAP 214 (402)
T ss_dssp HHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC----------------------CCC
T ss_pred HHHHcCCCCccceeeEECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhh----------------------cCC
Confidence 9999999874 788999999999999999999999999999999999743211 122
Q ss_pred ccCC----CCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCC--C-C-----------C-CCC---CChHHH
Q 011989 280 FDCG----RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--H-I-----------T-QPH---IDGKGA 337 (473)
Q Consensus 280 fd~~----~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~-~-----------~-~~~---~~~~~~ 337 (473)
+|.+ ..++++||||+|+||++.+.. . -.....++.+.+....+. + . . .+. .....+
T Consensus 215 ~d~~~~~~~~~~lfGDGA~A~vl~~~~~~-~-~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~ 292 (402)
T 3awk_A 215 SETHLDGLVGSALFGDGAAALIVGSDPVP-Q-EEKPLFEIHWAGEAVLPDSDGAINGHLREAGLIFHLLKDVPGLISKNI 292 (402)
T ss_dssp CTTCHHHHHHHHHBCCEEEEEEEESSCCT-T-TCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHH
T ss_pred CccCHHHhhccccccCceEEEEEecCCCc-c-ccCCceEEEeeeEEeeCCCchhcceEEecCceEEEeCchHHHHHHHHH
Confidence 3322 237899999999999875431 1 011112444433221110 0 0 0 000 011334
Q ss_pred HHHHHHHHHHcCCC-CCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHHHHHH
Q 011989 338 ILAMTRALKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 338 ~~a~~~al~~agl~-~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
..+++++|+++|++ .+|| ++.+|..+.... .++.+.++... .++..+ .+-..+||+.+|+-.+.|-.++.
T Consensus 293 ~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~-----~~~~~~lgl~~--ek~~~s~~~l~~~GNtssAsi~~~L~~~~~ 364 (402)
T 3awk_A 293 DKVLAEPLEYVHFPSYNDM-FWAVHPGGPAIL-----DQIEAKLGLST--DKMQASRDVLASYGNMSSASVLFVLDQIRK 364 (402)
T ss_dssp HHHTHHHHHHTTCCCGGGE-EEEECCSCHHHH-----HHHHHHTTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCccce-eEEECCCcHHHH-----HHHHHHcCCCH--HHHHHHHHHHHHcCCchhhHHHHHHHHHHh
Confidence 56788999999998 7888 899996554432 23444444322 233332 34567899999998877766654
Q ss_pred HHHhCccCCCCCCCCCCCCCCCCCCccccCCCC-CCcEEEEeccccccceeeEEEeec
Q 011989 416 AIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM-PISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 416 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
.-++ | ..+... ....++..+||.|-+..+++|+..
T Consensus 365 ~g~~---~-------------------G~~~~g~g~d~vll~~fG~G~t~~~~ll~~~ 400 (402)
T 3awk_A 365 NSEE---L-------------------HLPTTGEGFEWGFVIGFGPGLTVETLLLRSI 400 (402)
T ss_dssp HHHH---T-------------------TCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred hccc---c-------------------CCCcCCCCcceEEEEEecccceeeeheeeec
Confidence 3211 0 000001 125677779999888889998864
No 70
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=99.72 E-value=9.4e-17 Score=163.89 Aligned_cols=181 Identities=14% Similarity=0.126 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+++|+++||+++|+++++++ .|++++..+. ...+..+..|+..||
T Consensus 52 ~~~La~~Aa~~aL~~agi~~~~Id-----~li~~t~t~~--------------------------~~~p~~a~~v~~~lg 100 (450)
T 2f82_A 52 VISMSFNAVTSLLEKYKIDPKQIG-----RLEVGSETVI--------------------------DKSKSIKTFLMQLFE 100 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECCCCS--------------------------CSSSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHcCcCHHHCC-----EEEEEecCCC--------------------------CCCCcHHHHHHHHhC
Confidence 578999999999999999776665 6667775421 112345678888888
Q ss_pred C---C-CCeeeecCCcchHHHHHHHHHHHHHcCCC--CEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccC
Q 011989 209 F---Q-GPNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282 (473)
Q Consensus 209 l---~-Gp~~~v~~acasg~~Al~~A~~~I~~G~~--d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~ 282 (473)
+ + .+++.+..+|+|++.||..|.++|++|.+ +.|||+|+|.+. ++.
T Consensus 101 l~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~----------------------------~~~ 152 (450)
T 2f82_A 101 KCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV----------------------------YAE 152 (450)
T ss_dssp TTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC----------------------------CSS
T ss_pred CcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc----------------------------ccC
Confidence 8 3 48899999999999999999999999998 999999999742 111
Q ss_pred CCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCC-------CCCCChH--------HHHHHHHHHHH-
Q 011989 283 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHIT-------QPHIDGK--------GAILAMTRALK- 346 (473)
Q Consensus 283 ~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~-------~~~~~~~--------~~~~a~~~al~- 346 (473)
.....++||||+|+||++.+. . .+.....|.... +-.+.. .|...+. .+..+++++++
T Consensus 153 ~~~~~~fGDGA~A~ll~~~~~----~-~~~~~~~g~~~~-~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~ 226 (450)
T 2f82_A 153 GPARPTGGAAAIAMLIGPDAP----I-VFESKLRGSHMA-HVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNK 226 (450)
T ss_dssp STTGGGCEEEEEEEEEESSCS----E-EEEEEEEEEEEC-CCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccceEEEEeccCCc----e-EEEeccceeehh-hccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHH
Confidence 235678999999999986542 1 121122333222 111111 1222222 24467778886
Q ss_pred -----HcCCCCCCccEEEEcCCCCCCCCHHHHH
Q 011989 347 -----QSGLQSHQVDYVNAHATSTPLGDTVEAT 374 (473)
Q Consensus 347 -----~agl~~~dId~v~~hgtgt~~~D~~E~~ 374 (473)
++|++++|||++.+|..+++..+.+...
T Consensus 227 ~~~~~~agl~~~did~~v~Hq~~~~i~~~~~~~ 259 (450)
T 2f82_A 227 FEKLEGKEFSINDADYFVFHSPYNKLVQKSFAR 259 (450)
T ss_dssp HHHHHSSCCCGGGCSEEEECCSSHHHHHHHHHH
T ss_pred hhhccccCCChhhcCEEEecCChHHHHHHHHHH
Confidence 8999999999999999888876665443
No 71
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.68 E-value=3.2e-16 Score=156.88 Aligned_cols=263 Identities=13% Similarity=0.101 Sum_probs=161.3
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHH
Q 011989 125 SIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 204 (473)
Q Consensus 125 ~~~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 204 (473)
.++....|+.+|+++||++||+++++++ .|+++++.+ + ..+..+.+|+
T Consensus 92 ~~~~~~~La~~Aa~~AL~~ag~~~~dId-----~li~~t~t~----------------------~-----~~p~~a~~v~ 139 (387)
T 3oit_A 92 AADAVPELAAEAAKKAIAEWGRPAADIT-----HLVVTTNSG----------------------A-----HVPGVDFRLV 139 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCGGGCC-----EEEEEESSC----------------------C-----EESCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCC----------------------C-----CcccHHHHHH
Confidence 3346789999999999999999988887 888887542 1 1234677899
Q ss_pred HhcCCCCC---eeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCcc
Q 011989 205 MKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 281 (473)
Q Consensus 205 ~~lgl~Gp---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd 281 (473)
..||+++. .+.+..+|++++.||..|.++|++|.++.|||+|+|.++..+. . ++. +.++
T Consensus 140 ~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~----------~------~~d--~~~~ 201 (387)
T 3oit_A 140 PLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYFT----------G------PDE--GCFR 201 (387)
T ss_dssp HHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGTCC----------C------CCS--SSCH
T ss_pred HHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchhcc----------C------ccc--cchH
Confidence 99999873 6899999999999999999999999999999999998531110 0 000 0011
Q ss_pred CCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCC--C------------CC-CCCC---ChHHHHHHHHH
Q 011989 282 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--H------------IT-QPHI---DGKGAILAMTR 343 (473)
Q Consensus 282 ~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~------------~~-~~~~---~~~~~~~a~~~ 343 (473)
.....+++||||+|+||+..+. .......++.+.+....+. . .. .... ....+..++++
T Consensus 202 ~~~~~~lFGDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~ 278 (387)
T 3oit_A 202 TLLVQGLFGDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLD 278 (387)
T ss_dssp HHHHHHHBCCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHH
T ss_pred hhhcccccccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHH
Confidence 1123678999999999987541 1111223444433221110 0 00 0110 01334567888
Q ss_pred HHHHc----CCCCCCcc--EEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHHHHHHH
Q 011989 344 ALKQS----GLQSHQVD--YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLA 416 (473)
Q Consensus 344 al~~a----gl~~~dId--~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~ 416 (473)
+|+++ |++ |+| ++.+|-.+.. + ..++.+.++... .++..+ .+-..+||+.+|+=.+.|-.+
T Consensus 279 ~L~~~~~~~gl~--d~d~~~~v~Hq~n~~----i-l~~v~~~Lgl~~--ek~~~s~~~l~~~GNtssAsip~~L~~~--- 346 (387)
T 3oit_A 279 MFGPLLGGDGGG--GWNDLFWAVHPGSST----I-MDQVDAALGLEP--GKLAASRRVLSDYGNMSGATVIFALDEL--- 346 (387)
T ss_dssp HTGGGCC--------GGGSEEEECCCCHH----H-HHHHHHHHTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHhhcccCCCC--cccccEEEECCCCHH----H-HHHHHHHcCCCH--HHHHHHHHHHHHhCchHHhHHHHHHHHH---
Confidence 88898 987 666 9999943332 2 334444455332 123322 234568999988866655442
Q ss_pred HHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEeec
Q 011989 417 IHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 472 (473)
Q Consensus 417 l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~~ 472 (473)
+++.+.+ .. ...+...++..+||-|-+..++||++.
T Consensus 347 -~~~~~~~------------------G~-~g~~~d~vll~~fG~G~t~~~~ll~~~ 382 (387)
T 3oit_A 347 -RRQRKEA------------------AA-AGEWPELGVMMAFGPGMTVDAMLLHAT 382 (387)
T ss_dssp -HHC-----------------------------CCEEEEEEEETTTEEEEEEEEEC
T ss_pred -HHhhhcc------------------CC-CCCCCCEEEEEEecccceeeeeeeEec
Confidence 2222211 00 001124677779999999999999874
No 72
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=99.67 E-value=2.1e-15 Score=153.39 Aligned_cols=263 Identities=12% Similarity=0.059 Sum_probs=161.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+.+|+++||++||+++++++ .||++++++. ..+..+.+|+..||
T Consensus 110 a~~La~~Aa~~AL~~agi~~~dId-----~li~~t~t~~---------------------------~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 110 GVPLAVEASRKAMAEARLVPAQIT-----HMVSTTCTDS---------------------------ANPGYDHYVAKELG 157 (465)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCC---------------------------CSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCCC---------------------------CCCcHHHHHHHHhC
Confidence 358999999999999999988887 8888875421 12345778999999
Q ss_pred CCC-C-eeee-cCCcchHHHHHHHHHHHHHc----CCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCcc
Q 011989 209 FQG-P-NHAA-VTACATGAHSIGDAARMIQF----GDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 281 (473)
Q Consensus 209 l~G-p-~~~v-~~acasg~~Al~~A~~~I~~----G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd 281 (473)
++. + .+.| ..+|++++.||..|.++|++ |.++.|||+++|.++...... ...... ..+
T Consensus 158 l~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~~~-~~~~~~--------------~~~ 222 (465)
T 3e1h_A 158 LSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRSE-LESIDA--------------LQE 222 (465)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHHH-HHHHHH--------------HTC
T ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcCcc-cccccc--------------ccc
Confidence 987 4 5888 79999999999999999997 999999999999865433221 100000 011
Q ss_pred CCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCC---------------CCCC---ChHHHHHHHHH
Q 011989 282 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHIT---------------QPHI---DGKGAILAMTR 343 (473)
Q Consensus 282 ~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~---------------~~~~---~~~~~~~a~~~ 343 (473)
.....+++||||+|+||+..+... .....+..+.++.....+.... .+.. ....+..++++
T Consensus 223 d~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~ 301 (465)
T 3e1h_A 223 TRIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYAD 301 (465)
T ss_dssp CCCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHH
T ss_pred ccccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHH
Confidence 233467899999999998754211 0011223455543322211100 0000 01334567888
Q ss_pred HHHH-------cCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHHHHHH
Q 011989 344 ALKQ-------SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 344 al~~-------agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
+|++ +|++++||||+ +|- .|-.+ ..++.+.++... .++..+ ..-..+||+.+|+=.+.|-.
T Consensus 302 ~L~~~g~~L~~agl~~~DId~~-~Hq----an~rI-l~~v~~~Lgl~~--ek~~~s~~~l~~yGNtsSASip~aL~~--- 370 (465)
T 3e1h_A 302 LLSSLQDQLPSSYQKPADFDWA-MHP----GGATI-LSGAESAMGLTP--EHMRASYDRYINHGNSSSATIFSVLNR--- 370 (465)
T ss_dssp HHHHHGGGSCTTSCSGGGSEEE-ECC----SSHHH-HHHHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHHHHH---
T ss_pred HHHhccccccccCCCHHHceEE-ecC----CChHH-HHHHHHHhCcCH--HHhHHHHHHHhcceechHhHHHHHHHH---
Confidence 8887 67999999998 993 33332 334444454322 112211 11124589888875544332
Q ss_pred HHHh--CccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 416 AIHH--GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 416 ~l~~--~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
.++. +.+.|. ......++..+||-|=+..++||+.
T Consensus 371 ~~~~~~g~l~~G---------------------g~~~d~vll~gfG~Glt~~~~llr~ 407 (465)
T 3e1h_A 371 LREKDMDALAPG---------------------GKVKEYVVGCAFGPGINVEMCMLKR 407 (465)
T ss_dssp HTSTTTTSCSSS---------------------SCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHhcccccCCC---------------------CCCCCEEEEEEEhHHHhhhheeeEE
Confidence 2232 222110 0122567777999888888888874
No 73
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=99.62 E-value=7.2e-16 Score=154.06 Aligned_cols=215 Identities=14% Similarity=0.106 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+.+|+++||+++| +++++ .|++++..+.. ..+..+..|+..||
T Consensus 56 ~~~La~~Aa~~aL~~a~--~~~Id-----~li~~t~t~~~--------------------------~~ps~a~~v~~~LG 102 (388)
T 3v4n_A 56 IVTFAANAAEAILTKED--KEAID-----MVIVGTESSID--------------------------ESKAAAVVLHRLMG 102 (388)
T ss_dssp HHHHHHHHHHTTCCHHH--HHHEE-----EEEEECSSCSB--------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCC--cccCC-----EEEEEeccCCC--------------------------cCccHHHHHHHHcC
Confidence 57899999999999997 55665 77888754321 12345778999999
Q ss_pred CCC--CeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCCc
Q 011989 209 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (473)
Q Consensus 209 l~G--p~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~G 286 (473)
+++ +++.+..+|++++.||..|..+|++|.++.|||+++|.+... ++ ..+.
T Consensus 103 l~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~--------------------------~~-~~~~ 155 (388)
T 3v4n_A 103 IQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYG--------------------------LN-SGGE 155 (388)
T ss_dssp CCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCC--------------------------TT-CTTG
T ss_pred CCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhccc--------------------------CC-CCCC
Confidence 975 788999999999999999999999999999999999974321 11 1225
Q ss_pred eeeccceEEEEEccchHHHhcCCeEEEE-EEEEEEecCCCCCCC------CCCCh--------HHHHHHHHHHHHHcCCC
Q 011989 287 FVIGEGSGVLVLEELEHAKKRGAKIYAE-VRGYGMSGDAHHITQ------PHIDG--------KGAILAMTRALKQSGLQ 351 (473)
Q Consensus 287 ~~~geGaaavvL~~~~~A~~~g~~~~a~-i~g~~~~~d~~~~~~------~~~~~--------~~~~~a~~~al~~agl~ 351 (473)
.++||||+|+||++.+ .+... ....+...+....-. +...+ ..+..+++++|+++|++
T Consensus 156 ~lfGDGA~A~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~ 228 (388)
T 3v4n_A 156 PTQGAGAVAMLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLD 228 (388)
T ss_dssp GGCEEEEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CccccceeEEEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7799999999998742 11111 011111112111001 11111 33556889999999999
Q ss_pred CCCccEEEEcCCCCCCCCHHHH-------HHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHH
Q 011989 352 SHQVDYVNAHATSTPLGDTVEA-------TAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 414 (473)
Q Consensus 352 ~~dId~v~~hgtgt~~~D~~E~-------~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~ 414 (473)
++|||++..|-..+...-+.-. ..+.+-++... . .+...-..+||+.+|+=.+.|..++
T Consensus 229 ~~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~--e--~~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 229 FADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARY--E--ESIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp GGGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHHHHH--H--HHTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhCCCH--H--HHhhHHHhcCchHHHHHHHHHHHHH
Confidence 9999999999432221100000 11222222110 0 1122445789999998766555443
No 74
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.62 E-value=2.2e-14 Score=144.04 Aligned_cols=242 Identities=17% Similarity=0.033 Sum_probs=158.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
.....|+.+|+++||+++|+++++++ .|+++++.+. ..+..+.+|+..
T Consensus 135 ~~~~~La~~Aa~~AL~~agi~~~dId-----~li~~t~t~~---------------------------~~P~~a~~v~~~ 182 (413)
T 3v7i_A 135 EAVQAYGERAARGALQIAGLDVADVD-----CLITSNSTTP---------------------------ALPGLDVALANR 182 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECCSSC---------------------------CSSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhCcCHHHCC-----EEEEEccCCC---------------------------CcCHHHHHHHHH
Confidence 35678999999999999999988887 8888886521 123456789999
Q ss_pred cCCCC--Ceeee-cCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCC
Q 011989 207 YGFQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283 (473)
Q Consensus 207 lgl~G--p~~~v-~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~ 283 (473)
+|+++ +.+.+ ..+|++++.||..|.++|++|.++.|||+|+|.++... . ++.+
T Consensus 183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-----------------------~-~~d~ 238 (413)
T 3v7i_A 183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-----------------------Q-PADD 238 (413)
T ss_dssp TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-----------------------C-SSCC
T ss_pred hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-----------------------C-cccc
Confidence 99986 35677 89999999999999999999999999999999853321 0 1111
Q ss_pred CC-----ceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCCC-------------CCCC----ChHHHHHHH
Q 011989 284 RD-----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHIT-------------QPHI----DGKGAILAM 341 (473)
Q Consensus 284 ~~-----G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~-------------~~~~----~~~~~~~a~ 341 (473)
.. ..++||||+|+||++.+.. ... .++.+......+.... ..+. .......++
T Consensus 239 ~~~~lv~~~LFGDGAaAvvl~~~~~~----~~~-~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i 313 (413)
T 3v7i_A 239 TLESLIVRLLFADTAVAAVVTGRPRP----ESV-LRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAM 313 (413)
T ss_dssp STTHHHHHHHBCCEEEEEEEESSCCT----TEE-EEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHH
T ss_pred chhhhhcceeeccccEEEEEEecCCC----CCC-EEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHH
Confidence 22 5679999999999875421 111 2444443221111000 0000 012245678
Q ss_pred HHHHH------HcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhh--cccCCCCce--eeccccchhhhHHhHHHHHHH
Q 011989 342 TRALK------QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS--DHATSGSLA--FSSTKGAIGHLLGAAGAVEAI 411 (473)
Q Consensus 342 ~~al~------~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~--~~~~~~~~~--v~s~k~~~Gh~~~AsG~~~li 411 (473)
+++|+ ++|++ ||++.+|-.+. .+ ..++.+.++ ... .++. .... . +||+.+|+=.+.|-
T Consensus 314 ~~~L~~~~~~~~~gl~---id~~v~Hq~~~----~i-l~~v~~~Lg~~l~~--ek~~~s~~~l-~-~GNtssAsi~~~L~ 381 (413)
T 3v7i_A 314 WEWLRVRYEDDPSSWH---PDVLLAHPGGT----RV-LEYMEQTMPDEWPS--GLLSYSRDSY-T-SGNRGGAAVFDILR 381 (413)
T ss_dssp HHHHHHHTSSSCTTCC---CCEEEEECSSH----HH-HHHHHHHSCSSCCS--CSTHHHHHHH-T-TCBCGGGHHHHHHH
T ss_pred HHHHhhccccccCCCc---eeEEEECCCCh----HH-HHHHHHHhCCCCCH--HHhhccceEe-c-eeChHHHHHHHHHH
Confidence 88999 89987 99999994433 22 344455555 321 2221 2333 4 89999998666555
Q ss_pred HHHHHHHhCccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEe
Q 011989 412 FAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 470 (473)
Q Consensus 412 ~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~ 470 (473)
.++ +. .+. +-..++..+||-|=+..+++|+
T Consensus 382 ~~~---~~-~~~-------------------------~Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 382 RAH---DA-GQK-------------------------TGSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp HHH---HH-CCC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred HHH---hC-CCC-------------------------CCCEEEEEEECHHHhHhhhheE
Confidence 443 22 211 1245666789987777777775
No 75
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.62 E-value=4e-15 Score=148.55 Aligned_cols=265 Identities=12% Similarity=0.045 Sum_probs=163.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHh
Q 011989 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (473)
Q Consensus 127 ~~~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 206 (473)
.....|+.+|+++||++||+++++++ .|+++++++. ..+..+.+|+..
T Consensus 79 ~~~~~La~~Aa~~aL~~ag~~~~dId-----~li~~t~t~~---------------------------~~p~~a~~v~~~ 126 (379)
T 3euo_A 79 SDGVPLAVEASRKAMAEARLVPAQIT-----HMVSTTCTDS---------------------------ANPGYDHYVAKE 126 (379)
T ss_dssp HHTHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCC---------------------------CSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCC---------------------------CCCCHHHHHHHH
Confidence 34568999999999999999988887 8888886421 123456789999
Q ss_pred cCCCC-C-eeee-cCCcchHHHHHHHHHHHHHc----CCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcC
Q 011989 207 YGFQG-P-NHAA-VTACATGAHSIGDAARMIQF----GDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRP 279 (473)
Q Consensus 207 lgl~G-p-~~~v-~~acasg~~Al~~A~~~I~~----G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 279 (473)
||+++ + .+.| ..+|++++.||..|.++|++ |.++.|||+++|.++....+. ...... .
T Consensus 127 LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~a~~~~G~~~~vLvv~~E~~s~~~~~~-~~~~~~--------------~ 191 (379)
T 3euo_A 127 LGLSDRLEKVLLHGIGASGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRSE-LESIDA--------------L 191 (379)
T ss_dssp HTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHHH-HHHHHH--------------H
T ss_pred cCCCCCeeEEEeeCchhhHHHHHHHHHHHHHHhccccCCCCEEEEEEEEeehhhhcCc-cccccc--------------c
Confidence 99987 4 5888 79999999999999999997 999999999999854433221 100000 0
Q ss_pred ccCCCCceeeccceEEEEEccchHHHhcCCeEEEEEEEEEEecCCCCC---------------CCCCC---ChHHHHHHH
Q 011989 280 FDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHI---------------TQPHI---DGKGAILAM 341 (473)
Q Consensus 280 fd~~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~---------------~~~~~---~~~~~~~a~ 341 (473)
.+......++||||+|+||+..+... ........+.++.....+... ..+.. ....+..++
T Consensus 192 ~~d~~~~~LFGDGAaAvvl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 270 (379)
T 3euo_A 192 QETRIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTY 270 (379)
T ss_dssp CCCCCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCGGGEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred HHHhhcceeecCccEEEEEecCCCCc-cccccceeeeceeEEEecCchhhcCceecCCCcEEEeChHHHHHHHHHHHHHH
Confidence 11223467899999999999754311 011122344444322111100 00110 113355678
Q ss_pred HHHHHH-------cCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceee-ccccchhhhHHhHHHHHHHHH
Q 011989 342 TRALKQ-------SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 342 ~~al~~-------agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~li~~ 413 (473)
+++|++ +|++++||||+ +|- .|-.+ ..++.+.++... .++..+ .+-..+||+.+|+=.+.|-.+
T Consensus 271 ~~~L~~~~~~l~~~gl~~~did~~-~Hq----~n~~i-l~~v~~~Lgl~~--ek~~~s~~~l~~~GNtssAsi~~~L~~~ 342 (379)
T 3euo_A 271 ADLLSSLQDQLPSSYQKPADFDWA-MHP----GGATI-LSGAESAMGLTP--EHMRASYDRYINHGNSSSATIFSVLNRL 342 (379)
T ss_dssp HHHHHHHGGGSCTTSCSGGGSEEE-ECC----SSHHH-HHHHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHhcCcccccccCChhHeeEE-eCC----CChHH-HHHHHHHhCCCH--HHHHHHHHHHHhcCccHHHHHHHHHHHH
Confidence 888886 58999999988 993 33222 333444454332 122221 111356999888765544433
Q ss_pred HHHHHhC--ccCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeEEEee
Q 011989 414 VLAIHHG--VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 471 (473)
Q Consensus 414 ~~~l~~~--~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~~~~~vl~~ 471 (473)
. +.+ .+.| . ......++..+||-|=+..++||+.
T Consensus 343 ~---~~g~~~l~~------------------G---g~~~d~vll~~fG~G~t~~~~ll~~ 378 (379)
T 3euo_A 343 R---EKDMDALAP------------------G---GKVKEYVVGCAFGPGINVEMCMLKR 378 (379)
T ss_dssp T---SHHHHTTCG------------------G---GCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred H---hhcccccCC------------------C---CCCCCeEEEEEECcccEeEEEEEEe
Confidence 2 222 2111 0 0112567777899887888888874
No 76
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=99.62 E-value=4.6e-16 Score=156.66 Aligned_cols=211 Identities=11% Similarity=0.043 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+++|+++||+++| +++++ .|++++..+. ...+..+..|+..||
T Consensus 85 ~~~La~~Aa~~aL~~ag--~~dId-----~li~~t~t~~--------------------------~~~ps~a~~v~~~LG 131 (425)
T 3sqz_A 85 VVTLAAGSANEILTAED--KEKID-----MVILATESSV--------------------------DQSKAGAVYVHSLLG 131 (425)
T ss_dssp HHHHHHHHHHTTCCHHH--HHHEE-----EEEEECSCCS--------------------------CSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCC--hhhCC-----EEEEEecccc--------------------------cccchHHHHHHHHhC
Confidence 57899999999999997 56665 7788875432 112345678999999
Q ss_pred CCC--CeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCCc
Q 011989 209 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (473)
Q Consensus 209 l~G--p~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~G 286 (473)
+++ +++.+..+|++++.||..|..+|++|.++.|||+++|.+.... + ..+.
T Consensus 132 l~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvgae~~s~~~--------------------------~-~~~~ 184 (425)
T 3sqz_A 132 IQPFARSFEMKEAAYSATAALNYAKLHVEKHPDTRVLVLASDIAKYGI--------------------------G-TPGE 184 (425)
T ss_dssp CCSSCEEEEECCC-CHHHHHHHHHHHHHHHSTTCEEEEEEEEEECCCT--------------------------T-SGGG
T ss_pred CCCCeeEEEEcCHhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhcccC--------------------------C-CCCC
Confidence 985 7888999999999999999999999999999999999743211 1 0125
Q ss_pred eeeccceEEEEEccchHHHhcCCeEEEEEE-EEEEecCCCCCCC------CCCCh--------HHHHHHHHHHHHHcCCC
Q 011989 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVR-GYGMSGDAHHITQ------PHIDG--------KGAILAMTRALKQSGLQ 351 (473)
Q Consensus 287 ~~~geGaaavvL~~~~~A~~~g~~~~a~i~-g~~~~~d~~~~~~------~~~~~--------~~~~~a~~~al~~agl~ 351 (473)
.++||||+|+||++.+ .+..... ..+...+....-. +...+ ..+..+++++|+++|++
T Consensus 185 ~lfGDGA~A~ll~~~~-------~il~~~~~s~~~~~d~~df~~p~~~~~~~~dG~~~~~~~~~~l~~~~~~~l~~~gl~ 257 (425)
T 3sqz_A 185 STQGAGSIAMLVKKDP-------RILILHDETLAQTRDIMDFWRPNYTTTPYVNGMYSTKQYLDMLKTTWAEYQKRFDVS 257 (425)
T ss_dssp GGCEEEEEEEEEEESC-------SSEEECSCCEEEECCCCSEECCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcccceeeEEEeecCC-------ceEEEEeecccchhhcccccccCCCcceeeccHhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7799999999998742 1211111 1112222111001 11122 23456889999999999
Q ss_pred CCCccEEEEcCCCCCCCCHHHHHHHHHHh------------hcccCCCCceeeccccchhhhHHhHHHHHHHHHH
Q 011989 352 SHQVDYVNAHATSTPLGDTVEATAIRTVF------------SDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 414 (473)
Q Consensus 352 ~~dId~v~~hgtgt~~~D~~E~~a~~~~~------------~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~ 414 (473)
++|||++..|-..++. -..+..+++ +... -.+...-..+||+.+|+=.+.|..++
T Consensus 258 ~~Did~~v~Hqp~~k~----~~ka~~ril~~~~~~~~~~~l~~~~----e~~~~~~~~~GNt~sASi~l~L~~~l 324 (425)
T 3sqz_A 258 LTDFAAFCFHLPFPKL----ALKGFNKIMDKQVPSDLQEKLKVNF----EASILYSKQIGNIYTGSLFLGLLSLL 324 (425)
T ss_dssp GGGCSEEEECCSSHHH----HHHHHHHHCCTTSCHHHHHHHHHHH----HHHHTTHHHHBCCGGGHHHHHHHHHH
T ss_pred HHHCCEEEECCCcchh----HHHHHHHHHhccchHHHHHHhCCCH----HHHhhHHhccCccHHHHHHHHHHHHH
Confidence 9999999999533221 122222222 1110 01112335789999988766555443
No 77
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.62 E-value=3.4e-14 Score=136.77 Aligned_cols=188 Identities=17% Similarity=0.152 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+.+|+++||++||++++|++ .|++|+.... . ..+..++..++
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~DID-----~II~gt~t~q----------------------~-------~~A~~va~~Lg 100 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKEDID-----IFLAGDLLNQ----------------------N-------VTANYVARHLK 100 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCS-----EEEEEESSSS----------------------S-------TTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCc----------------------h-------hHHHHHHHHhC
Confidence 468999999999999999999888 8888874421 0 13445666675
Q ss_pred CCCCeeeecCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccCCCCcee
Q 011989 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 288 (473)
Q Consensus 209 l~Gp~~~v~~acasg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~~~~G~~ 288 (473)
+ |.+.|+++|+|++.||..|..+|++|.++.|||+|+|.++.......+.. ..+..+|. .-..
T Consensus 101 i--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p~-----------e~g~q~p~----ta~~ 163 (347)
T 3lma_A 101 I--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYPT-----------EYGGQKPG----TATS 163 (347)
T ss_dssp C--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-------------------------------
T ss_pred C--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCcc-----------hhcccCCc----hhcE
Confidence 4 89999999999999999999999999999999999998654321000000 00111111 1233
Q ss_pred eccceEEEEEccchHHHhcCCeEEEEEEEEEE--ecCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEEcC
Q 011989 289 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHHITQPHIDG----KGAILAMTRALKQSGLQSHQVDYVNAHA 362 (473)
Q Consensus 289 ~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~--~~d~~~~~~~~~~~----~~~~~a~~~al~~agl~~~dId~v~~hg 362 (473)
.+|||+|+||++.. ..+ +|.+... ..| .....|...+ ++....+.+.|+++|++|+|+|+|..+
T Consensus 164 t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg- 233 (347)
T 3lma_A 164 TVTGSGAVVLSQQP------GGI--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTG- 233 (347)
T ss_dssp CCCEEEEEEEESSC------CSE--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE-
T ss_pred EccceeEEEEEecC------CCC--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecC-
Confidence 46999999998643 122 3443322 112 1223332222 334567899999999999999999964
Q ss_pred CCCCCCCHHHHH--HHHHHhhcc
Q 011989 363 TSTPLGDTVEAT--AIRTVFSDH 383 (473)
Q Consensus 363 tgt~~~D~~E~~--a~~~~~~~~ 383 (473)
|.-++. -+.+++...
T Consensus 234 ------dL~q~g~~il~~l~~~~ 250 (347)
T 3lma_A 234 ------DLSGVGSPILKDLLKEE 250 (347)
T ss_dssp ------SCHHHHHHHHHHHHHHT
T ss_pred ------ChHHHHHHHHHHHHHHc
Confidence 222544 377777654
No 78
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=99.57 E-value=4.7e-14 Score=142.39 Aligned_cols=91 Identities=10% Similarity=0.034 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+++|+++||+++|+++++++ .|++++.++. ...+..+..|...||
T Consensus 54 ~~~La~~Aa~~AL~~agi~~~dId-----~IivaT~t~~--------------------------~~~ps~A~~v~~~LG 102 (460)
T 2v4w_A 54 INSLCLTVVQRLMERIQLPWDSVG-----RLEVGTETII--------------------------DKSKAVKTVLMELFQ 102 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE-----EEEEECSCCS--------------------------CSSSCHHHHHGGGTG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCC--------------------------CCCCcHHHHHHHHhC
Confidence 578999999999999999887776 7888885432 112345678999999
Q ss_pred CC---C-CeeeecCCcchHHHHHHHHHHHHHcCCC--CEEEEeecCCC
Q 011989 209 FQ---G-PNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTESS 250 (473)
Q Consensus 209 l~---G-p~~~v~~acasg~~Al~~A~~~I~~G~~--d~vlv~g~d~~ 250 (473)
+. . +++.+..+|++++.||..|..+|++|.+ +.|||+|+|.+
T Consensus 103 l~g~~~~~a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~ 150 (460)
T 2v4w_A 103 DSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIA 150 (460)
T ss_dssp GGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE
T ss_pred CCCCCCcEEEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEecccc
Confidence 83 2 6788999999999999999999999985 89999999974
No 79
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=99.57 E-value=6.9e-15 Score=150.68 Aligned_cols=177 Identities=12% Similarity=0.138 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|+++|+++||+++|+++++++ .|++++..+.. ..+..+..|...|+
T Consensus 73 ~~~La~~Aa~~aL~~agi~~~dId-----~li~~T~t~~~--------------------------~~ps~a~~v~~~L~ 121 (478)
T 2p8u_A 73 INSLCMTVVQNLMERNNLSYDCIG-----RLEVGTETIID--------------------------KSKSVKTNLMQLFE 121 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECSCCSC--------------------------SSSCHHHHHGGGTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCcc--------------------------cCccHHHHHHHHHh
Confidence 578999999999999999877765 67777754321 12344567774444
Q ss_pred ---CCC-CeeeecCCcchHHHHHHHHHHHHHcCC--CCEEEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccC
Q 011989 209 ---FQG-PNHAAVTACATGAHSIGDAARMIQFGD--SDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282 (473)
Q Consensus 209 ---l~G-p~~~v~~acasg~~Al~~A~~~I~~G~--~d~vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~ 282 (473)
+.. +++.+..+|++++.||..|..+|++|. .+.|||+++|.. . |..
T Consensus 122 ~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia-~---------------------------~~~ 173 (478)
T 2p8u_A 122 ESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA-V---------------------------YAT 173 (478)
T ss_dssp TTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE-C---------------------------CCS
T ss_pred hcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee-c---------------------------ccC
Confidence 444 778899999999999999999999999 999999999941 0 222
Q ss_pred CCCceeeccceEEEEEccchHHHhcCCeEEEE-EEEEEEecCCCCCCCC-------CCChHH-----------HHHHHHH
Q 011989 283 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAE-VRGYGMSGDAHHITQP-------HIDGKG-----------AILAMTR 343 (473)
Q Consensus 283 ~~~G~~~geGaaavvL~~~~~A~~~g~~~~a~-i~g~~~~~d~~~~~~~-------~~~~~~-----------~~~a~~~ 343 (473)
.....++||||+|+||++.+. . ++.. +.|.. ..+......| ...+.. ....+++
T Consensus 174 ~~~~~~fGdGA~A~Ll~~~~~----~--~l~~~~~gs~-~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~ 246 (478)
T 2p8u_A 174 GNARPTGGVGAVALLIGPNAP----L--IFERGLRGTH-MQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCK 246 (478)
T ss_dssp STTGGGCEEEEEEEEEESSCS----E--EECTTCCEEE-ECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccceeEEEEEecCCC----c--eEeeccceec-ccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHH
Confidence 223567999999999986421 0 1000 01211 1112211111 112211 1134556
Q ss_pred HHH--------HcCCCCCCccEEEEcCCCCCCCCHH
Q 011989 344 ALK--------QSGLQSHQVDYVNAHATSTPLGDTV 371 (473)
Q Consensus 344 al~--------~agl~~~dId~v~~hgtgt~~~D~~ 371 (473)
.++ ++|++++|||++..|-.+.+..+.+
T Consensus 247 ~l~~~~~~~~~~~g~~~~did~~v~H~~~~ki~~~~ 282 (478)
T 2p8u_A 247 KIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKS 282 (478)
T ss_dssp HHHHHHHHHTCCCCCCGGGCSEEEECCSSHHHHHHH
T ss_pred HHhhhccccccccCCChHHcCEEEecCCcHHHHHHH
Confidence 666 6799999999999997666554443
No 80
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=99.39 E-value=1.2e-12 Score=134.03 Aligned_cols=115 Identities=12% Similarity=0.090 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcC
Q 011989 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (473)
Q Consensus 129 ~~~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 208 (473)
...|++.|+++||+++|+++++++ .|+++|.++.. ..+..+..|...||
T Consensus 54 ~~~ma~~Aa~~al~~a~i~~~~Id-----~ii~aT~t~~~--------------------------~~ps~a~~v~~~l~ 102 (460)
T 2wya_A 54 INSLCLTVVQRLMERIQLPWDSVG-----RLEVGTETIID--------------------------KSKAVKTVLMELFQ 102 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE-----EEEEECSCCSC--------------------------SSSCHHHHHGGGTG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCchHHHHHHHHh
Confidence 467999999999999999877776 68888865321 12345667888887
Q ss_pred CCC----CeeeecCCcchHHHHHHHHHHHHHcCCCCE--EEEeecCCCcChHHHHHHhhhhccccccCCCCCCCCcCccC
Q 011989 209 FQG----PNHAAVTACATGAHSIGDAARMIQFGDSDV--MVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282 (473)
Q Consensus 209 l~G----p~~~v~~acasg~~Al~~A~~~I~~G~~d~--vlv~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pfd~ 282 (473)
+.| +++.+..+|++++.||..|.++|++|..+. +|++..+. .. |..
T Consensus 103 ~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~-~~---------------------------~~d 154 (460)
T 2wya_A 103 DSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDI-AV---------------------------YPS 154 (460)
T ss_dssp GGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE-EC---------------------------CCS
T ss_pred ccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccc-cc---------------------------ccc
Confidence 654 457799999999999999999999998764 44433332 00 222
Q ss_pred CCCceeeccceEEEEEccch
Q 011989 283 GRDGFVIGEGSGVLVLEELE 302 (473)
Q Consensus 283 ~~~G~~~geGaaavvL~~~~ 302 (473)
.......||||+|++++..+
T Consensus 155 ~~~~~~~GdGA~A~l~~~~~ 174 (460)
T 2wya_A 155 GNARPTGGAGAVAMLIGPKA 174 (460)
T ss_dssp STTGGGCEEEEEEEEEESSC
T ss_pred ccccccCcchHHhhhcccCC
Confidence 33455679999999998643
No 81
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=82.80 E-value=6.2 Score=38.61 Aligned_cols=100 Identities=15% Similarity=0.058 Sum_probs=58.0
Q ss_pred EEEEEEEEecCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCc
Q 011989 313 AEVRGYGMSGDAHH-ITQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSL 389 (473)
Q Consensus 313 a~i~g~~~~~d~~~-~~~~~~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~ 389 (473)
+.|.|.+...-+.. ...++.. .+-..+++++||+++|++++|||.+.+- +.++.. ...-...+...++.. ...
T Consensus 7 v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g-~~~~~~~~~~~a~~~~~~lGl~---~~~ 82 (395)
T 4e1l_A 7 VVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIG-NVLQTGLGQNVARQIAINAGIP---NSV 82 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CCCCSSTTCCHHHHHHHHTTCC---TTS
T ss_pred EEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcchHHHHHHHHcCCC---CCc
Confidence 46777765543322 1122222 2345689999999999999999987653 322221 111223333334432 123
Q ss_pred eeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 390 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 390 ~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
|...+ +..+++++..+..+...++.|.
T Consensus 83 p~~~v-----~~~Css~~~al~~A~~~I~~G~ 109 (395)
T 4e1l_A 83 PSYTV-----NKLCGSGLKSVQLAAQSITSGE 109 (395)
T ss_dssp CEEEE-----CCGGGHHHHHHHHHHHHHHTTS
T ss_pred eEEEc-----cccchHHHHHHHHHHHHHhCCC
Confidence 33222 4567788889999999998775
No 82
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=81.71 E-value=7 Score=38.26 Aligned_cols=100 Identities=11% Similarity=0.015 Sum_probs=58.3
Q ss_pred EEEEEEEEecCCCC-CCCCCCCh-HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCc
Q 011989 313 AEVRGYGMSGDAHH-ITQPHIDG-KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSL 389 (473)
Q Consensus 313 a~i~g~~~~~d~~~-~~~~~~~~-~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~ 389 (473)
+.|.|.+...-+.. ...++... +-..+++++||+++|++++|||.+.+- +.++.. ...-...+...++.. ...
T Consensus 9 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g-~~~~~~~~~~~a~~v~~~lGl~---~~~ 84 (396)
T 4dd5_A 9 VVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLG-GVLTAGLGQNIARQIALGAGIP---VEK 84 (396)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CSCCTTSCSCHHHHHHHHTTCC---TTS
T ss_pred EEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eecCCCCCchHHHHHHHHcCCC---CCc
Confidence 46777765543322 12222222 345689999999999999999987663 322221 122233344444432 123
Q ss_pred eeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 390 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 390 ~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
|...+ +..+++++..+..+...++.|.
T Consensus 85 p~~~v-----~~aCss~~~al~~A~~~I~~G~ 111 (396)
T 4dd5_A 85 PAMTI-----NIVCGSGLRSVSMASQLIALGD 111 (396)
T ss_dssp CEEEE-----CCGGGHHHHHHHHHHHHHHHTS
T ss_pred eEEEe-----ccccHHHHHHHHHHHHHHhcCC
Confidence 33322 3456788888888999888775
No 83
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=79.00 E-value=5.5 Score=38.16 Aligned_cols=78 Identities=10% Similarity=-0.015 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC-CCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-..++++++|+++|++++|||.+.. ++.++. ..+.-...+...++.. ...+...+ ...+++|+..+..+
T Consensus 70 ~La~~Aa~~al~~ag~~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lGl~---~~~~~~~v-----~~aC~s~~~al~~A 140 (345)
T 3s21_A 70 DAATQAARKALIDANIGIEKIGLLIN-TSVSRDYLEPSTASIVSGNLGVS---DHCMTFDV-----ANACLAFINGMDIA 140 (345)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-CCSCCSCSSSCHHHHHHHHHTCC---TTCEEEEC-----CCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCChHHHHHHHHhCCC---CCceEEeE-----CCcCHHHHHHHHHH
Confidence 34578899999999999999998765 444432 1222234455555542 12333333 22566778888888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 141 ~~~i~~g~ 148 (345)
T 3s21_A 141 ARMLERGE 148 (345)
T ss_dssp HHHHHHTS
T ss_pred HHHHHCCC
Confidence 88888764
No 84
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=78.78 E-value=5.2 Score=38.00 Aligned_cols=77 Identities=10% Similarity=0.025 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-..++++++|+++|++++|||.+.. ++.++.. .+.-...+...++.. +++...+ ...+++|+..+..+
T Consensus 60 ~La~~Aa~~aL~~ag~~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lGl~----~~~~~~v-----~~~C~s~~~al~~A 129 (323)
T 3il3_A 60 TMGFEAAKNAIEAAQINPQDIELIIV-ATTSHSHAYPSAACQVQGLLNID----DAISFDL-----AAACTGFVYALSVA 129 (323)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCCEEEE-ECSCCSCSSSCHHHHHHHHTTCS----SCEEEEE-----CCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCccHHHHHHHHhCCC----CccEEEE-----CCccHHHHHHHHHH
Confidence 34578999999999999999998766 3434321 122233344445432 2343333 23566778888888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 130 ~~~i~~g~ 137 (323)
T 3il3_A 130 DQFIRAGK 137 (323)
T ss_dssp HHHHHTTS
T ss_pred HHHHHCCC
Confidence 88888764
No 85
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=78.19 E-value=8.8 Score=37.49 Aligned_cols=100 Identities=16% Similarity=0.105 Sum_probs=57.6
Q ss_pred EEEEEEEEecCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCC-HHHHHHHHHHhhcccCCCCc
Q 011989 313 AEVRGYGMSGDAHH-ITQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSL 389 (473)
Q Consensus 313 a~i~g~~~~~d~~~-~~~~~~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D-~~E~~a~~~~~~~~~~~~~~ 389 (473)
+.|.|.+...-+.. ...++.. ..-..+++++||+++|++++|||.+.+ |+.++.+. ..-...+...++.. ...
T Consensus 7 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~-g~~~~~~~~~~~a~~i~~~lGl~---~~~ 82 (394)
T 3ss6_A 7 VVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVIL-GHCIQRTDEANTARTAALAAGFP---DTV 82 (394)
T ss_dssp EEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEE-ECSSCCGGGCSHHHHHHHHTTCC---TTC
T ss_pred EEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEE-EEccCCCccchHHHHHHHHcCCC---CCc
Confidence 45777665543321 1122222 234568999999999999999998765 33332211 11122233333322 123
Q ss_pred eeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 390 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 390 ~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
|...+ +..+++++..+..+...++.|.
T Consensus 83 p~~~v-----~~aCss~~~al~~A~~~I~~G~ 109 (394)
T 3ss6_A 83 TGYTI-----QRQCSSGMQAIMSAAMQIQLGV 109 (394)
T ss_dssp EEEEE-----ECGGGHHHHHHHHHHHHHHHTS
T ss_pred eEEEe-----cCcchHHHHHHHHHHHHHhCCC
Confidence 33322 4567788888989999998775
No 86
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=77.84 E-value=5.1 Score=38.39 Aligned_cols=76 Identities=20% Similarity=0.098 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC-CCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHH
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 414 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~ 414 (473)
-..+|.++||+++|++++|||++... |.|+. -.+.-+.-++..++... .+...+ ...+++++..|..+.
T Consensus 65 la~~Aa~~aL~~ag~~~~dId~li~~-t~t~~~~~P~~a~~v~~~LGl~~----~~a~di-----~~~C~g~~~aL~~A~ 134 (350)
T 4ewp_A 65 MAVGAAREALERAGLQGSDLDAVIVS-TVTFPHATPSAAALVAHEIGATP----APAYDV-----SAACAGYCYGVAQAD 134 (350)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEEE-CSCCSCSSSCHHHHHHHHTTCTT----SCEEEE-----ECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCCCchHHHHHHHhCCCC----ceEEEe-----ecchhhHHHHHHHhh
Confidence 34689999999999999999987653 44432 22334444566565431 221111 113445555565565
Q ss_pred HHHHhCc
Q 011989 415 LAIHHGV 421 (473)
Q Consensus 415 ~~l~~~~ 421 (473)
..++.+.
T Consensus 135 ~~i~~g~ 141 (350)
T 4ewp_A 135 ALVRSGT 141 (350)
T ss_dssp HHHHTTS
T ss_pred hhhhCCC
Confidence 5666543
No 87
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=77.38 E-value=5.4 Score=37.94 Aligned_cols=78 Identities=19% Similarity=0.106 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-..++++++|+++|++++|||.+... +.++.. .+.-...+...++.. ...+...+ +..+++|+..+..+
T Consensus 67 ~la~~Aa~~al~~ag~~~~~Id~vi~~-t~~~~~~~p~~a~~v~~~lgl~---~~~~~~~v-----~~~C~s~~~al~~A 137 (333)
T 4dfe_A 67 DLAFIASQRAIEAADIDPQSIDLIIVA-TSTPDFVFPSTACLLQNKLGIR---NHGAAFDV-----QAVCSGFAYAVATA 137 (333)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEE-CSSCSSSBSCHHHHHHHHTTCC---SCCEEEEE-----ECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCCcHHHHHHHHhCCC---CCCcEEEe-----CcccHHHHHHHHHH
Confidence 445789999999999999999987663 444321 122233445555541 12333322 34667788888888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 138 ~~~i~~g~ 145 (333)
T 4dfe_A 138 DSFIRSGQ 145 (333)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCC
Confidence 88888764
No 88
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=77.37 E-value=4.1 Score=40.28 Aligned_cols=77 Identities=17% Similarity=0.070 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 416 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~ 416 (473)
..+|+++||+++|++++|||.+.+- |.|+..-+.-...+...++... .++-. .+....+++|+..|..+...
T Consensus 141 a~~Aa~~AL~~agi~~~dId~li~~-t~t~~~~P~~a~~v~~~LGl~~---~~~~~----~v~~~~Cagg~~AL~~A~~~ 212 (413)
T 3v7i_A 141 GERAARGALQIAGLDVADVDCLITS-NSTTPALPGLDVALANRLPLRG---DTMLL----PATQWACVAGTRSLALAADL 212 (413)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEE-CCSSCCSSCHHHHHHHHTTCCT---TCEEE----EESSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHCCEEEEE-ccCCCCcCHHHHHHHHHhCCCC---CceEE----EeeCCccHHHHHHHHHHHHH
Confidence 4688999999999999999987653 3333222222233444444321 11111 11145666777777777777
Q ss_pred HHhCc
Q 011989 417 IHHGV 421 (473)
Q Consensus 417 l~~~~ 421 (473)
++.+.
T Consensus 213 i~ag~ 217 (413)
T 3v7i_A 213 VAADP 217 (413)
T ss_dssp HHHCT
T ss_pred HhcCC
Confidence 77664
No 89
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=76.61 E-value=6.1 Score=38.14 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC-CCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHH
Q 011989 334 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 412 (473)
Q Consensus 334 ~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~ 412 (473)
..-...+++++|+++|++++|||++..- +.++. ..+.-...+...++.. +++...+ +..+++|+..|..
T Consensus 75 ~~La~~Aa~~aL~~agl~~~dId~vi~~-t~~~~~~~p~~a~~v~~~lGl~----~~~~~~v-----~~aC~s~~~Al~~ 144 (359)
T 3h78_A 75 SALMVPAARQAIEAAGLLPEDIDLLLVN-TLSPDHHDPSQACLIQPLLGLR----HIPVLDI-----RAQASGLLYGLQM 144 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEE-CSSCSSSBSCHHHHHHHHHTCC----SCCEEEE-----ECGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEEE-eCCCCCCCCcHHHHHHHHcCCC----CCcEEEE-----CCHhHHHHHHHHH
Confidence 3456789999999999999999987653 33331 1121233344445532 2332222 2456677777878
Q ss_pred HHHHHHhCc
Q 011989 413 AVLAIHHGV 421 (473)
Q Consensus 413 ~~~~l~~~~ 421 (473)
+...++.|.
T Consensus 145 A~~~i~sG~ 153 (359)
T 3h78_A 145 ARGQILAGL 153 (359)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHCCC
Confidence 888888664
No 90
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=76.37 E-value=16 Score=35.52 Aligned_cols=100 Identities=10% Similarity=-0.084 Sum_probs=56.7
Q ss_pred EEEEEEEEecCCCCC--CCCCC-ChHHHHHHHHHHHHHc-CCCCCCccEEEEcCCCCCCC--CHHHHHHHHHHhhcccCC
Q 011989 313 AEVRGYGMSGDAHHI--TQPHI-DGKGAILAMTRALKQS-GLQSHQVDYVNAHATSTPLG--DTVEATAIRTVFSDHATS 386 (473)
Q Consensus 313 a~i~g~~~~~d~~~~--~~~~~-~~~~~~~a~~~al~~a-gl~~~dId~v~~hgtgt~~~--D~~E~~a~~~~~~~~~~~ 386 (473)
+.|.|.+.+.-+... ...+. ..+-..+++++||+++ |++++|||.+.+- +.++.+ ...-...+...++...
T Consensus 4 v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g-~~~~~~~~~~~~a~~~~~~~Gl~~-- 80 (387)
T 3goa_A 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWG-CVQQTLEQGFNIARNAALLAEIPH-- 80 (387)
T ss_dssp EEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEE-CSCCSBTTTTTHHHHHHHHTTCCT--
T ss_pred EEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEE-cccCCcccccHHHHHHHHHcCCCC--
Confidence 456676654433221 11111 2344568999999999 9999999987653 332221 1112222333333211
Q ss_pred CCceeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 387 GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 387 ~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
..|...+ +..+++++..+..+..+++.|.
T Consensus 81 -~~p~~~v-----~~aCss~l~Al~~A~~~I~sG~ 109 (387)
T 3goa_A 81 -SVPAVTV-----NRLCGSSMQALHDAARMIMTGD 109 (387)
T ss_dssp -TSCCEEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred -CCcEeEe-----cCcchHHHHHHHHHHHHHhCCC
Confidence 1232222 4567788999999999998775
No 91
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=76.18 E-value=6.5 Score=37.25 Aligned_cols=78 Identities=14% Similarity=0.047 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHH
Q 011989 334 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 412 (473)
Q Consensus 334 ~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~ 412 (473)
..-...+++++|+++|++++|||.+... +.++.. -+.-...+...++.. +.+...+ ...+++|+..+..
T Consensus 53 ~~La~~Aa~~aL~~ag~~~~~Id~li~~-t~~~~~~~p~~a~~v~~~lGl~----~~~~~~v-----~~aC~s~~~al~~ 122 (321)
T 3il6_A 53 SDLCHQVAKQLLEKSGKQASEIDFILVA-TVTPDFNMPSVACQVQGAIGAT----EAFAFDI-----SAACSGFVYALSM 122 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEE-CSSCSCSSSCHHHHHHHHTTCT----TCEEEEE-----CCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCcCCCcHHHHHHHHcCCC----CceEEEe-----CcccHHHHHHHHH
Confidence 3445688999999999999999987653 434221 111233344444432 1333222 2456677888888
Q ss_pred HHHHHHhCc
Q 011989 413 AVLAIHHGV 421 (473)
Q Consensus 413 ~~~~l~~~~ 421 (473)
+...++.|.
T Consensus 123 A~~~i~~g~ 131 (321)
T 3il6_A 123 AEKLVLSGR 131 (321)
T ss_dssp HHHHHHTSS
T ss_pred HHHHHHCCC
Confidence 888888763
No 92
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=74.92 E-value=5.1 Score=38.81 Aligned_cols=77 Identities=18% Similarity=0.007 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 416 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~ 416 (473)
..+++++||+++|++++|||.+.. ++.++..-+.-...+...++.. ..++...+. ...+++|+..+..+...
T Consensus 99 a~~Aa~~al~~ag~~~~~id~vi~-~t~~~~~~p~~a~~v~~~lGl~---~~~~~~~v~----~~aCss~~~al~~A~~~ 170 (374)
T 2h84_A 99 AQQACLRALKDWGGDKGDITHIVS-VTSTGIIIPDVNFKLIDLLGLN---KDVERVSLN----LMGCLAGLSSLRTAASL 170 (374)
T ss_dssp HHHHHHHHHHHHCSCGGGCCEEEE-EESSCCCSSCHHHHHHHHHTCC---TTCEEEEEE----SCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EeeCCCCCCcHHHHHHHHcCcC---CCCceEEec----CCcCHHHHHHHHHHHHH
Confidence 457889999999999999998753 4444321111223344445432 122322221 13566778888888888
Q ss_pred HHhCc
Q 011989 417 IHHGV 421 (473)
Q Consensus 417 l~~~~ 421 (473)
++.|.
T Consensus 171 i~~g~ 175 (374)
T 2h84_A 171 AKASP 175 (374)
T ss_dssp HTTCT
T ss_pred HHcCC
Confidence 88774
No 93
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=73.21 E-value=7.1 Score=37.55 Aligned_cols=78 Identities=15% Similarity=0.034 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC-CCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-..+++++||+++|++++|||.+... +.++. ..+.-...+...++.. ..++...+ +..+++|+..+..+
T Consensus 68 ~La~~Aa~~aL~~agi~~~~Id~vi~~-t~~~~~~~p~~a~~v~~~lGl~---~~~~~~~v-----~~aC~s~~~al~~A 138 (354)
T 4efi_A 68 DLCRKAGEKLLAGLGWQADSIDALIFV-SQTPNYRLPATAFVLQAELDLP---ASCLALDI-----NLGCSGYPQALWLG 138 (354)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEE-CSSCSCSSSCHHHHHHHHTTCC---TTSEEEEE-----CCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCCcHHHHHHHHcCcC---CCccEEee-----CcccHHHHHHHHHH
Confidence 345688999999999999999987653 43331 1122233344444432 12333322 24556777778888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 139 ~~~i~~g~ 146 (354)
T 4efi_A 139 MNLIQTGA 146 (354)
T ss_dssp HHHHHTTS
T ss_pred HHHHHCCC
Confidence 88888764
No 94
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=72.91 E-value=7.1 Score=38.20 Aligned_cols=76 Identities=13% Similarity=0.025 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC-CCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-..+++++||+++|++++|||.|.+ ++.|+. ..+.-+..+...++.. .+...+ ...+++|+..|..+
T Consensus 119 ~La~~Aa~~AL~~agi~~~dId~vi~-~t~t~~~~~p~~a~~v~~~LGl~-----~~~~dv-----~~aC~g~~~aL~~A 187 (392)
T 3led_A 119 EMAVTAAEQAIERWGKPRERIGAVLC-ACSNMQRAYPAMAIEVQNALGLG-----GFAFDM-----NVACSSATFGLKTA 187 (392)
T ss_dssp HHHHHHHHHHHHHHCSCGGGEEEEEE-ESSCCSCSBSCHHHHHHHHTTCC-----SEEEEE-----ECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCccHHHHHHHHHhCCC-----CeEEEE-----CCccHHHHHHHHHH
Confidence 34568899999999999999999775 344432 1122223344444431 222222 34566778888888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 188 ~~~i~~g~ 195 (392)
T 3led_A 188 ADFVGGGS 195 (392)
T ss_dssp HHHHHTTS
T ss_pred HHHHHCCC
Confidence 88888764
No 95
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=72.46 E-value=7.6 Score=37.75 Aligned_cols=77 Identities=14% Similarity=-0.017 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 416 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~ 416 (473)
...++++||+++|++++|||.+.. ++.++..-+.-...+...++.. +.++...+ ....+++|+..|..+...
T Consensus 88 a~~Aa~~aL~~agl~~~~id~vi~-~t~~~~~~p~~a~~v~~~lGl~---~~~~~~~v----~~~aCss~~~Al~~A~~~ 159 (382)
T 1u0m_A 88 VPAVIQRALDDAELLATDIDVIIY-VSCTGFMMPSLTAWLINEMGFD---STTRQIPI----AQLGCAAGGAAINRAHDF 159 (382)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEE-ECSSSCCSSCHHHHHHHHTTCC---TTCEEEEE----CSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEE-EecCCCCCCcHHHHHHHHhCCC---CCcceEEc----cCCcCHHHHHHHHHHHHH
Confidence 457899999999999999998754 4444422121223344444432 12232222 134666788888888888
Q ss_pred HHhCc
Q 011989 417 IHHGV 421 (473)
Q Consensus 417 l~~~~ 421 (473)
++.|.
T Consensus 160 i~~g~ 164 (382)
T 1u0m_A 160 CTAYP 164 (382)
T ss_dssp HHHST
T ss_pred HHcCC
Confidence 88774
No 96
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=72.10 E-value=18 Score=35.22 Aligned_cols=101 Identities=11% Similarity=0.060 Sum_probs=57.3
Q ss_pred EEEEEEEEecCCCCCC-CCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEEcC-CCCCCCCHHHHHHHHHHhhcccCCCCc
Q 011989 313 AEVRGYGMSGDAHHIT-QPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHA-TSTPLGDTVEATAIRTVFSDHATSGSL 389 (473)
Q Consensus 313 a~i~g~~~~~d~~~~~-~~~~-~~~~~~~a~~~al~~agl~~~dId~v~~hg-tgt~~~D~~E~~a~~~~~~~~~~~~~~ 389 (473)
++|.|.+...-+.+.. ..+. ..+-...++++||+++|++++|||.+.+-- +++..+.. -...+...++... ..
T Consensus 10 v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~-~a~~va~~lgl~~---~~ 85 (395)
T 2ib8_A 10 VVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQA-PTRQAVLGAGLPI---ST 85 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSC-HHHHHHHHTTCCT---TC
T ss_pred eEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCch-HHHHHHHHcCCCC---Cc
Confidence 4678877655443221 1111 234456789999999999999999865421 12111111 2223333344311 12
Q ss_pred eeeccccchhhhHHhHHHHHHHHHHHHHHhCcc
Q 011989 390 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 422 (473)
Q Consensus 390 ~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 422 (473)
|...+ .+.++||+..+..+...++.|..
T Consensus 86 p~~~v-----~~aCaS~~~Al~~A~~~I~~G~~ 113 (395)
T 2ib8_A 86 PCTTI-----NKVCASGMKAIMMASQSLMCGHQ 113 (395)
T ss_dssp CEEEE-----ECGGGHHHHHHHHHHHHHHTTSC
T ss_pred eEEEe-----cccccHHHHHHHHHHHHHHCCCC
Confidence 22222 34577889999999999987753
No 97
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=71.97 E-value=5.3 Score=39.05 Aligned_cols=77 Identities=18% Similarity=-0.000 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 416 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~ 416 (473)
...++++||+++|++++|||.+.. ++.++..-+.-...+...++.. .+++...+ ....+++|+..|..+...
T Consensus 117 a~~Aa~~aL~~agl~~~~Id~vi~-~t~~~~~~p~~a~~v~~~lGl~---~~~~~~~v----~~~aCas~~~Al~~A~~~ 188 (393)
T 1ted_A 117 AVDVSKRALAGLPYRAAEIGLLVL-ATSTGFIAPGVDVAIVKELGLS---PSISRVVV----NFMGCAAAMNALGTATNY 188 (393)
T ss_dssp HHHHHHHHHTTCCCCGGGEEEEEE-EESSCCCSSCHHHHHHHHHTCC---TTCEEEEE----ESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EEeCCCccChHHHHHHHHcCcC---CCcceeEe----ccchhHHHHHHHHHHHHH
Confidence 457889999999999999998763 3333321111223344455543 12222221 134667888888888888
Q ss_pred HHhCc
Q 011989 417 IHHGV 421 (473)
Q Consensus 417 l~~~~ 421 (473)
++.|.
T Consensus 189 i~~G~ 193 (393)
T 1ted_A 189 VRAHP 193 (393)
T ss_dssp HHHST
T ss_pred HHcCC
Confidence 88775
No 98
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=71.92 E-value=7.4 Score=37.86 Aligned_cols=76 Identities=13% Similarity=0.006 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHH
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
-..+|+++||+++|++++|||++.+. |.|...-+.-..-+...++... .+.... +.+..+++|+..|..+..
T Consensus 84 La~~Aa~~aL~~ag~~~~dId~li~~-t~t~~~~p~~a~~v~~~LGl~~---~~~~~~----v~~~~C~~~~~al~~A~~ 155 (379)
T 3euo_A 84 LAVEASRKAMAEARLVPAQITHMVST-TCTDSANPGYDHYVAKELGLSD---RLEKVL----LHGIGASGGLAALRTAAN 155 (379)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEE-CSSCCCSSCHHHHHHHHHTCCT---TCEEEE----ECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE-ecCCCCCCCHHHHHHHHcCCCC---CeeEEE----eeCchhhHHHHHHHHHHH
Confidence 34678999999999999999998543 4432222222333455555431 121111 112345566666666666
Q ss_pred HHHh
Q 011989 416 AIHH 419 (473)
Q Consensus 416 ~l~~ 419 (473)
.++.
T Consensus 156 ~i~a 159 (379)
T 3euo_A 156 LCLG 159 (379)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6663
No 99
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=71.42 E-value=8.1 Score=37.89 Aligned_cols=76 Identities=16% Similarity=0.018 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCce-eeccccchhhhHHhHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
...++++||+++|++++|||.+.. ++.++..-+.-...+...++.. ..++ ...+ ...+++|+..|..+..
T Consensus 119 a~~Aa~~aL~~agl~~~~Id~vi~-~t~~~~~~p~~a~~v~~~lGl~---~~~~~~~~v-----~~aC~s~~~al~~A~~ 189 (402)
T 3awk_A 119 AKEAAISAIKQWGQPKSKITHLVF-ATTSGVDMPGADFQLAKLLGLR---PTVKRVMLY-----QQGAYAGATVLRVAKD 189 (402)
T ss_dssp HHHHHHHHHHHHCSCGGGCCEEEE-EECSCCCSSCHHHHHHHHHTCC---TTCEEEEEE-----SCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EEeCCCcCChHHHHHHHHcCCC---CccceeeEE-----CCccHHHHHHHHHHHH
Confidence 467899999999999999998664 3333221121233444555543 1222 2222 2355677777878888
Q ss_pred HHHhCc
Q 011989 416 AIHHGV 421 (473)
Q Consensus 416 ~l~~~~ 421 (473)
.++.|.
T Consensus 190 ~i~sg~ 195 (402)
T 3awk_A 190 LAENNK 195 (402)
T ss_dssp HHHTST
T ss_pred HHHcCC
Confidence 888764
No 100
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=70.40 E-value=7.2 Score=37.68 Aligned_cols=78 Identities=17% Similarity=0.074 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCC-CCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~-~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-...+++++|+++|++++|||.+..- +.++ ...+.-...+...++.. ..++...+ ...+++|+..+..+
T Consensus 82 ~La~~Aa~~aL~~ag~~~~~Id~vi~~-t~~~~~~~p~~a~~v~~~lGl~---~~~~~~~v-----~~~C~s~~~Al~~A 152 (365)
T 3gwa_A 82 DLAYEAARKLFAQGAVGADQVDFVILC-TQAPDYVLPTSACMLQHRLGIP---THAGALDV-----NLGCSGYVYGLSLA 152 (365)
T ss_dssp HHHHHHHHHHHHTTSCCGGGCCEEEEE-ESSCSCSBSCHHHHHHHHTTCC---TTSEEEEE-----ECSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCCcHHHHHHHHcCCC---CCceEEEe-----cccChHHHHHHHHH
Confidence 345689999999999999999987663 3232 11122233344444432 12333322 13566778888888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 153 ~~~i~~g~ 160 (365)
T 3gwa_A 153 KGLVETGA 160 (365)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCC
Confidence 88888764
No 101
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=70.31 E-value=20 Score=34.92 Aligned_cols=101 Identities=17% Similarity=0.076 Sum_probs=58.5
Q ss_pred EEEEEEEEecCCCCC-CCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCC--HHHHHHHHHHhhcccCCCC
Q 011989 313 AEVRGYGMSGDAHHI-TQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD--TVEATAIRTVFSDHATSGS 388 (473)
Q Consensus 313 a~i~g~~~~~d~~~~-~~~~~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D--~~E~~a~~~~~~~~~~~~~ 388 (473)
++|.|.+...-+... ..++.. .+-...++++||+++|++++|||.|.+ |+.+.... ..-...+...++... .
T Consensus 4 v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~-g~~~~~~~~~~~~a~~va~~lGl~~---~ 79 (401)
T 1ulq_A 4 AWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYA-GCANQAGEDNRNVARMALLLAGFPV---E 79 (401)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCSSTTTTTHHHHHHHHTTCCT---T
T ss_pred eEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EecccCCCCCChHHHHHHHHhCCCC---C
Confidence 457777665433221 112222 234567899999999999999997654 44333211 112333444444311 1
Q ss_pred ceeeccccchhhhHHhHHHHHHHHHHHHHHhCcc
Q 011989 389 LAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 422 (473)
Q Consensus 389 ~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 422 (473)
.|...+ ...+++|+..+..+...++.|..
T Consensus 80 ~p~~~v-----~~aCas~~~Al~~A~~~I~~G~~ 108 (401)
T 1ulq_A 80 VAGCTV-----NRLCGSGLEAVAQAARAIWAGEG 108 (401)
T ss_dssp CEEEEE-----ECGGGHHHHHHHHHHHHHHTTSC
T ss_pred ccEeec-----cccchHHHHHHHHHHHHHHCCCC
Confidence 233222 34677889889999999987753
No 102
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=69.46 E-value=22 Score=34.99 Aligned_cols=100 Identities=13% Similarity=0.027 Sum_probs=55.9
Q ss_pred EEEEEEEEecCCCC--CCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCH-HHHHHHHHHhhcccCCCC
Q 011989 313 AEVRGYGMSGDAHH--ITQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT-VEATAIRTVFSDHATSGS 388 (473)
Q Consensus 313 a~i~g~~~~~d~~~--~~~~~~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~-~E~~a~~~~~~~~~~~~~ 388 (473)
++|.+++...-+.. ...++.. ..-...++++||+++|++++|||.|.+ |+.++.... .-...+...++.. ..
T Consensus 32 v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~-g~~~~~~~~~~~a~~~a~~lGl~---~~ 107 (418)
T 2iik_A 32 VVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICV-GNVLQPGAGAIMARIAQFLSDIP---ET 107 (418)
T ss_dssp EEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEE-ECSSSBGGGHHHHHHHHHHTTCC---TT
T ss_pred eEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCccccccHHHHHHHHcCCC---CC
Confidence 45777665433321 1122222 234567899999999999999997664 444432211 1111122233321 01
Q ss_pred ceeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 389 LAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 389 ~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
.|...+ ...+++|+..+..+...++.|.
T Consensus 108 ~p~~~v-----~~aCss~~~Al~~A~~~I~~G~ 135 (418)
T 2iik_A 108 VPLSTV-----NRQCSSGLQAVASIAGGIRNGS 135 (418)
T ss_dssp SCEEEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred ceEEEe-----CCCCHHHHHHHHHHHHHHHCCC
Confidence 232222 4457788999999999998775
No 103
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=69.20 E-value=12 Score=34.99 Aligned_cols=77 Identities=18% Similarity=0.100 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC-CCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-...++++||+++|++++|||.+.. ++.++. ..+.-...+...++.. ..+...+ ...+++|+..+..+
T Consensus 53 ~l~~~a~~~al~~ag~~~~~id~vi~-~~~~~~~~~~~~a~~v~~~lgl~----~~~~~~v-----~~aCas~~~al~~A 122 (313)
T 1zow_A 53 DLAYEASVKAIADAGIQPEDIDMIIV-ATATGDMPFPTVANMLQERLGTG----KVASMDQ-----LAACSGFMYSMITA 122 (313)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-ECSSCSCSSSCHHHHHHHHHTCC----SCCEEEE-----ECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCCC----CCcEEEE-----CCcCHHHHHHHHHH
Confidence 44567899999999999999997654 333321 1111123344445432 1232222 34677888888888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 123 ~~~i~~g~ 130 (313)
T 1zow_A 123 KQYVQSGD 130 (313)
T ss_dssp HHHHHTTS
T ss_pred HHHHHCCC
Confidence 88898774
No 104
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=69.19 E-value=4.5 Score=39.64 Aligned_cols=76 Identities=12% Similarity=0.003 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCce-eeccccchhhhHHhHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
..+|+++||+++|++++|||++.+- |.|+..-+.-..-+...++... .++ ...+ +..+++|+..|..+..
T Consensus 106 a~~Aa~~aL~~ag~~~~dId~vi~~-t~t~~~~p~~a~~v~~~LGl~~---~~~~~~~v-----~~~C~g~~~al~~A~~ 176 (393)
T 3ov2_A 106 AKEAAEKAIKEWGRPKSEITHLVFC-SISGIDMPGADYRLATLLGLPL---TVNRLMIY-----SQACHMGAAMLRIAKD 176 (393)
T ss_dssp HHHHHHHHHHHHTSCGGGCCEEEEE-ESSCCCBSCHHHHHHHHHTCCT---TSEEEEEE-----SCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-EeCCCCCCCHHHHHHHHcCCCC---CcceeeEE-----cCccHHHHHHHHHHHH
Confidence 4678999999999999999987643 3333222222333455555431 121 1111 3455677777777777
Q ss_pred HHHhCc
Q 011989 416 AIHHGV 421 (473)
Q Consensus 416 ~l~~~~ 421 (473)
.++.|.
T Consensus 177 ~i~sg~ 182 (393)
T 3ov2_A 177 LAENNR 182 (393)
T ss_dssp HHHHST
T ss_pred HHHcCC
Confidence 777664
No 105
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=68.87 E-value=8 Score=37.69 Aligned_cols=77 Identities=10% Similarity=0.013 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCce-eeccccchhhhHHhHHHHHHHHHH
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAV 414 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~li~~~ 414 (473)
-..+++++||+++|++++|||.+.. ++.++..-+.-..-+...++.. ..++ ...+ ...+++|+..|..+.
T Consensus 105 La~~Aa~~aL~~agl~~~~Id~li~-~t~~~~~~p~~a~~v~~~lGl~---~~~~~~~~v-----~~aC~~~~~al~~A~ 175 (389)
T 1i88_A 105 LGKEAAVKAIKEWGQPKSKITHLIV-CTTSGVDMPGADYQLTKLLGLR---PYVKRYMMY-----QQGAFAGGTVLRLAK 175 (389)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEE-EESSCCCSSCHHHHHHHHHTCC---TTCEEEEEE-----SCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EECCCCCCchHHHHHHHHcCcC---CCchhheeE-----CCccHHHHHHHHHHH
Confidence 3467889999999999999998764 3333321121223344455543 1222 2222 234567777787888
Q ss_pred HHHHhCc
Q 011989 415 LAIHHGV 421 (473)
Q Consensus 415 ~~l~~~~ 421 (473)
..++.|.
T Consensus 176 ~~i~~g~ 182 (389)
T 1i88_A 176 DLAENNK 182 (389)
T ss_dssp HHHHTST
T ss_pred HHHHcCC
Confidence 8888764
No 106
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=68.81 E-value=13 Score=34.63 Aligned_cols=78 Identities=18% Similarity=0.075 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHH
Q 011989 334 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 412 (473)
Q Consensus 334 ~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~ 412 (473)
..-...++++||+++|++++|||.+.. ++.++.. -+.-...+...++.. ..+...+ ...+++|+..+..
T Consensus 51 ~~l~~~a~~~al~~ag~~~~~id~v~~-~~~~~~~~~~~~a~~v~~~lgl~----~~~~~~v-----~~~C~s~~~al~~ 120 (309)
T 2ebd_A 51 TYMATQAAKEALREANLSPEELDLIIL-ATLTPQKRFPSTACLVQAQLKAK----GVYAFDI-----SAACSGFIYALDI 120 (309)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEE-ECSSCSSSSSCHHHHHHHHHTCT----TCEEEEE-----ECGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCCC----CceEEec-----CccchHHHHHHHH
Confidence 345578899999999999999997654 3333211 111223344445543 1233322 3457788888888
Q ss_pred HHHHHHhCc
Q 011989 413 AVLAIHHGV 421 (473)
Q Consensus 413 ~~~~l~~~~ 421 (473)
+...++.|.
T Consensus 121 A~~~i~~g~ 129 (309)
T 2ebd_A 121 ADSFIKSGK 129 (309)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHCCC
Confidence 888898774
No 107
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=68.63 E-value=13 Score=34.86 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-...++++||+++|++++|||.+.. |+.++.. .+.-..-+...++... .+...+ ...+++|+..+..+
T Consensus 53 ~l~~~a~~~al~~ag~~~~~id~vi~-g~~~~~~~~~~~a~~v~~~lgl~~----~~~~~v-----~~aCas~~~al~~A 122 (317)
T 1hnj_A 53 TMGFEAATRAIEMAGIEKDQIGLIVV-ATTSATHAFPSAACQIQSMLGIKG----CPAFDV-----AAACAGFTYALSVA 122 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCSCSSSCHHHHHHHHHTCCS----SCEEEE-----CCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCCCC----CeEEee-----CcccHHHHHHHHHH
Confidence 44568899999999999999997553 3443321 1112233444455321 232222 34577888888889
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 123 ~~~i~~g~ 130 (317)
T 1hnj_A 123 DQYVKSGA 130 (317)
T ss_dssp HHHHHTTS
T ss_pred HHHHHCCC
Confidence 89998775
No 108
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=68.05 E-value=13 Score=35.09 Aligned_cols=77 Identities=21% Similarity=0.084 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC-CCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-...++++||+++|++++|||.+.. ++.++. ..+.-...+...++.. ..+...+ ...+++++..+..+
T Consensus 63 ~la~~A~~~al~~ag~~~~~id~vi~-~t~~~~~~~~~~a~~v~~~lgl~----~~~~~~v-----~~aC~s~~~al~~A 132 (335)
T 1u6e_A 63 SMATEACRRALSNAGLSAADIDGVIV-TTNTHFLQTPPAAPMVAASLGAK----GILGFDL-----SAGAAGFGYALGAA 132 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCCCSSSCHHHHHHHHHTCT----TSEEEEE-----ECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCChHHHHHHHHhCCC----CCcEeee-----ccccHHHHHHHHHH
Confidence 44568899999999999999998654 444331 1111223344445432 1333333 23567888888888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 133 ~~~i~~g~ 140 (335)
T 1u6e_A 133 ADMIRGGG 140 (335)
T ss_dssp HHHHHHTS
T ss_pred HHHHHcCC
Confidence 88888775
No 109
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=67.73 E-value=5.1 Score=39.15 Aligned_cols=76 Identities=12% Similarity=-0.023 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCce-eeccccchhhhHHhHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
..+|+++||+++|++++|||++..- |.|+..-+.-...+...++... .+. .. .-+..+++|+..|..+..
T Consensus 100 a~~Aa~~AL~~ag~~~~dId~li~~-t~t~~~~p~~a~~v~~~LGl~~---~~~~~~-----~~~~~C~~~~~al~~A~~ 170 (387)
T 3oit_A 100 AAEAAKKAIAEWGRPAADITHLVVT-TNSGAHVPGVDFRLVPLLGLRP---SVRRTM-----LHLNGCFAGCAALRLAKD 170 (387)
T ss_dssp HHHHHHHHHHHHTSCGGGCCEEEEE-ESSCCEESCHHHHHHHHHTCCT---TCEEEE-----EECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-eeCCCCcccHHHHHHHHhCCCC---Ccceee-----EECchhHHHHHHHHHHHH
Confidence 4678999999999999999987653 3343211222333444555431 121 11 114456677777777877
Q ss_pred HHHhCc
Q 011989 416 AIHHGV 421 (473)
Q Consensus 416 ~l~~~~ 421 (473)
.++.|.
T Consensus 171 ~i~sg~ 176 (387)
T 3oit_A 171 LAENSR 176 (387)
T ss_dssp HHHSST
T ss_pred HHhcCC
Confidence 887664
No 110
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=66.72 E-value=7.8 Score=38.04 Aligned_cols=76 Identities=12% Similarity=0.059 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCce-eeccccchhhhHHhHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
...++++||+++|++++|||.+.. ++.++..-+.-..-+...++.. ..++ ...+ ...+++|+..+..+..
T Consensus 119 a~~Aa~~aL~~ag~~~~~Id~vi~-~t~~~~~~p~~a~~v~~~lGl~---~~~~~~~~v-----~~aC~s~~~al~~A~~ 189 (406)
T 2d3m_A 119 GTEAAVKAIEEWGRPKSEITHLVF-CTSCGVDMPSADFQCAKLLGLH---ANVNKYCIY-----MQGAYAGGTVMRYAKD 189 (406)
T ss_dssp HHHHHHHHHHHHCSCGGGCCEEEE-EESSCCEESCHHHHHHHHHTCC---TTCEEEEEE-----SCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCCHHHHHHHHcCcC---CCcceeeeE-----cCccHHHHHHHHHHHH
Confidence 467889999999999999998764 3333211111223344445543 1222 2222 3356677877888888
Q ss_pred HHHhCc
Q 011989 416 AIHHGV 421 (473)
Q Consensus 416 ~l~~~~ 421 (473)
.++.|.
T Consensus 190 ~i~~g~ 195 (406)
T 2d3m_A 190 LAENNR 195 (406)
T ss_dssp HHHTST
T ss_pred HHHcCC
Confidence 888764
No 111
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=66.69 E-value=8.4 Score=37.87 Aligned_cols=100 Identities=9% Similarity=-0.036 Sum_probs=52.0
Q ss_pred EEEEEEEEecCCCC--CCCCCCC-hHHHHHHHHHHHHH-cCCCCCCccEEEEcCCCCCCC--CHHHHHHHHHHhhcccCC
Q 011989 313 AEVRGYGMSGDAHH--ITQPHID-GKGAILAMTRALKQ-SGLQSHQVDYVNAHATSTPLG--DTVEATAIRTVFSDHATS 386 (473)
Q Consensus 313 a~i~g~~~~~d~~~--~~~~~~~-~~~~~~a~~~al~~-agl~~~dId~v~~hgtgt~~~--D~~E~~a~~~~~~~~~~~ 386 (473)
+.|.|.+.+.-+.+ ....+.. .+-..++++++|++ +|++++|||.+.+- +.++.+ ...-..-+...++..
T Consensus 9 v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g-~~~~~~~~~~~~a~~va~~lGlp--- 84 (407)
T 3svk_A 9 AFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILG-VVSPVGDQGGDIARTAVLAAGLP--- 84 (407)
T ss_dssp EEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEE-CC--------CHHHHHHHHTTCC---
T ss_pred eEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEE-ecCccccccCcHHHHHHHHcCCC---
Confidence 46777766544321 1112222 23356889999999 99999999987663 333321 111222333344431
Q ss_pred CCceeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 387 GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 387 ~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
...|...+ +..+++|+..+..+..+++.|.
T Consensus 85 ~~~pa~~v-----~~~Css~~~Al~~A~~~I~sG~ 114 (407)
T 3svk_A 85 ETTGGVQL-----NRFCASGLEAVNTAAQKVRSGW 114 (407)
T ss_dssp TTCEEEEE-----C---CBSCCHHHHHHHHHHHTS
T ss_pred CCCceEEe-----cCcChhHHHHHHHHHHHHHcCC
Confidence 12333322 3455666667777777777664
No 112
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=66.62 E-value=15 Score=34.90 Aligned_cols=77 Identities=19% Similarity=0.115 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-...++++||+++|++++|||.+.. |+.++.. .+.-...+...++.. ..+...+ ...+++|+..+..+
T Consensus 62 ~la~~Aa~~al~~ag~~~~~id~vi~-gt~~~~~~~p~~a~~v~~~lgl~----~~~~~~v-----~~aCas~~~Al~~A 131 (339)
T 1mzj_A 62 VMGVAASRRALEHAGVDPAEIDLVVV-STMTNFVHTPPLSVAIAHELGAD----NAGGFDL-----SAACAGFCHALSIA 131 (339)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCCCCSSCHHHHHHHHHTCT----TCEEEEE-----ECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCChHHHHHHHHhCCC----CccEEEc-----cccchHHHHHHHHH
Confidence 44567899999999999999997653 4433321 111223344445433 1233333 23567888888888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 132 ~~~i~~G~ 139 (339)
T 1mzj_A 132 ADAVESGG 139 (339)
T ss_dssp HHHHHHSS
T ss_pred HHHHHCCC
Confidence 88888774
No 113
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=66.57 E-value=28 Score=33.89 Aligned_cols=99 Identities=12% Similarity=0.020 Sum_probs=56.0
Q ss_pred EEEEEEEEecCCCCCC-CCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC--CCHHHHHHHHHHhhcccCCCC
Q 011989 313 AEVRGYGMSGDAHHIT-QPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL--GDTVEATAIRTVFSDHATSGS 388 (473)
Q Consensus 313 a~i~g~~~~~d~~~~~-~~~~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~--~D~~E~~a~~~~~~~~~~~~~ 388 (473)
++|.|.+...-+.... ..+.. .+-...++++||+++|++++|||.+.+ |+.+.. +.. -...+...++... .
T Consensus 8 v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~-g~~~~~~~~~~-~a~~ia~~lgl~~---~ 82 (397)
T 1wl4_A 8 VVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIF-GHVLAAGCGQN-PVRQASVGAGIPY---S 82 (397)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCTTSCSC-HHHHHHHHTTCCT---T
T ss_pred EEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCCH-HHHHHHHHcCCCC---C
Confidence 4677777654332211 11112 334567899999999999999997654 332221 111 1222333343210 1
Q ss_pred ceeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 389 LAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 389 ~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
.|...+ .+.++||+..+..+...++.|.
T Consensus 83 ~p~~~v-----~~aCaSg~~Ai~~A~~~I~~G~ 110 (397)
T 1wl4_A 83 VPAWSC-----QMICGSGLKAVCLAVQSIGIGD 110 (397)
T ss_dssp SCEEEE-----CCGGGHHHHHHHHHHHHHHTTS
T ss_pred ccEEEe-----cCcChhHHHHHHHHHHHHHCCC
Confidence 222222 3457789999999999998775
No 114
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=66.18 E-value=24 Score=34.23 Aligned_cols=100 Identities=10% Similarity=0.028 Sum_probs=56.6
Q ss_pred EEEEEEEEecCCCCCC-CCC-CChHHHHHHHHHHHHHcCCCCCCccEEEEc-CCCCCCCCHHHHHHHHHHhhcccCCCCc
Q 011989 313 AEVRGYGMSGDAHHIT-QPH-IDGKGAILAMTRALKQSGLQSHQVDYVNAH-ATSTPLGDTVEATAIRTVFSDHATSGSL 389 (473)
Q Consensus 313 a~i~g~~~~~d~~~~~-~~~-~~~~~~~~a~~~al~~agl~~~dId~v~~h-gtgt~~~D~~E~~a~~~~~~~~~~~~~~ 389 (473)
+.|.|.+...-+.... ..+ ...+-...++++||+++|++++|||.+.+- .++...+.. -...+...++... ..
T Consensus 5 v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~-~a~~ia~~lgl~~---~~ 80 (392)
T 2vu1_A 5 IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQN-PARQAAMKAGVPQ---EA 80 (392)
T ss_dssp EEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSC-HHHHHHHHTTCCT---TS
T ss_pred EEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcH-HHHHHHHHcCCCC---Cc
Confidence 4577776654332211 111 123445678999999999999999976542 222222211 1223333344321 12
Q ss_pred eeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 390 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 390 ~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
|...+ ...++||+..+..+...++.|.
T Consensus 81 p~~~v-----~~aCaSgl~Al~~A~~~I~~G~ 107 (392)
T 2vu1_A 81 TAWGM-----NQLCGSGLRAVALGMQQIATGD 107 (392)
T ss_dssp EEEEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred eEEEe-----cccchHHHHHHHHHHHHHHCCC
Confidence 33222 4467799999999999999775
No 115
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=66.06 E-value=32 Score=32.83 Aligned_cols=106 Identities=14% Similarity=0.128 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHH-HHHHHHHhccccCCCcchh-hhhhhHHHHHHHHhcCC
Q 011989 132 YALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVD-AAQMICEKRLRRLSPFFIP-RILINMASGHVSMKYGF 209 (473)
Q Consensus 132 la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~ia~~lgl 209 (473)
.+.+...+.|+|+|++++|++ -++-| +...... ....+..+..-+++..+.. +. ..|+-
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D-----~ivtg----dL~q~g~~il~~l~~~~g~~~~~~~~dcg~----------~iy~~ 268 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYD-----LILTG----DLSGVGSPILKDLLKEEGINVGTKHNDCGL----------MIYTP 268 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCS-----EEEEE----SCHHHHHHHHHHHHHHTTCCCGGGEEEGGG----------TSSCC
T ss_pred HHHHHHHHHHHHhCCCHHHcC-----EEecC----ChHHHHHHHHHHHHHHcCCChhHCccccce----------EEecC
Confidence 455666999999999888775 44432 1222211 1222222221111111100 10 11222
Q ss_pred CCCeeeecCCcc-hHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH
Q 011989 210 QGPNHAAVTACA-TGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM 256 (473)
Q Consensus 210 ~Gp~~~v~~aca-sg~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~ 256 (473)
.-+.+.=.+||+ |+.+--.+-...|+.|+.+.+|++++-..++|..+
T Consensus 269 ~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~~ril~~~tGalls~~~~ 316 (347)
T 3lma_A 269 DQQVFAGGSGCACSAVVTFAHIFKEIEAGRLNRVLVVATGALLSPTII 316 (347)
T ss_dssp ---------CCCCHHHHHHHTHHHHHHTTSCSEEEEEEEEECCCHHHH
T ss_pred CCcccCCCCccccHHHHHHHHHHHHHhcCcccEEEEEecccccCcchh
Confidence 223333445665 34444455566799999999999999998888764
No 116
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=65.27 E-value=18 Score=34.67 Aligned_cols=79 Identities=13% Similarity=-0.039 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCC--CCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATS--TPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 412 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtg--t~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~ 412 (473)
.-..++++++|+++|++++|||+|..--+. ++..-.. ...+...++.. .++...+ ...+++|+..|..
T Consensus 56 ~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~-a~~v~~~lG~~----~~~~~~v-----~~aC~~~~~al~~ 125 (357)
T 3s3l_A 56 RMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPA-ASYVAHEAVGR----HVPAFGL-----AQRCNGGMGAIEL 125 (357)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCH-HHHHHHHHTCS----SSCEEEE-----ECGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccH-HHHHHHHhCCC----CCcEEEE-----cCccHHHHHHHHH
Confidence 445789999999999999999998764321 2211112 23344444432 2332222 2355677777878
Q ss_pred HHHHHHhCccC
Q 011989 413 AVLAIHHGVAP 423 (473)
Q Consensus 413 ~~~~l~~~~ip 423 (473)
+...++.|...
T Consensus 126 A~~~i~sg~~~ 136 (357)
T 3s3l_A 126 AGAYLGSGIGA 136 (357)
T ss_dssp HHHHHHTTSSS
T ss_pred HHHHHHcCCCC
Confidence 88888876543
No 117
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=64.89 E-value=13 Score=37.26 Aligned_cols=75 Identities=13% Similarity=0.001 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHH
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
-..+|+++||+++|++++|||+|.+. |.|...-+.-..-+...++... .+.... +.+..+++|+..|..+..
T Consensus 113 La~~Aa~~AL~~agi~~~dId~li~~-t~t~~~~P~~a~~v~~~LGl~~---~~~~~d----v~~~~Csgg~~AL~~A~~ 184 (465)
T 3e1h_A 113 LAVEASRKAMAEARLVPAQITHMVST-TCTDSANPGYDHYVAKELGLSD---RLEKVL----LHGIGCSGGLAALRTAAN 184 (465)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEE-CSSCCCSSCHHHHHHHHHTCCT---TCEEEE----ECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE-eeCCCCCCcHHHHHHHHhCCCC---CeeEEE----ecCCcchHHHHHHHHHHH
Confidence 34678999999999999999998654 4332222223334555555431 121111 112345566666666666
Q ss_pred HHH
Q 011989 416 AIH 418 (473)
Q Consensus 416 ~l~ 418 (473)
.++
T Consensus 185 ~i~ 187 (465)
T 3e1h_A 185 LCL 187 (465)
T ss_dssp HHH
T ss_pred HHh
Confidence 666
No 118
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=64.51 E-value=10 Score=37.38 Aligned_cols=77 Identities=14% Similarity=0.000 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCce-eeccccchhhhHHhHHHHHHHHHH
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAV 414 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~li~~~ 414 (473)
-...++++||+++|++++|||++..- +.++..-+.-...+...++.. ..++ ...+ ...+++|+..|..+.
T Consensus 123 La~~Aa~~aL~~agl~~~dId~li~~-t~~~~~~p~~a~~v~~~LGl~---~~~~~~~~v-----~~aCas~~~AL~~A~ 193 (413)
T 2p0u_A 123 LAKEASMNAIKEWGRPKSEITHIVMA-TTSGVNMPGAELATAKLLGLR---PNVRRVMMY-----QQGAFAGATVLRVAK 193 (413)
T ss_dssp HHHHHHHHHHHHHTSCGGGCCEEEEE-ESSCCCBSCHHHHHHHHHTCC---TTCEEEEEE-----SCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHCCEEEEE-ecCCcccCcHHHHHHHHhCCC---CCcceEeEE-----CCccHHHHHHHHHHH
Confidence 34678999999999999999987653 333221111223344555543 1232 2222 234557777777777
Q ss_pred HHHHhCc
Q 011989 415 LAIHHGV 421 (473)
Q Consensus 415 ~~l~~~~ 421 (473)
..++.|.
T Consensus 194 ~~i~sg~ 200 (413)
T 2p0u_A 194 DLAENNA 200 (413)
T ss_dssp HHHHHST
T ss_pred HHHHhCC
Confidence 7787764
No 119
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=64.21 E-value=7.8 Score=38.19 Aligned_cols=77 Identities=13% Similarity=-0.009 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCce-eeccccchhhhHHhHHHHHHHHHH
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAV 414 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~li~~~ 414 (473)
-...++++||+++|++++|||.+.. ++.++..-+.-...+...++.. ..++ ...+ ...+++|+..|..+.
T Consensus 128 La~~Aa~~AL~~agl~~~~Id~li~-~t~~~~~~p~~a~~v~~~lGl~---~~~~~~~~v-----~~aCas~~~AL~~A~ 198 (413)
T 1xes_A 128 LAKEAAEKAIQEWGQSKSGITHLIF-CSTTTPDLPGADFEVAKLLGLH---PSVKRVGVF-----QHGCFAGGTVLRMAK 198 (413)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEE-EESCCCEESCHHHHHHHHHTCC---TTCEEEEEE-----SCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EEeCCCccchHHHHHHHHcCcC---Cccchhcee-----cCccHHHHHHHHHHH
Confidence 3467899999999999999998753 3333311111223344445543 1221 2222 235567777787788
Q ss_pred HHHHhCc
Q 011989 415 LAIHHGV 421 (473)
Q Consensus 415 ~~l~~~~ 421 (473)
..++.|.
T Consensus 199 ~~i~~G~ 205 (413)
T 1xes_A 199 DLAENNR 205 (413)
T ss_dssp HHHHTST
T ss_pred HHHHcCC
Confidence 8888764
No 120
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=64.00 E-value=7.3 Score=37.94 Aligned_cols=77 Identities=14% Similarity=0.023 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCce-eeccccchhhhHHhHHHHHHHHHH
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAV 414 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~li~~~ 414 (473)
-..+++++||+++|++++|||++..- +.++..-+.-...+...++.. ..++ ...+ ...+++|+..|..+.
T Consensus 101 La~~Aa~~aL~~ag~~~~~Id~li~~-t~~~~~~p~~a~~v~~~lGl~---~~~~~~~~v-----~~aC~s~~~al~~A~ 171 (387)
T 3a5r_A 101 LGKEAALKAIKEWGQPKSKITHLIVC-CLAGVDMPGADYQLTKLLDLD---PSVKRFMFY-----HLGCYAGGTVLRLAK 171 (387)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEEE-ESSCCEESCHHHHHHHHTTCC---TTCEEEEEE-----SCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE-ecCCCCCCcHHHHHHHHcCcC---CCcceeeeE-----ccccHHHHHHHHHHH
Confidence 34678999999999999999987643 333211111223344444432 1221 2222 234567777777788
Q ss_pred HHHHhCc
Q 011989 415 LAIHHGV 421 (473)
Q Consensus 415 ~~l~~~~ 421 (473)
..++.|.
T Consensus 172 ~~i~~g~ 178 (387)
T 3a5r_A 172 DIAENNK 178 (387)
T ss_dssp HHHHHST
T ss_pred HHHHhCC
Confidence 8887764
No 121
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=63.42 E-value=10 Score=37.05 Aligned_cols=76 Identities=13% Similarity=0.055 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCce-eeccccchhhhHHhHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAVL 415 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~li~~~~ 415 (473)
..+++++||+++|++++|||++.. ++.++..-+.-...+...++.. ..++ ...+ ...+++|+..|..+..
T Consensus 111 a~~Aa~~aL~~agl~~~~Id~vi~-~t~~~~~~p~~a~~v~~~lGl~---~~~~~~~~v-----~~aCss~~~al~~A~~ 181 (402)
T 1ee0_A 111 GKEAAVKAIDEWGLPKSKITHLIF-CTTAGVDMPGADYQLVKLLGLS---PSVKRYMLY-----QQGAAAGGTVLRLAKD 181 (402)
T ss_dssp HHHHHHHHHHHHCSCGGGCCEEEE-ECSSCCEESCHHHHHHHHHTCC---TTCEEEEEC-----SCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCChHHHHHHHHcCcC---CCcceeeEE-----CchhHHHHHHHHHHHH
Confidence 467899999999999999998764 3333321111233344555543 1221 2222 2355677777878888
Q ss_pred HHHhCc
Q 011989 416 AIHHGV 421 (473)
Q Consensus 416 ~l~~~~ 421 (473)
.++.|.
T Consensus 182 ~i~~g~ 187 (402)
T 1ee0_A 182 LAENNK 187 (402)
T ss_dssp HHHHST
T ss_pred HHHcCC
Confidence 887764
No 122
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=58.26 E-value=15 Score=34.37 Aligned_cols=76 Identities=18% Similarity=0.004 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-...++++||+++|++++|||.+.. ++.++.. .+.-...+...++. +.+...+ ...+++|+..+..+
T Consensus 52 ~la~~a~~~al~~ag~~~~~id~vi~-~~~~~~~~~~~~a~~v~~~lgl-----~~~~~~v-----~~aCas~~~al~~A 120 (322)
T 1ub7_A 52 DLAFKAVEDLLRRHPGALEGVDAVIV-ATNTPDALFPDTAALVQARFGL-----KAFAYDL-----LAGCPGWIYALAQA 120 (322)
T ss_dssp HHHHHHHHHHHHHSTTTTTTEEEEEE-ECSSCSEEESCHHHHHHHHTTC-----CCEEEEE-----ECSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCC-----CCEEEee-----CccchHHHHHHHHH
Confidence 44567899999999999999997653 4443321 01112334444443 1333333 23567888888888
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 121 ~~~i~~g~ 128 (322)
T 1ub7_A 121 HALVEAGL 128 (322)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCC
Confidence 88898774
No 123
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=56.64 E-value=24 Score=35.02 Aligned_cols=81 Identities=11% Similarity=0.084 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-...+++++|+++|++++|||.+.+ +|.++.. -+.-...+...++.... ..++...+ ...+++|+..|..+
T Consensus 54 ~La~~Aa~~aL~~agi~~~~Id~li~-~t~t~~~~~p~~a~~v~~~lgl~g~-~~~~~~~v-----~~aC~gg~~AL~~A 126 (450)
T 2f82_A 54 SMSFNAVTSLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQLFEKCGN-TDVEGVDS-----TNACYGGTAALLNC 126 (450)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEE-ECCCCSCSSSCHHHHHTHHHHTTTC-CCCBCCEE-----CSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCHHHCCEEEE-EecCCCCCCCcHHHHHHHHhCCcCC-CCceEEEh-----hhhhHHHHHHHHHH
Confidence 34568899999999999999999884 4444321 11122334444443100 01222111 23566778888888
Q ss_pred HHHHHhCcc
Q 011989 414 VLAIHHGVA 422 (473)
Q Consensus 414 ~~~l~~~~i 422 (473)
...++.|..
T Consensus 127 ~~~I~sg~~ 135 (450)
T 2f82_A 127 VNWVESNSW 135 (450)
T ss_dssp HHHHHSTTC
T ss_pred HHHHHcCCC
Confidence 888887653
No 124
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=56.53 E-value=36 Score=32.96 Aligned_cols=101 Identities=11% Similarity=0.001 Sum_probs=56.4
Q ss_pred EEEEEEEEecCCCC--CCCCCCC-hHHHHHHHHHHHHHc-CCCCCCccEEEEcCCCCCCCC--HHHHHHHHHHhhcccCC
Q 011989 313 AEVRGYGMSGDAHH--ITQPHID-GKGAILAMTRALKQS-GLQSHQVDYVNAHATSTPLGD--TVEATAIRTVFSDHATS 386 (473)
Q Consensus 313 a~i~g~~~~~d~~~--~~~~~~~-~~~~~~a~~~al~~a-gl~~~dId~v~~hgtgt~~~D--~~E~~a~~~~~~~~~~~ 386 (473)
+.|.|.+...-+.. ....+.. .+-...++++||+++ |++++|||.+.+ |+.+.... ..-...+...++..
T Consensus 7 v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~-g~~~~~~~~~~~~a~~ia~~lgl~--- 82 (390)
T 1wdk_C 7 VVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIW-GCVNQTLEQGWNIARMASLMTQIP--- 82 (390)
T ss_dssp EEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEE-ECSSBSBTTTTTHHHHHHTTSSSC---
T ss_pred EEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEE-EeeccccCCCCcHHHHHHHHcCCC---
Confidence 45777776543322 1111112 344568899999999 999999987654 33322111 11112222222221
Q ss_pred CCceeeccccchhhhHHhHHHHHHHHHHHHHHhCcc
Q 011989 387 GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 422 (473)
Q Consensus 387 ~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 422 (473)
...|...+ .+.++||+..+..+...++.|..
T Consensus 83 ~~~p~~~v-----~~aCaS~~~Al~~A~~~I~~G~~ 113 (390)
T 1wdk_C 83 HTSAAQTV-----SRLCGSSMSALHTAAQAIMTGNG 113 (390)
T ss_dssp TTSEEEEE-----ECGGGHHHHHHHHHHHHHHTTSC
T ss_pred CCccEEEE-----cccchhHHHHHHHHHHHHHcCCC
Confidence 02232222 45678999999999999998753
No 125
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=55.03 E-value=34 Score=33.89 Aligned_cols=98 Identities=8% Similarity=-0.018 Sum_probs=55.7
Q ss_pred EEEEEEEEecCCCCC--CCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHH----HHHHHHHhhcccC
Q 011989 313 AEVRGYGMSGDAHHI--TQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVE----ATAIRTVFSDHAT 385 (473)
Q Consensus 313 a~i~g~~~~~d~~~~--~~~~~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E----~~a~~~~~~~~~~ 385 (473)
++|.|.+...-+... ...+.. ..-...++++||+++|++++|||.|.+ |+.+ .|... ...+...++..
T Consensus 32 v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~-g~~~--~~~~~~~~~a~~va~~lGl~-- 106 (442)
T 2wu9_A 32 VVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVV-GTVL--APGSQRASECRMAAFYAGFP-- 106 (442)
T ss_dssp EEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEE-ECCS--SBHHHHHHHHHHHHHHTTCC--
T ss_pred eEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-Eeec--CccCCCChHHHHHHHHcCCC--
Confidence 467777665433221 111222 234567899999999999999997654 3333 33221 11222333321
Q ss_pred CCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 386 SGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 386 ~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
...|...+ ...+++|+..+..+...++.|.
T Consensus 107 -~~~p~~~v-----~~aCaSg~~Al~~A~~~I~sG~ 136 (442)
T 2wu9_A 107 -ETVAVRTV-----NRQCSSGLQAVADVAAAIKAGF 136 (442)
T ss_dssp -TTSCEEEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred -CCceEEEe-----CCcCHHHHHHHHHHHHHHHCCC
Confidence 01232222 3456788988999999998775
No 126
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=48.16 E-value=30 Score=34.51 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCCC-CHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-..+|.++||+++|++++|||+|.+ +|-|+.. -+.-+.-++..++.... ..++ ... + ...+++|+..|..+
T Consensus 56 ~La~~Aa~~AL~~agi~~~dId~Iiv-aT~t~~~~~ps~A~~v~~~LGl~g~-~~~~--a~D--v-~~ACsGg~~AL~~A 128 (460)
T 2v4w_A 56 SLCLTVVQRLMERIQLPWDSVGRLEV-GTETIIDKSKAVKTVLMELFQDSGN-TDIE--GID--T-TNACYGGTASLFNA 128 (460)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEE-ECSCCSCSSSCHHHHHGGGTGGGTC-CCCB--CCE--E-ESGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCCcHHHHHHHHhCCCCC-CCcE--EEE--e-cchhHHHHHHHHHH
Confidence 34568899999999999999999865 5555431 12223334444443100 0111 111 1 12344566667777
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.|.
T Consensus 129 ~~~I~sg~ 136 (460)
T 2v4w_A 129 ANWMESSS 136 (460)
T ss_dssp HHHHTSTT
T ss_pred HHHHHhCC
Confidence 77777664
No 127
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=46.31 E-value=48 Score=32.11 Aligned_cols=100 Identities=10% Similarity=-0.037 Sum_probs=54.9
Q ss_pred EEEEEEEEecCCCC--CCCCCCC-hHHHHHHHHHHHHHcC----CCCCCccEEEEcCCCCCCCC-HHHHHHHHHHhhccc
Q 011989 313 AEVRGYGMSGDAHH--ITQPHID-GKGAILAMTRALKQSG----LQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHA 384 (473)
Q Consensus 313 a~i~g~~~~~d~~~--~~~~~~~-~~~~~~a~~~al~~ag----l~~~dId~v~~hgtgt~~~D-~~E~~a~~~~~~~~~ 384 (473)
++|.|.+...-+.. ....+.. .+-...++++||+++| ++++|||.|.+ |+.++... ..-...+...++...
T Consensus 12 v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~-g~~~~~~~~~~~a~~va~~lGl~~ 90 (393)
T 1afw_A 12 VVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVAC-GNVLNVGAGATEHRAACLASGIPY 90 (393)
T ss_dssp EEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEE-ECSSSBGGGHHHHHHHHHHTTCCT
T ss_pred EEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEE-EecCCCCCCChHHHHHHHHcCCCC
Confidence 45777665443322 1111222 2345678999999999 99999997554 44333211 111222333333210
Q ss_pred CCCCceeeccccchhhhHHhHHHHHHHHHHHHHHhCc
Q 011989 385 TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 421 (473)
Q Consensus 385 ~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 421 (473)
..|...+ ...+++|+..+..+...++.|.
T Consensus 91 ---~~p~~~v-----~~aCasg~~Al~~A~~~I~~G~ 119 (393)
T 1afw_A 91 ---STPFVAL-----NRQCSSGLTAVNDIANKIKVGQ 119 (393)
T ss_dssp ---TSCEEEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred ---CceEEEE-----cCcCHHHHHHHHHHHHHHHCCC
Confidence 1232222 3346688888888888888764
No 128
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=44.77 E-value=25 Score=35.07 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC-CCHHHHHHHHHHhh
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFS 381 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~ 381 (473)
-...|.+++|+++|++|+|||+|.+- |-|+. ..+.-+..+...++
T Consensus 57 ma~~Aa~~al~~a~i~~~~Id~ii~a-T~t~~~~~ps~a~~v~~~l~ 102 (460)
T 2wya_A 57 LCLTVVQRLMERIQLPWDSVGRLEVG-TETIIDKSKAVKTVLMELFQ 102 (460)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEEE-CSCCSCSSSCHHHHHGGGTG
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCCchHHHHHHHHh
Confidence 45678999999999999999988763 44432 22333334444444
No 129
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=44.32 E-value=21 Score=33.84 Aligned_cols=29 Identities=14% Similarity=0.280 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEE-cCCCC
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNA-HATST 365 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~-hgtgt 365 (473)
+..+++++|+++|++++|||.|-. .|.|.
T Consensus 51 l~~~i~~~L~~agi~~~did~Ia~~~GPG~ 80 (330)
T 2ivn_A 51 MKPLLRKALSEAGVSLDDIDVIAFSQGPGL 80 (330)
T ss_dssp HHHHHHHHHHHHTCCTTTCCEEEEEEESSC
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCCc
Confidence 446899999999999999999875 56664
No 130
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=42.98 E-value=46 Score=33.33 Aligned_cols=80 Identities=11% Similarity=0.096 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEcCCCCCC-CCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHH
Q 011989 335 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 413 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~ 413 (473)
.-...|+++||+++|++++|||++.+ +|.|+. ..+.-...+.+.++.-.. ..++... + ...+++|+..|..+
T Consensus 75 ~La~~Aa~~aL~~agi~~~dId~li~-~T~t~~~~~ps~a~~v~~~L~~lG~-~~~~~~d----v-~~aC~gg~~AL~~A 147 (478)
T 2p8u_A 75 SLCMTVVQNLMERNNLSYDCIGRLEV-GTETIIDKSKSVKTNLMQLFEESGN-TDIEGID----T-TNACYGGTAAVFNA 147 (478)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEE-ECSCCSCSSSCHHHHHGGGTTTTTC-CCCBCCE----E-ESGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EccCCcccCccHHHHHHHHHhhcCC-CCceEEE----E-cchhHHHHHHHHHH
Confidence 44578999999999999999999885 344432 112122223333332100 1122111 1 23455667777777
Q ss_pred HHHHHhCc
Q 011989 414 VLAIHHGV 421 (473)
Q Consensus 414 ~~~l~~~~ 421 (473)
...++.+.
T Consensus 148 ~~~i~sg~ 155 (478)
T 2p8u_A 148 VNWIESSS 155 (478)
T ss_dssp HHHHTSTT
T ss_pred HHHHHcCC
Confidence 77777654
No 131
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=41.53 E-value=34 Score=37.58 Aligned_cols=77 Identities=12% Similarity=-0.026 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhHHhHHHHHHHHHHHH
Q 011989 337 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 416 (473)
Q Consensus 337 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~ 416 (473)
...|+++||+++|++++|||.+.... .+...-+.-+.-+...++... ...+...+ ...+++|+..|..+...
T Consensus 693 a~~Aa~~AL~~agl~~~dId~ii~~t-~~~~~~p~~a~~v~~~lGl~~--~~~~~~~v-----~~aCsg~~~Al~~A~~~ 764 (979)
T 3tsy_A 693 GKEAALKALKEWGQPKSKITHLVFCT-TSGVEMPGADYKLANLLGLEP--SVRRVMLY-----HQGCYAGGTVLRTAKDL 764 (979)
T ss_dssp HHHHHHHHHHHHCSCGGGCCEEEEEE-SSCCCSSCHHHHHHHHHTCCT--TCEEEEEE-----SCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEEe-eCCCCCCcHHHHHHHHcCCCc--ccEEEeee-----ccccHhHHHHHHHHHHH
Confidence 35688999999999999999977643 222222223344555565431 11122222 23466778888888888
Q ss_pred HHhCc
Q 011989 417 IHHGV 421 (473)
Q Consensus 417 l~~~~ 421 (473)
++.|.
T Consensus 765 i~sG~ 769 (979)
T 3tsy_A 765 AENNA 769 (979)
T ss_dssp HHTST
T ss_pred HHhCC
Confidence 88774
No 132
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=39.87 E-value=65 Score=31.34 Aligned_cols=22 Identities=27% Similarity=0.290 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcc
Q 011989 335 KGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId 356 (473)
+-...+.++||++||++++|||
T Consensus 76 ~l~l~Aa~~AL~dAGl~~~~id 97 (413)
T 3o04_A 76 HYAIASAEMAVQDSGLVIDDSN 97 (413)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHHHcCCChhHcC
Confidence 3456788999999999999998
No 133
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=37.27 E-value=41 Score=29.97 Aligned_cols=65 Identities=9% Similarity=0.065 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEE-cCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhH
Q 011989 334 GKGAILAMTRALKQSGLQSHQVDYVNA-HATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLL 402 (473)
Q Consensus 334 ~~~~~~a~~~al~~agl~~~dId~v~~-hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~ 402 (473)
.+.+...++++|+++|++++|||.|-+ -|.|.-.+=.+-....+.+ ... ..+|+..+...-+|..
T Consensus 35 ~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~l-a~~---~~~Pl~~V~~l~a~a~ 100 (231)
T 2gel_A 35 TQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGL-ALG---ANLPMIGVSTLATMAQ 100 (231)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHH-HHT---TTCCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHH-HHH---cCCCEEEeccHHHHHH
Confidence 455788999999999999999998765 6676655433333222222 211 2477777766666654
No 134
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=33.30 E-value=1.2e+02 Score=28.31 Aligned_cols=22 Identities=18% Similarity=0.217 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCC
Q 011989 131 AYALCAADEALHDAKWLPSDQG 152 (473)
Q Consensus 131 ~la~~aa~~Al~dAgl~~~~~~ 152 (473)
+....+.+++|+++|++++|++
T Consensus 224 ~~~~~~i~~aL~~agl~~~did 245 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLH 245 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCS
T ss_pred HHHHHHHHHHHHHcCCCHHHCC
Confidence 4556788999999999877664
No 135
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=33.29 E-value=87 Score=30.58 Aligned_cols=22 Identities=27% Similarity=0.398 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcc
Q 011989 335 KGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId 356 (473)
+-...++++||++||++++|||
T Consensus 90 ~l~l~aa~~AL~dAGl~~~~i~ 111 (427)
T 3ho9_A 90 QYGIVAGVQAMQDSGLEITEEN 111 (427)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHHHCCCCccccc
Confidence 3456788999999999999987
No 136
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=31.61 E-value=36 Score=32.80 Aligned_cols=27 Identities=19% Similarity=0.224 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcC
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHA 362 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hg 362 (473)
...+++++.+++++++++|||.|-.||
T Consensus 69 ~~a~av~~~l~~~~~~~~~Id~IGsHG 95 (371)
T 3qbx_A 69 LAAQGVRELLLQQQMSPDEVRAIGSHG 95 (371)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCcccccEEEeCC
Confidence 345788999999999999999999997
No 137
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=30.13 E-value=1.7e+02 Score=28.43 Aligned_cols=23 Identities=26% Similarity=0.005 Sum_probs=19.0
Q ss_pred hhHHhHHHHHHHHHHHHHHhCcc
Q 011989 400 HLLGAAGAVEAIFAVLAIHHGVA 422 (473)
Q Consensus 400 h~~~AsG~~~li~~~~~l~~~~i 422 (473)
.+.++||+..+..+...|+.|..
T Consensus 175 ~taCsS~l~Al~~A~~~I~~G~~ 197 (428)
T 3kzu_A 175 VTACATGTHAIGDAARLIAFGDA 197 (428)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSC
T ss_pred cCccHHHHHHHHHHHHHHHCCCC
Confidence 45678999999999999998863
No 138
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=29.49 E-value=1.4e+02 Score=26.08 Aligned_cols=65 Identities=18% Similarity=0.204 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhh-hhhHHHHHHHHhcCC
Q 011989 131 AYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI-LINMASGHVSMKYGF 209 (473)
Q Consensus 131 ~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~ia~~lgl 209 (473)
+..+..+.++|+++|++..+++ .|.++.+.|.+ ++. ..-..+.-++..+++
T Consensus 37 ~~L~p~i~~~L~~a~~~~~dld-----~Iav~~GPGsf-----------------------TglRig~~~AkgLa~~~~i 88 (213)
T 3r6m_A 37 KKVLPMVDEVLKEAGLTLQDLD-----ALAFGRGPGSF-----------------------TGVRIGIGIAQGLAFGAEL 88 (213)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCS-----EEEEEEESSCH-----------------------HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCHHHcc-----EEEEecCCCch-----------------------hhHHHHHHHHHHHHHHhCC
Confidence 4445788999999999988887 77777655443 222 233456667777766
Q ss_pred CCCeeeecCCcchHHHHHHHH
Q 011989 210 QGPNHAAVTACATGAHSIGDA 230 (473)
Q Consensus 210 ~Gp~~~v~~acasg~~Al~~A 230 (473)
|.+.|+ .+.++...
T Consensus 89 --Pl~gVs-----tL~a~a~~ 102 (213)
T 3r6m_A 89 --PMIGVS-----TLAAMAQA 102 (213)
T ss_dssp --CEEEEE-----HHHHHHHH
T ss_pred --CEEEEc-----CHHHHHHh
Confidence 777774 46666544
No 139
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=28.15 E-value=1.6e+02 Score=28.64 Aligned_cols=23 Identities=17% Similarity=0.254 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcc
Q 011989 334 GKGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 334 ~~~~~~a~~~al~~agl~~~dId 356 (473)
..-...++++||+++|+++++||
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~ 116 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALN 116 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSC
T ss_pred HHHHHHHHHHHHHHcCCChhhcC
Confidence 34456789999999999999987
No 140
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=27.12 E-value=2.6e+02 Score=27.24 Aligned_cols=23 Identities=26% Similarity=0.273 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcc
Q 011989 334 GKGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 334 ~~~~~~a~~~al~~agl~~~dId 356 (473)
..-...++++||++||+++++||
T Consensus 99 ~~l~l~aa~~AL~dAGl~~~~i~ 121 (437)
T 2gqd_A 99 TQYAIVAAREAVKDAQLDINENT 121 (437)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHHHHcCCCccccC
Confidence 34456789999999999999987
No 141
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=26.89 E-value=2e+02 Score=27.76 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcc
Q 011989 335 KGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId 356 (473)
+-...++++||+++|+++++||
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~ 100 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELN 100 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHHHcCCChhhcC
Confidence 3456789999999999999988
No 142
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=26.83 E-value=38 Score=32.60 Aligned_cols=27 Identities=15% Similarity=0.231 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEcC
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAHA 362 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~hg 362 (473)
...+++++.+++++++++|||.|-+||
T Consensus 73 ~~a~av~~~l~~~~~~~~~i~~IGsHG 99 (370)
T 3cqy_A 73 LFALAVNNLLAKTKIAKDEIIAIGSHG 99 (370)
T ss_dssp HHHHHHHHHHHHHCCCGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccccEEEeCC
Confidence 345789999999999999999999997
No 143
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=26.66 E-value=1.2e+02 Score=26.73 Aligned_cols=65 Identities=12% Similarity=0.076 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCChhhHHHHHHHHHHhccccCCCcchhhhhhhHHHHHHHHhcCCC
Q 011989 131 AYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQ 210 (473)
Q Consensus 131 ~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 210 (473)
+..+..+.++|+++|+++.+++ +|.++.+.|.+..+ ...-..+.-++..+++
T Consensus 47 e~L~p~i~~~L~~a~~~~~dld-----~Iav~~GPGsfTGl----------------------RiG~~~Ak~La~~~~i- 98 (218)
T 2a6a_A 47 EILPVVVKKLLDELDLKVKDLD-----VVGVGIGPGGLTGL----------------------RVGIATVVGLVSPYDI- 98 (218)
T ss_dssp GHHHHHHHHHHHHHTCCGGGCS-----EEEEECCSSCHHHH----------------------HHHHHHHHHHHGGGTC-
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCchHhH----------------------HHHHHHHHHHHHHcCC-
Confidence 4446678999999999988887 78887765543321 1233556667777765
Q ss_pred CCeeeecCCcchHHHHHHH
Q 011989 211 GPNHAAVTACATGAHSIGD 229 (473)
Q Consensus 211 Gp~~~v~~acasg~~Al~~ 229 (473)
|.+.|+ .+.++..
T Consensus 99 -Pl~gVs-----~l~a~a~ 111 (218)
T 2a6a_A 99 -PVAPLN-----SFEMTAK 111 (218)
T ss_dssp -CEEEEC-----HHHHHHH
T ss_pred -CEEEeC-----cHHHHHh
Confidence 777664 4555543
No 144
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=25.76 E-value=1.7e+02 Score=25.77 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCceeEEEecCCCCh
Q 011989 131 AYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSI 168 (473)
Q Consensus 131 ~la~~aa~~Al~dAgl~~~~~~~~~~~gvivg~~~g~~ 168 (473)
+.....+.++|+++|+++.|++ .|.++...|.+
T Consensus 36 ~~l~~~i~~~L~~a~~~~~did-----~Iav~~GPGsf 68 (231)
T 2gel_A 36 QRILPMVQEILAASGASLNEID-----ALAFGRGPGSF 68 (231)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCS-----EEEEECCSSCH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCChh
Confidence 3456788999999999988887 77887755543
No 145
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=25.23 E-value=1.6e+02 Score=29.01 Aligned_cols=23 Identities=26% Similarity=0.003 Sum_probs=18.9
Q ss_pred hhHHhHHHHHHHHHHHHHHhCcc
Q 011989 400 HLLGAAGAVEAIFAVLAIHHGVA 422 (473)
Q Consensus 400 h~~~AsG~~~li~~~~~l~~~~i 422 (473)
.+.++||+..+..+...|+.|..
T Consensus 190 ~~aCsS~l~Al~~A~~~I~~G~~ 212 (451)
T 4ddo_A 190 VTACAASVQAIGDAMRMIRTGEA 212 (451)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTSC
T ss_pred cCccHHHHHHHHHHHHHHHCCCC
Confidence 45578999999999999998863
No 146
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=25.05 E-value=33 Score=35.25 Aligned_cols=24 Identities=29% Similarity=0.322 Sum_probs=22.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEc
Q 011989 338 ILAMTRALKQSGLQSHQVDYVNAH 361 (473)
Q Consensus 338 ~~a~~~al~~agl~~~dId~v~~h 361 (473)
..+++.+|+++|++++|||+|-..
T Consensus 53 ~~AI~~cL~~AGi~~~DID~Va~~ 76 (576)
T 3ven_A 53 VQAAAFCLAQAGLTVDDLDAVAFG 76 (576)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEES
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEE
Confidence 678999999999999999999865
No 147
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=24.09 E-value=1.2e+02 Score=29.47 Aligned_cols=23 Identities=17% Similarity=-0.146 Sum_probs=19.5
Q ss_pred hhHHhHHHHHHHHHHHHHHhCcc
Q 011989 400 HLLGAAGAVEAIFAVLAIHHGVA 422 (473)
Q Consensus 400 h~~~AsG~~~li~~~~~l~~~~i 422 (473)
.+.++||+..+..+...|+.|..
T Consensus 179 ~~aCsSgl~Ai~~A~~~I~~G~~ 201 (428)
T 3mqd_A 179 SSACATSNHCIGNAYEMIQYGKQ 201 (428)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSC
T ss_pred cCccHHHHHHHHHHHHHHHcCCC
Confidence 45678999999999999998864
No 148
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=23.51 E-value=1.6e+02 Score=28.39 Aligned_cols=22 Identities=32% Similarity=0.530 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcc
Q 011989 335 KGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId 356 (473)
.-...++++||+++|+++++||
T Consensus 73 ~l~~~aa~~AL~dAGl~~~~id 94 (408)
T 1j3n_A 73 QYALIAAQLALEDAGLKPEDLD 94 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGSC
T ss_pred HHHHHHHHHHHHHcCCCccccC
Confidence 4456788999999999999987
No 149
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=23.42 E-value=1.7e+02 Score=28.18 Aligned_cols=23 Identities=17% Similarity=0.183 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcc
Q 011989 334 GKGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 334 ~~~~~~a~~~al~~agl~~~dId 356 (473)
.+-...++++||+++|+++++||
T Consensus 80 ~~l~l~aa~~AL~dAGl~~~~id 102 (415)
T 1tqy_B 80 TRLALTAADWALQDAKADPESLT 102 (415)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGSC
T ss_pred HHHHHHHHHHHHHHcCCCccccC
Confidence 34456788999999999999887
No 150
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=23.31 E-value=63 Score=30.57 Aligned_cols=30 Identities=17% Similarity=0.283 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEc-CCCC
Q 011989 336 GAILAMTRALKQSGLQSHQVDYVNAH-ATST 365 (473)
Q Consensus 336 ~~~~a~~~al~~agl~~~dId~v~~h-gtgt 365 (473)
.+..+++++|+++|++++|||.|-.. |.|.
T Consensus 55 ~l~~~i~~~L~~ag~~~~did~Iav~~gPG~ 85 (334)
T 3eno_A 55 VIDTVISRALEKAKISIHDIDLIGFSMGPGL 85 (334)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSSSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCC
Confidence 45678999999999999999997654 4443
No 151
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=22.45 E-value=1.9e+02 Score=28.20 Aligned_cols=23 Identities=26% Similarity=0.098 Sum_probs=19.0
Q ss_pred hhHHhHHHHHHHHHHHHHHhCcc
Q 011989 400 HLLGAAGAVEAIFAVLAIHHGVA 422 (473)
Q Consensus 400 h~~~AsG~~~li~~~~~l~~~~i 422 (473)
.+.++||+..+..+...|+.|..
T Consensus 185 ~taCsS~l~Al~~A~~~I~~G~~ 207 (438)
T 2iwz_A 185 STACTTGAHAVGDSFRFIAHGDA 207 (438)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTSC
T ss_pred cCchhHHHHHHHHHHHHHHcCCC
Confidence 44678999999999999998853
No 152
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=21.76 E-value=1.5e+02 Score=28.79 Aligned_cols=22 Identities=27% Similarity=0.386 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcc
Q 011989 335 KGAILAMTRALKQSGLQSHQVD 356 (473)
Q Consensus 335 ~~~~~a~~~al~~agl~~~dId 356 (473)
.-...++++||+++|+++++||
T Consensus 75 ~l~l~aa~~AL~dAG~~~~~i~ 96 (424)
T 1tqy_A 75 QFAVACAREAFAASGLDPDTLD 96 (424)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCC
T ss_pred HHHHHHHHHHHHHCCCCchhcC
Confidence 3456788999999999999997
No 153
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=20.82 E-value=1.3e+02 Score=26.40 Aligned_cols=65 Identities=12% Similarity=0.135 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEE-EcCCCCCCCCHHHHHHHHHHhhcccCCCCceeeccccchhhhH
Q 011989 334 GKGAILAMTRALKQSGLQSHQVDYVN-AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLL 402 (473)
Q Consensus 334 ~~~~~~a~~~al~~agl~~~dId~v~-~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~ 402 (473)
.+.+...++++|+++|+++.|||.|- .-|.|.-.+=.+-....+.+--. ..+|+..+...-+|..
T Consensus 36 s~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~----~~iPl~gVstL~a~a~ 101 (213)
T 3r6m_A 36 TKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFG----AELPMIGVSTLAAMAQ 101 (213)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHH----TTCCEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHH----hCCCEEEEcCHHHHHH
Confidence 45677899999999999999999854 56666654333333322222211 2467777666555543
Done!