BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011991
(473 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 143/258 (55%), Gaps = 14/258 (5%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM 260
G+ A+W+G+ V VKIL E ER+N F E+ I+++ RHPN+V F+GAVTQ +
Sbjct: 51 GTVHRAEWHGSDVAVKIL-MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 261 MIVLEYHAKGDLASYLQKKG---RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
IV EY ++G L L K G +L + L A D+A+GMNYLH P PI+H DLK
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSP 168
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+L+D +K+ FGL RL KA ++APE+ ++E + D
Sbjct: 169 NLLVDKKYTVKVCDFGLSRL------KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDV 222
Query: 378 YSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPK 437
YSFG+IL+E+ QP+ P +VV + + KR L+I R+ P + +IE CW +
Sbjct: 223 YSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR--LEI-PRNLNPQVAAIIEGCWTNE 279
Query: 438 PVIRPNFNEIIARLDRIV 455
P RP+F I+ L ++
Sbjct: 280 PWKRPSFATIMDLLRPLI 297
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 152/280 (54%), Gaps = 18/280 (6%)
Query: 179 EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTI 238
++P +LN E K + G+ A+W+G+ V VKIL E ER+N F E+ I
Sbjct: 33 DIPWCDLNIKE----KIGAGSFGTVHRAEWHGSDVAVKIL-MEQDFHAERVNEFLREVAI 87
Query: 239 VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKG---RLSPSKVLRFALDLA 295
+++ RHPN+V F+GAVTQ + IV EY ++G L L K G +L + L A D+A
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 296 RGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHID 355
+GMNYLH P PI+H +LK N+L+D +K+ FGL RL KA
Sbjct: 148 KGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL------KASTFLSSKSAA 200
Query: 356 PANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPL 415
++APE+ ++E + D YSFG+IL+E+ QP+ P +VV + + KR L
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR--L 258
Query: 416 KIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+I R+ P + +IE CW +P RP+F I+ L ++
Sbjct: 259 EI-PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 29/275 (10%)
Query: 189 ELQVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHP 245
E++V + G +G++ V AKW V +K ++ ES + AF EL + + HP
Sbjct: 10 EIEVEEVVG--RGAFGVVCKAKWRAKDVAIKQIESESER-----KAFIVELRQLSRVNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRL---SPSKVLRFALDLARGMNYLH 302
N+V+ GA P+ +V+EY G L + L L + + + + L ++G+ YLH
Sbjct: 63 NIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQ-LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYV 361
+P +IH DLKP N+LL GG LKI FG I +++ + ++
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---------TACDIQTHMTNNKGSAAWM 171
Query: 362 APEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHP-KPPEEVVKLMCCEGKRPPLKIKAR 420
APE+++ + D +S+G+IL+E+I +PF P + G RPPL +
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL---IK 228
Query: 421 SYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ P ++ L+ CW P RP+ EI+ + ++
Sbjct: 229 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 29/275 (10%)
Query: 189 ELQVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHP 245
E++V + G +G++ V AKW V +K ++ ES + AF EL + + HP
Sbjct: 9 EIEVEEVVG--RGAFGVVCKAKWRAKDVAIKQIESESER-----KAFIVELRQLSRVNHP 61
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRL---SPSKVLRFALDLARGMNYLH 302
N+V+ GA P+ +V+EY G L + L L + + + + L ++G+ YLH
Sbjct: 62 NIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQ-LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYV 361
+P +IH DLKP N+LL GG LKI FG I +++ + ++
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---------TACDIQTHMTNNKGSAAWM 170
Query: 362 APEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHP-KPPEEVVKLMCCEGKRPPLKIKAR 420
APE+++ + D +S+G+IL+E+I +PF P + G RPPL +
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL---IK 227
Query: 421 SYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ P ++ L+ CW P RP+ EI+ + ++
Sbjct: 228 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 184 ELNPLELQVRKADGITK-GSYQVAKWNGTKVWVKILDKESHKD-PERINAFTHELTIVEK 241
E++ EL + + GI G A W G +V VK + +D + I E +
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYL 301
+HPN++ G + + +V+E+ G L L K R+ P ++ +A+ +ARGMNYL
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYL 121
Query: 302 HECKPDPIIHCDLKPKNILL----DNGGQ----LKISGFGLLRLQYISPEKAKIVFPVSH 353
H+ PIIH DLK NIL+ +NG LKI+ FGL R + + + +
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA------- 174
Query: 354 IDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRP 413
A ++APE+ + F + D +S+G++L+E++ G PF V +
Sbjct: 175 -AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL 233
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P+ + P +L+E+CW+P P RP+F I+ +L I
Sbjct: 234 PIP---STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 140/278 (50%), Gaps = 28/278 (10%)
Query: 183 YELNPLELQVRKADGITK-GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK 241
+ LN EL++ + G + G + + G KV VK + K+ AF E +++ +
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVMTQ 70
Query: 242 ARHPNVVQFVGAVTQNIP-MMIVLEYHAKGDLASYLQKKGR--LSPSKVLRFALDLARGM 298
RH N+VQ +G + + + IV EY AKG L YL+ +GR L +L+F+LD+ M
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130
Query: 299 NYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPAN 358
YL + + +H DL +N+L+ K+S FGL + + + K+ PV
Sbjct: 131 EYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVK------ 179
Query: 359 LYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKI 417
+ APE + ++F D +SFG++L+E+ G P+ P ++VV + K+
Sbjct: 180 -WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----EKGYKM 233
Query: 418 KA-RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
A PP + E+++ CW +RP+F ++ +L+ I
Sbjct: 234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 162/320 (50%), Gaps = 26/320 (8%)
Query: 149 GNVEVYNILKARGAKVPKTKRTPMTVANP-REVPEY--ELNPLELQVRKADG------IT 199
G+ E+Y K G K T P T +P R V ++ EL+ +++ + G +
Sbjct: 4 GDEELYFHFKFPGTK---TYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVC 60
Query: 200 KGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G ++ V +K L K + + +R + F E +I+ + HPNVV G VT+ P
Sbjct: 61 SGRLKLPGKRDVAVAIKTL-KVGYTEKQRRD-FLCEASIMGQFDHPNVVHLEGVVTRGKP 118
Query: 260 MMIVLEYHAKGDLASYLQKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKN 318
+MIV+E+ G L ++L+K G+ + +++ +A GM YL + +H DL +N
Sbjct: 119 VMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMG---YVHRDLAARN 175
Query: 319 ILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAY 378
IL+++ K+S FGL R+ PE V+ + + APE + +F + D +
Sbjct: 176 ILVNSNLVCKVSDFGLSRVIEDDPEA---VYTTTGGKIPVRWTAPEAIQYRKFTSASDVW 232
Query: 379 SFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPK 437
S+G++++E++ G +P+ ++V+K + EG R P + P L +L+ +CW +
Sbjct: 233 SYGIVMWEVMSYGERPYWDMSNQDVIKAI-EEGYRLPAPMDC---PAGLHQLMLDCWQKE 288
Query: 438 PVIRPNFNEIIARLDRIVCN 457
RP F +I+ LD+++ N
Sbjct: 289 RAERPKFEQIVGILDKMIRN 308
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 140/278 (50%), Gaps = 28/278 (10%)
Query: 183 YELNPLELQVRKADGITK-GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK 241
+ LN EL++ + G + G + + G KV VK + K+ AF E +++ +
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVMTQ 55
Query: 242 ARHPNVVQFVGAVTQNIP-MMIVLEYHAKGDLASYLQKKGR--LSPSKVLRFALDLARGM 298
RH N+VQ +G + + + IV EY AKG L YL+ +GR L +L+F+LD+ M
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 299 NYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPAN 358
YL + + +H DL +N+L+ K+S FGL + + + K+ PV
Sbjct: 116 EYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVK------ 164
Query: 359 LYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKI 417
+ APE + ++F D +SFG++L+E+ G P+ P ++VV + K+
Sbjct: 165 -WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----EKGYKM 218
Query: 418 KA-RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
A PP + E+++ CW +RP+F ++ +L+ I
Sbjct: 219 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 28/278 (10%)
Query: 183 YELNPLELQVRKADGITK-GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK 241
+ LN EL++ + G + G + + G KV VK + K+ AF E +++ +
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVMTQ 61
Query: 242 ARHPNVVQFVGAVTQNIP-MMIVLEYHAKGDLASYLQKKGR--LSPSKVLRFALDLARGM 298
RH N+VQ +G + + + IV EY AKG L YL+ +GR L +L+F+LD+ M
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 121
Query: 299 NYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPAN 358
YL + + +H DL +N+L+ K+S FGL + + + K+ PV
Sbjct: 122 EYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVK------ 170
Query: 359 LYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKI 417
+ APE + F D +SFG++L+E+ G P+ P ++VV + K+
Sbjct: 171 -WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----EKGYKM 224
Query: 418 KA-RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
A PP + E+++ CW +RP+F ++ +L+ I
Sbjct: 225 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 37/272 (13%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
TKV VK+L ++ + + ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +K
Sbjct: 61 TKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 118
Query: 270 GDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
G+L YLQ + +LS ++ A +ARGM YL K IH D
Sbjct: 119 GNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRD 175
Query: 314 LKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEE 370
L +N+L+ +KI+ FGL R + +I K PV ++APE +
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVK-------WMAPEALFDRI 228
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++L+E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHR---MDKPSNCTNELYMM 284
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW P RP F +++ LDRIV S Q
Sbjct: 285 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 316
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 169/357 (47%), Gaps = 49/357 (13%)
Query: 113 ACEGHVEVVKLLL-SKKANIDARDRWGSTAAADAKYYGN----VEVYNILKARG--AKVP 165
+CEG VE +++ + K +ID + Y+ N VE Y A G ++
Sbjct: 121 SCEGKVEHYRIMYHASKLSID-----------EEVYFENLMQLVEHYTT-DADGLCTRLI 168
Query: 166 KTKRTPMTVANPREV--PEYELNPLELQVRKADGITK-GSYQVAKWNGTKVWVKILDKES 222
K K TVA E + LN EL++ + G + G + + G KV VK +
Sbjct: 169 KPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI---- 224
Query: 223 HKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP-MMIVLEYHAKGDLASYLQKKGR 281
K+ AF E +++ + RH N+VQ +G + + + IV EY AKG L YL+ +GR
Sbjct: 225 -KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 283
Query: 282 --LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY 339
L +L+F+LD+ M YL + + +H DL +N+L+ K+S FGL +
Sbjct: 284 SVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340
Query: 340 ISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKP 398
+ + K+ PV + APE + ++F D +SFG++L+E+ G P+ P
Sbjct: 341 STQDTGKL--PVK-------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
Query: 399 PEEVVKLMCCEGKRPPLKIKA-RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
++VV + K+ A PP + ++++ CW RP F ++ +L+ I
Sbjct: 392 LKDVVPRV-----EKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 38/291 (13%)
Query: 177 PREVPEYELNPLELQVRKADGITK-GSYQVAKW-NGTKVWVKILDKESHKDPERINAFTH 234
PR ++P EL + G + G + W N KV +K + + S + + F
Sbjct: 16 PRGSLHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD----FIE 71
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALD 293
E ++ K HP +VQ G + P+ +V E+ G L+ YL+ ++G + +L LD
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 131
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVF 349
+ GM YL E +IH DL +N L+ +K+S FG+ R QY S K F
Sbjct: 132 VCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK--F 186
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCC 408
PV + +PE++ + D +SFG++++E+ EG P+ + EVV+
Sbjct: 187 PVK-------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE---- 235
Query: 409 EGKRPPLKIKARSYPPDLK-----ELIEECWDPKPVIRPNFNEIIARLDRI 454
+ R Y P L +++ CW +P RP F+ ++ +L I
Sbjct: 236 -----DISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADGITK------GSYQVAKWNGTKVWVK 216
+T P T +P + V E+ E++ +++ K G+ + G +V V +K
Sbjct: 4 RTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIK 63
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + D +R + F E +I+ + HPN++ G VT+ P+MI+ EY G L ++L
Sbjct: 64 TL-KAGYTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K GR + +++ + GM YL + +H DL +NIL+++ K+S FG+
Sbjct: 122 RKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + APE +F + D +S+G++++E++ G
Sbjct: 179 RVLEDDPEAAYTTRGGKIPIR-------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 231
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW + RP F +I+
Sbjct: 232 ERPYWDMSNQDVIKAI-EEGYRLPPPMDC-----PIALHQLMLDCWQKERSDRPKFGQIV 285
Query: 449 ARLDRIVCN 457
LD+++ N
Sbjct: 286 NMLDKLIRN 294
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 139/281 (49%), Gaps = 26/281 (9%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A ARGM+YLH
Sbjct: 83 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---A 138
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH----IDPANLYVA 362
IIH DLK NI L +KI FGL + EK++ + SH + + L++A
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGL------ATEKSR--WSGSHQFEQLSGSILWMA 190
Query: 363 PEIYKNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
PE+ + ++ + D Y+FG++LYE++ G P+ + + M G P K
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV 250
Query: 420 RSY-PPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
RS P +K L+ EC K RP+F I+A ++ + S
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARELS 291
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 123/232 (53%), Gaps = 20/232 (8%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GRLSPSKVLRF 290
F E +I+ + HPN++ G VT++ P+MIV EY G L ++L+K G+ + +++
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM 129
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV-- 348
++ GM YL + +H DL +NIL+++ K+S FGL R+ PE A
Sbjct: 130 LRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 349 --FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKL 405
P+ + APE +F + D +S+G++++E++ G +P+ ++V+K
Sbjct: 187 GKIPIR-------WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKA 239
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCN 457
+ EG R P + P L +L+ +CW + RP F+EI+ LD+++ N
Sbjct: 240 V-EEGYRLPSPMDC---PAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 37/272 (13%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
TKV VK+L ++ + + ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +K
Sbjct: 53 TKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 110
Query: 270 GDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
G+L YLQ + +LS ++ A +ARGM YL K IH D
Sbjct: 111 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRD 167
Query: 314 LKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEE 370
L +N+L+ +KI+ FGL R + +I K PV ++APE +
Sbjct: 168 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-------WMAPEALFDRI 220
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++L+E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 221 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMD---KPSNCTNELYMM 276
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW P RP F +++ LDRIV S Q
Sbjct: 277 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 308
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 37/272 (13%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
TKV VK+L ++ + + ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +K
Sbjct: 61 TKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 118
Query: 270 GDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
G+L YLQ + +LS ++ A +ARGM YL K IH D
Sbjct: 119 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRD 175
Query: 314 LKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEE 370
L +N+L+ +KI+ FGL R + +I K PV ++APE +
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-------WMAPEALFDRI 228
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++L+E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMD---KPSNCTNELYMM 284
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW P RP F +++ LDRIV S Q
Sbjct: 285 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 316
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 37/272 (13%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
TKV VK+L ++ + + ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +K
Sbjct: 50 TKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 107
Query: 270 GDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
G+L YLQ + +LS ++ A +ARGM YL K IH D
Sbjct: 108 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRD 164
Query: 314 LKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEE 370
L +N+L+ +KI+ FGL R + +I K PV ++APE +
Sbjct: 165 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-------WMAPEALFDRI 217
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++L+E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 218 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMD---KPSNCTNELYMM 273
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW P RP F +++ LDRIV S Q
Sbjct: 274 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 305
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 37/274 (13%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
TKV VK+L ++ + + ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +K
Sbjct: 61 TKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 118
Query: 270 GDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
G+L YLQ + +LS ++ A +ARGM YL K IH D
Sbjct: 119 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRD 175
Query: 314 LKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEE 370
L +N+L+ +KI+ FGL R + +I K PV ++APE +
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-------WMAPEALFDRI 228
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++L+E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMD---KPSNCTNELYMM 284
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQGW 463
+ +CW P RP F +++ LDRIV S Q +
Sbjct: 285 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEY 318
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 140/276 (50%), Gaps = 16/276 (5%)
Query: 182 EYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK 241
E E + + L R G + G+ KW+G V VKIL K PE+ AF +E+ ++ K
Sbjct: 32 EIEASEVMLSTRIGSG-SFGTVYKGKWHG-DVAVKIL-KVVDPTPEQFQAFRNEVAVLRK 88
Query: 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNY 300
RH N++ F+G +T++ + IV ++ L +L ++ + +++ A A+GM+Y
Sbjct: 89 TRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDY 147
Query: 301 LHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLY 360
LH IIH D+K NI L G +KI FGL ++ ++ P + L+
Sbjct: 148 LH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV----LW 200
Query: 361 VAPEIYK---NEEFDRSVDAYSFGLILYEMIEGVQPF-HPKPPEEVVKLMCCEGKRPPLK 416
+APE+ + N F D YS+G++LYE++ G P+ H ++++ ++ P L
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
Query: 417 IKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
++ P +K L+ +C RP F +I++ ++
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 37/272 (13%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
TKV VK+L ++ + + ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +K
Sbjct: 61 TKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 118
Query: 270 GDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
G+L YLQ + +LS ++ A +ARGM YL K IH D
Sbjct: 119 GNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRD 175
Query: 314 LKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEE 370
L +N+L+ +KI+ FGL R + +I K PV ++APE +
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-------WMAPEALFDRI 228
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++L+E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMD---KPSNCTNELYMM 284
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW P RP F +++ LDRIV S Q
Sbjct: 285 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 316
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 37/272 (13%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
TKV VK+L ++ + + ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +K
Sbjct: 54 TKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 111
Query: 270 GDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
G+L YLQ + +LS ++ A +ARGM YL K IH D
Sbjct: 112 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRD 168
Query: 314 LKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEE 370
L +N+L+ +KI+ FGL R + +I K PV ++APE +
Sbjct: 169 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-------WMAPEALFDRI 221
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++L+E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 222 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMD---KPSNCTNELYMM 277
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW P RP F +++ LDRIV S Q
Sbjct: 278 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 309
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 37/272 (13%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
TKV VK+L ++ + + ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +K
Sbjct: 102 TKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 159
Query: 270 GDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
G+L YLQ + +LS ++ A +ARGM YL K IH D
Sbjct: 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRD 216
Query: 314 LKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEE 370
L +N+L+ +KI+ FGL R + +I K PV ++APE +
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-------WMAPEALFDRI 269
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++L+E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHR---MDKPSNCTNELYMM 325
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW P RP F +++ LDRIV S Q
Sbjct: 326 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 37/272 (13%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
TKV VK+L ++ + + ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +K
Sbjct: 46 TKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 103
Query: 270 GDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
G+L YLQ + +LS ++ A +ARGM YL K IH D
Sbjct: 104 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRD 160
Query: 314 LKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEE 370
L +N+L+ +KI+ FGL R + +I K PV ++APE +
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-------WMAPEALFDRI 213
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++L+E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMD---KPSNCTNELYMM 269
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW P RP F +++ LDRIV S Q
Sbjct: 270 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 301
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L
Sbjct: 80 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 248 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 302 SILDKLIRN 310
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L
Sbjct: 80 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLA 194
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 248 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 302 SILDKLIRN 310
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 26/253 (10%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL 272
V +K L K + D +R + F E +I+ + HPN++ G VT+ P+MI+ EY G L
Sbjct: 45 VAIKTL-KAGYTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 102
Query: 273 ASYLQKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
++L+K GR + +++ + GM YL + +H DL +NIL+++ K+S
Sbjct: 103 DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSD 159
Query: 332 FGLLRLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM 387
FG+ R+ PE A P+ + APE +F + D +S+G++++E+
Sbjct: 160 FGMSRVLEDDPEAAYTTRGGKIPIR-------WTAPEAIAYRKFTSASDVWSYGIVMWEV 212
Query: 388 IE-GVQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNF 444
+ G +P+ ++V+K + EG R PP+ P L +L+ +CW + RP F
Sbjct: 213 MSYGERPYWDMSNQDVIKAI-EEGYRLPPPMDC-----PIALHQLMLDCWQKERSDRPKF 266
Query: 445 NEIIARLDRIVCN 457
+I+ LD+++ N
Sbjct: 267 GQIVNMLDKLIRN 279
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 137/277 (49%), Gaps = 26/277 (9%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T + IV ++ L +L + + K++ A ARGM+YLH
Sbjct: 83 LLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---A 138
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH----IDPANLYVA 362
IIH DLK NI L +KI FGL + EK++ + SH + + L++A
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGL------ATEKSR--WSGSHQFEQLSGSILWMA 190
Query: 363 PEIYKNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
PE+ + ++ + D Y+FG++LYE++ G P+ + + M G P K
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV 250
Query: 420 RSY-PPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
RS P +K L+ EC K RP+F I+A ++ +
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 18/277 (6%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 13 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 70
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A ARGM+YLH
Sbjct: 71 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---A 126
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
IIH DLK NI L +KI FGL ++ + + + L++APE+
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVK----SRWSGSHQFEQLSGSILWMAPEVI 182
Query: 367 KNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY- 422
+ ++ + D Y+FG++LYE++ G P+ + + M G P K RS
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 242
Query: 423 PPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
P +K L+ EC K RP+F I+A ++ + S
Sbjct: 243 PKRMKRLMAECLKKKRDERPSFPRILAEIEELARELS 279
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 25/246 (10%)
Query: 220 KESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK 279
K + D +R + F E +I+ + HPN++ G VT+ P+MI+ EY G L ++L+K
Sbjct: 45 KAGYTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN 103
Query: 280 -GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ 338
GR + +++ + GM YL + +H DL +NIL+++ K+S FG+ R+
Sbjct: 104 DGRFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
Query: 339 YISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQP 393
PE A P+ + APE +F + D +S+G++++E++ G +P
Sbjct: 161 EDDPEAAYTTRGGKIPIR-------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
Query: 394 FHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARL 451
+ ++V+K + EG R PP+ P L +L+ +CW + RP F +I+ L
Sbjct: 214 YWDMSNQDVIKAI-EEGYRLPPPMDC-----PIALHQLMLDCWQKERSDRPKFGQIVNML 267
Query: 452 DRIVCN 457
D+++ N
Sbjct: 268 DKLIRN 273
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 20 RTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L
Sbjct: 80 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 248 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 302 SILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 18 RTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 77
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L
Sbjct: 78 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 136 RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS 192
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 193 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 245
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 246 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 299
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 300 SILDKLIRN 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 20 RTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L
Sbjct: 80 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 248 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 302 SILDKLIRN 310
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 38/286 (13%)
Query: 185 LNPLELQVRKADGITK-GSYQVAKW-NGTKVWVKILDKESHKDPERINAFTHELTIVEKA 242
++P EL + G + G + W N KV +K + + + + + F E ++ K
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKL 59
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYL 301
HP +VQ G + P+ +V E+ G L+ YL+ ++G + +L LD+ GM YL
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 119
Query: 302 HECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPA 357
E +IH DL +N L+ +K+S FG+ R QY S K FPV
Sbjct: 120 EEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK--FPVK----- 169
Query: 358 NLYVAPEIYKNEEFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLK 416
+ +PE++ + D +SFG++++E+ EG P+ + EVV+ +
Sbjct: 170 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE---------DIS 218
Query: 417 IKARSYPPDLK-----ELIEECWDPKPVIRPNFNEIIARLDRIVCN 457
R Y P L +++ CW +P RP F+ ++ +L I +
Sbjct: 219 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 123/234 (52%), Gaps = 24/234 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GRLSPSKVLRF 290
F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L+K + + +++
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV-- 348
+A GM YL + +H DL +NIL+++ K+S FGL R+ PE A
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 349 --FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKL 405
P+ + +PE +F + D +S+G++L+E++ G +P+ ++V+K
Sbjct: 181 GKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 233
Query: 406 MCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCN 457
+ EG R PP+ P L +L+ +CW RP F +I++ LD+++ N
Sbjct: 234 V-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L
Sbjct: 80 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 248 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 302 SILDKLIRN 310
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 185 LNPLELQVRKADGITK-GSYQVAKW-NGTKVWVKILDKESHKDPERINAFTHELTIVEKA 242
++P EL + G + G + W N KV +K + + + + + F E ++ K
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKL 59
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYL 301
HP +VQ G + P+ +V E+ G L+ YL+ ++G + +L LD+ GM YL
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 119
Query: 302 HECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPA 357
E +IH DL +N L+ +K+S FG+ R QY S K FPV
Sbjct: 120 EEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK--FPVK----- 169
Query: 358 NLYVAPEIYKNEEFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLK 416
+ +PE++ + D +SFG++++E+ EG P+ + EVV+ +
Sbjct: 170 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE---------DIS 218
Query: 417 IKARSYPPDLK-----ELIEECWDPKPVIRPNFNEIIARLDRI 454
R Y P L +++ CW +P RP F+ ++ +L I
Sbjct: 219 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 123/234 (52%), Gaps = 24/234 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GRLSPSKVLRF 290
F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L+K + + +++
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 140
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV-- 348
+A GM YL + +H DL +NIL+++ K+S FGL R+ PE A
Sbjct: 141 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 349 --FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKL 405
P+ + +PE +F + D +S+G++L+E++ G +P+ ++V+K
Sbjct: 198 GKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 250
Query: 406 MCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCN 457
+ EG R PP+ P L +L+ +CW RP F +I++ LD+++ N
Sbjct: 251 V-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 136/282 (48%), Gaps = 38/282 (13%)
Query: 184 ELNPLELQVRKADGITK-GSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEK 241
EL E+ + K G + G ++ KW G V VK++ + S + E F E + K
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE----FFQEAQTMMK 59
Query: 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR-LSPSKVLRFALDLARGMNY 300
HP +V+F G ++ P+ IV EY + G L +YL+ G+ L PS++L D+ GM +
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAF 119
Query: 301 LHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDP 356
L + IH DL +N L+D +K+S FG+ R QY+S K FPV
Sbjct: 120 L---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK--FPVK---- 170
Query: 357 ANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPL 415
+ APE++ ++ D ++FG++++E+ G P+ EVV L +G R
Sbjct: 171 ---WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV-LKVSQGHRL-- 224
Query: 416 KIKARSYPPDLK-----ELIEECWDPKPVIRPNFNEIIARLD 452
Y P L +++ CW P RP F ++++ ++
Sbjct: 225 ------YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 185 LNPLELQVRKADGITK-GSYQVAKW-NGTKVWVKILDKESHKDPERINAFTHELTIVEKA 242
++P EL + G + G + W N KV +K + + + + + F E ++ K
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKL 57
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYL 301
HP +VQ G + P+ +V E+ G L+ YL+ ++G + +L LD+ GM YL
Sbjct: 58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 117
Query: 302 HECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPA 357
E +IH DL +N L+ +K+S FG+ R QY S K FPV
Sbjct: 118 EEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK--FPVK----- 167
Query: 358 NLYVAPEIYKNEEFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLK 416
+ +PE++ + D +SFG++++E+ EG P+ + EVV+ +
Sbjct: 168 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE---------DIS 216
Query: 417 IKARSYPPDLK-----ELIEECWDPKPVIRPNFNEIIARLDRI 454
R Y P L +++ CW +P RP F+ ++ +L I
Sbjct: 217 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 20 RTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L
Sbjct: 80 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 248 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 302 SILDKLIRN 310
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 185 LNPLELQVRKADGITK-GSYQVAKW-NGTKVWVKILDKESHKDPERINAFTHELTIVEKA 242
++P EL + G + G + W N KV +K + + + + + F E ++ K
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKL 62
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYL 301
HP +VQ G + P+ +V E+ G L+ YL+ ++G + +L LD+ GM YL
Sbjct: 63 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 122
Query: 302 HECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPA 357
E +IH DL +N L+ +K+S FG+ R QY S K FPV
Sbjct: 123 EEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK--FPVK----- 172
Query: 358 NLYVAPEIYKNEEFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLK 416
+ +PE++ + D +SFG++++E+ EG P+ + EVV+ +
Sbjct: 173 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE---------DIS 221
Query: 417 IKARSYPPDLK-----ELIEECWDPKPVIRPNFNEIIARLDRI 454
R Y P L +++ CW +P RP F+ ++ +L I
Sbjct: 222 TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV EY G L S+L
Sbjct: 80 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLG 194
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 248 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 302 SILDKLIRN 310
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 38/283 (13%)
Query: 185 LNPLELQVRKADGITK-GSYQVAKW-NGTKVWVKILDKESHKDPERINAFTHELTIVEKA 242
++P EL + G + G + W N KV +K + + + + + F E ++ K
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKL 60
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYL 301
HP +VQ G + P+ +V E+ G L+ YL+ ++G + +L LD+ GM YL
Sbjct: 61 SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 120
Query: 302 HECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPA 357
E +IH DL +N L+ +K+S FG+ R QY S K FPV
Sbjct: 121 EEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK--FPVK----- 170
Query: 358 NLYVAPEIYKNEEFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLK 416
+ +PE++ + D +SFG++++E+ EG P+ + EVV+ +
Sbjct: 171 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE---------DIS 219
Query: 417 IKARSYPPDLK-----ELIEECWDPKPVIRPNFNEIIARLDRI 454
R Y P L +++ CW +P RP F+ ++ +L I
Sbjct: 220 TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 123/240 (51%), Gaps = 34/240 (14%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E +I+ + HPN+++ G VT ++P+MI+ E+ G L S+L+ G+ + +++
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL--------QYISP 342
+A GM YL E +H DL +NIL+++ K+S FGL R Y S
Sbjct: 122 LRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 343 EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEE 401
KI P+ + APE +F + DA+S+G++++E++ G +P+ ++
Sbjct: 179 LGGKI--PIR-------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 229
Query: 402 VVKLMCCEGKRPPLKIKARSYPPD----LKELIEECWDPKPVIRPNFNEIIARLDRIVCN 457
V+ + + + PP PPD L +L+ +CW RP F ++++ LD+++ N
Sbjct: 230 VINAIEQDYRLPP--------PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 281
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 153/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV E G L S+L
Sbjct: 80 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLS 194
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 248 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 302 SILDKLIRN 310
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 153/309 (49%), Gaps = 35/309 (11%)
Query: 166 KTKRTPMTVANPRE-VPEY--ELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVK 216
+T P T +P + V E+ EL+ + + K G + G ++ V +K
Sbjct: 20 RTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL 276
L K + + +R + F E +I+ + HPN+++ G VT++ P+MIV E G L S+L
Sbjct: 80 TL-KVGYTEKQRRD-FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
Query: 277 QKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
+K + + +++ +A GM YL + +H DL +NIL+++ K+S FGL
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 336 RLQYISPEKAKIV----FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
R+ PE A P+ + +PE +F + D +S+G++L+E++ G
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+P+ ++V+K + EG R PP+ P L +L+ +CW RP F +I+
Sbjct: 248 ERPYWEMSNQDVIKAV-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 449 ARLDRIVCN 457
+ LD+++ N
Sbjct: 302 SILDKLIRN 310
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 122/234 (52%), Gaps = 24/234 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GRLSPSKVLRF 290
F E +I+ + HPN+++ G VT++ P+MIV E G L S+L+K + + +++
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV-- 348
+A GM YL + +H DL +NIL+++ K+S FGL R+ PE A
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 349 --FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKL 405
P+ + +PE +F + D +S+G++L+E++ G +P+ ++V+K
Sbjct: 181 GKIPIR-------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 233
Query: 406 MCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCN 457
+ EG R PP+ P L +L+ +CW RP F +I++ LD+++ N
Sbjct: 234 V-DEGYRLPPPMDC-----PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 128/256 (50%), Gaps = 26/256 (10%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
+++V I +S ++ F E +I+ + HPNV+ G VT++ P+MI+ E+ G
Sbjct: 61 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 120
Query: 272 LASYL-QKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKIS 330
L S+L Q G+ + +++ +A GM YL + +H DL +NIL+++ K+S
Sbjct: 121 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVS 177
Query: 331 GFGLLRL--------QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGL 382
FGL R Y S KI P+ + APE + +F + D +S+G+
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKI--PIR-------WTAPEAIQYRKFTSASDVWSYGI 228
Query: 383 ILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIR 441
+++E++ G +P+ ++V+ + + + PP P L +L+ +CW R
Sbjct: 229 VMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP----PMDCPSALHQLMLDCWQKDRNHR 284
Query: 442 PNFNEIIARLDRIVCN 457
P F +I+ LD+++ N
Sbjct: 285 PKFGQIVNTLDKMIRN 300
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 26/274 (9%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 95 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 150
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH----IDPANLYVA 362
IIH DLK NI L +KI FGL + EK++ + SH + + L++A
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGL------ATEKSR--WSGSHQFEQLSGSILWMA 202
Query: 363 PEIYKNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
PE+ + ++ + D Y+FG++LYE++ G P+ + + M G P K
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 262
Query: 420 RSY-PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
RS P +K L+ EC K RP F +I+A ++
Sbjct: 263 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 26/274 (9%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 29 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 86
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 87 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 142
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH----IDPANLYVA 362
IIH DLK NI L +KI FGL + EK++ + SH + + L++A
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGL------ATEKSR--WSGSHQFEQLSGSILWMA 194
Query: 363 PEIYKNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
PE+ + ++ + D Y+FG++LYE++ G P+ + + M G P K
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 254
Query: 420 RSY-PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
RS P +K L+ EC K RP F +I+A ++
Sbjct: 255 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
N TKV VK L + + AF E +++ +H +V+ VT+ P+ I+ EY A
Sbjct: 36 NSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMA 91
Query: 269 KGDLASYLQ--KKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
KG L +L+ + G++ K++ F+ +A GM Y+ IH DL+ N+L+
Sbjct: 92 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLM 148
Query: 327 LKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGL 382
KI+ FGL R+ +Y + E AK FP+ + APE F D +SFG+
Sbjct: 149 CKIADFGLARVIEDNEYTAREGAK--FPIK-------WTAPEAINFGCFTIKSDVWSFGI 199
Query: 383 ILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRP 442
+LYE++ + +P V +G R P + + P +L ++++ CW K RP
Sbjct: 200 LLYEIVTYGKIPYPGRTNADVMTALSQGYRMP---RVENCPDELYDIMKMCWKEKAEERP 256
Query: 443 NFNEIIARLDRIVCNCSKQ 461
F+ + + LD Q
Sbjct: 257 TFDYLQSVLDDFYTATEGQ 275
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 14/245 (5%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL 272
V +K L K + + +R++ F E I+ + H N+++ G +++ PMMI+ EY G L
Sbjct: 76 VAIKTL-KAGYTEKQRVD-FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL 133
Query: 273 ASYLQKK-GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
+L++K G S +++ +A GM YL +H DL +NIL+++ K+S
Sbjct: 134 DKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSD 190
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEG 390
FGL R+ PE + S + APE +F + D +SFG++++E M G
Sbjct: 191 FGLSRVLEDDPEA---TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG 247
Query: 391 VQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
+P+ EV+K + +G R P + P + +L+ +CW + RP F +I++
Sbjct: 248 ERPYWELSNHEVMKAI-NDGFRLPTPMDC---PSAIYQLMMQCWQQERARRPKFADIVSI 303
Query: 451 LDRIV 455
LD+++
Sbjct: 304 LDKLI 308
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 26/274 (9%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 67 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 122
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH----IDPANLYVA 362
IIH DLK NI L +KI FGL + EK++ + SH + + L++A
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGL------ATEKSR--WSGSHQFEQLSGSILWMA 174
Query: 363 PEIYKNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
PE+ + ++ + D Y+FG++LYE++ G P+ + + M G P K
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 234
Query: 420 RSY-PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
RS P +K L+ EC K RP F +I+A ++
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 120/232 (51%), Gaps = 18/232 (7%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E +I+ + HPN+++ G VT ++P+MI+ E+ G L S+L+ G+ + +++
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 123
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+A GM YL E +H DL +NIL+++ K+S FGL R +
Sbjct: 124 LRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCE 409
+ P + APE +F + DA+S+G++++E++ G +P+ ++V+ + +
Sbjct: 181 LGGKIPIR-WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQD 239
Query: 410 GKRPPLKIKARSYPPD----LKELIEECWDPKPVIRPNFNEIIARLDRIVCN 457
+ PP PPD L +L+ +CW RP F ++++ LD+++ N
Sbjct: 240 YRLPP--------PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 283
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 95 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 150
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
IIH DLK NI L +KI FGL ++ + + + L++APE+
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK----SRWSGSHQFEQLSGSILWMAPEVI 206
Query: 367 KNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY- 422
+ ++ + D Y+FG++LYE++ G P+ + + M G P K RS
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 266
Query: 423 PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P +K L+ EC K RP F +I+A ++
Sbjct: 267 PKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 36 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 93
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 94 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 149
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
IIH DLK NI L +KI FGL ++ + + + L++APE+
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK----SRWSGSHQFEQLSGSILWMAPEVI 205
Query: 367 KNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY- 422
+ ++ + D Y+FG++LYE++ G P+ + + M G P K RS
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 265
Query: 423 PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P +K L+ EC K RP F +I+A ++
Sbjct: 266 PKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
+++V I +S ++ F E +I+ + HPNV+ G VT++ P+MI+ E+ G
Sbjct: 35 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 94
Query: 272 LASYL-QKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKIS 330
L S+L Q G+ + +++ +A GM YL + +H L +NIL+++ K+S
Sbjct: 95 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRALAARNILVNSNLVCKVS 151
Query: 331 GFGLLRL--------QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGL 382
FGL R Y S KI P+ + APE + +F + D +S+G+
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKI--PIR-------WTAPEAIQYRKFTSASDVWSYGI 202
Query: 383 ILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIR 441
+++E++ G +P+ ++V+ + + + PP P L +L+ +CW R
Sbjct: 203 VMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP----PMDCPSALHQLMLDCWQKDRNHR 258
Query: 442 PNFNEIIARLDRIVCN 457
P F +I+ LD+++ N
Sbjct: 259 PKFGQIVNTLDKMIRN 274
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 72 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 127
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
IIH DLK NI L +KI FGL ++ + + + L++APE+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK----SRWSGSHQFEQLSGSILWMAPEVI 183
Query: 367 KNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY- 422
+ ++ + D Y+FG++LYE++ G P+ + + M G P K RS
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 423 PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P +K L+ EC K RP F +I+A ++
Sbjct: 244 PKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 72 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 127
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
IIH DLK NI L +KI FGL ++ + + + L++APE+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK----SRWSGSHQFEQLSGSILWMAPEVI 183
Query: 367 KNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY- 422
+ ++ + D Y+FG++LYE++ G P+ + + M G P K RS
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 423 PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P +K L+ EC K RP F +I+A ++
Sbjct: 244 PKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 69 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 124
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
IIH DLK NI L +KI FGL ++ + + + L++APE+
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK----SRWSGSHQFEQLSGSILWMAPEVI 180
Query: 367 KNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY- 422
+ ++ + D Y+FG++LYE++ G P+ + + M G P K RS
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 240
Query: 423 PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P +K L+ EC K RP F +I+A ++
Sbjct: 241 PKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T+ + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 67 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 122
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
IIH DLK NI L +KI FGL ++ + + + L++APE+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK----SRWSGSHQFEQLSGSILWMAPEVI 178
Query: 367 KNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY- 422
+ ++ + D Y+FG++LYE++ G P+ + + M G P K RS
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 423 PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P +K L+ EC K RP F +I+A ++
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 131/270 (48%), Gaps = 18/270 (6%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ I GS+ KW+G V VK+L+ + P+++ AF +E+ ++ K RH N+
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ F+G T + IV ++ L +L + + K++ A A+GM+YLH
Sbjct: 67 LLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---A 122
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
IIH DLK NI L +KI FGL ++ + + + L++APE+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK----SRWSGSHQFEQLSGSILWMAPEVI 178
Query: 367 KNEE---FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY- 422
+ ++ + D Y+FG++LYE++ G P+ + + M G P K RS
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 423 PPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P +K L+ EC K RP F +I+A ++
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 132/267 (49%), Gaps = 26/267 (9%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT-- 255
+ G Y N + +K L + + + +++ AF E ++ HPNV+ +G +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP 94
Query: 256 QNIPMMIVLEYHAKGDLASYLQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDL 314
+ +P ++L Y GDL +++ R K ++ F L +ARGM YL E K +H DL
Sbjct: 95 EGLPH-VLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDL 150
Query: 315 KPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIV-FPVSHIDPANLYVAPEIYKNE 369
+N +LD +K++ FGL R +Y S ++ + PV + A E +
Sbjct: 151 AARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK-------WTALESLQTY 203
Query: 370 EFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKE 428
F D +SFG++L+E++ G P+ P ++ + +G+R P + P L +
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLP---QPEYCPDSLYQ 259
Query: 429 LIEECWDPKPVIRPNFNEIIARLDRIV 455
++++CW+ P +RP F ++ +++IV
Sbjct: 260 VMQQCWEADPAVRPTFRVLVGEVEQIV 286
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 58/281 (20%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T V VK+L + + P + E ++++ HP+V++ GA +Q+ P+++++EY G
Sbjct: 54 TTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 271 DLASYLQKKGRLSP------------------------SKVLRFALDLARGMNYLHECKP 306
L +L++ ++ P ++ FA +++GM YL E K
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK- 170
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYV 361
++H DL +NIL+ G ++KIS FGL R Y+ + +I PV + +L+
Sbjct: 171 --LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI--PVKWMAIESLF- 225
Query: 362 APEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKAR 420
IY + D +SFG++L+E++ G P+ PPE + L LK R
Sbjct: 226 -DHIYTTQS-----DVWSFGVLLWEIVTLGGNPYPGIPPERLFNL---------LKTGHR 270
Query: 421 SYPPD-----LKELIEECWDPKPVIRPNFNEIIARLDRIVC 456
PD + L+ +CW +P RP F +I L++++
Sbjct: 271 MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 54/279 (19%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T V VK+L + + P + E ++++ HP+V++ GA +Q+ P+++++EY G
Sbjct: 54 TTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 271 DLASYLQKKGRLSP------------------------SKVLRFALDLARGMNYLHECKP 306
L +L++ ++ P ++ FA +++GM YL E K
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK- 170
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY---ISPEKAKIVFPVSHIDPANLYVAP 363
++H DL +NIL+ G ++KIS FGL R Y ++++ PV + +L+
Sbjct: 171 --LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF--D 226
Query: 364 EIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY 422
IY + D +SFG++L+E++ G P+ PPE + L LK R
Sbjct: 227 HIYTTQS-----DVWSFGVLLWEIVTLGGNPYPGIPPERLFNL---------LKTGHRME 272
Query: 423 PPD-----LKELIEECWDPKPVIRPNFNEIIARLDRIVC 456
PD + L+ +CW +P RP F +I L++++
Sbjct: 273 RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 127/260 (48%), Gaps = 27/260 (10%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
N TKV VK L + + AF E +++ +H +V+ VT+ P+ I+ E+ A
Sbjct: 35 NSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMA 90
Query: 269 KGDLASYLQ--KKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
KG L +L+ + G++ K++ F+ +A GM Y+ IH DL+ N+L+
Sbjct: 91 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLM 147
Query: 327 LKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGL 382
KI+ FGL R+ +Y + E AK FP+ + APE F + +SFG+
Sbjct: 148 CKIADFGLARVIEDNEYTAREGAK--FPIK-------WTAPEAINFGCFTIKSNVWSFGI 198
Query: 383 ILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIR 441
+LYE++ G P+ + +V+ + +G R P + + P +L ++++ CW K R
Sbjct: 199 LLYEIVTYGKIPYPGRTNADVMSAL-SQGYRMP---RMENCPDELYDIMKMCWKEKAEER 254
Query: 442 PNFNEIIARLDRIVCNCSKQ 461
P F+ + + LD Q
Sbjct: 255 PTFDYLQSVLDDFYTATEGQ 274
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 29/304 (9%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 22 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 81
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 82 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 140
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM YL K +H DL +N +LD +K++ FGL
Sbjct: 141 IRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 197
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGV 391
R Y K + V + A L ++A E + ++F D +SFG++L+E++
Sbjct: 198 ARDMY-----DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 252
Query: 392 QPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEIIAR 450
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E+++R
Sbjct: 253 APPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 308
Query: 451 LDRI 454
+ I
Sbjct: 309 ISAI 312
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 188 LELQVRKADG----ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243
L L + DG + +G + V VK L + PE ++ F E+ +
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 244 HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLH 302
H N+++ G V PM +V E G L L+K +G + R+A+ +A GM YL
Sbjct: 74 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL------QYISPEKAKIVFPVSHIDP 356
+ IH DL +N+LL +KI FGL+R Y+ E K+ F
Sbjct: 133 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA------ 183
Query: 357 ANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPL 415
+ APE K F + D + FG+ L+EM G +P+ +++ + EG+R P
Sbjct: 184 ---WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP- 239
Query: 416 KIKARSYPPDLKELIEECWDPKPVIRPNF 444
+ P D+ ++ +CW KP RP F
Sbjct: 240 --RPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 29/304 (9%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 23 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 82
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 83 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 141
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM YL K +H DL +N +LD +K++ FGL
Sbjct: 142 IRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 198
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGV 391
R Y K + V + A L ++A E + ++F D +SFG++L+E++
Sbjct: 199 ARDMY-----DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 253
Query: 392 QPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEIIAR 450
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E+++R
Sbjct: 254 APPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 309
Query: 451 LDRI 454
+ I
Sbjct: 310 ISAI 313
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 30 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 85
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 86 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 145
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R Y + + K + PV +++
Sbjct: 146 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 195
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 251
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 252 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 29/304 (9%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 63
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 122
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM YL K +H DL +N +LD +K++ FGL
Sbjct: 123 IRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGV 391
R Y K + V + A L ++A E + ++F D +SFG++L+E++
Sbjct: 180 ARDMY-----DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 392 QPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEIIAR 450
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E+++R
Sbjct: 235 APPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 290
Query: 451 LDRI 454
+ I
Sbjct: 291 ISAI 294
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 36 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 91
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 92 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 151
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R Y + + K + PV +++
Sbjct: 152 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 201
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 257
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 37 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 92
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 93 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 152
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R Y + + K + PV +++
Sbjct: 153 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 202
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 258
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 36 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 91
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 92 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 151
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R Y + + K + PV +++
Sbjct: 152 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 201
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 257
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 188 LELQVRKADG----ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243
L L + DG + +G + V VK L + PE ++ F E+ +
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 244 HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLH 302
H N+++ G V PM +V E G L L+K +G + R+A+ +A GM YL
Sbjct: 74 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL------QYISPEKAKIVFPVSHIDP 356
+ IH DL +N+LL +KI FGL+R Y+ E K+ F
Sbjct: 133 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA------ 183
Query: 357 ANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPL 415
+ APE K F + D + FG+ L+EM G +P+ +++ + EG+R P
Sbjct: 184 ---WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP- 239
Query: 416 KIKARSYPPDLKELIEECWDPKPVIRPNF 444
+ P D+ ++ +CW KP RP F
Sbjct: 240 --RPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 34 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 89
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 90 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 149
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R Y + + K + PV +++
Sbjct: 150 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 199
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 255
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 256 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 19/234 (8%)
Query: 226 PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKG-RLSP 284
P+ F E I+++ HPN+V+ +G TQ P+ IV+E GD ++L+ +G RL
Sbjct: 153 PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV 212
Query: 285 SKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEK 344
+L+ D A GM YL + IH DL +N L+ LKIS FG+ R E+
Sbjct: 213 KTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGMSR------EE 263
Query: 345 AKIVFPVS---HIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPE 400
A V+ S P + APE + D +SFG++L+E G P+ P
Sbjct: 264 ADGVYAASGGLRQVPVK-WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY-PNLSN 321
Query: 401 EVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ + +G R P P + L+E+CW +P RP+F+ I L I
Sbjct: 322 QQTREFVEKGGRLPC---PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 188 LELQVRKADG----ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243
L L + DG + +G + V VK L + PE ++ F E+ +
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 244 HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLH 302
H N+++ G V PM +V E G L L+K +G + R+A+ +A GM YL
Sbjct: 80 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL------QYISPEKAKIVFPVSHIDP 356
+ IH DL +N+LL +KI FGL+R Y+ E K+ F
Sbjct: 139 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA------ 189
Query: 357 ANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPL 415
+ APE K F + D + FG+ L+EM G +P+ +++ + EG+R P
Sbjct: 190 ---WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP- 245
Query: 416 KIKARSYPPDLKELIEECWDPKPVIRPNF 444
+ P D+ ++ +CW KP RP F
Sbjct: 246 --RPEDCPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEY 266
+G K+ + D ++ F E I++ HPNV+ +G ++ P+ +VL Y
Sbjct: 47 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPY 105
Query: 267 HAKGDLASYLQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
GDL ++++ + K ++ F L +A+GM YL K +H DL +N +LD
Sbjct: 106 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKF 162
Query: 326 QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGL 382
+K++ FGL R Y K + V + A L ++A E + ++F D +SFG+
Sbjct: 163 TVKVADFGLARDMY-----DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 217
Query: 383 ILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIR 441
+L+E++ P +P + + +G+R + Y PD L E++ +CW PK +R
Sbjct: 218 LLWELMTRGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMR 273
Query: 442 PNFNEIIARLDRI 454
P+F+E+++R+ I
Sbjct: 274 PSFSELVSRISAI 286
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 33 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 88
Query: 256 QNIPMMIVLEYHAKGDLASYLQK-------KGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL+ L+P SK+++ A ++A GM YL+ K
Sbjct: 89 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK 148
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R Y + + K + PV +++
Sbjct: 149 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 198
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 254
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 255 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 31 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 87
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 88 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 142
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 199
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 200 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 259
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 260 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 301
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 29/304 (9%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 63
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 122
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM YL K +H DL +N +LD +K++ FGL
Sbjct: 123 IRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGV 391
R Y K + V + A L ++A E + ++F D +SFG++L+E++
Sbjct: 180 ARDMY-----DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 392 QPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEIIAR 450
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E+++R
Sbjct: 235 APPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 290
Query: 451 LDRI 454
+ I
Sbjct: 291 ISAI 294
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 28 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 84
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 85 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 139
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 196
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 197 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 256
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 257 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 298
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 27 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 83
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 84 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 138
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 195
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 255
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 256 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 43 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 98
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 99 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 158
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R Y + + K + PV +++
Sbjct: 159 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 208
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 264
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 29 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 85
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 86 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 140
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 197
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 198 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 257
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 258 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 299
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 65 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 120
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 121 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 180
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R Y + + K + PV +++
Sbjct: 181 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 230
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 286
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 287 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 188 LELQVRKADG----ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243
L L + DG + +G + V VK L + PE ++ F E+ +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 244 HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLH 302
H N+++ G V PM +V E G L L+K +G + R+A+ +A GM YL
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL------QYISPEKAKIVFPVSHIDP 356
+ IH DL +N+LL +KI FGL+R Y+ E K+ F
Sbjct: 129 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA------ 179
Query: 357 ANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPL 415
+ APE K F + D + FG+ L+EM G +P+ +++ + EG+R P
Sbjct: 180 ---WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP- 235
Query: 416 KIKARSYPPDLKELIEECWDPKPVIRPNF 444
+ P D+ ++ +CW KP RP F
Sbjct: 236 --RPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 29/304 (9%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 3 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 62
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 63 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 121
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM YL K +H DL +N +LD +K++ FGL
Sbjct: 122 IRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 178
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGV 391
R Y K + V + A L ++A E + ++F D +SFG++L+E++
Sbjct: 179 ARDMY-----DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 392 QPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEIIAR 450
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E+++R
Sbjct: 234 APPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 289
Query: 451 LDRI 454
+ I
Sbjct: 290 ISAI 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 30 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 86
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 87 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 141
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 198
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 199 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 258
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 259 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 300
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEY 266
+G K+ + D ++ F E I++ HPNV+ +G ++ P+ +VL Y
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPY 111
Query: 267 HAKGDLASYLQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
GDL ++++ + K ++ F L +A+GM YL K +H DL +N +LD
Sbjct: 112 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKF 168
Query: 326 QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGL 382
+K++ FGL R Y K + V + A L ++A E + ++F D +SFG+
Sbjct: 169 TVKVADFGLARDMY-----DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
Query: 383 ILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIR 441
+L+E++ P +P + + +G+R + Y PD L E++ +CW PK +R
Sbjct: 224 LLWELMTRGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMR 279
Query: 442 PNFNEIIARLDRI 454
P+F+E+++R+ I
Sbjct: 280 PSFSELVSRISAI 292
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 188 LELQVRKADG----ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243
L L + DG + +G + V VK L + PE ++ F E+ +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 244 HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLH 302
H N+++ G V PM +V E G L L+K +G + R+A+ +A GM YL
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL------QYISPEKAKIVFPVSHIDP 356
+ IH DL +N+LL +KI FGL+R Y+ E K+ F
Sbjct: 129 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA------ 179
Query: 357 ANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPL 415
+ APE K F + D + FG+ L+EM G +P+ +++ + EG+R P
Sbjct: 180 ---WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP- 235
Query: 416 KIKARSYPPDLKELIEECWDPKPVIRPNF 444
+ P D+ ++ +CW KP RP F
Sbjct: 236 --RPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 24 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 80
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 81 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 135
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 192
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 253 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 24 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 80
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 81 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 135
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 192
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 253 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 42 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 98
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 99 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 153
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 210
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 271 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 312
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 135/281 (48%), Gaps = 42/281 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 55 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 111
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 112 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 166
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 223
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 224 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 283
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ P ++ ++ ECW+ RP+F ++ R+D+I
Sbjct: 284 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 23 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 79
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 80 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 134
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 191
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 192 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 251
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 252 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 54/279 (19%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T V VK+L + + P + E ++++ HP+V++ GA +Q+ P+++++EY G
Sbjct: 54 TTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 271 DLASYLQKKGRLSP------------------------SKVLRFALDLARGMNYLHECKP 306
L +L++ ++ P ++ FA +++GM YL E
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS- 170
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY---ISPEKAKIVFPVSHIDPANLYVAP 363
++H DL +NIL+ G ++KIS FGL R Y ++++ PV + +L+
Sbjct: 171 --LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF--D 226
Query: 364 EIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY 422
IY + D +SFG++L+E++ G P+ PPE + L LK R
Sbjct: 227 HIYTTQS-----DVWSFGVLLWEIVTLGGNPYPGIPPERLFNL---------LKTGHRME 272
Query: 423 PPD-----LKELIEECWDPKPVIRPNFNEIIARLDRIVC 456
PD + L+ +CW +P RP F +I L++++
Sbjct: 273 RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEY 266
+G K+ + D ++ F E I++ HPNV+ +G ++ P+ +VL Y
Sbjct: 52 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPY 110
Query: 267 HAKGDLASYLQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
GDL ++++ + K ++ F L +A+GM YL K +H DL +N +LD
Sbjct: 111 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKF 167
Query: 326 QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGL 382
+K++ FGL R Y K + V + A L ++A E + ++F D +SFG+
Sbjct: 168 TVKVADFGLARDMY-----DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 222
Query: 383 ILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIR 441
+L+E++ P +P + + +G+R + Y PD L E++ +CW PK +R
Sbjct: 223 LLWELMTRGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMR 278
Query: 442 PNFNEIIARLDRI 454
P+F+E+++R+ I
Sbjct: 279 PSFSELVSRISAI 291
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 135/281 (48%), Gaps = 42/281 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 22 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 78
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 79 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 133
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 190
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 191 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 250
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ P ++ ++ ECW+ RP+F ++ R+D+I
Sbjct: 251 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 287
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I++E+ G+L YL++ R
Sbjct: 46 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 105
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY-- 339
S V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 106 VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
Query: 340 ISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKP 398
A FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 163 TXTAHAGAKFPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
Query: 399 PEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
P +V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 216 PSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 42/284 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 42 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 98
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 99 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 153
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 210
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCN 457
+ P ++ ++ ECW+ RP+F ++ R+D+I N
Sbjct: 271 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 310
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEY 266
+G K+ + D ++ F E I++ HPNV+ +G ++ P+ +VL Y
Sbjct: 50 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPY 108
Query: 267 HAKGDLASYLQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
GDL ++++ + K ++ F L +A+GM YL K +H DL +N +LD
Sbjct: 109 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKF 165
Query: 326 QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGL 382
+K++ FGL R Y K + V + A L ++A E + ++F D +SFG+
Sbjct: 166 TVKVADFGLARDMY-----DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 220
Query: 383 ILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIR 441
+L+E++ P +P + + +G+R + Y PD L E++ +CW PK +R
Sbjct: 221 LLWELMTRGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMR 276
Query: 442 PNFNEIIARLDRI 454
P+F+E+++R+ I
Sbjct: 277 PSFSELVSRISAI 289
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 43 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 98
Query: 256 QNIPMMIVLEYHAKGDLASYLQK-------KGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL+ L+P SK+++ A ++A GM YL+ K
Sbjct: 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK 158
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R Y + + K + PV +++
Sbjct: 159 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 208
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 264
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 41/275 (14%)
Query: 210 GTKVWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYH 267
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY
Sbjct: 54 AVTVAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 110
Query: 268 AKGDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+KG+L YL+ + +++ ++ LARGM YL K IH
Sbjct: 111 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIH 167
Query: 312 CDLKPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYK 367
DL +N+L+ +KI+ FGL R + Y + PV ++APE
Sbjct: 168 RDLTARNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALF 219
Query: 368 NEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDL 426
+ + D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L
Sbjct: 220 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNEL 275
Query: 427 KELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
++ +CW P RP F +++ LDRI+ + Q
Sbjct: 276 YMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNQ 310
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GRLSPSKVLRF 290
F E +I+ + HPN+++ G VT+ MIV EY G L ++L+ G+ + +++
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV-- 348
+ GM YL + +H DL +N+L+D+ K+S FGL R+ P+ A
Sbjct: 157 LRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 349 --FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKL 405
P+ + APE F + D +SFG++++E++ G +P+ +V+
Sbjct: 214 GKIPIR-------WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS- 265
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
EG R P + P L +L+ +CW RP F++I++ LD ++
Sbjct: 266 SVEEGYRLPAPMGC---PHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GRLSPSKVLRF 290
F E +I+ + HPN+++ G VT+ MIV EY G L ++L+ G+ + +++
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ GM YL + +H DL +N+L+D+ K+S FGL R+ P+ A +
Sbjct: 157 LRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA---YT 210
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCE 409
+ + APE F + D +SFG++++E++ G +P+ +V+ E
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS-SVEE 269
Query: 410 GKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
G R P + P L +L+ +CW RP F++I++ LD ++
Sbjct: 270 GYRLPAPMGC---PHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 39/268 (14%)
Query: 210 GTKVWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYH 267
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY
Sbjct: 67 AVTVAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 123
Query: 268 AKGDLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+KG+L YL+ + +++ ++ LARGM YL K IH
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIH 180
Query: 312 CDLKPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKN 368
DL +N+L+ +KI+ FGL R + I K PV ++APE +
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK-------WMAPEALFD 233
Query: 369 EEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLK 427
+ D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELY 289
Query: 428 ELIEECWDPKPVIRPNFNEIIARLDRIV 455
++ +CW P RP F +++ LDRI+
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 130/265 (49%), Gaps = 39/265 (14%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +KG
Sbjct: 70 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 127 NLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 183
Query: 315 KPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEEF 371
+N+L+ +KI+ FGL R + I K PV ++APE + +
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK-------WMAPEALFDRVY 236
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L ++
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMMM 292
Query: 431 EECWDPKPVIRPNFNEIIARLDRIV 455
+CW P RP F +++ LDRI+
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 131/255 (51%), Gaps = 30/255 (11%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T+V VK ++ ES ERI F +E ++++ +VV+ +G V++ P ++V+E A G
Sbjct: 47 TRVAVKTVN-ESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 104
Query: 271 DLASYLQK--------KGRLSPS--KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL SYL+ GR P+ ++++ A ++A GM YL+ K +H DL +N +
Sbjct: 105 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 161
Query: 321 LDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
+ + +KI FG+ R Y + + K + PV ++APE K+ F S D
Sbjct: 162 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDM 214
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++L+E+ QP+ E+V+K + G + + P + +L+ CW
Sbjct: 215 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD----QPDNCPERVTDLMRMCWQF 270
Query: 437 KPVIRPNFNEIIARL 451
P +RP F EI+ L
Sbjct: 271 NPKMRPTFLEIVNLL 285
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 31/275 (11%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
GS ++ +++ G V VK L H P++ F E+ I++ +V++ G
Sbjct: 37 GSVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVS 93
Query: 255 TQ--NIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ +V+EY G L +LQ+ + RL S++L ++ + +GM YL + +H
Sbjct: 94 YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVH 150
Query: 312 CDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEF 371
DL +NIL+++ +KI+ FGL +L + +K V P Y APE + F
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKL--LPLDKDYYVVREPGQSPIFWY-APESLSDNIF 207
Query: 372 DRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKAR----------- 420
R D +SFG++LYE+ P E +++M CE P L
Sbjct: 208 SRQSDVWSFGVVLYELFTYCDK-SCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAP 266
Query: 421 -SYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ P ++ EL++ CW P P RP+F+ + +LD +
Sbjct: 267 PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 63 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILY 121
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ + +K+ FGL R Y K K
Sbjct: 122 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 179 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 229
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 230 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 131/255 (51%), Gaps = 30/255 (11%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T+V VK ++ ES ERI F +E ++++ +VV+ +G V++ P ++V+E A G
Sbjct: 48 TRVAVKTVN-ESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 271 DLASYLQK--------KGRLSPS--KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL SYL+ GR P+ ++++ A ++A GM YL+ K +H DL +N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 162
Query: 321 LDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
+ + +KI FG+ R Y + + K + PV ++APE K+ F S D
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDM 215
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++L+E+ QP+ E+V+K + G + + P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD----QPDNCPERVTDLMRMCWQF 271
Query: 437 KPVIRPNFNEIIARL 451
P +RP F EI+ L
Sbjct: 272 NPKMRPTFLEIVNLL 286
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 33/308 (10%)
Query: 165 PKTKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWV 215
P T ++ NP + V + P L V + I +G + +G K+
Sbjct: 2 PGTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHC 61
Query: 216 KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLA 273
+ D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLR 120
Query: 274 SYLQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGF 332
++++ + K ++ F L +A+GM +L K +H DL +N +LD +K++ F
Sbjct: 121 NFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADF 177
Query: 333 GLLRLQYISP-----EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM 387
GL R Y K PV ++A E + ++F D +SFG++L+E+
Sbjct: 178 GLARDMYDKEFDSVHNKTGAKLPVK-------WMALESLQTQKFTTKSDVWSFGVLLWEL 230
Query: 388 IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNE 446
+ P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E
Sbjct: 231 MTRGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 286
Query: 447 IIARLDRI 454
+++R+ I
Sbjct: 287 LVSRISAI 294
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 138/270 (51%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 30 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 85
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 86 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 145
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVA 362
+H DL +N + +KI FG+ R Y + + K + PV +++
Sbjct: 146 ---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMS 195
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 251
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 252 CPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 130/260 (50%), Gaps = 29/260 (11%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 22 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 76
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 133
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL +Y + E AK FP+ + APE F
Sbjct: 134 NILVSDTLSCKIADFGLARLIEDNEYTAREGAK--FPIK-------WTAPEAINYGTFTI 184
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 240
Query: 433 CWDPKPVIRPNFNEIIARLD 452
CW +P RP F+ + + L+
Sbjct: 241 CWKERPEDRPTFDYLRSVLE 260
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILY 119
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ + +K+ FGL R Y K K
Sbjct: 120 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 177 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 227
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 228 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 273
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 29/304 (9%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 3 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 62
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 63 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 121
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM YL K +H DL +N +LD +K++ FGL
Sbjct: 122 IRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 178
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGV 391
R Y K V + A L ++A E + ++F D +SFG++L+E++
Sbjct: 179 ARDMY-----DKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 392 QPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEIIAR 450
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E+++R
Sbjct: 234 APPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 289
Query: 451 LDRI 454
+ I
Sbjct: 290 ISAI 293
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 86 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILY 144
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ + +K+ FGL R Y K K
Sbjct: 145 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 202 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 252
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 253 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 298
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 40/262 (15%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
KV VK+L +H D + A EL I+ +H N+V +GA T P++++ EY G
Sbjct: 78 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 271 DLASYLQKKGR--------------LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
DL ++L++K R LS +L F+ +A+GM +L IH D+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 192
Query: 317 KNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+N+LL NG KI FGL R YI A++ PV ++APE + +
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVK-------WMAPESIFDCVY 243
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPP-DLKEL 429
D +S+G++L+E+ G+ P+ P +V + + ++ ++ P ++ +
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNPY----PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSI 299
Query: 430 IEECWDPKPVIRPNFNEIIARL 451
++ CW +P RP F +I + L
Sbjct: 300 MQACWALEPTHRPTFQQICSFL 321
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 29/269 (10%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 37 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 91
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 148
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL +Y + E AK FP+ + APE F
Sbjct: 149 NILVSDTLSCKIADFGLARLIEDNEYTAREGAK--FPIK-------WTAPEAINYGTFTI 199
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 255
Query: 433 CWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
CW +P RP F+ + + L+ Q
Sbjct: 256 CWKERPEDRPTFDYLRSVLEDFFTATEGQ 284
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 131/255 (51%), Gaps = 30/255 (11%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T+V VK ++ ES ERI F +E ++++ +VV+ +G V++ P ++V+E A G
Sbjct: 48 TRVAVKTVN-ESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 271 DLASYLQK--------KGRLSPS--KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL SYL+ GR P+ ++++ A ++A GM YL+ K +H DL +N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 162
Query: 321 LDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
+ + +KI FG+ R Y + + K + PV ++APE K+ F S D
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDM 215
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++L+E+ QP+ E+V+K + G + + P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD----QPDNCPERVTDLMRMCWQF 271
Query: 437 KPVIRPNFNEIIARL 451
P +RP F EI+ L
Sbjct: 272 NPKMRPTFLEIVNLL 286
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 27 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 83
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++E+ G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 84 YSAGRRNLKL--IMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 138
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 195
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 255
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 256 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 46 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 105
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY-- 339
S V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 106 VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
Query: 340 ISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKP 398
A FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 163 TXTAHAGAKFPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
Query: 399 PEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
P +V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 216 PSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 130/260 (50%), Gaps = 29/260 (11%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL +Y + E AK FP+ + APE F
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEYTAREGAK--FPIK-------WTAPEAINYGTFTI 189
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 245
Query: 433 CWDPKPVIRPNFNEIIARLD 452
CW +P RP F+ + + L+
Sbjct: 246 CWKERPEDRPTFDYLRSVLE 265
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 24 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 80
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 81 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 135
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG---ESPIFWYAPESLTES 192
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 253 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 41/266 (15%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +KG
Sbjct: 116 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 172
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 173 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 229
Query: 315 KPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
+N+L+ +KI+ FGL R + Y + PV ++APE +
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALFDRV 281
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 282 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHR---MDKPANCTNELYMM 337
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIV 455
+ +CW P RP F +++ LDRI+
Sbjct: 338 MRDCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L ++ R PS+
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLA 139
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 140 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 197 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 250 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILY 116
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ + +K+ FGL R Y K K
Sbjct: 117 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 174 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 225 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 41/266 (15%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +KG
Sbjct: 62 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 118
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 119 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 175
Query: 315 KPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
+N+L+ +KI+ FGL R + Y + PV ++APE +
Sbjct: 176 AARNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALFDRV 227
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 228 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMM 283
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIV 455
+ +CW P RP F +++ LDRI+
Sbjct: 284 MRDCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 130/260 (50%), Gaps = 29/260 (11%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 33 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 87
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 144
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL +Y + E AK FP+ + APE F
Sbjct: 145 NILVSDTLSCKIADFGLARLIEDNEYTAREGAK--FPIK-------WTAPEAINYGTFTI 195
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 251
Query: 433 CWDPKPVIRPNFNEIIARLD 452
CW +P RP F+ + + L+
Sbjct: 252 CWKERPEDRPTFDYLRSVLE 271
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILY 116
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ + +K+ FGL R Y K K
Sbjct: 117 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 174 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 225 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 60 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILY 118
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ + +K+ FGL R Y K K
Sbjct: 119 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 176 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 226
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 227 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 272
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L ++ R PS+
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLA 165
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 166 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 222
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 223 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 275
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 276 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 39/265 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VK+L ++ + E ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +KG+
Sbjct: 70 VAVKMLKDDATE--EDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 272 LASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLK 315
L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLA 184
Query: 316 PKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+N+L+ +KI+ FGL R + Y + PV ++APE + +
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALFDRVY 236
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L ++
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMMM 292
Query: 431 EECWDPKPVIRPNFNEIIARLDRIV 455
+CW P RP F +++ LDRI+
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L ++ R PS+
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLA 145
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 146 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 202
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 203 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 255
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 256 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 46 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 105
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
S V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 106 VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 163 TFTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
P +V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 214 IDPSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 220 KESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK 278
K+ H+D F EL ++ K HPN++ +GA + + +EY G+L +L+K
Sbjct: 66 KDDHRD------FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 119
Query: 279 K----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD 322
LS ++L FA D+ARGM+YL + IH DL +NIL+
Sbjct: 120 SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVG 176
Query: 323 NGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGL 382
KI+ FGL R Q + +K PV ++A E + + D +S+G+
Sbjct: 177 ENYVAKIADFGLSRGQEVYVKKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGV 229
Query: 383 ILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPV 439
+L+E++ G P+ E+ + + +G R PL Y +L+ +CW KP
Sbjct: 230 LLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVY-----DLMRQCWREKPY 283
Query: 440 IRPNFNEIIARLDRIV 455
RP+F +I+ L+R++
Sbjct: 284 ERPSFAQILVSLNRML 299
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 130/260 (50%), Gaps = 29/260 (11%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 32 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 86
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 143
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL +Y + E AK FP+ + APE F
Sbjct: 144 NILVSDTLSCKIADFGLARLIEDNEYTAREGAK--FPIK-------WTAPEAINYGTFTI 194
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 250
Query: 433 CWDPKPVIRPNFNEIIARLD 452
CW +P RP F+ + + L+
Sbjct: 251 CWKERPEDRPTFDYLRSVLE 270
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 19/234 (8%)
Query: 226 PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKG-RLSP 284
P+ F E I+++ HPN+V+ +G TQ P+ IV+E GD ++L+ +G RL
Sbjct: 153 PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV 212
Query: 285 SKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEK 344
+L+ D A GM YL + IH DL +N L+ LKIS FG+ R E+
Sbjct: 213 KTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGMSR------EE 263
Query: 345 AKIVFPVS---HIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPE 400
A V S P + APE + D +SFG++L+E G P+ P
Sbjct: 264 ADGVXAASGGLRQVPVK-WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY-PNLSN 321
Query: 401 EVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ + +G R P P + L+E+CW +P RP+F+ I L I
Sbjct: 322 QQTREFVEKGGRLPC---PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 31/275 (11%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
GS ++ +++ G V VK L H P++ F E+ I++ +V++ G
Sbjct: 21 GSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 77
Query: 255 TQ--NIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ +V+EY G L +LQ+ + RL S++L ++ + +GM YL + +H
Sbjct: 78 YGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVH 134
Query: 312 CDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEF 371
DL +NIL+++ +KI+ FGL +L + + + P + APE + F
Sbjct: 135 RDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS---PIFWYAPESLSDNIF 191
Query: 372 DRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPL-----------KIKAR 420
R D +SFG++LYE+ P E +++M CE P L ++ A
Sbjct: 192 SRQSDVWSFGVVLYELFTYCDK-SCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAP 250
Query: 421 -SYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ P ++ EL++ CW P P RP+F+ + +LD +
Sbjct: 251 PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 285
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 41/266 (15%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +KG
Sbjct: 59 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 115
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 116 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 172
Query: 315 KPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
+N+L+ +KI+ FGL R + Y + PV ++APE +
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALFDRV 224
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 225 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMM 280
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIV 455
+ +CW P RP F +++ LDRI+
Sbjct: 281 MRDCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 220 KESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK 278
K+ H+D F EL ++ K HPN++ +GA + + +EY G+L +L+K
Sbjct: 56 KDDHRD------FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 109
Query: 279 K----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD 322
LS ++L FA D+ARGM+YL + IH DL +NIL+
Sbjct: 110 SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVG 166
Query: 323 NGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGL 382
KI+ FGL R Q + +K PV ++A E + + D +S+G+
Sbjct: 167 ENYVAKIADFGLSRGQEVYVKKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGV 219
Query: 383 ILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPV 439
+L+E++ G P+ E+ + + +G R PL Y +L+ +CW KP
Sbjct: 220 LLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVY-----DLMRQCWREKPY 273
Query: 440 IRPNFNEIIARLDRIV 455
RP+F +I+ L+R++
Sbjct: 274 ERPSFAQILVSLNRML 289
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 41/266 (15%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +KG
Sbjct: 70 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKG 126
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 183
Query: 315 KPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
+N+L+ +KI+ FGL R + Y + PV ++APE +
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALFDRV 235
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMM 291
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIV 455
+ +CW P RP F +++ LDRI+
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L ++ R PS+
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLA 139
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 140 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 197 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 250 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 117/261 (44%), Gaps = 25/261 (9%)
Query: 193 RKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
K G G V W + V + K +D + F E ++++ +HPN+VQ +G
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAV--KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKV--LRFALDLARGMNYLHECKPDPII 310
T P IV EY G+L YL++ R + V L A ++ M YL + I
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK---KNFI 152
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAKIVFPVSHIDPANLYVAPEIY 366
H DL +N L+ +K++ FGL RL Y + AK FP+ + APE
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAK--FPIK-------WTAPESL 203
Query: 367 KNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD 425
F D ++FG++L+E+ G+ P+ +V L+ +G R + PP
Sbjct: 204 AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLL-EKGYRME---QPEGCPPK 259
Query: 426 LKELIEECWDPKPVIRPNFNE 446
+ EL+ CW P RP+F E
Sbjct: 260 VYELMRACWKWSPADRPSFAE 280
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 41/266 (15%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +KG
Sbjct: 70 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKG 126
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 183
Query: 315 KPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
+N+L+ +KI+ FGL R + Y + PV ++APE +
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALFDRV 235
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMM 291
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIV 455
+ +CW P RP F +++ LDRI+
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L ++ R PS+
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLA 153
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 154 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 211 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 264 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 55 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILY 113
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ + +K+ FGL R Y K K
Sbjct: 114 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 170
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 171 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 221
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 222 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L ++ R PS+
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLA 155
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 156 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 212
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 213 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 265
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 266 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 130/265 (49%), Gaps = 39/265 (14%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +KG
Sbjct: 70 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 183
Query: 315 KPKNILLDNGGQLKISGFGLLR-LQYISPEKAKI--VFPVSHIDPANLYVAPEIYKNEEF 371
+N+L+ +KI+ FGL R + I K PV ++APE + +
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK-------WMAPEALFDRVY 236
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L ++
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMMM 292
Query: 431 EECWDPKPVIRPNFNEIIARLDRIV 455
+CW P RP F +++ LDRI+
Sbjct: 293 RDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 133/275 (48%), Gaps = 31/275 (11%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
GS ++ +++ G V VK L H P++ F E+ I++ +V++ G
Sbjct: 25 GSVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVS 81
Query: 255 TQ--NIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ +V+EY G L +LQ+ + RL S++L ++ + +GM YL + +H
Sbjct: 82 YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVH 138
Query: 312 CDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEF 371
DL +NIL+++ +KI+ FGL +L + +K V P Y APE + F
Sbjct: 139 RDLAARNILVESEAHVKIADFGLAKL--LPLDKDYYVVREPGQSPIFWY-APESLSDNIF 195
Query: 372 DRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPL-----------KIKAR 420
R D +SFG++LYE+ P E +++M CE P L ++ A
Sbjct: 196 SRQSDVWSFGVVLYELFTYCDK-SCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAP 254
Query: 421 -SYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ P ++ EL++ CW P P RP+F+ + +LD +
Sbjct: 255 PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 289
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 49 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 108
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 109 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y +P AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 166 TYTAPAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 217 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L++ R PS+
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLA 156
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 157 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 213
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 214 AGYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 266
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 267 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILY 496
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ + +K+ FGL R Y K K
Sbjct: 497 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 554 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 604
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 605 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L ++ R PS+
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLA 138
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 139 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 196 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 249 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 32/256 (12%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
+V VK L E + + + ++ F E I+ K H N+V+ +G Q++P I+LE A GD
Sbjct: 77 QVAVKTL-PEVYSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 134
Query: 272 LASYLQKKGRLSPSK--------VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDN 323
L S+L ++ R PS+ +L A D+A G YL E + IH D+ +N LL
Sbjct: 135 LKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 190
Query: 324 GGQ---LKISGFGLLRLQYISPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
G KI FG+ R Y + K + PV ++ PE + F D
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDT 243
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++L+E+ G P+ K +EV++ + G+ P K + P + ++ +CW
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQH 299
Query: 437 KPVIRPNFNEIIARLD 452
+P RPNF I+ R++
Sbjct: 300 QPEDRPNFAIILERIE 315
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L++ R PS+
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLA 130
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 131 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 187
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 188 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 240
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 241 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L ++ R PS+
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLA 179
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 180 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 236
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 237 AGYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 290 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 227 ERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR-LSPS 285
E+ F E+ I+ HPN+V+ G + N P M V+E+ GDL L K + S
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRM-VMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 286 KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ-----LKISGFGLLRLQYI 340
LR LD+A G+ Y+ P PI+H DL+ NI L + + K++ FGL
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGL------ 175
Query: 341 SPEKAKIVFPVSHIDPANLYVAPEIYKNEE--FDRSVDAYSFGLILYEMIEGVQPFHPKP 398
+ V VS + ++APE EE + D YSF +ILY ++ G PF
Sbjct: 176 ---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
Query: 399 PEEV--VKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
++ + ++ EG RP + PP L+ +IE CW P RP+F+ I+ L +
Sbjct: 233 YGKIKFINMIREEGLRPTI---PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 171 PMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERI 229
P T ++ E L L+V+ G G + WNGT +V +K L K PE
Sbjct: 169 PQTQGLAKDAWEIPRESLRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE-- 224
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGR-LSPSKV 287
AF E +++K RH +VQ V++ P+ IV EY +KG L +L+ + G+ L ++
Sbjct: 225 -AFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 288 LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPE 343
+ A +A GM Y+ +H DL+ NIL+ K++ FGL RL +Y + +
Sbjct: 283 VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 344 KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEV 402
AK FP+ + APE F D +SFG++L E+ +G P+ EV
Sbjct: 340 GAK--FPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
Query: 403 VKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ G R P + P L +L+ +CW +P RP F + A L+ + Q
Sbjct: 391 LD-QVERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 171 PMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERI 229
P T ++ E L L+V+ G G + WNGT +V +K L K PE
Sbjct: 169 PQTQGLAKDAWEIPRESLRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE-- 224
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGR-LSPSKV 287
AF E +++K RH +VQ V++ P+ IV EY +KG L +L+ + G+ L ++
Sbjct: 225 -AFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 288 LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPE 343
+ A +A GM Y+ +H DL+ NIL+ K++ FGL RL +Y + +
Sbjct: 283 VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 344 KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEV 402
AK FP+ + APE F D +SFG++L E+ +G P+ EV
Sbjct: 340 GAK--FPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
Query: 403 VKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ G R P + P L +L+ +CW +P RP F + A L+ + Q
Sbjct: 391 LD-QVERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 50 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 110 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y +P AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 167 TYTAPAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 218 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 137/270 (50%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 28 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 83
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 84 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 143
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLR---LQYISPEKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R + K + PV +++
Sbjct: 144 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-------WMS 193
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 249
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 250 CPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 141/281 (50%), Gaps = 30/281 (10%)
Query: 181 PEYELNPLELQVRKADGITK-GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTI 238
PE+E+ L++ + G + G + +NG TKV VK L K+ P +AF E +
Sbjct: 2 PEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANL 57
Query: 239 VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLAR 296
+++ +H +V+ VTQ P+ I+ EY G L +L+ +L+ +K+L A +A
Sbjct: 58 MKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVS 352
GM ++ E IH +L+ NIL+ + KI+ FGL RL +Y + E AK FP+
Sbjct: 117 GMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK--FPIK 171
Query: 353 HIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGK 411
+ APE F D +SFG++L E++ G P+ EV++ + +
Sbjct: 172 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----E 220
Query: 412 RPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
R ++ + P +L +L+ CW +P RP F+ + + L+
Sbjct: 221 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 171 PMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERI 229
P T ++ E L L+V+ G G + WNGT +V +K L K PE
Sbjct: 252 PQTQGLAKDAWEIPRESLRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE-- 307
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGR-LSPSKV 287
AF E +++K RH +VQ V++ P+ IV EY +KG L +L+ + G+ L ++
Sbjct: 308 -AFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 365
Query: 288 LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPE 343
+ A +A GM Y+ +H DL+ NIL+ K++ FGL RL +Y + +
Sbjct: 366 VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 344 KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEV 402
AK FP+ + APE F D +SFG++L E+ +G P+ EV
Sbjct: 423 GAK--FPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 473
Query: 403 VKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ G R P + P L +L+ +CW +P RP F + A L+ + Q
Sbjct: 474 LD-QVERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 528
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 137/270 (50%), Gaps = 32/270 (11%)
Query: 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
+G+ KG V T+V +K ++ E+ ERI F +E +++++ +VV+ +G V+
Sbjct: 37 EGVAKGV--VKDEPETRVAIKTVN-EAASMRERIE-FLNEASVMKEFNCHHVVRLLGVVS 92
Query: 256 QNIPMMIVLEYHAKGDLASYL-------QKKGRLSP---SKVLRFALDLARGMNYLHECK 305
Q P ++++E +GDL SYL + L+P SK+++ A ++A GM YL+ K
Sbjct: 93 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 152
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLR---LQYISPEKAKIVFPVSHIDPANLYVA 362
+H DL +N ++ +KI FG+ R + K + PV +++
Sbjct: 153 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-------WMS 202
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K+ F D +SFG++L+E+ QP+ E+V++ + G L K +
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG----LLDKPDN 258
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
P L EL+ CW P +RP+F EII+ +
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 126/262 (48%), Gaps = 40/262 (15%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
KV VK+L +H D + A EL I+ +H N+V +GA T P++++ EY G
Sbjct: 78 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 271 DLASYLQKKGRL--------------SPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
DL ++L++K R+ S +L F+ +A+GM +L IH D+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 192
Query: 317 KNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+N+LL NG KI FGL R YI A++ PV ++APE + +
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVK-------WMAPESIFDCVY 243
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPP-DLKEL 429
D +S+G++L+E+ G+ P+ P +V + + ++ ++ P ++ +
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNPY----PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSI 299
Query: 430 IEECWDPKPVIRPNFNEIIARL 451
++ CW +P RP F +I + L
Sbjct: 300 MQACWALEPTHRPTFQQICSFL 321
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 130/265 (49%), Gaps = 29/265 (10%)
Query: 206 AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLE 265
++ NG +K+L KE +++ E ++ HP +++ G + ++++
Sbjct: 27 SRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD 86
Query: 266 YHAKGDLASYLQKKGRLSPSKVLRF-ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNG 324
Y G+L S L+K R P+ V +F A ++ + YLH II+ DLKP+NILLD
Sbjct: 87 YIEGGELFSLLRKSQRF-PNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKN 142
Query: 325 GQLKISGFGLLRLQYISPEKAKIVFPVSH-IDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
G +KI+ FG AK V V++ + Y+APE+ + +++S+D +SFG++
Sbjct: 143 GHIKITDFGF----------AKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL 192
Query: 384 LYEMIEGVQPFHPKPPEEVV-KLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRP 442
+YEM+ G PF+ + K++ E + PP + D+K+L+ +I
Sbjct: 193 IYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF------FNEDVKDLLSR------LITR 240
Query: 443 NFNEIIARLDRIVCNCSKQGWWKDT 467
+ ++ + L + W+K+
Sbjct: 241 DLSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILY 116
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ +K+ FGL R Y K K
Sbjct: 117 AYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 174 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 225 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 41/266 (15%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++EY +KG
Sbjct: 70 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 183
Query: 315 KPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
+N+L+ ++I+ FGL R + Y + PV ++APE +
Sbjct: 184 AARNVLVTENNVMRIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALFDRV 235
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMM 291
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIV 455
+ +CW P RP F +++ LDRI+
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 147/322 (45%), Gaps = 53/322 (16%)
Query: 161 GAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSY-QVAKWNGTK------V 213
GA K K P +P P + N ++ Q D I +G++ QV K K
Sbjct: 1 GALNRKVKNNP----DPTIYPVLDWNDIKFQ----DVIGEGNFGQVLKARIKKDGLRMDA 52
Query: 214 WVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL 272
+K + + + KD R F EL ++ K HPN++ +GA + + +EY G+L
Sbjct: 53 AIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 110
Query: 273 ASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
+L+K LS ++L FA D+ARGM+YL + IH +L
Sbjct: 111 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAA 167
Query: 317 KNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVD 376
+NIL+ KI+ FGL R Q + +K PV ++A E + + D
Sbjct: 168 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR-------WMAIESLNYSVYTTNSD 220
Query: 377 AYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEEC 433
+S+G++L+E++ G P+ E+ + + +G R PL Y +L+ +C
Sbjct: 221 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVY-----DLMRQC 274
Query: 434 WDPKPVIRPNFNEIIARLDRIV 455
W KP RP+F +I+ L+R++
Sbjct: 275 WREKPYERPSFAQILVSLNRML 296
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I++E A GDL S+L ++ R PS+
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLA 153
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 154 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 211 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 264 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 16/263 (6%)
Query: 188 LELQVRKADG----ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243
L L + DG + +G + V VK L + PE ++ F E+ +
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 244 HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLH 302
H N+++ G V PM +V E G L L+K +G + R+A+ +A GM YL
Sbjct: 80 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVA 362
+ IH DL +N+LL +KI FGL+R P+ H + A
Sbjct: 139 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHXVMQEHRKVPFAWCA 192
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K F + D + FG+ L+EM G +P+ +++ + EG+R P +
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP---RPED 249
Query: 422 YPPDLKELIEECWDPKPVIRPNF 444
P D+ ++ +CW KP RP F
Sbjct: 250 CPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I++E A GDL S+L ++ R PS+
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLA 138
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ R Y
Sbjct: 139 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 196 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 249 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 42/288 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 25 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 81
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQK K R+ K+L++ + +GM YL +
Sbjct: 82 YSAGRRNLKL--IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---Y 136
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH +L +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG---ESPIFWYAPESLTES 193
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 194 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 253
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ P ++ ++ ECW+ RP+F ++ R+D+I N + +
Sbjct: 254 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGE 297
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 116/228 (50%), Gaps = 19/228 (8%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILY 116
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP--EKAKIV 348
A L+ + YL + +H D+ +N+L+ + +K+ FGL R S + +K
Sbjct: 117 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKLMC 407
P+ ++APE F + D + FG+ ++E ++ GV+PF +V+ +
Sbjct: 174 LPIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
Query: 408 CEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 227 -NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 16/263 (6%)
Query: 188 LELQVRKADG----ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243
L L + DG + +G + V VK L + PE ++ F E+ +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 244 HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLH 302
H N+++ G V PM +V E G L L+K +G + R+A+ +A GM YL
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVA 362
+ IH DL +N+LL +KI FGL+R P+ H + A
Sbjct: 129 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHXVMQEHRKVPFAWCA 182
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE K F + D + FG+ L+EM G +P+ +++ + EG+R P +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP---RPED 239
Query: 422 YPPDLKELIEECWDPKPVIRPNF 444
P D+ ++ +CW KP RP F
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 33/306 (10%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 5 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 64
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 65 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 123
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM +L K +H DL +N +LD +K++ FGL
Sbjct: 124 IRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 180
Query: 335 LRLQYISP-----EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE 389
R Y K PV ++A E + ++F D +SFG++L+E++
Sbjct: 181 ARDMYDKEFDSVHNKTGAKLPVK-------WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEII 448
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E++
Sbjct: 234 RGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 289
Query: 449 ARLDRI 454
+R+ I
Sbjct: 290 SRISAI 295
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I++E+ G+L YL++ R
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 107
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
S V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 108 VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 165 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 216 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I++E+ G+L YL++ R
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 107
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
S V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 108 VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 165 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 216 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 30/255 (11%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T+V VK ++ ES ERI F +E ++++ +VV+ +G V++ P ++V+E A G
Sbjct: 49 TRVAVKTVN-ESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 106
Query: 271 DLASYLQK--------KGRLSPS--KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL SYL+ GR P+ ++++ A ++A GM YL+ K +H +L +N +
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCM 163
Query: 321 LDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
+ + +KI FG+ R Y + + K + PV ++APE K+ F S D
Sbjct: 164 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDM 216
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++L+E+ QP+ E+V+K + G + + P + +L+ CW
Sbjct: 217 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD----QPDNCPERVTDLMRMCWQF 272
Query: 437 KPVIRPNFNEIIARL 451
P +RP F EI+ L
Sbjct: 273 NPNMRPTFLEIVNLL 287
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 171 PMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERI 229
P T ++ E L L+V+ G G + WNGT +V +K L K + PE
Sbjct: 170 PQTQGLAKDAWEIPRESLRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGNMSPE-- 225
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKV 287
AF E +++K RH +VQ V++ P+ IV EY +KG L +L+ + G+ L ++
Sbjct: 226 -AFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 283
Query: 288 LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPE 343
+ A +A GM Y+ +H DL+ NIL+ K++ FGL RL +Y + +
Sbjct: 284 VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ 340
Query: 344 KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEV 402
AK FP+ + APE F D +SFG++L E+ +G P+ EV
Sbjct: 341 GAK--FPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 391
Query: 403 VKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ G R P + P L +L+ +CW P RP F + A L+ + Q
Sbjct: 392 LD-QVERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 446
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 23/230 (10%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGRLSPSKVLRF 290
F E + + HP++V+ +G +T+N P+ I++E G+L S+LQ +K L + ++ +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILY 496
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ----YISPEKAK 346
A L+ + YL + +H D+ +N+L+ +K+ FGL R Y K K
Sbjct: 497 AYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKL 405
+ P+ ++APE F + D + FG+ ++E ++ GV+PF +V+
Sbjct: 554 L--PIK-------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 604
Query: 406 MCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+ G+R P+ PP L L+ +CW P RP F E+ A+L I+
Sbjct: 605 IE-NGERLPMPPNC---PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 42/286 (14%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG-- 252
GS ++ +++ G V VK L H E + F E+ I++ +H N+V++ G
Sbjct: 27 GSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 83
Query: 253 --AVTQNIPMMIVLEYHAKGDLASYLQKKG-RLSPSKVLRFALDLARGMNYLHECKPDPI 309
A +N+ + ++EY G L YLQ R+ K+L++ + +GM YL +
Sbjct: 84 YSAGRRNLKL--IMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR---Y 138
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
IH DL +NIL++N ++KI FGL ++ E K+ P + + APE
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG---ESPIFWYAPESLTES 195
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPFHPKPPE----------------EVVKLMCCEGKRP 413
+F + D +SFG++LYE+ ++ P E +++L+ G+ P
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 255
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
+ P ++ ++ ECW+ RP+F ++ R+D+I N +
Sbjct: 256 ----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 30/255 (11%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T+V VK ++ ES ERI F +E ++++ +VV+ +G V++ P ++V+E A G
Sbjct: 48 TRVAVKTVN-ESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 271 DLASYLQK--------KGRLSPS--KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL SYL+ GR P+ ++++ A ++A GM YL+ K +H +L +N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCM 162
Query: 321 LDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
+ + +KI FG+ R Y + + K + PV ++APE K+ F S D
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-------WMAPESLKDGVFTTSSDM 215
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++L+E+ QP+ E+V+K + G + + P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD----QPDNCPERVTDLMRMCWQF 271
Query: 437 KPVIRPNFNEIIARL 451
P +RP F EI+ L
Sbjct: 272 NPNMRPTFLEIVNLL 286
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 171 PMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERI 229
P T ++ E L L+V+ G G + WNGT +V +K L K PE
Sbjct: 169 PQTQGLAKDAWEIPRESLRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE-- 224
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGR-LSPSKV 287
AF E +++K RH +VQ V++ P+ IV EY +KG L +L+ + G+ L ++
Sbjct: 225 -AFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 288 LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPE 343
+ A +A GM Y+ +H DL+ NIL+ K++ FGL RL +Y + +
Sbjct: 283 VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 344 KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEV 402
AK FP+ + APE F D +SFG++L E+ +G P+ EV
Sbjct: 340 GAK--FPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
Query: 403 VKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ G R P + P L +L+ +CW +P RP F + A L+ + Q
Sbjct: 391 LD-QVERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 33/306 (10%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 9 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 68
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 69 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 127
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM +L K +H DL +N +LD +K++ FGL
Sbjct: 128 IRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 184
Query: 335 LRLQYISP-----EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE 389
R Y K PV ++A E + ++F D +SFG++L+E++
Sbjct: 185 ARDMYDKEFDSVHNKTGAKLPVK-------WMALESLQTQKFTTKSDVWSFGVLLWELMT 237
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEII 448
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E++
Sbjct: 238 RGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 293
Query: 449 ARLDRI 454
+R+ I
Sbjct: 294 SRISAI 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 33/306 (10%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 63
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 122
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM +L K +H DL +N +LD +K++ FGL
Sbjct: 123 IRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 335 LRLQYISP-----EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE 389
R Y K PV ++A E + ++F D +SFG++L+E++
Sbjct: 180 ARDMYDKEFDSVHNKTGAKLPVK-------WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEII 448
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E++
Sbjct: 233 RGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
Query: 449 ARLDRI 454
+R+ I
Sbjct: 289 SRISAI 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 33/306 (10%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 63 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 122
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 123 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 181
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM +L K +H DL +N +LD +K++ FGL
Sbjct: 182 IRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 238
Query: 335 LRLQYISP-----EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE 389
R Y K PV ++A E + ++F D +SFG++L+E++
Sbjct: 239 ARDMYDKEFDSVHNKTGAKLPVK-------WMALESLQTQKFTTKSDVWSFGVLLWELMT 291
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEII 448
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E++
Sbjct: 292 RGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 347
Query: 449 ARLDRI 454
+R+ I
Sbjct: 348 SRISAI 353
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 33/306 (10%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 2 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 61
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 62 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 120
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM +L K +H DL +N +LD +K++ FGL
Sbjct: 121 IRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 177
Query: 335 LRLQYISP-----EKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE 389
R Y K PV ++A E + ++F D +SFG++L+E++
Sbjct: 178 ARDMYDKEFDSVHNKTGAKLPVK-------WMALESLQTQKFTTKSDVWSFGVLLWELMT 230
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEII 448
P +P + + +G+R + Y PD L E++ +CW PK +RP+F+E++
Sbjct: 231 RGAPPYPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
Query: 449 ARLDRI 454
+R+ I
Sbjct: 287 SRISAI 292
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK----- 286
F E I+ K H N+V+ +G Q++P I+LE A GDL S+L ++ R PS+
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLA 139
Query: 287 ---VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYI 340
+L A D+A G YL E + IH D+ +N LL G KI FG+ + Y
Sbjct: 140 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYR 196
Query: 341 SPEKAK---IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
+ K + PV ++ PE + F D +SFG++L+E+ G P+
Sbjct: 197 ASYYRKGGCAMLPVK-------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
K +EV++ + G+ P K + P + ++ +CW +P RPNF I+ R++
Sbjct: 250 KSNQEVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 30/255 (11%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T+V VK ++ ES ERI F +E ++++ +VV+ +G V++ P ++V+E A G
Sbjct: 45 TRVAVKTVN-ESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 102
Query: 271 DLASYLQK--------KGRLSPS--KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL SYL+ GR P+ ++++ A ++A GM YL+ K +H DL +N +
Sbjct: 103 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 159
Query: 321 LDNGGQLKISGFGLLR---LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
+ + +KI FG+ R + K + PV ++APE K+ F S D
Sbjct: 160 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-------WMAPESLKDGVFTTSSDM 212
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++L+E+ QP+ E+V+K + G + + P + +L+ CW
Sbjct: 213 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD----QPDNCPERVTDLMRMCWQF 268
Query: 437 KPVIRPNFNEIIARL 451
P +RP F EI+ L
Sbjct: 269 NPKMRPTFLEIVNLL 283
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 41/266 (15%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++ Y +KG
Sbjct: 70 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKG 126
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 183
Query: 315 KPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
+N+L+ +KI+ FGL R + Y + PV ++APE +
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALFDRV 235
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMM 291
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIV 455
+ +CW P RP F +++ LDRI+
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
S V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 108 VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 165 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 216 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
S V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 108 VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 165 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 216 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 112
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
S V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 113 VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 170 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 221 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 25/238 (10%)
Query: 227 ERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR-LSPS 285
E+ F E+ I+ HPN+V+ G + N P M V+E+ GDL L K + S
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRM-VMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 286 KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ-----LKISGFGLLRLQYI 340
LR LD+A G+ Y+ P PI+H DL+ NI L + + K++ FG
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFG------- 174
Query: 341 SPEKAKIVFPVSHIDPANLYVAPEIYKNEE--FDRSVDAYSFGLILYEMIEGVQPFHPKP 398
+ V VS + ++APE EE + D YSF +ILY ++ G PF
Sbjct: 175 --TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
Query: 399 PEEV--VKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
++ + ++ EG RP + PP L+ +IE CW P RP+F+ I+ L +
Sbjct: 233 YGKIKFINMIREEGLRPTI---PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHEL 236
++V E L+L R +G G + WNG TKV +K L K PE +F E
Sbjct: 1 KDVWEIPRESLQLIKRLGNG-QFGEVWMGTWNGNTKVAIKTL-KPGTMSPE---SFLEEA 55
Query: 237 TIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGR-LSPSKVLRFALDL 294
I++K +H +VQ V++ P+ IV EY KG L +L+ +GR L ++ A +
Sbjct: 56 QIMKKLKHDKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQV 114
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFP 350
A GM Y+ IH DL+ NIL+ NG KI+ FGL RL + + + AK FP
Sbjct: 115 AAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAK--FP 169
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCE 409
+ + APE F D +SFG++L E++ +G P+ EV++
Sbjct: 170 IK-------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLE-QVER 221
Query: 410 GKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
G R P + P L EL+ CW P RP F + + L+
Sbjct: 222 GYRMPC---PQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 35/292 (11%)
Query: 179 EVPEYELNPLE-LQVRKADGITKGSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHEL 236
EVP L +E L +A + G Y NG TKV VK L K+ P +AF E
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYY-----NGHTKVAVKSL-KQGSMSP---DAFLAEA 59
Query: 237 TIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDL 294
++++ +H +V+ VTQ P+ I+ EY G L +L+ +L+ +K+L A +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFP 350
A GM ++ E IH DL+ NIL+ + KI+ FGL RL + + E AK FP
Sbjct: 119 AEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAK--FP 173
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCE 409
+ + APE F D +SFG++L E++ G P+ EV++ +
Sbjct: 174 IK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--- 223
Query: 410 GKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+R ++ + P +L +L+ CW +P RP F+ + + L+ Q
Sbjct: 224 -ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQ 274
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 30/255 (11%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T+V VK ++ ES ERI F +E ++++ +VV+ +G V++ P ++V+E A G
Sbjct: 48 TRVAVKTVN-ESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 271 DLASYLQK--------KGRLSPS--KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL SYL+ GR P+ ++++ A ++A GM YL+ K +H DL +N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 162
Query: 321 LDNGGQLKISGFGLLR---LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
+ + +KI FG+ R + K + PV ++APE K+ F S D
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-------WMAPESLKDGVFTTSSDM 215
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++L+E+ QP+ E+V+K + G + + P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD----QPDNCPERVTDLMRMCWQF 271
Query: 437 KPVIRPNFNEIIARL 451
P +RP F EI+ L
Sbjct: 272 NPNMRPTFLEIVNLL 286
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 30/255 (11%)
Query: 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
T+V VK ++ ES ERI F +E ++++ +VV+ +G V++ P ++V+E A G
Sbjct: 48 TRVAVKTVN-ESASLRERIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 271 DLASYLQK--------KGRLSPS--KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL SYL+ GR P+ ++++ A ++A GM YL+ K +H DL +N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCM 162
Query: 321 LDNGGQLKISGFGLLR---LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
+ + +KI FG+ R + K + PV ++APE K+ F S D
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-------WMAPESLKDGVFTTSSDM 215
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++L+E+ QP+ E+V+K + G + + P + +L+ CW
Sbjct: 216 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD----QPDNCPERVTDLMRMCWQF 271
Query: 437 KPVIRPNFNEIIARL 451
P +RP F EI+ L
Sbjct: 272 NPKMRPTFLEIVNLL 286
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 20 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV+EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 181
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 240
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW P RP F + A L+ + Q
Sbjct: 241 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 41/266 (15%)
Query: 213 VWVKIL-DKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
V VK+L D + KD ++ E+ +++ +H N++ +GA TQ+ P+ +++ Y +KG
Sbjct: 70 VAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKG 126
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+L YL+ + +++ ++ LARGM YL K IH DL
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDL 183
Query: 315 KPKNILLDNGGQLKISGFGLLR----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
+N+L+ +KI+ FGL R + Y + PV ++APE +
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVK-------WMAPEALFDRV 235
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +SFG++++E+ G P+ P EE+ KL+ EG R K + +L +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KEGHRMD---KPANCTNELYMM 291
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIV 455
+ +CW P RP F +++ LDRI+
Sbjct: 292 MRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 35 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 89
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 146
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL + + E AK FP+ + APE F
Sbjct: 147 NILVSDTLSCKIADFGLARLIEDNEXTAREGAK--FPIK-------WTAPEAINYGTFTI 197
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 198 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 253
Query: 433 CWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
CW +P RP F+ + + L+ Q
Sbjct: 254 CWKERPEDRPTFDYLRSVLEDFFTATEGQ 282
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL + + E AK FP+ + APE F
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEXTAREGAK--FPIK-------WTAPEAINYGTFTI 189
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 245
Query: 433 CWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
CW +P RP F+ + + L+ Q
Sbjct: 246 CWKERPEDRPTFDYLRSVLEDFFTATEGQ 274
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 13 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 67
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 68 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 127 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 174
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 233
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW +P RP F + A L+ + Q
Sbjct: 234 ---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 272
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 36 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 90
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 147
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL + + E AK FP+ + APE F
Sbjct: 148 NILVSDTLSCKIADFGLARLIEDNEXTAREGAK--FPIK-------WTAPEAINYGTFTI 198
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 199 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 254
Query: 433 CWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
CW +P RP F+ + + L+ Q
Sbjct: 255 CWKERPEDRPTFDYLRSVLEDFFTATEGQ 283
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 33 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 87
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 144
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL + + E AK FP+ + APE F
Sbjct: 145 NILVSDTLSCKIADFGLARLIEDNEXTAREGAK--FPIK-------WTAPEAINYGTFTI 195
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 251
Query: 433 CWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
CW +P RP F+ + + L+ Q
Sbjct: 252 CWKERPEDRPTFDYLRSVLEDFFTATEGQ 280
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 36/258 (13%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
KV VK+L +H D + A EL I+ +H N+V +GA T P++++ EY G
Sbjct: 70 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 271 DLASYLQKK---------GR-LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL ++L++K GR L +L F+ +A+GM +L IH D+ +N+L
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 184
Query: 321 LDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSV 375
L NG KI FGL R YI A++ PV ++APE + +
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVK-------WMAPESIFDCVYTVQS 235
Query: 376 DAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPP-DLKELIEEC 433
D +S+G++L+E+ G+ P+ P +V + + ++ ++ P ++ +++ C
Sbjct: 236 DVWSYGILLWEIFSLGLNPY----PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC 291
Query: 434 WDPKPVIRPNFNEIIARL 451
W +P RP F +I + L
Sbjct: 292 WALEPTHRPTFQQICSFL 309
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 29/260 (11%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 28 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 82
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 139
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL + + E AK FP+ + APE F
Sbjct: 140 NILVSDTLSCKIADFGLARLIEDNEXTAREGAK--FPIK-------WTAPEAINYGTFTI 190
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 191 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 246
Query: 433 CWDPKPVIRPNFNEIIARLD 452
CW +P RP F+ + + L+
Sbjct: 247 CWKERPEDRPTFDYLRSVLE 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 29/260 (11%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 27 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL + + E AK FP+ + APE F
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEXTAREGAK--FPIK-------WTAPEAINYGTFTI 189
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 245
Query: 433 CWDPKPVIRPNFNEIIARLD 452
CW +P RP F+ + + L+
Sbjct: 246 CWKERPEDRPTFDYLRSVLE 265
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 25/238 (10%)
Query: 227 ERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR-LSPS 285
E+ F E+ I+ HPN+V+ G + N P M V+E+ GDL L K + S
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRM-VMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 286 KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ-----LKISGFGLLRLQYI 340
LR LD+A G+ Y+ P PI+H DL+ NI L + + K++ F L
Sbjct: 123 VKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSL------ 175
Query: 341 SPEKAKIVFPVSHIDPANLYVAPEIYKNEE--FDRSVDAYSFGLILYEMIEGVQPFHPKP 398
+ V VS + ++APE EE + D YSF +ILY ++ G PF
Sbjct: 176 ---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
Query: 399 PEEV--VKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
++ + ++ EG RP + PP L+ +IE CW P RP+F+ I+ L +
Sbjct: 233 YGKIKFINMIREEGLRPTI---PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I++E+ G+L YL++ R
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 112
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 113 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 170 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 221 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 36/258 (13%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
KV VK+L +H D + A EL I+ +H N+V +GA T P++++ EY G
Sbjct: 78 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 271 DLASYLQKK---------GR-LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL 320
DL ++L++K GR L +L F+ +A+GM +L IH D+ +N+L
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 192
Query: 321 LDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSV 375
L NG KI FGL R YI A++ PV ++APE + +
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVK-------WMAPESIFDCVYTVQS 243
Query: 376 DAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPP-DLKELIEEC 433
D +S+G++L+E+ G+ P+ P +V + + ++ ++ P ++ +++ C
Sbjct: 244 DVWSYGILLWEIFSLGLNPY----PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC 299
Query: 434 WDPKPVIRPNFNEIIARL 451
W +P RP F +I + L
Sbjct: 300 WALEPTHRPTFQQICSFL 317
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 29/260 (11%)
Query: 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259
G + +NG TKV VK L K+ P +AF E ++++ +H +V+ VTQ P
Sbjct: 29 GEVWMGYYNGHTKVAVKSL-KQGSMSP---DAFLAEANLMKQLQHQRLVRLYAVVTQE-P 83
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
+ I+ EY G L +L+ +L+ +K+L A +A GM ++ E IH DL+
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 140
Query: 318 NILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
NIL+ + KI+ FGL RL + + E AK FP+ + APE F
Sbjct: 141 NILVSDTLSCKIADFGLARLIEDNEXTAREGAK--FPIK-------WTAPEAINYGTFTI 191
Query: 374 SVDAYSFGLILYEMI-EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
D +SFG++L E++ G P+ EV++ + +R ++ + P +L +L+
Sbjct: 192 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYRMVRPDNCPEELYQLMRL 247
Query: 433 CWDPKPVIRPNFNEIIARLD 452
CW +P RP F+ + + L+
Sbjct: 248 CWKERPEDRPTFDYLRSVLE 267
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 129/275 (46%), Gaps = 31/275 (11%)
Query: 201 GSYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
GS ++ +++ G V VK L H P++ F E+ I++ +V++ G
Sbjct: 24 GSVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIVKYRGVS 80
Query: 255 TQ--NIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ +V+EY G L +LQ+ + RL S++L ++ + +GM YL + +H
Sbjct: 81 YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVH 137
Query: 312 CDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEF 371
DL +NIL+++ +KI+ FGL +L + +K V P Y APE + F
Sbjct: 138 RDLAARNILVESEAHVKIADFGLAKL--LPLDKDYYVVREPGQSPIFWY-APESLSDNIF 194
Query: 372 DRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKAR----------- 420
R D +SFG++LYE+ P E +++M E P L
Sbjct: 195 SRQSDVWSFGVVLYELFTYCDK-SCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAP 253
Query: 421 -SYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ P ++ EL++ CW P P RP+F+ + +LD +
Sbjct: 254 PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 288
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 141/301 (46%), Gaps = 23/301 (7%)
Query: 167 TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW------NGTKVWVKI 217
T ++ NP + V + P L V + I +G + +G K+ +
Sbjct: 5 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 64
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKGDLASY 275
D ++ F E I++ HPNV+ +G ++ P+ +VL Y GDL ++
Sbjct: 65 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNF 123
Query: 276 LQKKGRLSPSK-VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
++ + K ++ F L +A+GM +L K +H DL +N +LD +K++ FGL
Sbjct: 124 IRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGL 180
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
R + E + P ++A E + ++F D +SFG++L+E++ P
Sbjct: 181 AR-DMLDKEFDSVHNKTGAKLPVK-WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 238
Query: 395 HPKPPEEVVKLMCCEGKRPPLKIKARSYPPD-LKELIEECWDPKPVIRPNFNEIIARLDR 453
+P + + +G+R + Y PD L E++ +CW PK +RP+F+E+++R+
Sbjct: 239 YPDVNTFDITVYLLQGRR----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 294
Query: 454 I 454
I
Sbjct: 295 I 295
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 20/227 (8%)
Query: 190 LQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQ 249
QVRK G G K KV K + + KD A E I+E+ +HP +V
Sbjct: 34 FQVRKVTGANTG-----KIFAMKVLKKAMIVRNAKDTAHTKA---ERNILEEVKHPFIVD 85
Query: 250 FVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
+ A + ++LEY + G+L L+++G + +++ + +LH+ I
Sbjct: 86 LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ---KGI 142
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL-YVAPEIYKN 368
I+ DLKP+NI+L++ G +K++ FGL + V+H + Y+APEI
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG-------TVTHTFCGTIEYMAPEILMR 195
Query: 369 EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV-KLMCCEGKRPP 414
+R+VD +S G ++Y+M+ G PF + ++ + K++ C+ PP
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 20 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKIRHEK 74
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 181
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 240
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW P RP F + A L+ + Q
Sbjct: 241 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 131/273 (47%), Gaps = 30/273 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 20 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV+EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 181
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 240
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P L +L+ +CW P RP F + A L+
Sbjct: 241 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 11 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 65
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 66 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 125 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 172
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 231
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW P RP F + A L+ + Q
Sbjct: 232 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 30/273 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 20 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 181
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 240
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P L +L+ +CW P RP F + A L+
Sbjct: 241 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 20 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 181
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 240
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW P RP F + A L+ + Q
Sbjct: 241 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 50 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 110 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 167 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 218 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 42/266 (15%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VK+L +H ER A EL ++ H N+V +GA T P +++ EY GD
Sbjct: 56 VAVKMLKPSAHLT-ER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 113
Query: 272 LASYLQKK------GRLSPSKV------------LRFALDLARGMNYLHECKPDPIIHCD 313
L ++L++K + SP+ + L F+ +A+GM +L IH D
Sbjct: 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 170
Query: 314 LKPKNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKN 368
L +NILL +G KI FGL R Y+ A++ PV ++APE N
Sbjct: 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL--PVK-------WMAPESIFN 221
Query: 369 EEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLK 427
+ D +S+G+ L+E+ G P+ P + M EG R + P ++
Sbjct: 222 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR---MLSPEHAPAEMY 278
Query: 428 ELIEECWDPKPVIRPNFNEIIARLDR 453
++++ CWD P+ RP F +I+ +++
Sbjct: 279 DIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 112
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 113 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 170 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 221 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 42/266 (15%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VK+L +H ER A EL ++ H N+V +GA T P +++ EY GD
Sbjct: 72 VAVKMLKPSAHLT-ER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 129
Query: 272 LASYLQKK------GRLSPSKV------------LRFALDLARGMNYLHECKPDPIIHCD 313
L ++L++K + SP+ + L F+ +A+GM +L IH D
Sbjct: 130 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 186
Query: 314 LKPKNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKN 368
L +NILL +G KI FGL R Y+ A++ PV ++APE N
Sbjct: 187 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL--PVK-------WMAPESIFN 237
Query: 369 EEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLK 427
+ D +S+G+ L+E+ G P+ P + M EG R + P ++
Sbjct: 238 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR---MLSPEHAPAEMY 294
Query: 428 ELIEECWDPKPVIRPNFNEIIARLDR 453
++++ CWD P+ RP F +I+ +++
Sbjct: 295 DIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 50 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 110 VNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 167 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 218 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 20/227 (8%)
Query: 190 LQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQ 249
QVRK G G K KV K + + KD A E I+E+ +HP +V
Sbjct: 34 FQVRKVTGANTG-----KIFAMKVLKKAMIVRNAKDTAHTKA---ERNILEEVKHPFIVD 85
Query: 250 FVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPI 309
+ A + ++LEY + G+L L+++G + +++ + +LH+ I
Sbjct: 86 LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ---KGI 142
Query: 310 IHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL-YVAPEIYKN 368
I+ DLKP+NI+L++ G +K++ FGL + V+H + Y+APEI
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG-------TVTHXFCGTIEYMAPEILMR 195
Query: 369 EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV-KLMCCEGKRPP 414
+R+VD +S G ++Y+M+ G PF + ++ + K++ C+ PP
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 9 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 63
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 64 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 123 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 170
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 229
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW P RP F + A L+ + Q
Sbjct: 230 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 108 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 165 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 216 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 235 ELTIVEKA------RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVL 288
E T+VEK HP + + V+EY GDL ++Q + S+
Sbjct: 62 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 121
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+A ++ G+ +LH I++ DLK NILLD G +KI+ FG+ + + K
Sbjct: 122 FYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF 178
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
Y+APEI ++++ SVD +SFG++LYEM+ G PFH + EE+
Sbjct: 179 CGTPD------YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 108 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 165 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 216 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 126/264 (47%), Gaps = 42/264 (15%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
KV VK+L +H D + A EL I+ +H N+V +GA T P++++ EY G
Sbjct: 78 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 271 DLASYLQKK----------------GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
DL ++L++K +LS +L F+ +A+GM +L IH D+
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDV 192
Query: 315 KPKNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNE 369
+N+LL NG KI FGL R YI A++ PV ++APE +
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVK-------WMAPESIFDC 243
Query: 370 EFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPP-DLK 427
+ D +S+G++L+E+ G+ P+ P +V + + ++ ++ P ++
Sbjct: 244 VYTVQSDVWSYGILLWEIFSLGLNPY----PGILVNSKFYKLVKDGYQMAQPAFAPKNIY 299
Query: 428 ELIEECWDPKPVIRPNFNEIIARL 451
+++ CW +P RP F +I + L
Sbjct: 300 SIMQACWALEPTHRPTFQQICSFL 323
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 112
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 113 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 170 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 221 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 30/294 (10%)
Query: 177 PREVPEYELNPLELQVRKADGITK-GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTH 234
P E +E+ L++ K G + G +A +N TKV VK + S + AF
Sbjct: 177 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLA 232
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSP-SKVLRFAL 292
E +++ +H +V+ VT+ P+ I+ E+ AKG L +L+ +G P K++ F+
Sbjct: 233 EANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 291
Query: 293 DLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIV 348
+A GM ++ + IH DL+ NIL+ KI+ FGL R+ +Y + E AK
Sbjct: 292 QIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK-- 346
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMC 407
FP+ + APE F D +SFG++L E++ G P+ EV++ +
Sbjct: 347 FPIK-------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 399
Query: 408 CEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
G R P + + P +L ++ CW +P RP F I + LD Q
Sbjct: 400 -RGYRMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQ 449
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 61 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 120
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 121 VNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 177
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 178 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 228
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 229 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 42/266 (15%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VK+L +H ER A EL ++ H N+V +GA T P +++ EY GD
Sbjct: 74 VAVKMLKPSAHLT-ER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 131
Query: 272 LASYLQKK------GRLSPSKV------------LRFALDLARGMNYLHECKPDPIIHCD 313
L ++L++K + SP+ + L F+ +A+GM +L IH D
Sbjct: 132 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 188
Query: 314 LKPKNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKN 368
L +NILL +G KI FGL R Y+ A++ PV ++APE N
Sbjct: 189 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL--PVK-------WMAPESIFN 239
Query: 369 EEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLK 427
+ D +S+G+ L+E+ G P+ P + M EG R + P ++
Sbjct: 240 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR---MLSPEHAPAEMY 296
Query: 428 ELIEECWDPKPVIRPNFNEIIARLDR 453
++++ CWD P+ RP F +I+ +++
Sbjct: 297 DIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 52 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 111
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 112 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 168
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 169 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 219
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 220 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 AFGNLKNGVNDIKNHKWFATT 300
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 255 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 314
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
S V L A ++ M YL + IH +L +N L+ +K++ FGL RL
Sbjct: 315 VSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 372 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 423 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 42/266 (15%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VK+L +H ER A EL ++ H N+V +GA T P +++ EY GD
Sbjct: 79 VAVKMLKPSAHLT-ER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 136
Query: 272 LASYLQKK------GRLSPSKV------------LRFALDLARGMNYLHECKPDPIIHCD 313
L ++L++K + SP+ + L F+ +A+GM +L IH D
Sbjct: 137 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 193
Query: 314 LKPKNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKN 368
L +NILL +G KI FGL R Y+ A++ PV ++APE N
Sbjct: 194 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL--PVK-------WMAPESIFN 244
Query: 369 EEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLK 427
+ D +S+G+ L+E+ G P+ P + M EG R + P ++
Sbjct: 245 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR---MLSPEHAPAEMY 301
Query: 428 ELIEECWDPKPVIRPNFNEIIARLDR 453
++++ CWD P+ RP F +I+ +++
Sbjct: 302 DIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 31/290 (10%)
Query: 177 PREVPEYELNPLELQVRKADG------ITKGSYQVAKWNGTKVWVKILDKESHKDPERIN 230
PR P+Y + ++ + + G + +G Y K V VK K+ D +
Sbjct: 13 PRGSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE-- 70
Query: 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLR 289
F E I++ HP++V+ +G + + P I++E + G+L YL++ K L ++
Sbjct: 71 KFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVL 129
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPE---KAK 346
++L + + M YL +H D+ +NIL+ + +K+ FGL R YI E KA
Sbjct: 130 YSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSR--YIEDEDYYKAS 184
Query: 347 IV-FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVK 404
+ P+ +++PE F + D + F + ++E++ G QPF ++V+
Sbjct: 185 VTRLPIK-------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG 237
Query: 405 LMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
++ +G R P K PP L L+ CWD P RP F E++ L +
Sbjct: 238 VLE-KGDRLP---KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I++E+ G+L YL++ R
Sbjct: 49 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE 108
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY-- 339
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 109 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
Query: 340 ISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKP 398
A FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 166 TXTAHAGAKFPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 218
Query: 399 PEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 219 LSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 42/266 (15%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VK+L +H ER A EL ++ H N+V +GA T P +++ EY GD
Sbjct: 79 VAVKMLKPSAHLT-ER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 136
Query: 272 LASYLQKK------GRLSPSKV------------LRFALDLARGMNYLHECKPDPIIHCD 313
L ++L++K + SP+ + L F+ +A+GM +L IH D
Sbjct: 137 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRD 193
Query: 314 LKPKNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVAPEIYKN 368
L +NILL +G KI FGL R Y+ A++ PV ++APE N
Sbjct: 194 LAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL--PVK-------WMAPESIFN 244
Query: 369 EEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLK 427
+ D +S+G+ L+E+ G P+ P + M EG R + P ++
Sbjct: 245 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR---MLSPEHAPAEMY 301
Query: 428 ELIEECWDPKPVIRPNFNEIIARLDR 453
++++ CWD P+ RP F +I+ +++
Sbjct: 302 DIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
GD+ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G +K
Sbjct: 125 GGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIK 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VADFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 84 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 144 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 200
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 201 IQVTDFGFAK---------RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 252 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 300
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 301 RFGNLKNGVNDIKNHKWFATT 321
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
GD+ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G +K
Sbjct: 125 GGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIK 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VADFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 20 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 134 N---YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 181
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 240
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW P RP F + A L+ + Q
Sbjct: 241 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 235 ELTIVEKA------RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVL 288
E T+VEK HP + + V+EY GDL ++Q + S+
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 122
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+A ++ G+ +LH I++ DLK NILLD G +KI+ FG+ + + K
Sbjct: 123 FYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--- 176
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+ Y+APEI ++++ SVD +SFG++LYEM+ G PFH + EE+
Sbjct: 177 ---NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 30/273 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 20 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 181
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 240
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
P L +L+ +CW P RP F + A L+
Sbjct: 241 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 17 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 71
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY KG L +L+ + G+ L +++ + +A GM Y+
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL +Y + + AK FP+ +
Sbjct: 131 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK--FPIK-------W 178
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 237
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW +P RP F + A L+ + Q
Sbjct: 238 ---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 276
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADEPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 35/262 (13%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 271 DLASYLQ-KKGRLSPSK-----------VLRFALDLARGMNYLHECKPDPIIHCDLKPKN 318
+L++YL+ K+ P K ++ ++ +A+GM +L K IH DL +N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAARN 174
Query: 319 ILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSV 375
ILL +KI FGL R Y P+ K P+ ++APE + +
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK-------WMAPETIFDRVYTIQS 227
Query: 376 DAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKELIEEC 433
D +SFG++L+E+ G P+ +E EG R ++A Y P++ + + +C
Sbjct: 228 DVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTR----MRAPDYTTPEMYQTMLDC 283
Query: 434 WDPKPVIRPNFNEIIARLDRIV 455
W +P RP F+E++ L ++
Sbjct: 284 WHGEPSQRPTFSELVEHLGNLL 305
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 17/224 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M G PF P ++ + + R P + DLK+L+
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 269
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 64 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 124 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 180
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 181 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 280
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 281 RFGNLKNGVNDIKNHKWFATT 301
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 53 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 112
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY-- 339
+ V L A ++ M YL + IH DL +N L+ +K++ FGL RL
Sbjct: 113 VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 340 ISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKP 398
A FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 170 TXTAHAGAKFPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 399 PEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 223 LSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 137/285 (48%), Gaps = 30/285 (10%)
Query: 177 PREVPEYELNPLELQVRKADGITK-GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTH 234
P E +E+ L++ K G + G +A +N TKV VK + S + AF
Sbjct: 4 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLA 59
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSP-SKVLRFAL 292
E +++ +H +V+ VT+ P+ I+ E+ AKG L +L+ +G P K++ F+
Sbjct: 60 EANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 118
Query: 293 DLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIV 348
+A GM ++ + IH DL+ NIL+ KI+ FGL R+ +Y + E AK
Sbjct: 119 QIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK-- 173
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMC 407
FP+ + APE F D +SFG++L E++ G P+ EV++ +
Sbjct: 174 FPIK-------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 226
Query: 408 CEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLD 452
G R P + + P +L ++ CW +P RP F I + LD
Sbjct: 227 -RGYRMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 110/222 (49%), Gaps = 17/222 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY A
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
G PF P ++ + + R P + DLK+L+
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 269
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 17/224 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 50 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 109
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 110 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDEQGY 166
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 167 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 217
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M G PF P ++ + + R P + DLK+L+
Sbjct: 218 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 256
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ +RHP + + + + V+EY
Sbjct: 170 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ S + + ++ ++YLH K +++ DLK +N++LD G
Sbjct: 230 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGH 287
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + E K + Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 288 IKITDFGLCK------EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E++ +L+ E R P R+ P+ K L+
Sbjct: 342 MMCGRLPFYNQDHEKLFELILMEEIRFP-----RTLGPEAKSLL 380
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 252 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 311
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH +L +N L+ +K++ FGL RL
Sbjct: 312 VNAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 368
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 369 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 419
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 420 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 20 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 74
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK-GR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV+EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL + + + AK FP+ +
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAK--FPIK-------W 181
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 240
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW P RP F + A L+ + Q
Sbjct: 241 ---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 183 YELNPLELQVRKADGITK-GSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVE 240
+E++P +L K G + G + KW G V +K++ + S + E F E ++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 59
Query: 241 KARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMN 299
H +VQ G T+ P+ I+ EY A G L +YL++ + R ++L D+ M
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 300 YLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHID 355
YL + +H DL +N L+++ G +K+S FGL R +Y S +K FPV
Sbjct: 120 YL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSK--FPVR--- 171
Query: 356 PANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPP 414
+ PE+ +F D ++FG++++E+ G P+ E +
Sbjct: 172 ----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---------H 218
Query: 415 LKIKARSYPPDLKE-----LIEECWDPKPVIRPNFNEIIARL 451
+ R Y P L ++ CW K RP F +++ +
Sbjct: 219 IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ +RHP + + + + V+EY
Sbjct: 173 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 232
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ S + + ++ ++YLH K +++ DLK +N++LD G
Sbjct: 233 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGH 290
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + E K + Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 291 IKITDFGLCK------EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 344
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E++ +L+ E R P R+ P+ K L+
Sbjct: 345 MMCGRLPFYNQDHEKLFELILMEEIRFP-----RTLGPEAKSLL 383
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 10 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 64
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY +KG L +L+ + G+ L +++ A +A GM Y+
Sbjct: 65 LVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL + + + AK FP+ +
Sbjct: 124 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAK--FPIK-------W 171
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 230
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW +P RP F + A L+ + Q
Sbjct: 231 ---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 269
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 25/263 (9%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ +G Y K V VK K+ D + F E I++ HP++V+ +G + +
Sbjct: 24 VYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIGIIEEE 81
Query: 258 IPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
P I++E + G+L YL++ K L ++ ++L + + M YL +H D+
Sbjct: 82 -PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAV 137
Query: 317 KNILLDNGGQLKISGFGLLRLQYISPE---KAKIV-FPVSHIDPANLYVAPEIYKNEEFD 372
+NIL+ + +K+ FGL R YI E KA + P+ +++PE F
Sbjct: 138 RNILVASPECVKLGDFGLSR--YIEDEDYYKASVTRLPIK-------WMSPESINFRRFT 188
Query: 373 RSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIE 431
+ D + F + ++E++ G QPF ++V+ ++ +G R P K PP L L+
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-KGDRLP---KPDLCPPVLYTLMT 244
Query: 432 ECWDPKPVIRPNFNEIIARLDRI 454
CWD P RP F E++ L +
Sbjct: 245 RCWDYDPSDRPRFTELVCSLSDV 267
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 36/241 (14%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL--------------- 276
F HE + + +HPNVV +G VT++ P+ ++ Y + GDL +L
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 277 -QKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
K L P + +A GM YL ++H DL +N+L+ + +KIS GL
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 336 RLQYISPEKAKI---VFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GV 391
R Y + + + P+ ++APE +F D +S+G++L+E+ G+
Sbjct: 176 REVYAADYYKLLGNSLLPIR-------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228
Query: 392 QPFHPKPPEEVVKLMCCEGKRP-PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
QP+ ++VV+++ P P A Y L+ ECW+ P RP F +I +R
Sbjct: 229 QPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYA-----LMIECWNEFPSRRPRFKDIHSR 283
Query: 451 L 451
L
Sbjct: 284 L 284
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 126/262 (48%), Gaps = 35/262 (13%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 271 DLASYLQ-KKGRLSPSK-----------VLRFALDLARGMNYLHECKPDPIIHCDLKPKN 318
+L++YL+ K+ P K ++ ++ +A+GM +L K IH DL +N
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK---XIHRDLAARN 174
Query: 319 ILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSV 375
ILL +KI FGL R Y P+ K P+ ++APE + +
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------WMAPETIFDRVYTIQS 227
Query: 376 DAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKELIEEC 433
D +SFG++L+E+ G P+ P + C + +++A Y P++ + + +C
Sbjct: 228 DVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC 283
Query: 434 WDPKPVIRPNFNEIIARLDRIV 455
W +P RP F+E++ L ++
Sbjct: 284 WHGEPSQRPTFSELVEHLGNLL 305
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 36/241 (14%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL--------------- 276
F HE + + +HPNVV +G VT++ P+ ++ Y + GDL +L
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135
Query: 277 -QKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
K L P + +A GM YL ++H DL +N+L+ + +KIS GL
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLF 192
Query: 336 RLQYISPEKAKI---VFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GV 391
R Y + + + P+ ++APE +F D +S+G++L+E+ G+
Sbjct: 193 REVYAADYYKLLGNSLLPIR-------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245
Query: 392 QPFHPKPPEEVVKLMCCEGKRP-PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
QP+ ++VV+++ P P A Y L+ ECW+ P RP F +I +R
Sbjct: 246 QPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYA-----LMIECWNEFPSRRPRFKDIHSR 300
Query: 451 L 451
L
Sbjct: 301 L 301
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 39/272 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 271 DLASYLQ-KKGRLSPSKV---------------LRFALDLARGMNYLHECKPDPIIHCDL 314
+L++YL+ K+ P KV + ++ +A+GM +L K IH DL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+NILL +KI FGL R Y P+ K P+ ++APE + +
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK-------WMAPETIFDRVY 227
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKEL 429
D +SFG++L+E+ G P+ P + C + +++A Y P++ +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 283
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW +P RP F+E++ L ++ ++Q
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++Y+
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQ 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS 283
+D + F E ++++ +HPN+VQ +G T+ P I+ E+ G+L YL++ R
Sbjct: 294 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 353
Query: 284 PSKV--LRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ--- 338
+ V L A ++ M YL + IH +L +N L+ +K++ FGL RL
Sbjct: 354 VNAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 410
Query: 339 -YISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHP 396
Y + AK FP+ + APE +F D ++FG++L+E+ G+ P+
Sbjct: 411 TYTAHAGAK--FPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 461
Query: 397 KPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+V +L+ ++ + P + EL+ CW P RP+F EI
Sbjct: 462 IDLSQVYELL----EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 112/224 (50%), Gaps = 17/224 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+++D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLIIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M G PF P ++ + + R P + DLK+L+
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 269
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 39/272 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 271 DLASYLQ-KKGRLSPSKV---------------LRFALDLARGMNYLHECKPDPIIHCDL 314
+L++YL+ K+ P KV + ++ +A+GM +L K IH DL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+NILL +KI FGL R Y P+ K P+ ++APE + +
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------WMAPETIFDRVY 227
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKEL 429
D +SFG++L+E+ G P+ P + C + +++A Y P++ +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 283
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW +P RP F+E++ L ++ ++Q
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 39/272 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 97 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 271 DLASYLQ-KKGRLSPSKV---------------LRFALDLARGMNYLHECKPDPIIHCDL 314
+L++YL+ K+ P KV + ++ +A+GM +L K IH DL
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 211
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+NILL +KI FGL R Y P+ K P+ ++APE + +
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------WMAPETIFDRVY 264
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKEL 429
D +SFG++L+E+ G P+ P + C + +++A Y P++ +
Sbjct: 265 TIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 320
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW +P RP F+E++ L ++ ++Q
Sbjct: 321 MLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 352
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 25/263 (9%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ +G Y K V VK K+ D + F E I++ HP++V+ +G + +
Sbjct: 28 VYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVKLIGIIEEE 85
Query: 258 IPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
P I++E + G+L YL++ K L ++ ++L + + M YL +H D+
Sbjct: 86 -PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAV 141
Query: 317 KNILLDNGGQLKISGFGLLRLQYISPE---KAKIV-FPVSHIDPANLYVAPEIYKNEEFD 372
+NIL+ + +K+ FGL R YI E KA + P+ +++PE F
Sbjct: 142 RNILVASPECVKLGDFGLSR--YIEDEDYYKASVTRLPIK-------WMSPESINFRRFT 192
Query: 373 RSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIE 431
+ D + F + ++E++ G QPF ++V+ ++ +G R P K PP L L+
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-KGDRLP---KPDLCPPVLYTLMT 248
Query: 432 ECWDPKPVIRPNFNEIIARLDRI 454
CWD P RP F E++ L +
Sbjct: 249 RCWDYDPSDRPRFTELVCSLSDV 271
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR + +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ +RHP + + + + V+EY
Sbjct: 30 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 89
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ S + + ++ ++YLH K +++ DLK +N++LD G
Sbjct: 90 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGH 147
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + E K + Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 148 IKITDFGLCK------EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 201
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E++ +L+ E R P R+ P+ K L+
Sbjct: 202 MMCGRLPFYNQDHEKLFELILMEEIRFP-----RTLGPEAKSLL 240
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ +RHP + + + + V+EY
Sbjct: 31 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 90
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ S + + ++ ++YLH K +++ DLK +N++LD G
Sbjct: 91 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGH 148
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + E K + Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 149 IKITDFGLCK------EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E++ +L+ E R P R+ P+ K L+
Sbjct: 203 MMCGRLPFYNQDHEKLFELILMEEIRFP-----RTLGPEAKSLL 241
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 39/272 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 271 DLASYLQ-KKGRLSPSKV---------------LRFALDLARGMNYLHECKPDPIIHCDL 314
+L++YL+ K+ P KV + ++ +A+GM +L K IH DL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+NILL +KI FGL R Y P+ K P+ ++APE + +
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------WMAPETIFDRVY 218
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKEL 429
D +SFG++L+E+ G P+ P + C + +++A Y P++ +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 274
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW +P RP F+E++ L ++ ++Q
Sbjct: 275 MLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
+G +K+L K + K +R+ E I+ HP VV+ A + ++L++
Sbjct: 55 SGHLYAMKVLKKATLKVRDRVRT-KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLR 113
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
GDL + L K+ + V + +LA G+++LH II+ DLKP+NILLD G +K
Sbjct: 114 GGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLG---IIYRDLKPENILLDEEGHIK 170
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FGL + + I EK F ++ Y+APE+ + S D +S+G++++EM+
Sbjct: 171 LTDFGLSK-EAIDHEKKAYSF-CGTVE----YMAPEVVNRQGHSHSADWWSYGVLMFEML 224
Query: 389 EGVQPFHPKPPEEVVKLMC 407
G PF K +E + L+
Sbjct: 225 TGSLPFQGKDRKETMTLIL 243
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ + I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+++D G +K
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIK 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FGL + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGLAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ +RHP + + + + V+EY
Sbjct: 32 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 91
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ S + + ++ ++YLH K +++ DLK +N++LD G
Sbjct: 92 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGH 149
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + E K + Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 150 IKITDFGLCK------EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 203
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E++ +L+ E R P R+ P+ K L+
Sbjct: 204 MMCGRLPFYNQDHEKLFELILMEEIRFP-----RTLGPEAKSLL 242
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPN 246
L L+V+ G G + WNGT +V +K L K PE AF E +++K RH
Sbjct: 17 LRLEVKLGQGCF-GEVWMGTWNGTTRVAIKTL-KPGTMSPE---AFLQEAQVMKKLRHEK 71
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ-KKGR-LSPSKVLRFALDLARGMNYLHEC 304
+VQ V++ P+ IV EY KG L +L+ + G+ L +++ + +A GM Y+
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLY 360
+H DL+ NIL+ K++ FGL RL ++ + + AK FP+ +
Sbjct: 131 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAK--FPIK-------W 178
Query: 361 VAPEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
APE F D +SFG++L E+ +G P+ EV+ G R P +
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRMPCPPEC 237
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
P L +L+ +CW +P RP F + A L+ + Q
Sbjct: 238 ---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 276
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 109/218 (50%), Gaps = 15/218 (6%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL--QKKGRLSPSKVLRFAL 292
E+ ++ +HPN+VQ+ + +N + IV++Y GDL + QK ++L + +
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 293 DLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVS 352
+ + ++H+ K I+H D+K +NI L G +++ FG+ R+ + E A+
Sbjct: 133 QICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTP 189
Query: 353 HIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKR 412
+ Y++PEI +N+ ++ D ++ G +LYE+ F + +V L G
Sbjct: 190 Y------YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV-LKIISGSF 242
Query: 413 PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
PP+ + Y DL+ L+ + + P RP+ N I+ +
Sbjct: 243 PPVSLH---YSYDLRSLVSQLFKRNPRDRPSVNSILEK 277
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 39/272 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 271 DLASYLQ-KKGRLSPSKV---------------LRFALDLARGMNYLHECKPDPIIHCDL 314
+L++YL+ K+ P KV + ++ +A+GM +L K IH DL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+NILL +KI FGL R Y P+ K P+ ++APE + +
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------WMAPETIFDRVY 218
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKEL 429
D +SFG++L+E+ G P+ P + C + +++A Y P++ +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 274
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW +P RP F+E++ L ++ ++Q
Sbjct: 275 MLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 49/271 (18%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKG 270
KV VK+L +H D + A EL I+ +H N+V +GA T P++++ EY G
Sbjct: 63 KVAVKMLKSTAHADEKE--ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 271 DLASYLQKKGR--LSPS---------------------KVLRFALDLARGMNYLHECKPD 307
DL ++L++K L PS +L F+ +A+GM +L
Sbjct: 121 DLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASK 177
Query: 308 PIIHCDLKPKNILLDNGGQLKISGFGLLR-----LQYISPEKAKIVFPVSHIDPANLYVA 362
IH D+ +N+LL NG KI FGL R YI A++ PV ++A
Sbjct: 178 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVK-------WMA 228
Query: 363 PEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARS 421
PE + + D +S+G++L+E+ G+ P+ P +V + + ++ +
Sbjct: 229 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY----PGILVNSKFYKLVKDGYQMAQPA 284
Query: 422 YPP-DLKELIEECWDPKPVIRPNFNEIIARL 451
+ P ++ +++ CW +P RP F +I + L
Sbjct: 285 FAPKNIYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I + P +V+ + N + +VLEY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEY 123
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 180
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+K++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 181 IKVADFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 280
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 281 RFGNLKNGVNDIKNHKWFATT 301
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 183 YELNPLELQVRKADGITK-GSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVE 240
+E++P +L K G + G + KW G V +K++ + S + E F E ++
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 65
Query: 241 KARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMN 299
H +VQ G T+ P+ I+ EY A G L +YL++ + R ++L D+ M
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 125
Query: 300 YLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHID 355
YL + +H DL +N L+++ G +K+S FGL R +Y S +K FPV
Sbjct: 126 YL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK--FPVR--- 177
Query: 356 PANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPP 414
+ PE+ +F D ++FG++++E+ G P+ E +
Sbjct: 178 ----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---------H 224
Query: 415 LKIKARSYPPDLKE-----LIEECWDPKPVIRPNFNEIIARL 451
+ R Y P L ++ CW K RP F +++ +
Sbjct: 225 IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 266
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+++D G
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGY 180
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+K++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 181 IKVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 280
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 281 RFGNLKNGVNDIKNHKWFATT 301
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 84 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR +A + YLH +I+ DLKP+N+L+D G
Sbjct: 144 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 200
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 201 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 252 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 300
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 301 RFGNLKNGVNDIKNHKWFATT 321
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M G PF P ++ + + R P + DLK+L+
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 269
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 183 YELNPLELQVRKADGITK-GSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVE 240
+E++P +L K G + G + KW G V +K++ + S + E F E ++
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 58
Query: 241 KARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMN 299
H +VQ G T+ P+ I+ EY A G L +YL++ + R ++L D+ M
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 118
Query: 300 YLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHID 355
YL + +H DL +N L+++ G +K+S FGL R +Y S +K FPV
Sbjct: 119 YL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK--FPVR--- 170
Query: 356 PANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPP 414
+ PE+ +F D ++FG++++E+ G P+ E +
Sbjct: 171 ----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---------H 217
Query: 415 LKIKARSYPPDLKE-----LIEECWDPKPVIRPNFNEIIARL 451
+ R Y P L ++ CW K RP F +++ +
Sbjct: 218 IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 259
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+++D G +K
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIK 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 183 YELNPLELQVRKADGITK-GSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVE 240
+E++P +L K G + G + KW G V +K++ + S + E F E ++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 59
Query: 241 KARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMN 299
H +VQ G T+ P+ I+ EY A G L +YL++ + R ++L D+ M
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 300 YLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHID 355
YL + +H DL +N L+++ G +K+S FGL R +Y S +K FPV
Sbjct: 120 YL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK--FPVR--- 171
Query: 356 PANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPP 414
+ PE+ +F D ++FG++++E+ G P+ E +
Sbjct: 172 ----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---------H 218
Query: 415 LKIKARSYPPDLKE-----LIEECWDPKPVIRPNFNEIIARL 451
+ R Y P L ++ CW K RP F +++ +
Sbjct: 219 IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 183 YELNPLELQVRKADGITK-GSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVE 240
+E++P +L K G + G + KW G V +K++ + S + E F E ++
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 74
Query: 241 KARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMN 299
H +VQ G T+ P+ I+ EY A G L +YL++ + R ++L D+ M
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 134
Query: 300 YLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHID 355
YL + +H DL +N L+++ G +K+S FGL R +Y S +K FPV
Sbjct: 135 YL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK--FPVR--- 186
Query: 356 PANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPP 414
+ PE+ +F D ++FG++++E+ G P+ E +
Sbjct: 187 ----WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---------H 233
Query: 415 LKIKARSYPPDLKE-----LIEECWDPKPVIRPNFNEIIARL 451
+ R Y P L ++ CW K RP F +++ +
Sbjct: 234 IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 58 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 117
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR +A + YLH +I+ DLKP+N+L+D G
Sbjct: 118 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 174
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 175 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 225
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 226 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 274
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 275 RFGNLKNGVNDIKNHKWFATT 295
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G +K
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIK 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VADFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+AP I ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEY 266
+GT V + ++ P+ + + E+ I+ H +++++ G + +V+EY
Sbjct: 57 DGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G L YL + + +++L FA + GM YLH IH DL +N+LLDN
Sbjct: 117 VPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRL 172
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI FGL + PE + D + APE K +F + D +SFG+ LYE
Sbjct: 173 VKIGDFGLAK---AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKI-----------KARSYPPDLKELIEECWD 435
++ P + + + +G+ L++ + P ++ L++ CW+
Sbjct: 230 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWE 289
Query: 436 PKPVIRPNFNEIIARLDRI 454
+ RP F +I L +
Sbjct: 290 TEASFRPTFENLIPILKTV 308
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 39/272 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 271 DLASYLQ-KKGRLSPSK---------------VLRFALDLARGMNYLHECKPDPIIHCDL 314
+L++YL+ K+ P K ++ ++ +A+GM +L K IH DL
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 176
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+NILL +KI FGL R Y P+ K P+ ++APE + +
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-------WMAPETIFDRVY 229
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKEL 429
D +SFG++L+E+ G P+ P + C + +++A Y P++ +
Sbjct: 230 TIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 285
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW +P RP F+E++ L ++ ++Q
Sbjct: 286 MLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 317
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ + I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+++D G ++
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQ 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FGL + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGLAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 34/280 (12%)
Query: 183 YELNPLELQVRKADGITK-GSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVE 240
+E++P +L K G + G + KW G V +K++ + S + E F E ++
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMM 74
Query: 241 KARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMN 299
H +VQ G T+ P+ I+ EY A G L +YL++ + R ++L D+ M
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 134
Query: 300 YLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKI--VFPVSHIDPA 357
YL + +H DL +N L+++ G +K+S FGL R E + + FPV
Sbjct: 135 YL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR----- 186
Query: 358 NLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLK 416
+ PE+ +F D ++FG++++E+ G P+ E + +
Sbjct: 187 --WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---------HIA 235
Query: 417 IKARSYPPDLKE-----LIEECWDPKPVIRPNFNEIIARL 451
R Y P L ++ CW K RP F +++ +
Sbjct: 236 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 199 TKGSYQVAK--WNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ 256
T G +V K G KV VKIL+++ + + + E+ ++ RHP++++ ++
Sbjct: 28 TFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST 87
Query: 257 NIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
+ +V+EY + G+L Y+ K GRL + R + G++Y C ++H DLKP
Sbjct: 88 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY---CHRHMVVHRDLKP 144
Query: 317 KNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
+N+LLD KI+ FGL + +++ + + LY PE
Sbjct: 145 ENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPE-------- 196
Query: 373 RSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMC 407
VD +S G+ILY ++ G PF + K +C
Sbjct: 197 --VDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC 229
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 84 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 144 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 200
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 201 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 252 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 300
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 301 RFGNLKNGVNDIKNHKWFATT 321
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M G PF P ++ + + R P + DLK+L+
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 269
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 180
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 181 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 280
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 281 RFGNLKNGVNDIKNHKWFATT 301
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M G PF P ++ + + R P + DLK+L+
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 269
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 180
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 181 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 280
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 281 RFGNLKNGVNDIXNHKWFATT 301
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQ 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 180
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 181 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 280
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 281 RFGNLKNGVNDIKNHKWFATT 301
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQ 182
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 183 VTDFGFAK---------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 234 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 282
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 283 GNLKNGVNDIKNHKWFATT 301
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+++D G ++
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQ 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQ 182
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 183 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 234 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 282
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 283 GNLKNGVNDIKNHKWFATT 301
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 10/181 (5%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLA 273
+K++ KE D E I+ E + E+A HP +V + V+EY GDL
Sbjct: 50 MKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM 109
Query: 274 SYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFG 333
++Q++ +L ++ +++ +NYLHE II+ DLK N+LLD+ G +K++ +G
Sbjct: 110 FHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYG 166
Query: 334 LLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQP 393
+ + + + P F + P Y+APEI + E++ SVD ++ G++++EM+ G P
Sbjct: 167 MCK-EGLRPGDTTSXFCGT---PN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
Query: 394 F 394
F
Sbjct: 221 F 221
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 56 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 115
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 116 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 172
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 173 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M G PF P ++ + + R P + DLK+L+
Sbjct: 224 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 262
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQ 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQ 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
G PF P ++ + + R P + DLK+L+
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 269
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 37/270 (13%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 271 DLASYLQ-KKGRLSPSK-------------VLRFALDLARGMNYLHECKPDPIIHCDLKP 316
+L++YL+ K+ P K ++ ++ +A+GM +L K IH DL
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAA 176
Query: 317 KNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
+NILL +KI FGL R P+ K P+ ++APE + +
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------WMAPETIFDRVYTI 229
Query: 374 SVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP-PDLKELIE 431
D +SFG++L+E+ G P+ P + C + +++A Y P++ + +
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 285
Query: 432 ECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+CW +P RP F+E++ L ++ ++Q
Sbjct: 286 DCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P + + + N + +V+EY
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+++D G +K
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIK 182
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 183 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 234 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 282
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 283 GNLKNGVNDIKNHKWFATT 301
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 23/261 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
A G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGY 179
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + +APEI ++ ++++VD ++ G+++YE
Sbjct: 180 IQVTDFGFAK---------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
M G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTK 279
Query: 447 IIARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 280 RFGNLKNGVNDIKNHKWFATT 300
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P + + + N + +V+EY
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+++D G +K
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIK 182
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 183 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 234 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 282
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 283 GNLKNGVNDIKNHKWFATT 301
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 51 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 110
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR S +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 111 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQ 167
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 168 VTDFGFAK---------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 218
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
G PF P ++ + + R P + DLK+L+
Sbjct: 219 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 255
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 10/181 (5%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLA 273
+K++ KE D E I+ E + E+A HP +V + V+EY GDL
Sbjct: 39 MKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM 98
Query: 274 SYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFG 333
++Q++ +L ++ +++ +NYLHE II+ DLK N+LLD+ G +K++ +G
Sbjct: 99 FHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG 155
Query: 334 LLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQP 393
+ + + + P F + P Y+APEI + E++ SVD ++ G++++EM+ G P
Sbjct: 156 MCK-EGLRPGDTTSXFCGT---PN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
Query: 394 F 394
F
Sbjct: 210 F 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY +G++ LQK + + + +L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 123 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 175
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 176 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ RHP + A + + V+EY
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ + + + ++ + YLH +++ D+K +N++LD G
Sbjct: 87 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGH 143
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + + IS F + P Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 144 IKITDFGLCK-EGISDGATMKTFCGT---PE--YLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E + +L+ E R P R+ P+ K L+
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRFP-----RTLSPEAKSLL 236
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ RHP + A + + V+EY
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ + + + ++ + YLH +++ D+K +N++LD G
Sbjct: 87 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGH 143
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + + IS F + P Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 144 IKITDFGLCK-EGISDGATMKTFCGT---PE--YLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E + +L+ E R P R+ P+ K L+
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRFP-----RTLSPEAKSLL 236
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ RHP + A + + V+EY
Sbjct: 30 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 89
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ + + + ++ + YLH +++ D+K +N++LD G
Sbjct: 90 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGH 146
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + + IS F + P Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 147 IKITDFGLCK-EGISDGATMKTFCGT---PE--YLAPEVLEDNDYGRAVDWWGLGVVMYE 200
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E + +L+ E R P R+ P+ K L+
Sbjct: 201 MMCGRLPFYNQDHERLFELILMEEIRFP-----RTLSPEAKSLL 239
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 10/181 (5%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLA 273
++++ KE D E I+ E + E+A HP +V + V+EY GDL
Sbjct: 82 MRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM 141
Query: 274 SYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFG 333
++Q++ +L ++ +++ +NYLHE II+ DLK N+LLD+ G +K++ +G
Sbjct: 142 FHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYG 198
Query: 334 LLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQP 393
+ + + + P F + P Y+APEI + E++ SVD ++ G++++EM+ G P
Sbjct: 199 MCK-EGLRPGDTTSTFCGT---PN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
Query: 394 F 394
F
Sbjct: 253 F 253
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 39/272 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 271 DLASYLQ-KKGRLSPSKV---------------LRFALDLARGMNYLHECKPDPIIHCDL 314
+L++YL+ K+ P KV + ++ +A+GM +L K IH DL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+NILL +KI FGL R P+ K P+ ++APE + +
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------WMAPETIFDRVY 218
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP-PDLKEL 429
D +SFG++L+E+ G P+ P + C + +++A Y P++ +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 274
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW +P RP F+E++ L ++ ++Q
Sbjct: 275 MLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 10/181 (5%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLA 273
+K++ KE D E I+ E + E+A HP +V + V+EY GDL
Sbjct: 35 MKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM 94
Query: 274 SYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFG 333
++Q++ +L ++ +++ +NYLHE II+ DLK N+LLD+ G +K++ +G
Sbjct: 95 FHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG 151
Query: 334 LLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQP 393
+ + + + P F + P Y+APEI + E++ SVD ++ G++++EM+ G P
Sbjct: 152 MCK-EGLRPGDTTSXFCGT---PN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
Query: 394 F 394
F
Sbjct: 206 F 206
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR +A + YLH +I+ DLKP+N+++D G +K
Sbjct: 125 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIK 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ RHP + A + + V+EY
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ + + + ++ + YLH +++ D+K +N++LD G
Sbjct: 87 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGH 143
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + + IS F + P Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 144 IKITDFGLCK-EGISDGATMKXFCGT---PE--YLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E + +L+ E R P R+ P+ K L+
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRFP-----RTLSPEAKSLL 236
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+K+L K + K +R+ E I+ + HP +V+ A + ++L++ GDL +
Sbjct: 57 MKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 115
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
L K+ + V + +LA +++LH II+ DLKP+NILLD G +K++ FGL
Sbjct: 116 RLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL 172
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + I EK F ++ Y+APE+ +S D +SFG++++EM+ G PF
Sbjct: 173 SK-ESIDHEKKAYSF-CGTVE----YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 395 HPKPPEEVVKLMC 407
K +E + ++
Sbjct: 227 QGKDRKETMTMIL 239
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+K+L K + K +R+ E I+ + HP +V+ A + ++L++ GDL +
Sbjct: 58 MKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 116
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
L K+ + V + +LA +++LH II+ DLKP+NILLD G +K++ FGL
Sbjct: 117 RLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGL 173
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + I EK F ++ Y+APE+ +S D +SFG++++EM+ G PF
Sbjct: 174 SK-ESIDHEKKAYSF-CGTVE----YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
Query: 395 HPKPPEEVVKLMC 407
K +E + ++
Sbjct: 228 QGKDRKETMTMIL 240
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V +KI+DK + +P + E+ I++ HPN+V+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDK-TQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +++EY + G++ YL GR+ + + + Y H+ + I+H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHR 138
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG + + + A Y APE+++ +++D
Sbjct: 139 DLKAENLLLDADMNIKIADFGF-------SNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIE 431
VD +S G+ILY ++ G PF + +E+ + + R P + D + L++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST-----DCENLLK 246
Query: 432 ECWDPKPVIRPNFNEII 448
P+ R +I+
Sbjct: 247 RFLVLNPIKRGTLEQIM 263
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+K+L K + K +R+ E I+ + HP +V+ A + ++L++ GDL +
Sbjct: 57 MKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 115
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
L K+ + V + +LA +++LH II+ DLKP+NILLD G +K++ FGL
Sbjct: 116 RLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGL 172
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + I EK F ++ Y+APE+ +S D +SFG++++EM+ G PF
Sbjct: 173 SK-ESIDHEKKAYSF-CGTVE----YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 395 HPKPPEEVVKLMC 407
K +E + ++
Sbjct: 227 QGKDRKETMTMIL 239
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ RHP + A + + V+EY
Sbjct: 32 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 91
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ + + + ++ + YLH +++ D+K +N++LD G
Sbjct: 92 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGH 148
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + + IS F + P Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 149 IKITDFGLCK-EGISDGATMKXFCGT---PE--YLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E + +L+ E R P R+ P+ K L+
Sbjct: 203 MMCGRLPFYNQDHERLFELILMEEIRFP-----RTLSPEAKSLL 241
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 39/272 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 271 DLASYLQ-KKGRLSPSKV---------------LRFALDLARGMNYLHECKPDPIIHCDL 314
+L++YL+ K+ P KV + ++ +A+GM +L K IH DL
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+NILL +KI FGL R P+ K P+ ++APE + +
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------WMAPETIFDRVY 227
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP-PDLKEL 429
D +SFG++L+E+ G P+ P + C + +++A Y P++ +
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 283
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW +P RP F+E++ L ++ ++Q
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY +G++ LQK + + + +L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + ++ +
Sbjct: 123 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLXGTL 175
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 176 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ RHP + A + + V+EY
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ + + + ++ + YLH +++ D+K +N++LD G
Sbjct: 87 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGH 143
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + + IS F + P Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 144 IKITDFGLCK-EGISDGATMKXFCGT---PE--YLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E + +L+ E R P R+ P+ K L+
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRFP-----RTLSPEAKSLL 236
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KIL KE + + E +++ RHP + A + + V+EY
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L +L ++ + + + ++ + YLH +++ D+K +N++LD G
Sbjct: 87 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGH 143
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI+ FGL + + IS F + P Y+APE+ ++ ++ R+VD + G+++YE
Sbjct: 144 IKITDFGLCK-EGISDGATMKXFCGT---PE--YLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M+ G PF+ + E + +L+ E R P R+ P+ K L+
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRFP-----RTLSPEAKSLL 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 39/272 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 271 DLASYLQ-KKGRLSPSKV---------------LRFALDLARGMNYLHECKPDPIIHCDL 314
+L++YL+ K+ P KV + ++ +A+GM +L K IH DL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEF 371
+NILL +KI FGL R P+ K P+ ++APE + +
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------WMAPETIFDRVY 218
Query: 372 DRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP-PDLKEL 429
D +SFG++L+E+ G P+ P + C + +++A Y P++ +
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 274
Query: 430 IEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+ +CW +P RP F+E++ L ++ ++Q
Sbjct: 275 MLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 32/290 (11%)
Query: 177 PREVPEYELNPLELQVRKADGITK-GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTH 234
P E +E+ L++ K G + G +A +N TKV VK + S + AF
Sbjct: 171 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLA 226
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSP-SKVLRFAL 292
E +++ +H +V+ VT+ P+ I+ E+ AKG L +L+ +G P K++ F+
Sbjct: 227 EANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 285
Query: 293 DLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVS 352
+A GM ++ + IH DL+ NIL+ KI+ FGL R+ AK FP+
Sbjct: 286 QIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV------GAK--FPIK 334
Query: 353 HIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGK 411
+ APE F D +SFG++L E++ G P+ EV++ + G
Sbjct: 335 -------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGY 386
Query: 412 RPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
R P + + P +L ++ CW +P RP F I + LD Q
Sbjct: 387 RMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQ 433
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 56 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 115
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G++ S+L++ GR +A + YLH +I+ DLKP+N+L+D G
Sbjct: 116 VPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGY 172
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
++++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YE
Sbjct: 173 IQVTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
M G PF P ++ + + R P + DLK+L+
Sbjct: 224 MAAGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL 262
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 38/280 (13%)
Query: 185 LNPLELQVRKADGITK-GSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKA 242
++P +L K G + G + KW G V +K++ + S + E F E ++
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNL 56
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYL 301
H +VQ G T+ P+ I+ EY A G L +YL++ + R ++L D+ M YL
Sbjct: 57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 116
Query: 302 HECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPA 357
+ +H DL +N L+++ G +K+S FGL R +Y S +K FPV
Sbjct: 117 ---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK--FPVR----- 166
Query: 358 NLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLK 416
+ PE+ +F D ++FG++++E+ G P+ E + +
Sbjct: 167 --WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---------HIA 215
Query: 417 IKARSYPPDLKE-----LIEECWDPKPVIRPNFNEIIARL 451
R Y P L ++ CW K RP F +++ +
Sbjct: 216 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 255
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 38/271 (14%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 61 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 271 DLASYLQ-KKGRLSPSK--------------VLRFALDLARGMNYLHECKPDPIIHCDLK 315
+L++YL+ K+ P K ++ ++ +A+GM +L K IH DL
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLA 175
Query: 316 PKNILLDNGGQLKISGFGLLRLQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
+NILL +KI FGL R P+ K P+ ++APE + +
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-------WMAPETIFDRVYT 228
Query: 373 RSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP-PDLKELI 430
D +SFG++L+E+ G P+ P + C + +++A Y P++ + +
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPY----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 284
Query: 431 EECWDPKPVIRPNFNEIIARLDRIVCNCSKQ 461
+CW +P RP F+E++ L ++ ++Q
Sbjct: 285 LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 125 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQ 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 125 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQ 181
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 182 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 281
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 282 GNLKNGVNDIKNHKWFATT 300
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P +V+ + N + +V+EY
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR +A + YLH +I+ DLKP+N+L+D G ++
Sbjct: 126 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQ 182
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 183 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 234 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 282
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 283 GNLKNGVNDIKNHKWFATT 301
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEY 266
+GT V + ++ P+ + + E+ I+ H +++++ G + +V+EY
Sbjct: 40 DGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G L YL + + +++L FA + GM YLH IH +L +N+LLDN
Sbjct: 100 VPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRL 155
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI FGL + PE + D + APE K +F + D +SFG+ LYE
Sbjct: 156 VKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 212
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKI-----------KARSYPPDLKELIEECWD 435
++ P + + + +G+ L++ + P ++ L++ CW+
Sbjct: 213 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWE 272
Query: 436 PKPVIRPNFNEIIARLDRI 454
+ RP F +I L +
Sbjct: 273 TEASFRPTFENLIPILKTV 291
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L+K GR+ + +
Sbjct: 52 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 111
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + +G+ YL E I+H D+KP NIL+++ G++K+ FG + Q I + V
Sbjct: 112 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDEMANEFVG 168
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCE 409
S Y++PE + + D +S GL L EM G +P+PP + +L+
Sbjct: 169 TRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR---YPRPPMAIFELLDYI 218
Query: 410 GKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
PP K+ + + + ++ + +C P R + +++
Sbjct: 219 VNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVH 259
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V +KI+DK + +P + E+ I++ HPN+V+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDK-TQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +++EY + G++ YL GR+ + + + Y H+ + I+H
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHR 135
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG + + + + Y APE+++ +++D
Sbjct: 136 DLKAENLLLDADMNIKIADFGF-------SNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIE 431
VD +S G+ILY ++ G PF + +E+ + + R P + D + L++
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST-----DCENLLK 243
Query: 432 ECWDPKPVIRPNFNEII 448
P+ R +I+
Sbjct: 244 RFLVLNPIKRGTLEQIM 260
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 23/259 (8%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G +KILDK+ ++I +E I++ P + + + N + +V+EY
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G++ S+L++ GR +A + YLH +I+ DLKP+N+++D G +K
Sbjct: 126 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIK 182
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
++ FG + ++ + Y+APEI ++ ++++VD ++ G+++YEM
Sbjct: 183 VTDFGFAK---------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF P ++ + + R P + DLK+L+ + +++ + +
Sbjct: 234 AGYPPFFADQPIQIYEKIVSGKVRFP-----SHFSSDLKDLL------RNLLQVDLTKRF 282
Query: 449 ARLDRIVCNCSKQGWWKDT 467
L V + W+ T
Sbjct: 283 GNLKNGVNDIKNHKWFATT 301
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEY 266
+GT V + ++ P+ + + E+ I+ H +++++ G + +V+EY
Sbjct: 40 DGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G L YL + + +++L FA + GM YLH IH +L +N+LLDN
Sbjct: 100 VPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRL 155
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI FGL + PE + D + APE K +F + D +SFG+ LYE
Sbjct: 156 VKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 212
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKI-----------KARSYPPDLKELIEECWD 435
++ P + + + +G+ L++ + P ++ L++ CW+
Sbjct: 213 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWE 272
Query: 436 PKPVIRPNFNEIIARLDRI 454
+ RP F +I L +
Sbjct: 273 TEASFRPTFENLIPILKTV 291
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + S +A + +
Sbjct: 121 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRAALCGTLD-- 174
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 175 -----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + + ++LEY G + LQK + + + +L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y H K +IH D+KP+N+LL + G+LKI+ FG + S +A + +
Sbjct: 118 ANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRAALCGTLD-- 171
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
Y+ PE+ + D VD +S G++ YE + G PF ++ K +
Sbjct: 172 -----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP 226
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 130/307 (42%), Gaps = 58/307 (18%)
Query: 191 QVRKADGITKGSYQV---AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ + + KG Y W G V VKI K R EL RH N+
Sbjct: 38 QITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR----ETELYNTVMLRHENI 93
Query: 248 VQFVGAVT----QNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH- 302
+ F+ + + + ++ YH G L YLQ L LR L +A G+ +LH
Sbjct: 94 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHI 152
Query: 303 -----ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPA 357
+ KP I H DLK KNIL+ GQ I+ GL + S + +D
Sbjct: 153 EIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ---------LDVG 202
Query: 358 N-------LYVAPEIYKN----EEFD--RSVDAYSFGLILYE---------MIEGVQ-PF 394
N Y+APE+ + FD + VD ++FGL+L+E ++E + PF
Sbjct: 203 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 262
Query: 395 HPKPP-----EEVVKLMCCEGKRPPLKIKARSYP--PDLKELIEECWDPKPVIRPNFNEI 447
+ P E++ K++C + +RP + + S P L +L++ECW P R I
Sbjct: 263 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 322
Query: 448 IARLDRI 454
L +I
Sbjct: 323 KKTLTKI 329
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + S +A + +
Sbjct: 118 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRAALCGTLD-- 171
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 172 -----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 15/211 (7%)
Query: 198 ITKGSYQ---VAKWNGTKVW--VKILDKES-HKDPERINAFTHELTIVEKARHPNVVQFV 251
I KGS+ +A+ +V+ VK+L K++ K E + + +++ +HP +V
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ + VL+Y G+L +LQ++ + +A ++A + YLH I++
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN---IVY 162
Query: 312 CDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEF 371
DLKP+NILLD+ G + ++ FGL + E + S Y+APE+ + +
Sbjct: 163 RDLKPENILLDSQGHIVLTDFGLCK------ENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 372 DRSVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
DR+VD + G +LYEM+ G+ PF+ + E+
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 120 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIANFG---WSVHAPSSRRTTL-CGTL 172
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 173 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V VKI+DK + +P + E+ I++ HPN+V+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDK-TQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +V+EY + G++ YL GR+ + + + Y C I+H
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY---CHQKYIVHR 138
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG + + + + Y APE+++ +++D
Sbjct: 139 DLKAENLLLDGDMNIKIADFGF-------SNEFTVGNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
VD +S G+ILY ++ G PF + +E+
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 123 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 175
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE + D VD +S G++ YE + G PF +E K +
Sbjct: 176 D----YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 131/307 (42%), Gaps = 58/307 (18%)
Query: 191 QVRKADGITKGSY---QVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q+ + + KG Y W G V VKI K R + + + RH N+
Sbjct: 9 QITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVML----RHENI 64
Query: 248 VQFVGAVT----QNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH- 302
+ F+ + + + ++ YH G L YLQ L LR L +A G+ +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHI 123
Query: 303 -----ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPA 357
+ KP I H DLK KNIL+ GQ I+ GL + S + +D
Sbjct: 124 EIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ---------LDVG 173
Query: 358 N-------LYVAPEIYKN----EEFD--RSVDAYSFGLILYE---------MIEGVQ-PF 394
N Y+APE+ + FD + VD ++FGL+L+E ++E + PF
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233
Query: 395 HPKPP-----EEVVKLMCCEGKRPPLKIKARSYP--PDLKELIEECWDPKPVIRPNFNEI 447
+ P E++ K++C + +RP + + S P L +L++ECW P R I
Sbjct: 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
Query: 448 IARLDRI 454
L +I
Sbjct: 294 KKTLTKI 300
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + + +
Sbjct: 119 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSCHAPSSRRTTLSGT-L 171
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 172 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 121 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIANFG---WSVHAPSSRRTTL-CGTL 173
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 174 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 134
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 135 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 187
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 188 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 243
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 244 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 123 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 175
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 176 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 118 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 170
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 171 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 121 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 173
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 174 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 121 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 173
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 174 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y H + +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 144 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 196
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 197 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 252
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 253 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + S + ++ +
Sbjct: 118 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTELCGTLD-- 171
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 172 -----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 116
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 117 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 169
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 170 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 225
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 226 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + ++ +
Sbjct: 118 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTXLCGTL 170
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 171 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 17/228 (7%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L+K GR+ + +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + +G+ YL E I+H D+KP NIL+++ G++K+ FG + Q I V
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFVG 165
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHP-------KPPEEV 402
S Y++PE + + D +S GL L EM G P P +PP +
Sbjct: 166 TRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAI 218
Query: 403 VKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
+L+ PP K+ + + + ++ + +C P R + +++
Sbjct: 219 FELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 266
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 121
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 122 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 174
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 175 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 230
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 231 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK R + + +L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 122 ANALSY---CHSKRVIHRDIKPENLLLGSNGELKIADFG---WSVHAPSSRRTTL-CGTL 174
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
D Y+ PE+ + D VD +S G++ YE + G+ PF +E +
Sbjct: 175 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 114
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG +P + +
Sbjct: 115 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTL-CGTL 167
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 168 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 223
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 224 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + S + + +
Sbjct: 123 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTDLCGTLD-- 176
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 177 -----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + S + + +
Sbjct: 118 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTDLCGTLD-- 171
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 172 -----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + P S
Sbjct: 119 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPSSRR 164
Query: 355 DP--ANL-YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM----- 406
D L Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 165 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 224
Query: 407 -----CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + S + + +
Sbjct: 119 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTDLCGTLD-- 172
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 173 -----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + ++ +
Sbjct: 120 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTL 172
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 173 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 36/287 (12%)
Query: 187 PLELQVRKADGITKGSY-QV--AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243
P E Q+ + I KG + QV +W+G +V ++++D E + +++ AF E+ + R
Sbjct: 31 PFE-QLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIE-RDNEDQLKAFKREVMAYRQTR 87
Query: 244 HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR--LSPSKVLRFALDLARGMNYL 301
H NVV F+GA + P + ++ KG + + + L +K + A ++ +GM YL
Sbjct: 88 HENVVLFMGACM-SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 302 HECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYI-----SPEKAKIVFPVSHIDP 356
H I+H DLK KN+ DN G++ I+ FGL + + +K +I +
Sbjct: 147 H---AKGILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQ------NG 196
Query: 357 ANLYVAPEIYK-----NEE----FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMC 407
++APEI + EE F + D ++ G I YE+ PF +P E ++ M
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG 256
Query: 408 CEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
G +P L ++ +++ CW + RP F +++ L+++
Sbjct: 257 T-GMKPNL--SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 22/269 (8%)
Query: 185 LNPLELQVRKADGITKGSY-QVAKW--NGTK--VWVKILDKESHKDPERINAFTHELTIV 239
L+P EL K + I KGS+ +V K N T+ V +KI+D E + + I E+T++
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVL 59
Query: 240 EKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMN 299
+ P V ++ G+ ++ + I++EY G L+ G L +++ ++ +G++
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLD 118
Query: 300 YLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL 359
YLH K IH D+K N+LL G++K++ FG+ Q + + F +
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNTFVGT-----PF 169
Query: 360 YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
++APE+ K +D D +S G+ E+ G P P +V L PP
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFLIPKNNPP--TLE 225
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEII 448
+Y LKE +E C + +P RP E++
Sbjct: 226 GNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK------------ 279
F E ++ +H ++V+F G T+ P+++V EY GDL +L+
Sbjct: 90 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149
Query: 280 ---GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLR 336
G L ++L A +A GM YL +H DL +N L+ G +KI FG+ R
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSR 206
Query: 337 LQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQ 392
Y + + + P+ ++ PE +F D +SFG++L+E+ G Q
Sbjct: 207 DIYSTDYYRVGGRTMLPIR-------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259
Query: 393 PFHPKPPEEVVKLMCC--EGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
P++ E + + E +RP R+ PP++ ++ CW +P R + ++ AR
Sbjct: 260 PWYQLSNTEAIDCITQGRELERP------RACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313
Query: 451 LDRIV 455
L +
Sbjct: 314 LQALA 318
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 125/294 (42%), Gaps = 55/294 (18%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT----Q 256
G W G V VKI K R + + + RH N++ F+ +
Sbjct: 22 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIASDMTSRHS 77
Query: 257 NIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH------ECKPDPII 310
+ + ++ YH G L YLQ L LR L +A G+ +LH + KP I
Sbjct: 78 STQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIA 135
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPAN-------LYVAP 363
H DLK KNIL+ GQ I+ GL + S + +D N Y+AP
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQS---------TNQLDVGNNPRVGTKRYMAP 186
Query: 364 EIYKN----EEFD--RSVDAYSFGLILYE---------MIEGVQ-PFHPKPP-----EEV 402
E+ + FD + VD ++FGL+L+E ++E + PF+ P E++
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 246
Query: 403 VKLMCCEGKRPPLKIKARSYP--PDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
K++C + +RP + + S P L +L++ECW P R I L +I
Sbjct: 247 RKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + ++ +
Sbjct: 121 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTL 173
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 174 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + S + + +
Sbjct: 118 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFG-WSVHAPSSRRTDLCGTLD-- 171
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 172 -----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + ++ +
Sbjct: 118 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTL 170
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM-------- 406
D Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 171 D----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 407 --CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 37/244 (15%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK------------ 279
F E ++ +H ++V+F G T+ P+++V EY GDL +L+
Sbjct: 61 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 120
Query: 280 ---GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLR 336
G L ++L A +A GM YL +H DL +N L+ G +KI FG+ R
Sbjct: 121 VAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSR 177
Query: 337 LQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQ 392
Y + + + P+ ++ PE +F D +SFG++L+E+ G Q
Sbjct: 178 DIYSTDYYRVGGRTMLPIR-------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
Query: 393 PFHPKPPEEVVKLMCC--EGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
P++ E + + E +RP R+ PP++ ++ CW +P R + ++ AR
Sbjct: 231 PWYQLSNTEAIDCITQGRELERP------RACPPEVYAIMRGCWQREPQQRHSIKDVHAR 284
Query: 451 LDRI 454
L +
Sbjct: 285 LQAL 288
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 37/244 (15%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKK------------ 279
F E ++ +H ++V+F G T+ P+++V EY GDL +L+
Sbjct: 67 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 126
Query: 280 ---GRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLR 336
G L ++L A +A GM YL +H DL +N L+ G +KI FG+ R
Sbjct: 127 VAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSR 183
Query: 337 LQYISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQ 392
Y + + + P+ ++ PE +F D +SFG++L+E+ G Q
Sbjct: 184 DIYSTDYYRVGGRTMLPIR-------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
Query: 393 PFHPKPPEEVVKLMCC--EGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
P++ E + + E +RP R+ PP++ ++ CW +P R + ++ AR
Sbjct: 237 PWYQLSNTEAIDCITQGRELERP------RACPPEVYAIMRGCWQREPQQRHSIKDVHAR 290
Query: 451 LDRI 454
L +
Sbjct: 291 LQAL 294
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 22/269 (8%)
Query: 185 LNPLELQVRKADGITKGSY-QVAKW--NGTK--VWVKILDKESHKDPERINAFTHELTIV 239
L+P EL K + I KGS+ +V K N T+ V +KI+D E + + I E+T++
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVL 59
Query: 240 EKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMN 299
+ P V ++ G+ ++ + I++EY G L+ G L +++ ++ +G++
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLD 118
Query: 300 YLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL 359
YLH K IH D+K N+LL G++K++ FG ++ + +
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFG------VAGQLTDTQIKRNXFVGTPF 169
Query: 360 YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
++APE+ K +D D +S G+ E+ G P P +V L PP
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFLIPKNNPP--TLE 225
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEII 448
+Y LKE +E C + +P RP E++
Sbjct: 226 GNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK R + + +L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + P S
Sbjct: 122 ANALSY---CHSKRVIHRDIKPENLLLGSNGELKIADFGW-----------SVHAPSSRR 167
Query: 355 DP--ANL-YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
D L Y+ PE+ + D VD +S G++ YE + G+ PF +E +
Sbjct: 168 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ--NIPMMIVLEYHAKG 270
VW K LD S + E+ E+ ++ + +HPN+V++ + N + IV+EY G
Sbjct: 35 VW-KELDYGSMTEAEK-QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGG 92
Query: 271 DLASYLQKKGR----LSPSKVLRFALDLARGMNYLHECKPD---PIIHCDLKPKNILLDN 323
DLAS + K + L VLR L + H + D ++H DLKP N+ LD
Sbjct: 93 DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDG 151
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
+K+ FGL R+ AK + Y++PE ++ D +S G +
Sbjct: 152 KQNVKLGDFGLARILNHDTSFAKTFVGTPY------YMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 384 LYEMIEGVQPFHPKPPEEVV-KLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRP 442
LYE+ + PF +E+ K+ + +R P + Y +L E+I + K RP
Sbjct: 206 LYELCALMPPFTAFSQKELAGKIREGKFRRIPYR-----YSDELNEIITRMLNLKDYHRP 260
Query: 443 NFNEII 448
+ EI+
Sbjct: 261 SVEEIL 266
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 14/215 (6%)
Query: 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALD 293
E+T++ + P V ++ G+ ++ + I++EY G L+ G L +++ +
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILRE 127
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
+ +G++YLH K IH D+K N+LL G++K++ FG ++ + +
Sbjct: 128 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFG------VAGQLTDTQIKRNX 178
Query: 354 IDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRP 413
++APE+ K +D D +S G+ E+ G P P +V L P
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFLIPKNNP 236
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
P S P LKE +E C + +P RP E++
Sbjct: 237 PTLEGNYSKP--LKEFVEACLNKEPSFRPTAKELL 269
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y H + +IH D+KP+N+LL + G+LKI+ FG + P S
Sbjct: 144 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPSSRR 189
Query: 355 DP--ANL-YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM----- 406
D L Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 190 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 249
Query: 407 -----CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 18/231 (7%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
VK+++K S K+ + + E+ +++K HPN+++ + + IV E + G+L
Sbjct: 52 VKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISG 331
+ K+ R S R + G+ Y+H+ I+H DLKP+NILL++ + +KI
Sbjct: 111 EIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 332 FGLLR-LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
FGL Q + K +I Y+APE+ + +D D +S G+ILY ++ G
Sbjct: 168 FGLSTCFQQNTKMKDRI--------GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
Query: 391 VQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIR 441
PF+ K +++K + GK + R+ D K+LI + P +R
Sbjct: 219 TPPFYGKNEYDILKRVET-GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 17/192 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
+ G KV VKIL+++ + + + E+ ++ RHP++++ ++ +V+EY
Sbjct: 33 QLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
+ G+L Y+ K GR+ + R + ++Y C ++H DLKP+N+LLD
Sbjct: 93 VSGGELFDYICKHGRVEEMEARRLFQQILSAVDY---CHRHMVVHRDLKPENVLLDAHMN 149
Query: 327 LKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGL 382
KI+ FGL + +++ + + LY PE VD +S G+
Sbjct: 150 AKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPE----------VDIWSCGV 199
Query: 383 ILYEMIEGVQPF 394
ILY ++ G PF
Sbjct: 200 ILYALLCGTLPF 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 126/264 (47%), Gaps = 28/264 (10%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEY 266
G +V VK L ES + I E+ I+ H N+V++ G T++ + +++E+
Sbjct: 49 TGEQVAVKSLKPESGGN--HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106
Query: 267 HAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
G L YL K K +++ + L++A+ + +GM+YL + +H DL +N+L+++
Sbjct: 107 LPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEH 163
Query: 326 QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILY 385
Q+KI FGL + I +K P Y APE +F + D +SFG+ L+
Sbjct: 164 QVKIGDFGLTKA--IETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLH 220
Query: 386 EM--------------IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIE 431
E+ ++ + P H + + EGKR P + P ++ +L+
Sbjct: 221 ELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC---PPNCPDEVYQLMR 277
Query: 432 ECWDPKPVIRPNFNEIIARLDRIV 455
+CW+ +P R +F +I + ++
Sbjct: 278 KCWEFQPSNRTSFQNLIEGFEALL 301
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ--NIPMMIVLEYHAKG 270
VW K LD S + E+ E+ ++ + +HPN+V++ + N + IV+EY G
Sbjct: 35 VW-KELDYGSMTEAEK-QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGG 92
Query: 271 DLASYLQKKGR----LSPSKVLRFALDLARGMNYLHECKPD---PIIHCDLKPKNILLDN 323
DLAS + K + L VLR L + H + D ++H DLKP N+ LD
Sbjct: 93 DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDG 151
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
+K+ FGL R+ AK + Y++PE ++ D +S G +
Sbjct: 152 KQNVKLGDFGLARILNHDTSFAKAFVGTPY------YMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 384 LYEMIEGVQPFHPKPPEEVV-KLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRP 442
LYE+ + PF +E+ K+ + +R P + Y +L E+I + K RP
Sbjct: 206 LYELCALMPPFTAFSQKELAGKIREGKFRRIPYR-----YSDELNEIITRMLNLKDYHRP 260
Query: 443 NFNEII 448
+ EI+
Sbjct: 261 SVEEIL 266
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 28/264 (10%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEY 266
G +V VK L ES + I E+ I+ H N+V++ G T++ + +++E+
Sbjct: 37 TGEQVAVKSLKPESGGN--HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 94
Query: 267 HAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
G L YL K K +++ + L++A+ + +GM+YL + +H DL +N+L+++
Sbjct: 95 LPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEH 151
Query: 326 QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILY 385
Q+KI FGL + I +K P Y APE +F + D +SFG+ L+
Sbjct: 152 QVKIGDFGLTKA--IETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLH 208
Query: 386 EM--------------IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIE 431
E+ ++ + P H + + EGKR P P ++ +L+
Sbjct: 209 ELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNC---PDEVYQLMR 265
Query: 432 ECWDPKPVIRPNFNEIIARLDRIV 455
+CW+ +P R +F +I + ++
Sbjct: 266 KCWEFQPSNRTSFQNLIEGFEALL 289
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 24/241 (9%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K N + +K+L K + + E+ I RHPN+++ + ++LE+
Sbjct: 36 KQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF 95
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
+G+L LQK GR + F +LA ++Y HE K +IH D+KP+N+L+ G+
Sbjct: 96 APRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGE 152
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
LKI+ FG + S + + + Y+ PE+ + + D VD + G++ YE
Sbjct: 153 LKIADFG-WSVHAPSLRRRXMCGTLD-------YLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 387 MIEGVQPF-HPKPPEEVVKLMCCEGKRPPLKIKA---------RSYPPD---LKELIEEC 433
+ G+ PF P E +++ + K PP R +PP LK ++E
Sbjct: 205 FLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
Query: 434 W 434
W
Sbjct: 265 W 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ + ++LE+ +G+L LQK GR + F +L
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 124
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y HE K +IH D+KP+N+L+ G+LKI+ FG + S + + +
Sbjct: 125 ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFG-WSVHAPSLRRRXMCGTLD-- 178
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF-HPKPPEEVVKLMCCEGKRP 413
Y+ PE+ + + D VD + G++ YE + G+ PF P E +++ + K P
Sbjct: 179 -----YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP 233
Query: 414 PLKIKA---------RSYPPD---LKELIEECW 434
P R +PP LK ++E W
Sbjct: 234 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 266
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I RHPN+++ G + ++LEY G + LQK + + + +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
A ++Y C +IH D+KP+N+LL + G+LKI+ FG + P S
Sbjct: 121 ANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPSSRR 166
Query: 355 DP--ANL-YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM----- 406
D L Y+ PE+ + D VD +S G++ YE + G PF +E K +
Sbjct: 167 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 226
Query: 407 -----CCEGKRPPLKIKARSYP---PDLKELIEECW 434
EG R + + P P L+E++E W
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 24/241 (9%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K N + +K+L K + + E+ I RHPN+++ + ++LE+
Sbjct: 36 KQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF 95
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
+G+L LQK GR + F +LA ++Y HE K +IH D+KP+N+L+ G+
Sbjct: 96 APRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGE 152
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
LKI+ FG + S + + + Y+ PE+ + + D VD + G++ YE
Sbjct: 153 LKIADFG-WSVHAPSLRRRXMCGTLD-------YLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 387 MIEGVQPF-HPKPPEEVVKLMCCEGKRPPLKIKA---------RSYPPD---LKELIEEC 433
+ G+ PF P E +++ + K PP R +PP LK ++E
Sbjct: 205 FLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
Query: 434 W 434
W
Sbjct: 265 W 265
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 14/215 (6%)
Query: 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALD 293
E+T++ + P V ++ G+ ++ + I++EY G L+ G L +++ +
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILRE 132
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
+ +G++YLH K IH D+K N+LL G++K++ FG+ Q + + F +
Sbjct: 133 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNTFVGT- 187
Query: 354 IDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRP 413
++APE+ K +D D +S G+ E+ G P P +V L P
Sbjct: 188 ----PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFLIPKNNP 241
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
P +Y LKE +E C + +P RP E++
Sbjct: 242 P--TLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 227 ERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK 286
E + F E+ + H N+V + ++ +V+EY L+ Y++ G LS
Sbjct: 53 ETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDT 112
Query: 287 VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLR-LQYISPEKA 345
+ F + G+ + H+ + I+H D+KP+NIL+D+ LKI FG+ + L S
Sbjct: 113 AINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS---- 165
Query: 346 KIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
+ +H+ Y +PE K E D D YS G++LYEM+ G PF+
Sbjct: 166 --LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Query: 235 ELTIVEK------ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVL 288
E T+VEK + P + Q + V+EY GDL ++Q+ GR +
Sbjct: 386 ECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV 445
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+A ++A G+ +L + II+ DLK N++LD+ G +KI+ FG+ + K
Sbjct: 446 FYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF 502
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
Y+APEI + + +SVD ++FG++LYEM+ G PF + +E+ +
Sbjct: 503 CGTPD------YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 552
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 17/192 (8%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
+ G KV VKIL+++ + + + E+ ++ RHP++++ ++ +V+EY
Sbjct: 33 QLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
+ G+L Y+ K GR+ + R + ++Y C ++H DLKP+N+LLD
Sbjct: 93 VSGGELFDYICKHGRVEEMEARRLFQQILSAVDY---CHRHMVVHRDLKPENVLLDAHMN 149
Query: 327 LKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGL 382
KI+ FGL + +++ + + LY PE VD +S G+
Sbjct: 150 AKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPE----------VDIWSCGV 199
Query: 383 ILYEMIEGVQPF 394
ILY ++ G PF
Sbjct: 200 ILYALLCGTLPF 211
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 31/240 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKG----------- 280
F E ++ +H ++V+F G + P+++V EY GDL +L+ G
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP 121
Query: 281 --RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ 338
L+ S++L A +A GM YL +H DL +N L+ +KI FG+ R
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV 178
Query: 339 YISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPF 394
Y + + P+ ++ PE +F D +S G++L+E+ G QP+
Sbjct: 179 YSTDYYRVGGHTMLPIR-------WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231
Query: 395 HPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ EV++ C + L+ + R+ P ++ EL+ CW +P +R N I L +
Sbjct: 232 YQLSNNEVIE---CITQGRVLQ-RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V VKI+DK + + + E+ I++ HPN+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +V+EY + G++ YL GR+ + + + Y C I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY---CHQKFIVHR 137
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG ++ K + A Y APE+++ +++D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN-EFTFGNK------LDAFCGAPPYAAPELFQGKKYD 190
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
VD +S G+ILY ++ G PF + +E+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 24/246 (9%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ--NIPMMIVLEYHAKG 270
VW K LD S + E+ E+ ++ + +HPN+V++ + N + IV+EY G
Sbjct: 35 VW-KELDYGSMTEAEK-QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGG 92
Query: 271 DLASYLQKKGR----LSPSKVLRFALDLARGMNYLHECKPD---PIIHCDLKPKNILLDN 323
DLAS + K + L VLR L + H + D ++H DLKP N+ LD
Sbjct: 93 DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDG 151
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
+K+ FGL R+ + AK + Y++PE ++ D +S G +
Sbjct: 152 KQNVKLGDFGLARILNHDEDFAKEFVGTPY------YMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 384 LYEMIEGVQPFHPKPPEEVV-KLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRP 442
LYE+ + PF +E+ K+ + +R P + Y +L E+I + K RP
Sbjct: 206 LYELCALMPPFTAFSQKELAGKIREGKFRRIPYR-----YSDELNEIITRMLNLKDYHRP 260
Query: 443 NFNEII 448
+ EI+
Sbjct: 261 SVEEIL 266
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 18/231 (7%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
VK+++K S K+ + + E+ +++K HPN+++ + + IV E + G+L
Sbjct: 52 VKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISG 331
+ K+ R S R + G+ Y+H+ I+H DLKP+NILL++ + +KI
Sbjct: 111 EIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 332 FGLLR-LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
FGL Q + K +I Y+APE+ + +D D +S G+ILY ++ G
Sbjct: 168 FGLSTCFQQNTKMKDRI--------GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
Query: 391 VQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIR 441
PF+ K +++K + GK + R+ D K+LI + P +R
Sbjct: 219 TPPFYGKNEYDILKRVET-GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 18/231 (7%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
VK+++K S K+ + + E+ +++K HPN+++ + + IV E + G+L
Sbjct: 52 VKVINKASAKNKD-TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISG 331
+ K+ R S R + G+ Y+H+ I+H DLKP+NILL++ + +KI
Sbjct: 111 EIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 332 FGLLR-LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
FGL Q + K +I Y+APE+ + +D D +S G+ILY ++ G
Sbjct: 168 FGLSTCFQQNTKMKDRI--------GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG 218
Query: 391 VQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIR 441
PF+ K +++K + GK + R+ D K+LI + P +R
Sbjct: 219 TPPFYGKNEYDILKRVET-GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 27/240 (11%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP----MMIVLEYHA 268
W ++ D++ K ER F E ++ +HPN+V+F + + +++V E
Sbjct: 55 AWCELQDRKLTK-SER-QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXT 112
Query: 269 KGDLASYLQKKGRLSPSKVLR-FALDLARGMNYLHECKPDPIIHCDLKPKNILLDN-GGQ 326
G L +YL K+ ++ KVLR + + +G+ +LH P PIIH DLK NI + G
Sbjct: 113 SGTLKTYL-KRFKVXKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGS 170
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI GL L+ S KA I P + APE Y+ E++D SVD Y+FG E
Sbjct: 171 VKIGDLGLATLKRASFAKAVIGTPE--------FXAPEXYE-EKYDESVDVYAFGXCXLE 221
Query: 387 MIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNE 446
P+ + G +P K P++KE+IE C IR N +E
Sbjct: 222 XATSEYPYSECQNAAQIYRRVTSGVKPASFDKVA--IPEVKEIIEGC------IRQNKDE 273
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 52/325 (16%)
Query: 165 PKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNG-------TKVWVKI 217
P +R P+ + EY N +E +G +Q A+ G T V VK+
Sbjct: 26 PMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQ-ARAPGLLPYEPFTMVAVKM 84
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ 277
L +E+ D + F E ++ + +PN+V+ +G PM ++ EY A GDL +L+
Sbjct: 85 LKEEASADMQ--ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLR 142
Query: 278 K----------------KGR--------LSPSKVLRFALDLARGMNYLHECKPDPIIHCD 313
+ R LS ++ L A +A GM YL E K +H D
Sbjct: 143 SMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRD 199
Query: 314 LKPKNILLDNGGQLKISGFGLLRLQYIS---PEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
L +N L+ +KI+ FGL R Y + P+ + P +++
Sbjct: 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-------NR 252
Query: 371 FDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKEL 429
+ D +++G++L+E+ G+QP++ EEV+ + + + + P +L L
Sbjct: 253 YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV----RDGNILACPENCPLELYNL 308
Query: 430 IEECWDPKPVIRPNFNEIIARLDRI 454
+ CW P RP+F I L R+
Sbjct: 309 MRLCWSKLPADRPSFCSIHRILQRM 333
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 46/288 (15%)
Query: 191 QVRKADGITKGSY---QVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
Q++ I KG Y + KW G KV VK+ R + + RH N+
Sbjct: 38 QIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLM----RHENI 93
Query: 248 VQFVGAVTQNI----PMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH- 302
+ F+ A + + ++ +YH G L YL K L +L+ A G+ +LH
Sbjct: 94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-KSTTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 303 -----ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPA 357
+ KP I H DLK KNIL+ G I+ G L +++IS + P + +
Sbjct: 153 EIFSTQGKP-AIAHRDLKSKNILVKKNGTCCIADLG-LAVKFISDTNEVDIPPNTRVGTK 210
Query: 358 NLYVAPEIYKNEEFDRS-------VDAYSFGLILYE---------MIEGVQ-PFH---PK 397
Y+ PE+ +E +R+ D YSFGLIL+E ++E Q P+H P
Sbjct: 211 R-YMPPEVL-DESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268
Query: 398 PP--EEVVKLMCCEGKRP--PLKIKARSYPPDLKELIEECWDPKPVIR 441
P E++ +++C + RP P + + + +L+ ECW P R
Sbjct: 269 DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Query: 235 ELTIVEK------ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVL 288
E T+VEK + P + Q + V+EY GDL ++Q+ GR +
Sbjct: 65 ECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV 124
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+A ++A G+ +L + II+ DLK N++LD+ G +KI+ FG+ + K
Sbjct: 125 FYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF 181
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
Y+APEI + + +SVD ++FG++LYEM+ G PF + +E+ +
Sbjct: 182 CGTPD------YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 231
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V VKI+DK + + + E+ I++ HPN+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +V+EY + G++ YL GR+ + + + Y C I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY---CHQKFIVHR 137
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG ++ K + + Y APE+++ +++D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN-EFTFGNK------LDTFCGSPPYAAPELFQGKKYD 190
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
VD +S G+ILY ++ G PF + +E+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V VKI+DK + + + E+ I++ HPN+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +V+EY + G++ YL GR+ + + + Y C I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY---CHQKFIVHR 137
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG ++ K + + Y APE+++ +++D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN-EFTFGNK------LDTFCGSPPYAAPELFQGKKYD 190
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
VD +S G+ILY ++ G PF + +E+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 51/306 (16%)
Query: 185 LNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARH 244
L LE++ R G + + ++ K++ I DK+S ++ +E+ + +H
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIF-PIQDKQSWQNE-------YEVYSLPGMKH 77
Query: 245 PNVVQFVGA----VTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNY 300
N++QF+GA + ++ + ++ +H KG L+ +L K +S +++ A +ARG+ Y
Sbjct: 78 ENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-KANVVSWNELCHIAETMARGLAY 136
Query: 301 LHECKPD-------PIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
LHE P I H D+K KN+LL N I+ FGL + E K
Sbjct: 137 LHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA----LKFEAGKSAGDTHG 192
Query: 354 IDPANLYVAPEI------YKNEEFDRSVDAYSFGLILYEMI-----------EGVQPF-- 394
Y+APE+ ++ + F R +D Y+ GL+L+E+ E + PF
Sbjct: 193 QVGTRRYMAPEVLEGAINFQRDAFLR-IDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251
Query: 395 ----HPKPPEEVVKLMCCEGKRPPLKIKARSYP--PDLKELIEECWDPKPVIRPNFNEII 448
HP E++ +++ + KRP L+ + + L E IEECWD R + +
Sbjct: 252 EIGQHP-SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310
Query: 449 ARLDRI 454
R+ ++
Sbjct: 311 ERITQM 316
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V V+I+DK + + + E+ I++ HPN+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +V+EY + G++ YL GR+ + + + Y C I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY---CHQKFIVHR 137
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG ++ K + + Y APE+++ +++D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN-EFTFGNK------LDEFCGSPPYAAPELFQGKKYD 190
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
VD +S G+ILY ++ G PF + +E+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 22/269 (8%)
Query: 185 LNPLELQVRKADGITKGSY-QVAKW--NGTK--VWVKILDKESHKDPERINAFTHELTIV 239
++P EL K D I KGS+ +V K N TK V +KI+D E + + I E+T++
Sbjct: 15 VDPEEL-FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAE--DEIEDIQQEITVL 71
Query: 240 EKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMN 299
+ P + ++ G+ ++ + I++EY G A L K G L + + ++ +G++
Sbjct: 72 SQCDSPYITRYFGSYLKSTKLWIIMEYLGGGS-ALDLLKPGPLEETYIATILREILKGLD 130
Query: 300 YLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL 359
YLH + IH D+K N+LL G +K++ FG ++ + +
Sbjct: 131 YLHSERK---IHRDIKAANVLLSEQGDVKLADFG------VAGQLTDTQIKRNXFVGTPF 181
Query: 360 YVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKA 419
++APE+ K +D D +S G+ E+ +G P P V+ L+ K P ++
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP---KNSPPTLEG 238
Query: 420 RSYPPDLKELIEECWDPKPVIRPNFNEII 448
+ P KE +E C + P RP E++
Sbjct: 239 QHSKP-FKEFVEACLNKDPRFRPTAKELL 266
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM----MIVLEYHA 268
V VK+L + +DP F E HP +V P IV+EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
L + +G ++P + + D + +N+ H+ + IIH D+KP NI++ +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVK 156
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
+ FG+ R I+ + + I A Y++PE + + D D YS G +LYE++
Sbjct: 157 VMDFGIARA--IADSGNSVTQTAAVIGTAQ-YLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPP 414
G PF P+ V E PP
Sbjct: 214 TGEPPFTGDSPDSVAYQHVREDPIPP 239
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 28/233 (12%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL--------------- 276
F E ++ +H ++V+F G P+++V EY GDL +L
Sbjct: 64 FQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 277 -QKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
Q KG L S++L A +A GM YL +H DL +N L+ +KI FG+
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
Query: 336 RLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPF 394
R Y S + ++ H ++ PE +F D +SFG+IL+E+ G QP+
Sbjct: 181 RDVY-STDYYRV---GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW 236
Query: 395 HPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
EV++ C R + + R P ++ +++ CW +P R N EI
Sbjct: 237 FQLSNTEVIE--CITQGR--VLERPRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V V+I+DK + + + E+ I++ HPN+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +V+EY + G++ YL GR+ + + + Y C I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY---CHQKFIVHR 137
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG ++ K + + Y APE+++ +++D
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSN-EFTFGNK------LDTFCGSPPYAAPELFQGKKYD 190
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
VD +S G+ILY ++ G PF + +E+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 134/307 (43%), Gaps = 58/307 (18%)
Query: 191 QVRKADGITKGSY-QVAK--WNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247
QV + + KG Y +V + W+G V VKI + R + + + RH N+
Sbjct: 9 QVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNI 64
Query: 248 VQFVGA----VTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH- 302
+ F+ + + + ++ YH G L +LQ++ L P LR A+ A G+ +LH
Sbjct: 65 LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ-TLEPHLALRLAVSAACGLAHLHV 123
Query: 303 -----ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPA 357
+ KP I H D K +N+L+ + Q I+ GL + + ++D
Sbjct: 124 EIFGTQGKP-AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSD---------YLDIG 173
Query: 358 N-------LYVAPEIYKNE------EFDRSVDAYSFGLILYEM-----IEGVQ-----PF 394
N Y+APE+ + E + D ++FGL+L+E+ + G+ PF
Sbjct: 174 NNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPF 233
Query: 395 HPKPP-----EEVVKLMCCEGKRP--PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
+ P E++ K++C + + P P ++ A L +++ ECW P P R I
Sbjct: 234 YDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRI 293
Query: 448 IARLDRI 454
L +I
Sbjct: 294 KKTLQKI 300
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR--LSPSKVLRFA 291
+E I+EK VV A + +VL GDL ++ G+ ++ + +A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
++ G+ LH + I++ DLKP+NILLD+ G ++IS GL PE I V
Sbjct: 293 AEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGL---AVHVPEGQTIKGRV 346
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPP----EEVVKLMC 407
+ Y+APE+ KNE + S D ++ G +LYEMI G PF + EEV +L+
Sbjct: 347 GTVG----YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV- 401
Query: 408 CEGKRPPLKIKARSYPPDLKELIEE--CWDP 436
K P + R + P + L + C DP
Sbjct: 402 ---KEVPEEYSER-FSPQARSLCSQLLCKDP 428
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR--LSPSKVLRFA 291
+E I+EK VV A + +VL GDL ++ G+ ++ + +A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
++ G+ LH + I++ DLKP+NILLD+ G ++IS GL PE I V
Sbjct: 293 AEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGL---AVHVPEGQTIKGRV 346
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPP----EEVVKLMC 407
+ Y+APE+ KNE + S D ++ G +LYEMI G PF + EEV +L+
Sbjct: 347 GTVG----YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV- 401
Query: 408 CEGKRPPLKIKARSYPPDLKELIEE--CWDP 436
K P + R + P + L + C DP
Sbjct: 402 ---KEVPEEYSER-FSPQARSLCSQLLCKDP 428
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 101/238 (42%), Gaps = 32/238 (13%)
Query: 225 DPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSP 284
D E F E+ ++ HPNV++F+G + ++ + + EY G L ++ P
Sbjct: 47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP 106
Query: 285 -SKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPE 343
S+ + FA D+A GM YLH IIH DL N L+ + ++ FGL RL
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
Query: 344 KAKIVFPVSHIDPANLY--------VAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
+ + + + D Y +APE+ +D VD +SFG++L E+I V
Sbjct: 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVN--- 220
Query: 396 PKPPEEVVKLMCCEGKRPPLKIKARSY---------PPDLKELIEECWDPKPVIRPNF 444
P+ + + M + R + PP + C D P RP+F
Sbjct: 221 -ADPDYLPRTM-------DFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSF 270
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM----MIVLEYHA 268
V VK+L + +DP F E HP +V P IV+EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
L + +G ++P + + D + +N+ H+ + IIH D+KP NI++ +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVK 156
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
+ FG+ R I+ + + I A Y++PE + + D D YS G +LYE++
Sbjct: 157 VMDFGIARA--IADSGNSVTQTAAVIGTAQ-YLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPP 414
G PF P V E PP
Sbjct: 214 TGEPPFTGDSPVSVAYQHVREDPIPP 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V VKI+DK + + + E+ I + HPN+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +V EY + G++ YL GR + + + Y C I+H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY---CHQKFIVHR 137
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG ++ K + A Y APE+++ +++D
Sbjct: 138 DLKAENLLLDADXNIKIADFGFSN-EFTFGNK------LDAFCGAPPYAAPELFQGKKYD 190
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
VD +S G+ILY ++ G PF + +E+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 7/180 (3%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 63 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 122
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 123 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGT 179
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
++ +SPE +K S + A YV+PE+ + +S D ++ G I+Y+++ G+ PF
Sbjct: 180 AKV--LSPE-SKQARANSFVGTAQ-YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM----MIVLEYHA 268
V VK+L + +DP F E HP +V P IV+EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
L + +G ++P + + D + +N+ H+ + IIH D+KP NIL+ +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANILISATNAVK 156
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
+ FG+ R I+ + + I A Y++PE + + D D YS G +LYE++
Sbjct: 157 VVDFGIARA--IADSGNSVXQTAAVIGTAQ-YLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPP 414
G PF P V E PP
Sbjct: 214 TGEPPFTGDSPVSVAYQHVREDPIPP 239
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 28/256 (10%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEY 266
G V VK L + P+ + + E+ I+ H ++V++ G + +V+EY
Sbjct: 37 TGEMVAVKALKEGC--GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G L YL + + +++L FA + GM YLH IH L +N+LLDN
Sbjct: 95 VPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRL 150
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI FGL + PE + D + APE K +F + D +SFG+ LYE
Sbjct: 151 VKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYE 207
Query: 387 MI---EGVQPFHPKPPE---------EVVKL--MCCEGKRPPLKIKARSYPPDLKELIEE 432
++ + Q H K E V++L + G+R P + P ++ L++
Sbjct: 208 LLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP---RPDRCPCEIYHLMKN 264
Query: 433 CWDPKPVIRPNFNEII 448
CW+ + RP F ++
Sbjct: 265 CWETEASFRPTFQNLV 280
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 26/256 (10%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEY 266
+GT V + + P+ + + E+ I+ H ++V++ G + +V+EY
Sbjct: 34 DGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G L YL + + +++L FA + GM YLH IH L +N+LLDN
Sbjct: 94 VPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRL 149
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI FGL + PE + D + APE K +F + D +SFG+ LYE
Sbjct: 150 VKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYE 206
Query: 387 MI---EGVQPFHPKPPE---------EVVKL--MCCEGKRPPLKIKARSYPPDLKELIEE 432
++ + Q H K E V++L + G+R P + P ++ L++
Sbjct: 207 LLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP---RPDRCPCEIYHLMKN 263
Query: 433 CWDPKPVIRPNFNEII 448
CW+ + RP F ++
Sbjct: 264 CWETEASFRPTFQNLV 279
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 197 GITKGSYQ---VAKWNGTK--VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFV 251
I KGS+ + + N TK +K ++K+ + + EL I++ HP +V
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ M +V++ GDL +LQ+ V F +L ++YL + IIH
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR---IIH 138
Query: 312 CDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY---KN 368
D+KP NILLD G + I+ F + + P + +I ++ P Y+APE++ K
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAM---LPRETQIT-TMAGTKP---YMAPEMFSSRKG 191
Query: 369 EEFDRSVDAYSFGLILYEMIEGVQPFH 395
+ +VD +S G+ YE++ G +P+H
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRPYH 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
KV +K + ++ K + E++ ++ RHP++++ +T +++V+EY A G+
Sbjct: 36 KVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGE 94
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L Y+ +K R++ + RF + + Y H K I+H DLKP+N+LLD+ +KI+
Sbjct: 95 LFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIAD 151
Query: 332 FGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM 387
FGL + ++ + + LY PE VD +S G++LY M
Sbjct: 152 FGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPE----------VDVWSCGIVLYVM 201
Query: 388 IEGVQPF 394
+ G PF
Sbjct: 202 LVGRLPF 208
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 7/180 (3%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 59 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 118
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 119 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGT 175
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
++ +SPE +K S + A YV+PE+ + +S D ++ G I+Y+++ G+ PF
Sbjct: 176 AKV--LSPE-SKQARANSFVGTAQ-YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L+K GR+ + +
Sbjct: 68 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 127
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + +G+ YL E I+H D+KP NIL+++ G++K+ FG + Q I V
Sbjct: 128 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFVG 184
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPE-EVVKLMCC 408
S Y++PE + + D +S GL L EM G P + +L+
Sbjct: 185 TRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDY 237
Query: 409 EGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
PP K+ + + + ++ + +C P R + +++
Sbjct: 238 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 279
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM----MIVLEYHA 268
V VK+L + +DP F E HP +V P IV+EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
L + +G ++P + + D + +N+ H+ + IIH D+KP NI++ +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVK 156
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
+ FG+ R I+ + + I A Y++PE + + D D YS G +LYE++
Sbjct: 157 VMDFGIARA--IADSGNSVTQTAAVIGTAQ-YLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPP 414
G PF P V E PP
Sbjct: 214 TGEPPFTGDSPVSVAYQHVREDPIPP 239
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM----MIVLEYHA 268
V VK+L + +DP F E HP +V P IV+EY
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
L + +G ++P + + D + +N+ H+ + IIH D+KP NI++ +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVK 156
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
+ FG+ R I+ + + I A Y++PE + + D D YS G +LYE++
Sbjct: 157 VMDFGIARA--IADSGNSVTQTAAVIGTAQ-YLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPP 414
G PF P V E PP
Sbjct: 214 TGEPPFTGDSPVSVAYQHVREDPIPP 239
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G L
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLK 121
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGT 178
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
++ +SPE +K S + A YV+PE+ + +S D ++ G I+Y+++ G+ PF
Sbjct: 179 AKV--LSPE-SKQARANSFVGTAQ-YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 25/218 (11%)
Query: 198 ITKGSY---QVAKWNGTK--VWVKILDKESHKDPERINAFTHELTIVEK------ARHPN 246
+ KGS+ +A GT+ +KIL K+ + + E T+VEK + P
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDV-----ECTMVEKRVLALLDKPPF 81
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKP 306
+ Q + V+EY GDL ++Q+ G+ + + +A +++ G+ +LH+
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHK--- 138
Query: 307 DPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
II+ DLK N++LD+ G +KI+ FG+ + + + Y+APEI
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPD------YIAPEII 192
Query: 367 KNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
+ + +SVD +++G++LYEM+ G PF + +E+ +
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 230
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM 260
G +W G + VK+L K + F E + HPNV+ +GA Q+ P
Sbjct: 24 GELWKGRWQGNDIVVKVL-KVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC-QSPPA 81
Query: 261 ---MIVLEYHAKGDLASYLQKKGR--LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLK 315
++ + G L + L + + S+ ++FALD+ARGM +LH +P H L
Sbjct: 82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LN 140
Query: 316 PKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD--- 372
+++++D +IS ++ + SP + A +VAPE + + D
Sbjct: 141 SRSVMIDEDMTARIS-MADVKFSFQSPGRMY----------APAWVAPEALQKKPEDTNR 189
Query: 373 RSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
RS D +SF ++L+E++ PF E+ + EG RP + P + +L++
Sbjct: 190 RSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI---PPGISPHVSKLMKI 246
Query: 433 CWDPKPVIRPNFNEIIARLDRI 454
C + P RP F+ I+ L+++
Sbjct: 247 CMNEDPAKRPKFDMIVPILEKM 268
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 209 NGTKVWVKILDKESHKDPERI-NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYH 267
N T V VK L E + F E+ ++ K +H N+V+ +G + + +V Y
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 268 AKGDLA---SYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNG 324
G L S L LS + A A G+N+LHE + IH D+K NILLD
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEA 169
Query: 325 GQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLIL 384
KIS FGL R + EK S I Y+APE + E +S D YSFG++L
Sbjct: 170 FTAKISDFGLAR----ASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKS-DIYSFGVVL 224
Query: 385 YEMIEGV 391
E+I G+
Sbjct: 225 LEIITGL 231
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM----MIVLEYHA 268
V VK+L + +DP F E HP +V P IV+EY
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
L + +G ++P + + D + +N+ H+ + IIH D+KP NI++ +K
Sbjct: 117 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVK 173
Query: 329 ISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
+ FG+ R I+ + + I A Y++PE + + D D YS G +LYE++
Sbjct: 174 VMDFGIARA--IADSGNSVTQTAAVIGTAQ-YLSPEQARGDSVDARSDVYSLGCVLYEVL 230
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPP 414
G PF P V E PP
Sbjct: 231 TGEPPFTGDSPVSVAYQHVREDPIPP 256
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 188 LELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHK-DPERINAFTHELTIVEKARHPN 246
+EL + +G Y++ K V +K+L + + K D E + E I+ + +P
Sbjct: 16 IELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEM---MREAQIMHQLDNPY 71
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYL-QKKGRLSPSKVLRFALDLARGMNYLHECK 305
+V+ +G V Q +M+V+E G L +L K+ + S V ++ GM YL E
Sbjct: 72 IVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE-- 128
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEI 365
+H DL +N+LL N KIS FGL + + + + + P Y APE
Sbjct: 129 -KNFVHRDLAARNVLLVNRHYAKISDFGLSKA--LGADDSYYTARSAGKWPLKWY-APEC 184
Query: 366 YKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR---PPLKIKARS 421
+F D +S+G+ ++E + G +P+ EV+ + +GKR PP
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRMECPP------E 237
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
PP+L L+ +CW K RP+F + R+
Sbjct: 238 CPPELYALMSDCWIYKWEDRPDFLTVEQRM 267
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 7/180 (3%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 60 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 119
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGT 176
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
++ +SPE +K + + A YV+PE+ + +S D ++ G I+Y+++ G+ PF
Sbjct: 177 AKV--LSPE-SKQARANAFVGTAQ-YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGT 178
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
++ +SPE +K + A YV+PE+ + +S D ++ G I+Y+++ G+ PF
Sbjct: 179 AKV--LSPE-SKQARANXFVGTAQ-YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH 302
RHPN+V+F + + I++EY + G+L + GR S + F L G++Y H
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 303 ECKPDPIIHCDLKPKNILLDN--GGQLKISGFGLLRLQYI-SPEKAKIVFPVSHIDPANL 359
+ I H DLK +N LLD +LKI FG + + S K+ + P
Sbjct: 134 SMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA-------- 182
Query: 360 YVAPEIYKNEEFDRSV-DAYSFGLILYEMIEGVQPFHPKPPEE 401
Y+APE+ +E+D + D +S G+ LY M+ G PF + PEE
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF--EDPEE 223
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+L+ A G+ V+DL+ G+DVN+ D DGRT LH AA EGH E+VKLL+SK A+++A+
Sbjct: 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAK 66
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVA---NPREVPEYELNP- 187
D G T A G+ E+ +L ++GA V RTP+ A +E+ + ++
Sbjct: 67 DSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKG 126
Query: 188 LELQVRKADGITKGSYQVAKWNGTKVWVKILDKES 222
++ +DG T +A+ +G + VK+L+K+
Sbjct: 127 ADVNTSDSDGRT--PLDLAREHGNEEIVKLLEKQG 159
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L + A G + V+ L+++G+DVN+ D DGRT LH AA EGH E+VKLL+SK A+
Sbjct: 36 DGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGAD 95
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTK---RTPMTVA 175
++A+D G T A G+ E+ +L ++GA V + RTP+ +A
Sbjct: 96 VNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDLA 143
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L + A G + V+ L+++G+DVN+ D DGRT LH AA EGH E+VKLL+SK A+
Sbjct: 69 DGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGAD 128
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGA 162
++ D G T A+ +GN E+ +L+ +G
Sbjct: 129 VNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 39 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 98
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 99 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 154
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 155 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 205
Query: 389 EGVQPF 394
G+ PF
Sbjct: 206 AGLPPF 211
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAK 269
G K+ KI+ KD E + +E++++ + H N++Q A +++V+EY
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVK---NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170
Query: 270 GDLAS-YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDN--GGQ 326
G+L + + L+ + F + G+ ++H+ I+H DLKP+NIL N Q
Sbjct: 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQ 227
Query: 327 LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE 386
+KI FGL R +Y EK K+ F ++APE+ + D +S G+I Y
Sbjct: 228 IKIIDFGLAR-RYKPREKLKVNFGTPE------FLAPEVVNYDFVSFPTDMWSVGVIAYM 280
Query: 387 MIEGVQPF-HPKPPEEVVKLMCC 408
++ G+ PF E + ++ C
Sbjct: 281 LLSGLSPFLGDNDAETLNNILAC 303
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 38 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 97
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 98 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 153
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 154 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204
Query: 389 EGVQPF 394
G+ PF
Sbjct: 205 AGLPPF 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 40 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 99
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 100 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 155
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 156 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 206
Query: 389 EGVQPF 394
G+ PF
Sbjct: 207 AGLPPF 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 195 ADGITKGSYQVAKW----------------NGTKVWVKILDKESHKDPERINAFTHELTI 238
ADG G+YQ+ K G KV +KI++K+ + E++
Sbjct: 8 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 67
Query: 239 VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGM 298
+ RHP++++ + +++V+EY A +L Y+ ++ ++S + RF + +
Sbjct: 68 LRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAV 126
Query: 299 NYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHI 354
Y H K I+H DLKP+N+LLD +KI+ FGL + ++ + +
Sbjct: 127 EYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 183
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
LY PE VD +S G+ILY M+ PF
Sbjct: 184 ISGKLYAGPE----------VDVWSCGVILYVMLCRRLPF 213
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 37 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 96
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 97 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 152
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 153 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 203
Query: 389 EGVQPF 394
G+ PF
Sbjct: 204 AGLPPF 209
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 60 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 119
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 175
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 176 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 389 EGVQPF 394
G+ PF
Sbjct: 227 AGLPPF 232
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKA-RHPNVVQFVGAVTQ 256
I G++ VA+ K +++ + + E+I A I ++ RHPN+V+F +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 257 NIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
+ IV+EY + G+L + GR S + F L G++Y H + + H DLK
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKL 143
Query: 317 KNILLDN--GGQLKISGFGLLRLQYI-SPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDR 373
+N LLD +LKI FG + + S K+ + P Y+APE+ +E+D
Sbjct: 144 ENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA--------YIAPEVLLKKEYDG 195
Query: 374 SV-DAYSFGLILYEMIEGVQPFHPKPPEE 401
V D +S G+ LY M+ G PF + PEE
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPF--EDPEE 222
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
I KG++ K G +V VKI+DK + + + E+ I++ HPN+V+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + +V+EY + G++ YL G + + + + Y C I+H
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY---CHQKFIVHR 130
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
DLK +N+LLD +KI+ FG ++ K + + Y APE+++ +++D
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSN-EFTFGNK------LDTFCGSPPYAAPELFQGKKYD 183
Query: 373 R-SVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
VD +S G+ILY ++ G PF + +E+
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 195 ADGITKGSYQVAKW----------------NGTKVWVKILDKESHKDPERINAFTHELTI 238
ADG G+YQ+ K G KV +KI++K+ + E++
Sbjct: 7 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 66
Query: 239 VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGM 298
+ RHP++++ + +++V+EY A +L Y+ ++ ++S + RF + +
Sbjct: 67 LRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAV 125
Query: 299 NYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHI 354
Y H K I+H DLKP+N+LLD +KI+ FGL + ++ + +
Sbjct: 126 EYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 182
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
LY PE VD +S G+ILY M+ PF
Sbjct: 183 ISGKLYAGPE----------VDVWSCGVILYVMLCRRLPF 212
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH 302
RHPN+V+F + + IV+EY + G+L + GR S + F L G++Y H
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 303 ECKPDPIIHCDLKPKNILLDN--GGQLKISGFGLLRLQYI-SPEKAKIVFPVSHIDPANL 359
+ + H DLK +N LLD +LKI+ FG + + S K+ + P
Sbjct: 133 AMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPA-------- 181
Query: 360 YVAPEIYKNEEFDRSV-DAYSFGLILYEMIEGVQPFHPKPPEE 401
Y+APE+ +E+D V D +S G+ LY M+ G PF + PEE
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEE 222
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 60 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 119
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 175
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 176 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 389 EGVQPF 394
G+ PF
Sbjct: 227 AGLPPF 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 177
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 178 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 389 EGVQPF 394
G+ PF
Sbjct: 229 AGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 177
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 178 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 389 EGVQPF 394
G+ PF
Sbjct: 229 AGLPPF 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 195 ADGITKGSYQVAKW----------------NGTKVWVKILDKESHKDPERINAFTHELTI 238
ADG G+YQ+ K G KV +KI++K+ + E++
Sbjct: 2 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 61
Query: 239 VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGM 298
+ RHP++++ + +++V+EY A +L Y+ ++ ++S + RF + +
Sbjct: 62 LRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAV 120
Query: 299 NYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHI 354
Y H K I+H DLKP+N+LLD +KI+ FGL + ++ + +
Sbjct: 121 EYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 177
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
LY PE VD +S G+ILY M+ PF
Sbjct: 178 ISGKLYAGPE----------VDVWSCGVILYVMLCRRLPF 207
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 63 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 122
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 123 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 178
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 179 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
Query: 389 EGVQPF 394
G+ PF
Sbjct: 230 AGLPPF 235
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 60 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 119
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 175
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 176 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 389 EGVQPF 394
G+ PF
Sbjct: 227 AGLPPF 232
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 67 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLK 126
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 127 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 182
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 183 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 233
Query: 389 EGVQPF 394
G+ PF
Sbjct: 234 AGLPPF 239
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH 302
RHPN+V+F + + IV+EY + G+L + GR S + F L G++Y H
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 303 ECKPDPIIHCDLKPKNILLDN--GGQLKISGFGLLRLQYI-SPEKAKIVFPVSHIDPANL 359
+ + H DLK +N LLD +LKI FG + + S K+ + P
Sbjct: 133 AMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPA-------- 181
Query: 360 YVAPEIYKNEEFDRSV-DAYSFGLILYEMIEGVQPFHPKPPEE 401
Y+APE+ +E+D V D +S G+ LY M+ G PF + PEE
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEE 222
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 177
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 178 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 389 EGVQPF 394
G+ PF
Sbjct: 229 AGLPPF 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 121
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 177
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 178 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 389 EGVQPF 394
G+ PF
Sbjct: 229 AGLPPF 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 149 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 391 VQPF 394
P+
Sbjct: 205 ELPW 208
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 44 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 103
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 104 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 159
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 160 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 210
Query: 389 EGVQPF 394
G+ PF
Sbjct: 211 AGLPPF 216
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264.
pdb|4GPM|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264
Length = 169
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 9/155 (5%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+L+ A G+ V+DL+ G+DVN+ D DGRT LH AA GH EVVKLL+SK A+++A+
Sbjct: 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAK 66
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVA---NPREVPEYELNP- 187
D G T A G+ EV +L ++GA V RTP+ A +EV + ++
Sbjct: 67 DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 126
Query: 188 LELQVRKADGITKGSYQVAKWNGTKVWVKILDKES 222
++ +DG T +A+ +G + VK+L+K+
Sbjct: 127 ADVNTSDSDGRT--PLDLAREHGNEEVVKLLEKQG 159
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G + V+ L+++G+DVN+ D DGRT LH AA GH EVVKLL+SK A+
Sbjct: 36 DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD 95
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTK---RTPMTVA 175
++A+D G T A G+ EV +L ++GA V + RTP+ +A
Sbjct: 96 VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLA 143
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G + V+ L+++G+DVN+ D DGRT LH AA GH EVVKLL+SK A+
Sbjct: 69 DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD 128
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGA 162
++ D G T A+ +GN EV +L+ +G
Sbjct: 129 VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 65 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 124
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 125 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 180
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 181 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 231
Query: 389 EGVQPF 394
G+ PF
Sbjct: 232 AGLPPF 237
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 86/187 (45%), Gaps = 12/187 (6%)
Query: 209 NGTKVWVKILDKESHKDPERI-NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYH 267
N T V VK L E + F E+ + K +H N+V+ +G + + +V Y
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 268 AKGDLA---SYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNG 324
G L S L LS + A A G+N+LHE + IH D+K NILLD
Sbjct: 104 PNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEA 160
Query: 325 GQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLIL 384
KIS FGL R + EK S I Y APE + E +S D YSFG++L
Sbjct: 161 FTAKISDFGLAR----ASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKS-DIYSFGVVL 215
Query: 385 YEMIEGV 391
E+I G+
Sbjct: 216 LEIITGL 222
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 149 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 391 VQPF 394
P+
Sbjct: 205 ELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 149 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 391 VQPF 394
P+
Sbjct: 205 ELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 149 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 391 VQPF 394
P+
Sbjct: 205 ELPW 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 33 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 90 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 146
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 147 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
Query: 391 VQPF 394
P+
Sbjct: 203 ELPW 206
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
+KIL+K ++ T E ++ + HP V+ + + L Y G+L
Sbjct: 59 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLK 118
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
Y++K G + + ++ + YLH IIH DLKP+NILL+ ++I+ FG
Sbjct: 119 YIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG- 174
Query: 335 LRLQYISPEKAKIVFPVSHIDPANL------YVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
AK++ P S AN YV+PE+ + +S D ++ G I+Y+++
Sbjct: 175 ---------TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
Query: 389 EGVQPF 394
G+ PF
Sbjct: 226 AGLPPF 231
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH 302
RHPN+V+F + + IV+EY + G+L + GR S + F L G++Y H
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 303 ECKPDPIIHCDLKPKNILLDN--GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLY 360
+ + H DLK +N LLD +LKI FG + + + V PA Y
Sbjct: 133 AMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVG-----TPA--Y 182
Query: 361 VAPEIYKNEEFDRSV-DAYSFGLILYEMIEGVQPFHPKPPEE 401
+APE+ +E+D V D +S G+ LY M+ G PF + PEE
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEE 222
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMXGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 31/238 (13%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLA---SYLQKKGRLSPSK-VLRF 290
E+ ++++ HPNV+++ + ++ + IVLE GDL+ + +K+ RL P + V ++
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ L + ++H + ++H D+KP N+ + G +K+ GL R A +
Sbjct: 142 FVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEG 410
+ Y++PE ++ D +S G +LYEM PF+ +++ C+
Sbjct: 199 TPY------YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY---GDKMNLYSLCK- 248
Query: 411 KRPPLKIKARSYPP--------DLKELIEECWDPKPVIRPNFNEIIARLDRI-VCNCS 459
KI+ YPP +L++L+ C +P P RP+ + R+ C S
Sbjct: 249 -----KIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH 302
RHPN+V+F + + IV+EY + G+L + GR S + F L G++Y H
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 303 ECKPDPIIHCDLKPKNILLDN--GGQLKISGFGLLRLQYI-SPEKAKIVFPVSHIDPANL 359
+ + H DLK +N LLD +LKI FG + + S K+ + P
Sbjct: 132 AMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA-------- 180
Query: 360 YVAPEIYKNEEFDRSV-DAYSFGLILYEMIEGVQPFHPKPPEE 401
Y+APE+ +E+D V D +S G+ LY M+ G PF + PEE
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEE 221
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 149 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 391 VQPF 394
P+
Sbjct: 205 ELPW 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMXGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMXGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 216 KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL-AS 274
K++D +S E + + E+ I+ HPN+V+ + A + I++E+ A G + A
Sbjct: 68 KVIDTKSE---EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
L+ + L+ S++ +NYLH+ K IIH DLK NIL G +K++ FG
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFG- 180
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIY-----KNEEFDRSVDAYSFGLILYEMIE 389
+S + + + ++APE+ K+ +D D +S G+ L EM E
Sbjct: 181 -----VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 235
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEEC 433
P H P V L+ PP + + + K+ +++C
Sbjct: 236 IEPPHHELNPMRV--LLKIAKSEPPTLAQPSRWSSNFKDFLKKC 277
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 149 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 391 VQPF 394
P+
Sbjct: 205 ELPW 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMXGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 147
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 148 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 391 VQPF 394
P+
Sbjct: 204 ELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I + H NVV+F G + + LEY + G+
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 149 FGLATV-FRYNNRERLLNKMXGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 391 VQPF 394
P+
Sbjct: 205 ELPW 208
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 209 NGTKVWVKILDKESHKDPERI-NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYH 267
N T V VK L E + F E+ ++ K +H N+V+ +G + + +V Y
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 268 AKGDLA---SYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNG 324
G L S L LS + A A G+N+LHE + IH D+K NILLD
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEA 169
Query: 325 GQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLIL 384
KIS FGL R + EK I Y+APE + E +S D YSFG++L
Sbjct: 170 FTAKISDFGLAR----ASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKS-DIYSFGVVL 224
Query: 385 YEMIEGV 391
E+I G+
Sbjct: 225 LEIITGL 231
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 35/267 (13%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
+GT V VK L +E + E F E+ ++ A H N+++ G ++V Y A
Sbjct: 61 DGTLVAVKRLKEERXQGGEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMA 118
Query: 269 KGDLASYLQKKGRLSPS----KVLRFALDLARGMNYLHE-CKPDPIIHCDLKPKNILLDN 323
G +AS L+++ P K R AL ARG+ YLH+ C P IIH D+K NILLD
Sbjct: 119 NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP-KIIHRDVKAANILLDE 177
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL----YVAPEIYKNEEFDRSVDAYS 379
+ + FGL +L + + H+ A ++APE + D +
Sbjct: 178 EFEAVVGDFGLAKL---------MDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFG 228
Query: 380 FGLILYEMIEGVQPF---HPKPPEEVVKLMCCEGKRPPLKIKA--------RSYPPDLKE 428
+G++L E+I G + F ++V+ L +G K++A ++++
Sbjct: 229 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQ 288
Query: 429 LIEE---CWDPKPVIRPNFNEIIARLD 452
LI+ C P+ RP +E++ L+
Sbjct: 289 LIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL 272
V +K + KE+ + E + +E+ ++ K +HPN+V + ++++ + G+L
Sbjct: 46 VAIKCIAKEALEGKE--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 273 ASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL---LDNGGQLKI 329
+ +KG + R + + YLH+ I+H DLKP+N+L LD ++ I
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMI 160
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE 389
S FGL ++ E V + P YVAPE+ + + ++VD +S G+I Y ++
Sbjct: 161 SDFGLSKM-----EDPGSVLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 390 GVQPFH 395
G PF+
Sbjct: 214 GYPPFY 219
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL 272
V +K + KE+ + E + +E+ ++ K +HPN+V + ++++ + G+L
Sbjct: 46 VAIKCIAKEALEGKE--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 273 ASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL---LDNGGQLKI 329
+ +KG + R + + YLH+ I+H DLKP+N+L LD ++ I
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMI 160
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE 389
S FGL ++ E V + P YVAPE+ + + ++VD +S G+I Y ++
Sbjct: 161 SDFGLSKM-----EDPGSVLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 390 GVQPFH 395
G PF+
Sbjct: 214 GYPPFY 219
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL 272
V +K + KE+ + E + +E+ ++ K +HPN+V + ++++ + G+L
Sbjct: 46 VAIKCIAKEALEGKE--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 273 ASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNIL---LDNGGQLKI 329
+ +KG + R + + YLH+ I+H DLKP+N+L LD ++ I
Sbjct: 104 FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE 389
S FGL ++ E V + P YVAPE+ + + ++VD +S G+I Y ++
Sbjct: 161 SDFGLSKM-----EDPGSVLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 390 GVQPFH 395
G PF+
Sbjct: 214 GYPPFY 219
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 90/184 (48%), Gaps = 12/184 (6%)
Query: 213 VWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGD 271
V VKI+D + D PE I E+ I H NVV+F G + + LEY + G+
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 272 LASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
L ++ + RF L G+ YLH I H D+KP+N+LLD LKIS
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISD 148
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS-VDAYSFGLILYEMIEG 390
FGL + + + +++ + P YVAPE+ K EF VD +S G++L M+ G
Sbjct: 149 FGLATV-FRYNNRERLLNKMCGTLP---YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 391 VQPF 394
P+
Sbjct: 205 ELPW 208
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 216 KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL-AS 274
K++D +S E + + E+ I+ HPN+V+ + A + I++E+ A G + A
Sbjct: 68 KVIDTKSE---EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
L+ + L+ S++ +NYLH+ K IIH DLK NIL G +K++ FG
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFG- 180
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIY-----KNEEFDRSVDAYSFGLILYEMIE 389
+S + + + ++APE+ K+ +D D +S G+ L EM E
Sbjct: 181 -----VSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 235
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEEC 433
P H P V L+ PP + + + K+ +++C
Sbjct: 236 IEPPHHELNPMRV--LLKIAKSEPPTLAQPSRWSSNFKDFLKKC 277
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 216 KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL-AS 274
K++D +S E + + E+ I+ HPN+V+ + A + I++E+ A G + A
Sbjct: 68 KVIDTKSE---EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
L+ + L+ S++ +NYLH+ K IIH DLK NIL G +K++ FG
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFG- 180
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIY-----KNEEFDRSVDAYSFGLILYEMIE 389
+S + + + ++APE+ K+ +D D +S G+ L EM E
Sbjct: 181 -----VSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 235
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEEC 433
P H P V L+ PP + + + K+ +++C
Sbjct: 236 IEPPHHELNPMRV--LLKIAKSEPPTLAQPSRWSSNFKDFLKKC 277
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L+K GR+ + +
Sbjct: 111 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 170
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + +G+ YL E I+H D+KP NIL+++ G++K+ FG + Q I V
Sbjct: 171 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFVG 227
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCE 409
S Y++PE + + D +S GL L EM G P P +E+ + C+
Sbjct: 228 TRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ 280
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L+K GR+ + +
Sbjct: 76 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 135
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + +G+ YL E I+H D+KP NIL+++ G++K+ FG + Q I V
Sbjct: 136 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFVG 192
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCE 409
S Y++PE + + D +S GL L EM G P P +E+ + C+
Sbjct: 193 TRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ 245
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 205 VAKWNGTKVWVKILDKESHK-DPERIN----AFTHELTIVEK-ARHPNVVQFVGAVTQNI 258
V + G + VKI++ + + PE++ A E I+ + A HP+++ + + +
Sbjct: 114 VHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173
Query: 259 PMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKN 318
M +V + KG+L YL +K LS + L +++LH + I+H DLKP+N
Sbjct: 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPEN 230
Query: 319 ILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL---------YVAPEIYK-- 367
ILLD+ Q+++S FG H++P Y+APEI K
Sbjct: 231 ILLDDNMQIRLSDFGF----------------SCHLEPGEKLRELCGTPGYLAPEILKCS 274
Query: 368 ----NEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + + VD ++ G+IL+ ++ G PF
Sbjct: 275 MDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 43/275 (15%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--- 257
G KW G +V VKI + R + + RH N++ F+ A ++
Sbjct: 43 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAADNKDNGT 98
Query: 258 -IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH------ECKPDPII 310
+ +V +YH G L YL + ++ +++ AL A G+ +LH + KP I
Sbjct: 99 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIA 156
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-- 368
H DLK KNIL+ G I+ GL +++ S + P +H Y+APE+ +
Sbjct: 157 HRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSI 214
Query: 369 -----EEFDRSVDAYSFGLILYEM-----IEGVQ-----PFH---PKPP--EEVVKLMCC 408
E F R+ D Y+ GL+ +E+ I G+ P++ P P EE+ K++C
Sbjct: 215 NMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 273
Query: 409 EGKRP--PLKIKARSYPPDLKELIEECWDPKPVIR 441
+ RP P + ++ + +++ ECW R
Sbjct: 274 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 308
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 43/275 (15%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--- 257
G KW G +V VKI + R + + RH N++ F+ A ++
Sbjct: 20 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAADNKDNGT 75
Query: 258 -IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH------ECKPDPII 310
+ +V +YH G L YL + ++ +++ AL A G+ +LH + KP I
Sbjct: 76 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIA 133
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-- 368
H DLK KNIL+ G I+ GL +++ S + P +H Y+APE+ +
Sbjct: 134 HRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSI 191
Query: 369 -----EEFDRSVDAYSFGLILYEM-----IEGVQ-----PFH---PKPP--EEVVKLMCC 408
E F R+ D Y+ GL+ +E+ I G+ P++ P P EE+ K++C
Sbjct: 192 NMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 250
Query: 409 EGKRP--PLKIKARSYPPDLKELIEECWDPKPVIR 441
+ RP P + ++ + +++ ECW R
Sbjct: 251 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 285
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L+K GR+ + +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + +G+ YL E I+H D+KP NIL+++ G++K+ FG + Q I V
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFVG 165
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCE 409
S Y++PE + + D +S GL L EM G P P +E+ + C+
Sbjct: 166 TRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ 218
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L+K GR+ + +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + +G+ YL E I+H D+KP NIL+++ G++K+ FG + Q I V
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFVG 165
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCE 409
S Y++PE + + D +S GL L EM G P P +E+ + C+
Sbjct: 166 TRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ 218
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 209 NGTKVWVKILDKESHKDPERI-NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYH 267
N T V VK L E + F E+ ++ K +H N+V+ +G + + +V Y
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 268 AKGDLA---SYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNG 324
G L S L LS + A A G+N+LHE + IH D+K NILLD
Sbjct: 107 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEA 163
Query: 325 GQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLIL 384
KIS FGL R + EK I Y+APE + E +S D YSFG++L
Sbjct: 164 FTAKISDFGLAR----ASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKS-DIYSFGVVL 218
Query: 385 YEMIEGV 391
E+I G+
Sbjct: 219 LEIITGL 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L+K GR+ + +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + +G+ YL E I+H D+KP NIL+++ G++K+ FG + Q I V
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFVG 165
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCE 409
S Y++PE + + D +S GL L EM G P P +E+ + C+
Sbjct: 166 TRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ 218
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L+K GR+ + +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + +G+ YL E I+H D+KP NIL+++ G++K+ FG + Q I V
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFVG 165
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCE 409
S Y++PE + + D +S GL L EM G P P +E+ + C+
Sbjct: 166 TRS-------YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 43/275 (15%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--- 257
G KW G +V VKI + R + + RH N++ F+ A ++
Sbjct: 23 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAADNKDNGT 78
Query: 258 -IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH------ECKPDPII 310
+ +V +YH G L YL + ++ +++ AL A G+ +LH + KP I
Sbjct: 79 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIA 136
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-- 368
H DLK KNIL+ G I+ GL +++ S + P +H Y+APE+ +
Sbjct: 137 HRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSI 194
Query: 369 -----EEFDRSVDAYSFGLILYEM-----IEGVQ-----PFH---PKPP--EEVVKLMCC 408
E F R+ D Y+ GL+ +E+ I G+ P++ P P EE+ K++C
Sbjct: 195 NMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 253
Query: 409 EGKRP--PLKIKARSYPPDLKELIEECWDPKPVIR 441
+ RP P + ++ + +++ ECW R
Sbjct: 254 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 288
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 43/275 (15%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--- 257
G KW G +V VKI + R + + RH N++ F+ A ++
Sbjct: 18 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAADNKDNGT 73
Query: 258 -IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH------ECKPDPII 310
+ +V +YH G L YL + ++ +++ AL A G+ +LH + KP I
Sbjct: 74 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIA 131
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-- 368
H DLK KNIL+ G I+ GL +++ S + P +H Y+APE+ +
Sbjct: 132 HRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSI 189
Query: 369 -----EEFDRSVDAYSFGLILYEM-----IEGVQ-----PFH---PKPP--EEVVKLMCC 408
E F R+ D Y+ GL+ +E+ I G+ P++ P P EE+ K++C
Sbjct: 190 NMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 248
Query: 409 EGKRP--PLKIKARSYPPDLKELIEECWDPKPVIR 441
+ RP P + ++ + +++ ECW R
Sbjct: 249 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 283
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 27/231 (11%)
Query: 180 VPEYELNPLELQVRKADGITKGSYQVAKW----NGTKVWVKILDKE-SHKDPERINAFTH 234
+P P E++ R G G V +W G +V +K +E S K+ ER +
Sbjct: 9 LPTQTCGPWEMKERLGTG---GFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER---WCL 62
Query: 235 ELTIVEKARHPNVVQF------VGAVTQNIPMMIVLEYHAKGDLASYLQKKGR---LSPS 285
E+ I++K HPNVV + + N ++ +EY GDL YL + L
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 122
Query: 286 KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKA 345
+ D++ + YLHE + IIH DLKP+NI+L G Q I ++ L Y + E
Sbjct: 123 PIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLI--HKIIDLGY-AKELD 176
Query: 346 KIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHP 396
+ + Y+APE+ + +++ +VD +SFG + +E I G +PF P
Sbjct: 177 QGELCTEFVGTLQ-YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 43/275 (15%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--- 257
G KW G +V VKI + R + + RH N++ F+ A ++
Sbjct: 17 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAADNKDNGT 72
Query: 258 -IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH------ECKPDPII 310
+ +V +YH G L YL + ++ +++ AL A G+ +LH + KP I
Sbjct: 73 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIA 130
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-- 368
H DLK KNIL+ G I+ GL +++ S + P +H Y+APE+ +
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSI 188
Query: 369 -----EEFDRSVDAYSFGLILYEM-----IEGVQ-----PFHPKPP-----EEVVKLMCC 408
E F R+ D Y+ GL+ +E+ I G+ P++ P EE+ K++C
Sbjct: 189 NMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 247
Query: 409 EGKRP--PLKIKARSYPPDLKELIEECWDPKPVIR 441
+ RP P + ++ + +++ ECW R
Sbjct: 248 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 282
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 43/268 (16%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--- 257
G KW G +V VKI + R + + RH N++ F+ A ++
Sbjct: 56 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENILGFIAADNKDNGT 111
Query: 258 -IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH------ECKPDPII 310
+ +V +YH G L YL + ++ +++ AL A G+ +LH + KP I
Sbjct: 112 WTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIA 169
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-- 368
H DLK KNIL+ G I+ GL +++ S + P +H Y+APE+ +
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSI 227
Query: 369 -----EEFDRSVDAYSFGLILYEM-----IEGVQ-----PFH---PKPP--EEVVKLMCC 408
E F R+ D Y+ GL+ +E+ I G+ P++ P P EE+ K++C
Sbjct: 228 NMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 286
Query: 409 EGKRP--PLKIKARSYPPDLKELIEECW 434
+ RP P + ++ + +++ ECW
Sbjct: 287 QKLRPNIPNRWQSCEALRVMAKIMRECW 314
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 27/231 (11%)
Query: 180 VPEYELNPLELQVRKADGITKGSYQVAKW----NGTKVWVKILDKE-SHKDPERINAFTH 234
+P P E++ R G G V +W G +V +K +E S K+ ER +
Sbjct: 8 LPTQTCGPWEMKERLGTG---GFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER---WCL 61
Query: 235 ELTIVEKARHPNVVQF------VGAVTQNIPMMIVLEYHAKGDLASYLQKKGR---LSPS 285
E+ I++K HPNVV + + N ++ +EY GDL YL + L
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 286 KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKA 345
+ D++ + YLHE + IIH DLKP+NI+L G Q I ++ L Y + E
Sbjct: 122 PIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLI--HKIIDLGY-AKELD 175
Query: 346 KIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHP 396
+ + Y+APE+ + +++ +VD +SFG + +E I G +PF P
Sbjct: 176 QGELCTEFVGTLQ-YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 198 ITKGSYQVAK-----WNGTKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFV 251
I GSY V K + VKI+DK S +DP T E+ I+ + +HPN++
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDK-SKRDP------TEEIEILLRYGQHPNIITLK 82
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ +V E G+L + ++ S + + + + YLH ++H
Sbjct: 83 DVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH---AQGVVH 139
Query: 312 CDLKPKNIL-LDNGG---QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYK 367
DLKP NIL +D G ++I FG + + E ++ P AN +VAPE+ +
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLMTPCY---TAN-FVAPEVLE 193
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPFHPKP---PEEVV 403
+ +D + D +S G++LY M+ G PF P PEE++
Sbjct: 194 RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 206 AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR-HPNVVQFVGAVTQNIPMMIVL 264
K G VK+L K+ + + E I+ AR HP + Q + V+
Sbjct: 44 VKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM 103
Query: 265 EYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNG 324
E+ GDL ++QK R ++ +A ++ + +LH+ II+ DLK N+LLD+
Sbjct: 104 EFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHE 160
Query: 325 GQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLIL 384
G K++ FG+ + + I F + P Y+APEI + + +VD ++ G++L
Sbjct: 161 GHCKLADFGMCK-EGICNGVTTATFCGT---PD--YIAPEILQEMLYGPAVDWWAMGVLL 214
Query: 385 YEMIEGVQPFHPKPPEEVVK 404
YEM+ G PF + +++ +
Sbjct: 215 YEMLCGHAPFEAENEDDLFE 234
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 53/287 (18%)
Query: 195 ADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGA 253
A GI+K + +V VK+L KE ER A EL ++ + H N+V +GA
Sbjct: 66 AYGISKTGVSI------QVAVKML-KEKADSSER-EALMSELKMMTQLGSHENIVNLLGA 117
Query: 254 VTQNIPMMIVLEYHAKGDLASYLQKK-----------------------GRLSPSKVLRF 290
T + P+ ++ EY GDL +YL+ K L+ +L F
Sbjct: 118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCF 177
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLR-----LQYISPEKA 345
A +A+GM +L + +H DL +N+L+ +G +KI FGL R Y+ A
Sbjct: 178 AYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNA 234
Query: 346 KIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVK 404
++ PV + P +L+ K+ D +S+G++L+E+ GV P+ P +
Sbjct: 235 RL--PVKWMAPESLFEGIYTIKS-------DVWSYGILLWEIFSLGVNPYPGIPVDANFY 285
Query: 405 LMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARL 451
+ G + A ++ +++ CW RP+F + + L
Sbjct: 286 KLIQNGFKMDQPFYA---TEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
+ +E+ ++ K +HPN+V + ++++ + G+L + +KG + R
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNIL---LDNGGQLKISGFGLLRLQYISPEKAK 346
+ + YLH+ I+H DLKP+N+L LD ++ IS FGL ++ E
Sbjct: 121 LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-----EDPG 172
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
V + P YVAPE+ + + ++VD +S G+I Y ++ G PF+
Sbjct: 173 SVLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E EL +++ A G + K+ V I + P+ E
Sbjct: 12 RILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL-QKKGRLSPSKVLRFALDLAR 296
++ P V + +G + + +V + G L ++ + +GRL +L + + +A+
Sbjct: 72 VMAGVGSPYVSRLLG-ICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAK 130
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GM+YL + + ++H DL +N+L+ + +KI+ FGL RL I + H D
Sbjct: 131 GMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE-------YHADG 180
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E F D +S+G+ ++E++ G +P+ P E+ L+ +G+R
Sbjct: 181 GKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL-EKGER 239
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+++ R+
Sbjct: 240 LP-------QPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 56 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 109
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 165
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 166 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
Query: 396 PKPPEEVV 403
+E +
Sbjct: 218 GDTKQETL 225
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 56 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 109
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 165
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 166 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
Query: 396 PKPPEEVV 403
+E +
Sbjct: 218 GDTKQETL 225
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 195 ADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
A G + VA G +V ++ ++ + E I +E+ ++ + ++PN+V ++ +
Sbjct: 32 ASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDSY 86
Query: 255 TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+ +V+EY A G L + + + ++ + + + +LH + +IH D+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHS---NQVIHRDI 142
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS 374
K NILL G +K++ FG I+PE++K S + ++APE+ + +
Sbjct: 143 KSDNILLGMDGSVKLTDFGFC--AQITPEQSK----RSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 375 VDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEG 410
VD +S G++ EMIEG P+ + P + L+ G
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 232
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
Identical Consensus Repeats
Length = 126
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 77 LFMACR-GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L +A R G ++ V+ LL G+DVN+ D +GRT LH+AA GH+EVVKLLL A+++A+D
Sbjct: 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVA 175
+ G T A G++EV +L GA V K RTP+ +A
Sbjct: 66 KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 108
Score = 68.6 bits (166), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 77 LFMACR-GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L +A R G ++ V+ LL G+DVN+ D +GRT LH+AA GH+EVVKLLL A+++A+D
Sbjct: 39 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 98
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGA 162
+ G T A G++EV +L GA
Sbjct: 99 KNGRTPLHLAARNGHLEVVKLLLEAGA 125
Score = 58.9 bits (141), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 104 DGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 163
+GRT LH+AA GH+EVVKLLL A+++A+D+ G T A G++EV +L GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 164 V---PKTKRTPMTVA 175
V K RTP+ +A
Sbjct: 61 VNAKDKNGRTPLHLA 75
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 15/230 (6%)
Query: 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALD 293
E+T++ + V ++ G+ + + I++EY G A L + G ++ +
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGS-ALDLLRAGPFDEFQIATMLKE 128
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
+ +G++YLH K IH D+K N+LL G +K++ FG+ Q + + F +
Sbjct: 129 ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAG-QLTDTQIKRNTFVGT- 183
Query: 354 IDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRP 413
++APE+ + +D D +S G+ E+ +G P P V L P
Sbjct: 184 ----PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--LFLIPKNNP 237
Query: 414 PLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQGW 463
P + + KE I+ C + P RP E++ + IV N K +
Sbjct: 238 PTLVG--DFTKSFKEFIDACLNKDPSFRPTAKELL-KHKFIVKNSKKTSY 284
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++LE A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 9/219 (4%)
Query: 216 KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL-AS 274
K++D +S E + + E+ I+ HPN+V+ + A + I++E+ A G + A
Sbjct: 41 KVIDTKSE---EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 97
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGL 334
L+ + L+ S++ +NYLH+ K IIH DLK NIL G +K++ FG+
Sbjct: 98 MLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGV 154
Query: 335 LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + + F + A V E K+ +D D +S G+ L EM E P
Sbjct: 155 SAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 214
Query: 395 HPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEEC 433
H P V L+ PP + + + K+ +++C
Sbjct: 215 HELNPMRV--LLKIAKSEPPTLAQPSRWSSNFKDFLKKC 251
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 124/298 (41%), Gaps = 40/298 (13%)
Query: 184 ELNPLELQVRK--ADGITKGSYQVAKWNGTKVWV--KILDKESHKDPERINAFTHELTIV 239
EL L L+VR+ A+G Y+ + + ++L E K+ A E+ +
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN----RAIIQEVCFM 79
Query: 240 EK-ARHPNVVQFVGAVT-------QNIPMMIVLEYHAKGDLASYLQK---KGRLSPSKVL 288
+K + HPN+VQF A + ++L KG L +L+K +G LS VL
Sbjct: 80 KKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVL 139
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP------ 342
+ R + ++H KP PIIH DLK +N+LL N G +K+ FG P
Sbjct: 140 KIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 343 EKAKIVFPVSHIDPANLYVAPEI---YKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPP 399
++ +V + +Y PEI Y N D ++ G ILY + F P
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC-----FRQHPF 253
Query: 400 EEVVKLMCCEGKR--PPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
E+ KL GK PP + + LI P R + E++ +L I
Sbjct: 254 EDGAKLRIVNGKYSIPPHDTQYTVF----HSLIRAMLQVNPEERLSIAEVVHQLQEIA 307
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 188 LELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHK-DPERINAFTHELTIVEKARHPN 246
+EL + +G Y++ K V +K+L + + K D E + E I+ + +P
Sbjct: 342 IELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEM---MREAQIMHQLDNPY 397
Query: 247 VVQFVGAVTQNIPMMIVLEYHAKGDLASYL-QKKGRLSPSKVLRFALDLARGMNYLHECK 305
+V+ +G V Q +M+V+E G L +L K+ + S V ++ GM YL E
Sbjct: 398 IVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE-- 454
Query: 306 PDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEI 365
+H +L +N+LL N KIS FGL + + + + + P Y APE
Sbjct: 455 -KNFVHRNLAARNVLLVNRHYAKISDFGLSKA--LGADDSYYTARSAGKWPLKWY-APEC 510
Query: 366 YKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR---PPLKIKARS 421
+F D +S+G+ ++E + G +P+ EV+ + +GKR PP
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRMECPP------E 563
Query: 422 YPPDLKELIEECWDPKPVIRPNFNEIIARL 451
PP+L L+ +CW K RP+F + R+
Sbjct: 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRM 593
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 178 REVPEYELNPLELQVRK-----ADGITKGSYQVAKWNGTKVWV-KILDKESHKDPERINA 231
+E+PE ++P + G ++++ + +V+ KI+ K P +
Sbjct: 2 KEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK 61
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFA 291
+ E++I H +VV F G N + +VLE + L +++ L+ + +
Sbjct: 62 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 121
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ G YLH + +IH DLK N+ L+ ++KI FGL E+ K++
Sbjct: 122 RQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 178
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGK 411
+ Y+APE+ + VD +S G I+Y ++ G KPP E L K
Sbjct: 179 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG------KPPFETSCL-----K 221
Query: 412 RPPLKIKARSYP------PDLKELIEECWDPKPVIRPNFNEII 448
L+IK Y P LI++ P RP NE++
Sbjct: 222 ETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 195 ADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
A G + VA G +V ++ ++ + E I +E+ ++ + ++PN+V ++ +
Sbjct: 32 ASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDSY 86
Query: 255 TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+ +V+EY A G L + + + ++ + + + +LH + +IH D+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHS---NQVIHRDI 142
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS 374
K NILL G +K++ FG I+PE++K S + ++APE+ + +
Sbjct: 143 KSDNILLGMDGSVKLTDFGFC--AQITPEQSK----RSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 375 VDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEG 410
VD +S G++ EMIEG P+ + P + L+ G
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 232
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 195 ADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
A G + VA G +V ++ ++ + E I +E+ ++ + ++PN+V ++ +
Sbjct: 32 ASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDSY 86
Query: 255 TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+ +V+EY A G L + + + ++ + + + +LH + +IH D+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHS---NQVIHRDI 142
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS 374
K NILL G +K++ FG I+PE++K S + ++APE+ + +
Sbjct: 143 KSDNILLGMDGSVKLTDFGFC--AQITPEQSK----RSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 375 VDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEG 410
VD +S G++ EMIEG P+ + P + L+ G
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 232
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 197 GITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ 256
G K +Y G KV +KI++K+ + E++ + RHP++++ +
Sbjct: 18 GKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 75
Query: 257 NIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
+++V+EY A +L Y+ ++ ++S + RF + + Y H K I+H DLKP
Sbjct: 76 KDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKP 131
Query: 317 KNILLDNGGQLKISGFGLLRL----QYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
+N+LLD +KI+ FGL + ++ + + LY PE
Sbjct: 132 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE-------- 183
Query: 373 RSVDAYSFGLILYEMIEGVQPF 394
VD +S G+ILY M+ PF
Sbjct: 184 --VDVWSCGVILYVMLCRRLPF 203
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 195 ADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
A G + VA G +V ++ ++ + E I +E+ ++ + ++PN+V ++ +
Sbjct: 33 ASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDSY 87
Query: 255 TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+ +V+EY A G L + + + ++ + + + +LH + +IH D+
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHS---NQVIHRDI 143
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS 374
K NILL G +K++ FG I+PE++K S + ++APE+ + +
Sbjct: 144 KSDNILLGMDGSVKLTDFGFC--AQITPEQSK----RSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 375 VDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEG 410
VD +S G++ EMIEG P+ + P + L+ G
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 233
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 35/267 (13%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
+G V VK L +E + E F E+ ++ A H N+++ G ++V Y A
Sbjct: 53 DGXLVAVKRLKEERTQGGEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMA 110
Query: 269 KGDLASYLQKKGRLSPS----KVLRFALDLARGMNYLHE-CKPDPIIHCDLKPKNILLDN 323
G +AS L+++ P K R AL ARG+ YLH+ C P IIH D+K NILLD
Sbjct: 111 NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP-KIIHRDVKAANILLDE 169
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL----YVAPEIYKNEEFDRSVDAYS 379
+ + FGL +L + + H+ A ++APE + D +
Sbjct: 170 EFEAVVGDFGLAKL---------MDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFG 220
Query: 380 FGLILYEMIEGVQPF---HPKPPEEVVKLMCCEGKRPPLKIKA--------RSYPPDLKE 428
+G++L E+I G + F ++V+ L +G K++A ++++
Sbjct: 221 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQ 280
Query: 429 LIEE---CWDPKPVIRPNFNEIIARLD 452
LI+ C P+ RP +E++ L+
Sbjct: 281 LIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 178 REVPEYELNPLELQVRK-----ADGITKGSYQVAKWNGTKVWV-KILDKESHKDPERINA 231
+E+PE ++P + G ++++ + +V+ KI+ K P +
Sbjct: 26 KEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK 85
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFA 291
+ E++I H +VV F G N + +VLE + L +++ L+ + +
Sbjct: 86 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 145
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ G YLH + +IH DLK N+ L+ ++KI FGL E+ K++
Sbjct: 146 RQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 202
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGK 411
+ Y+APE+ + VD +S G I+Y ++ G KPP E L K
Sbjct: 203 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG------KPPFETSCL-----K 245
Query: 412 RPPLKIKARSYP------PDLKELIEECWDPKPVIRPNFNEII 448
L+IK Y P LI++ P RP NE++
Sbjct: 246 ETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 14/266 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 21 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 77
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 78 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 134
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 135 NVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 191
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 192 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 247
Query: 437 KPVIRPNFNEIIARLDRIVCNCSKQG 462
RP F + RL + +G
Sbjct: 248 DVENRPGFAAVELRLRNYYYDVVNEG 273
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL-QKKGRLSPSKVLRFALD 293
E++++++ HPN+V + + + +V E+ K DL L + K L S++ +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
L RG+ + H+ + I+H DLKP+N+L+++ G LK++ FGL R I V +H
Sbjct: 128 LLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP------VRSYTH 178
Query: 354 IDPANLYVAPEI-YKNEEFDRSVDAYSFGLILYEMIEGVQPFHP--KPPEEVVKLMCCEG 410
Y AP++ ++++ SVD +S G I EMI G +P P +++ K+ G
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQLPKIFSILG 237
Query: 411 KRPPLKIKARSYPPDLKELIEECWDPKP--VIRPNF-NEIIARLDRIVC 456
P + P K+ + ++ KP I P F E I L ++C
Sbjct: 238 TPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLC 286
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL-QKKGRLSPSKVLRFALD 293
E++++++ HPN+V + + + +V E+ K DL L + K L S++ +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
L RG+ + H+ + I+H DLKP+N+L+++ G LK++ FGL R I V +H
Sbjct: 128 LLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP------VRSYTH 178
Query: 354 IDPANLYVAPEIYK-NEEFDRSVDAYSFGLILYEMIEGVQPFHP--KPPEEVVKLMCCEG 410
Y AP++ ++++ SVD +S G I EMI G +P P +++ K+ G
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQLPKIFSILG 237
Query: 411 KRPPLKIKARSYPPDLKELIEECWDPKP--VIRPNF-NEIIARLDRIVC 456
P + P K+ + ++ KP I P F E I L ++C
Sbjct: 238 TPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLC 286
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E++I+ + HPN++ ++++LE + G+L +L +K LS + F +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRLQYISPEKAKIVFP 350
G+NYLH K I H DLKP+NI+L + +K+ FGL + + K +F
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFG 180
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+VAPEI E D +S G+I Y ++ G PF +E +
Sbjct: 181 TPE------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 178 REVPEYELNPLELQVRK-----ADGITKGSYQVAKWNGTKVWV-KILDKESHKDPERINA 231
+E+PE ++P + G ++++ + +V+ KI+ K P +
Sbjct: 28 KEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK 87
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFA 291
+ E++I H +VV F G N + +VLE + L +++ L+ + +
Sbjct: 88 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 147
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ G YLH + +IH DLK N+ L+ ++KI FGL E+ K++
Sbjct: 148 RQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 204
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGK 411
+ Y+APE+ + VD +S G I+Y ++ G KPP E L K
Sbjct: 205 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG------KPPFETSCL-----K 247
Query: 412 RPPLKIKARSYP------PDLKELIEECWDPKPVIRPNFNEII 448
L+IK Y P LI++ P RP NE++
Sbjct: 248 ETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 14/266 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 33 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 89
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 90 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 146
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 203
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 204 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 259
Query: 437 KPVIRPNFNEIIARLDRIVCNCSKQG 462
RP F + RL + +G
Sbjct: 260 DVENRPGFAAVELRLRNYYYDVVNEG 285
>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure
Length = 115
Score = 73.2 bits (178), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G + V+ LL++G+DVN+ DG T LH+AA GH E+VKLLL+K A+
Sbjct: 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164
++AR + G+T AK G+ E+ +L A+GA V
Sbjct: 68 VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G + V+ LL +G+DVN+ DG T H+A GH E+VKLL +K A+
Sbjct: 41 DGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100
Query: 131 IDARDRWGST 140
++AR WGS+
Sbjct: 101 VNARS-WGSS 109
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 11/156 (7%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+L+ A G+ V+DLL G+DVN+ D DG+T LH+AA GH EVVKLLLS+ A+ +A+
Sbjct: 7 RLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAK 66
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKVPKTK----RTPMTVA---NPREVPEYELNP 187
D G T A G+ EV +L ++GA P K +TP+ +A +EV + L+
Sbjct: 67 DSDGKTPLHLAAENGHKEVVKLLLSQGAD-PNAKDSDGKTPLHLAAENGHKEVVKLLLSQ 125
Query: 188 -LELQVRKADGITKGSYQVAKWNGTKVWVKILDKES 222
+ +DG T +A+ +G + VK+L+K+
Sbjct: 126 GADPNTSDSDGRT--PLDLAREHGNEEVVKLLEKQG 159
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G + V+ LL++G+D N+ D DG+T LH+AA GH EVVKLLLS+ A+
Sbjct: 36 DGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGAD 95
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTK----RTPMTVA 175
+A+D G T A G+ EV +L ++GA P T RTP+ +A
Sbjct: 96 PNAKDSDGKTPLHLAAENGHKEVVKLLLSQGAD-PNTSDSDGRTPLDLA 143
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G + V+ LL++G+D N+ D DG+T LH+AA GH EVVKLLLS+ A+
Sbjct: 69 DGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGAD 128
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGA 162
+ D G T A+ +GN EV +L+ +G
Sbjct: 129 PNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +V VK +D + +R +E+ I+ H NVV + + +V+E+
Sbjct: 67 KHTGKQVAVKKMDL---RKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEF 123
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G L + R++ ++ L + R ++YLH +IH D+K +ILL + G+
Sbjct: 124 LEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGR 179
Query: 327 LKISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILY 385
+K+S FG ++ P++ +V ++APE+ + VD +S G+++
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKXLV-------GTPYWMAPEVISRLPYGTEVDIWSLGIMVI 232
Query: 386 EMIEGVQPFHPKPPEEVVK 404
EMI+G P+ +PP + ++
Sbjct: 233 EMIDGEPPYFNEPPLQAMR 251
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 27 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 83
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 84 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 140
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENXYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 197
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 198 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 253
Query: 437 KPVIRPNFNEIIARL 451
RP F + RL
Sbjct: 254 DVENRPGFAAVELRL 268
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 198 ITKGSYQ-----VAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFV 251
I GSY V K + VK++DK S +DP + E+ I+ + +HPN++
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDK-SKRDP------SEEIEILLRYGQHPNIITLK 87
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ +V E G+L + ++ S + + + + YLH ++H
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS---QGVVH 144
Query: 312 CDLKPKNIL-LDNGGQ---LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYK 367
DLKP NIL +D G L+I FG + + E ++ P AN +VAPE+ K
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCY---TAN-FVAPEVLK 198
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPFHPKP---PEEVV 403
+ +D D +S G++LY M+ G PF P PEE++
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 23 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 79
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 80 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 136
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 137 NVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 193
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 194 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 249
Query: 437 KPVIRPNFNEIIARL 451
RP F + RL
Sbjct: 250 DVENRPGFAAVELRL 264
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 27/226 (11%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVA-----KWNGTKVWVKILDKESHKDPERINAF 232
++ P Y+ L+L K + +GS+ + K + VKI+ K + ++
Sbjct: 2 KDSPFYQHYDLDL---KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---- 54
Query: 233 THELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFA 291
E+T ++ HPN+V+ + +V+E G+L ++KK S ++
Sbjct: 55 --EITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIM 112
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILL---DNGGQLKISGFGLLRLQYISPEKAKIV 348
L ++++H+ ++H DLKP+N+L ++ ++KI FG RL+ P+ +
Sbjct: 113 RKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK--PPDNQPLK 167
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
P + Y APE+ +D S D +S G+ILY M+ G PF
Sbjct: 168 TPCFTLH----YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 198 ITKGSYQ-----VAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFV 251
I GSY V K + VK++DK S +DP + E+ I+ + +HPN++
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDK-SKRDP------SEEIEILLRYGQHPNIITLK 87
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ +V E G+L + ++ S + + + + YLH ++H
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS---QGVVH 144
Query: 312 CDLKPKNIL-LDNGGQ---LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYK 367
DLKP NIL +D G L+I FG + + E ++ P AN +VAPE+ K
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCY---TAN-FVAPEVLK 198
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPFHPKP---PEEVV 403
+ +D D +S G++LY M+ G PF P PEE++
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 27 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 83
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 84 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 140
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 197
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 198 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 253
Query: 437 KPVIRPNFNEIIARL 451
RP F + RL
Sbjct: 254 DVENRPGFAAVELRL 268
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G + VK++ K K + E+ ++++ HPN+++ +V E
Sbjct: 71 KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEV 130
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDN--- 323
+ G+L + + R S R + G+ Y+H+ K I+H DLKP+N+LL++
Sbjct: 131 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSK 187
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
++I FG L + + +K K ++ Y+APE+ +D D +S G+I
Sbjct: 188 DANIRIIDFG-LSTHFEASKKMKDKIGTAY------YIAPEVLHG-TYDEKCDVWSTGVI 239
Query: 384 LYEMIEGVQPFHPKPPEEVVK 404
LY ++ G PF+ +++K
Sbjct: 240 LYILLSGCPPFNGANEYDILK 260
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G + VK++ K K + E+ ++++ HPN+++ +V E
Sbjct: 72 KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEV 131
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDN--- 323
+ G+L + + R S R + G+ Y+H+ K I+H DLKP+N+LL++
Sbjct: 132 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSK 188
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
++I FG L + + +K K ++ Y+APE+ +D D +S G+I
Sbjct: 189 DANIRIIDFG-LSTHFEASKKMKDKIGTAY------YIAPEVLHG-TYDEKCDVWSTGVI 240
Query: 384 LYEMIEGVQPFHPKPPEEVVK 404
LY ++ G PF+ +++K
Sbjct: 241 LYILLSGCPPFNGANEYDILK 261
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM 260
G +W G + VK+L K + F E + HPNV+ +GA Q+ P
Sbjct: 24 GELWKGRWQGNDIVVKVL-KVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC-QSPPA 81
Query: 261 ---MIVLEYHAKGDLASYLQKKGR--LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLK 315
++ + G L + L + + S+ ++FALD ARG +LH +P H L
Sbjct: 82 PHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LN 140
Query: 316 PKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD--- 372
+++ +D +IS ++ + SP + A +VAPE + + D
Sbjct: 141 SRSVXIDEDXTARISX-ADVKFSFQSPGRXY----------APAWVAPEALQKKPEDTNR 189
Query: 373 RSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEE 432
RS D +SF ++L+E++ PF E+ + EG RP + P + +L +
Sbjct: 190 RSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTI---PPGISPHVSKLXKI 246
Query: 433 CWDPKPVIRPNFNEIIARLDR 453
C + P RP F+ I+ L++
Sbjct: 247 CXNEDPAKRPKFDXIVPILEK 267
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 178 REVPEYELNPLELQVRK-----ADGITKGSYQVAKWNGTKVWV-KILDKESHKDPERINA 231
+E+PE ++P + G ++++ + +V+ KI+ K P +
Sbjct: 4 KEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK 63
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFA 291
+ E++I H +VV F G N + +VLE + L +++ L+ + +
Sbjct: 64 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 123
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ G YLH + +IH DLK N+ L+ ++KI FGL E+ K +
Sbjct: 124 RQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGK 411
+ Y+APE+ + VD +S G I+Y ++ G KPP E L K
Sbjct: 181 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG------KPPFETSCL-----K 223
Query: 412 RPPLKIKARSYP------PDLKELIEECWDPKPVIRPNFNEII 448
L+IK Y P LI++ P RP NE++
Sbjct: 224 ETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 41 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 97
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 98 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 154
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 155 NVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 211
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 212 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 267
Query: 437 KPVIRPNFNEIIARL 451
RP F + RL
Sbjct: 268 DVENRPGFAAVELRL 282
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 178 REVPEYELNPLELQVRK-----ADGITKGSYQVAKWNGTKVWV-KILDKESHKDPERINA 231
+E+PE ++P + G ++++ + +V+ KI+ K P +
Sbjct: 8 KEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK 67
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFA 291
+ E++I H +VV F G N + +VLE + L +++ L+ + +
Sbjct: 68 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 127
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ G YLH + +IH DLK N+ L+ ++KI FGL E+ K +
Sbjct: 128 RQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 184
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGK 411
+ Y+APE+ + VD +S G I+Y ++ G KPP E L K
Sbjct: 185 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG------KPPFETSCL-----K 227
Query: 412 RPPLKIKARSYP------PDLKELIEECWDPKPVIRPNFNEII 448
L+IK Y P LI++ P RP NE++
Sbjct: 228 ETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 43 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 99
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 100 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 156
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 213
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 214 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 269
Query: 437 KPVIRPNFNEIIARL 451
RP F + RL
Sbjct: 270 DVENRPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 43 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 99
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 100 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 156
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 213
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 214 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 269
Query: 437 KPVIRPNFNEIIARL 451
RP F + RL
Sbjct: 270 DVENRPGFAAVELRL 284
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G + VK++ K K + E+ ++++ HPN+++ +V E
Sbjct: 48 KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEV 107
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDN--- 323
+ G+L + + R S R + G+ Y+H+ K I+H DLKP+N+LL++
Sbjct: 108 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSK 164
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
++I FG L + + +K K ++ Y+APE+ +D D +S G+I
Sbjct: 165 DANIRIIDFG-LSTHFEASKKMKDKIGTAY------YIAPEVLHG-TYDEKCDVWSTGVI 216
Query: 384 LYEMIEGVQPFHPKPPEEVVK 404
LY ++ G PF+ +++K
Sbjct: 217 LYILLSGCPPFNGANEYDILK 237
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I+ + RHPN++ ++++LE + G+L +L +K L+ + +F +
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRLQYISPEKAKIVFP 350
G++YLH + I H DLKP+NI+L + ++K+ FG+ + + + K +F
Sbjct: 118 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH-KIEAGNEFKNIFG 173
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+VAPEI E D +S G+I Y ++ G PF + +E +
Sbjct: 174 TPE------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 220
>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|E Chain E, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|F Chain F, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
Length = 154
Score = 72.0 bits (175), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN++D +G T LH+AA GH+E+V++LL A+++A+D
Sbjct: 39 LHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKD 98
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKV 164
G T A Y+G++E+ +L GA V
Sbjct: 99 ATGITPLYLAAYWGHLEIVEVLLKHGADV 127
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+D N+ D GRT LH+AA GH+E+V++LL A+
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGAD 60
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMT 173
++A D G+T A G++E+ +L GA V T +T
Sbjct: 61 VNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGIT 103
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 56/90 (62%)
Query: 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKK 128
+ + T L A G ++ VE LL G+DVN+ D G T L++AA GH+E+V++LL
Sbjct: 65 DTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHG 124
Query: 129 ANIDARDRWGSTAAADAKYYGNVEVYNILK 158
A+++A+D++G TA + GN ++ IL+
Sbjct: 125 ADVNAQDKFGKTAFDISIDIGNEDLAEILQ 154
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 178 REVPEYELNPLELQVRK-----ADGITKGSYQVAKWNGTKVWV-KILDKESHKDPERINA 231
+E+PE ++P + G ++++ + +V+ KI+ K P +
Sbjct: 4 KEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK 63
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFA 291
+ E++I H +VV F G N + +VLE + L +++ L+ + +
Sbjct: 64 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL 123
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ G YLH + +IH DLK N+ L+ ++KI FGL E+ K +
Sbjct: 124 RQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGK 411
+ Y+APE+ + VD +S G I+Y ++ G KPP E L K
Sbjct: 181 PN------YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG------KPPFETSCL-----K 223
Query: 412 RPPLKIKARSYP------PDLKELIEECWDPKPVIRPNFNEII 448
L+IK Y P LI++ P RP NE++
Sbjct: 224 ETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 182 EYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK 241
+YEL E+ A + + +Y K KV +K ++ E K ++ E+ + +
Sbjct: 11 DYELQ--EVIGSGATAVVQAAYCAPK--KEKVAIKRINLE--KCQTSMDELLKEIQAMSQ 64
Query: 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ--------KKGRLSPSKVLRFALD 293
HPN+V + + + +V++ + G + ++ K G L S + +
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY----ISPEKAKIVF 349
+ G+ YLH+ + IH D+K NILL G ++I+ FG+ I+ K + F
Sbjct: 125 VLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 350 PVSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCC 408
+ ++APE+ + +D D +SFG+ E+ G P+H PP +V+ ++
Sbjct: 182 VGT-----PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTL 235
Query: 409 EGKRPPLKIKA------RSYPPDLKELIEECWDPKPVIRPNFNEII 448
+ P L+ + Y +++I C P RP E++
Sbjct: 236 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I+ + RHPN++ ++++LE + G+L +L +K L+ + +F +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRLQYISPEKAKIVFP 350
G++YLH + I H DLKP+NI+L + ++K+ FG+ + + + K +F
Sbjct: 125 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH-KIEAGNEFKNIFG 180
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+VAPEI E D +S G+I Y ++ G PF + +E +
Sbjct: 181 TPE------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 227
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I+ + RHPN++ ++++LE + G+L +L +K L+ + +F +
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRLQYISPEKAKIVFP 350
G++YLH + I H DLKP+NI+L + ++K+ FG+ + + + K +F
Sbjct: 139 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH-KIEAGNEFKNIFG 194
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+VAPEI E D +S G+I Y ++ G PF + +E +
Sbjct: 195 TPE------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 241
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 117/257 (45%), Gaps = 22/257 (8%)
Query: 198 ITKGSY-----QVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
+ +GSY + K G V +K + ES + E++I+++ P+VV++ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYG 91
Query: 253 AVTQNIPMMIVLEYHAKGDLASYLQKKGR-LSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ +N + IV+EY G ++ ++ + + L+ ++ +G+ YLH + IH
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IH 148
Query: 312 CDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEF 371
D+K NILL+ G K++ FG ++ + + + + ++APE+ + +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFG------VAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 372 DRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIE 431
+ D +S G+ EM EG P+ P + ++ PP K + + + ++
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT--NPPPTFRKPELWSDNFTDFVK 260
Query: 432 ECWDPKPVIRPNFNEII 448
+C P R +++
Sbjct: 261 QCLVKSPEQRATATQLL 277
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 239 VEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FA 291
+E HPNVV+ T + + +V E H DL +YL K P++ ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
L RG+++LH + ++H DLKP+NIL+ + GQ+K++ FGL R+ +V +
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
Y APE+ + VD +S G I EM
Sbjct: 184 -------WYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 385 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 441
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 442 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 498
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 499 NVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 555
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 556 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 611
Query: 437 KPVIRPNFNEIIARL 451
RP F + RL
Sbjct: 612 DVENRPGFAAVELRL 626
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 182 EYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK 241
+YEL E+ A + + +Y K KV +K ++ E K ++ E+ + +
Sbjct: 16 DYELQ--EVIGSGATAVVQAAYCAPK--KEKVAIKRINLE--KCQTSMDELLKEIQAMSQ 69
Query: 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ--------KKGRLSPSKVLRFALD 293
HPN+V + + + +V++ + G + ++ K G L S + +
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY----ISPEKAKIVF 349
+ G+ YLH+ + IH D+K NILL G ++I+ FG+ I+ K + F
Sbjct: 130 VLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 350 PVSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCC 408
+ ++APE+ + +D D +SFG+ E+ G P+H PP +V+ ++
Sbjct: 187 VGT-----PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTL 240
Query: 409 EGKRPPLKIKA------RSYPPDLKELIEECWDPKPVIRPNFNEII 448
+ P L+ + Y +++I C P RP E++
Sbjct: 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257
+ KG YQ+ K T VKIL E++ DP + E ++++ +P +V+ +G + +
Sbjct: 386 VKKGYYQMKKVVKTVA-VKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIG-ICEA 442
Query: 258 IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
M+V+E G L YLQ+ + ++ ++ GM YL E +H DL +
Sbjct: 443 ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 499
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
N+LL KIS FGL + K +H + APE +F D
Sbjct: 500 NVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYYKFSSKSDV 556
Query: 378 YSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
+SFG++++E G +P+ EV M +G+R P ++ +L+ CW
Sbjct: 557 WSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGC---PREMYDLMNLCWTY 612
Query: 437 KPVIRPNFNEIIARL 451
RP F + RL
Sbjct: 613 DVENRPGFAAVELRL 627
>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex)
Length = 169
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN+ID+ G T LH+AA GH+E+V++LL A+++A D
Sbjct: 51 LHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVD 110
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKV 164
WG T A G++E+ +L GA V
Sbjct: 111 TWGDTPLHLAAIMGHLEIVEVLLKHGADV 139
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+LL A G V L+ G+DVN+ D G T LH+AA GH+E+V++LL A+++A
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAI 76
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKR---TPMTVA---NPREVPEYELNPL 188
D GST A G++E+ +L GA V TP+ +A E+ E L
Sbjct: 77 DIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKH- 135
Query: 189 ELQVRKADGITKGSYQVAKWNGTKVWVKILDK 220
V D K ++ ++ NG + +IL K
Sbjct: 136 GADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 239 VEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FA 291
+E HPNVV+ T + + +V E H DL +YL K P++ ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
L RG+++LH + ++H DLKP+NIL+ + GQ+K++ FGL R+ +V +
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
Y APE+ + VD +S G I EM
Sbjct: 184 -------WYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 198 ITKGSYQVAK-----WNGTKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFV 251
I GSY V K + VKI+DK S +DP T E+ I+ + +HPN++
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDK-SKRDP------TEEIEILLRYGQHPNIITLK 82
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
+ +V E G+L + ++ S + + + + YLH ++H
Sbjct: 83 DVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH---AQGVVH 139
Query: 312 CDLKPKNIL-LDNGG---QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYK 367
DLKP NIL +D G ++I FG + + E + P AN +VAPE+ +
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLXTPCY---TAN-FVAPEVLE 193
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPFHPKP---PEEVV 403
+ +D + D +S G++LY + G PF P PEE++
Sbjct: 194 RQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEIL 232
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 195 ADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
A G + VA G +V ++ ++ + E I +E+ ++ + ++PN+V ++ +
Sbjct: 33 ASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDSY 87
Query: 255 TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+ +V+EY A G L + + + ++ + + + +LH + +IH ++
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHS---NQVIHRNI 143
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS 374
K NILL G +K++ FG I+PE++K S + ++APE+ + +
Sbjct: 144 KSDNILLGMDGSVKLTDFGFC--AQITPEQSK----RSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 375 VDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEG 410
VD +S G++ EMIEG P+ + P + L+ G
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG 233
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 239 VEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FA 291
+E HPNVV+ T + + +V E H DL +YL K P++ ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
L RG+++LH + ++H DLKP+NIL+ + GQ+K++ FGL R+ +V +
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
Y APE+ + VD +S G I EM
Sbjct: 184 -------WYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G + VK++ K K + E+ ++++ HPN+++ +V E
Sbjct: 54 KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEV 113
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
+ G+L + + R S R + G+ Y+H+ K I+H DLKP+N+LL++ +
Sbjct: 114 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSK 170
Query: 327 ---LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
++I FG L + + +K K ++ Y+APE+ +D D +S G+I
Sbjct: 171 DANIRIIDFG-LSTHFEASKKMKDKIGTAY------YIAPEVLHG-TYDEKCDVWSTGVI 222
Query: 384 LYEMIEGVQPFHPKPPEEVVK 404
LY ++ G PF+ +++K
Sbjct: 223 LYILLSGCPPFNGANEYDILK 243
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 32/291 (10%)
Query: 175 ANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTH 234
A R + E EL +++ A G V + K+ V I P+ F
Sbjct: 7 AQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD 66
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALD 293
E I+ HP++V+ +G V + + +V + G L Y+ + K + +L + +
Sbjct: 67 EALIMASMDHPHLVRLLG-VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ 125
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL-----QYISPEKAKIV 348
+A+GM YL E + ++H DL +N+L+ + +KI+ FGL RL + + + K+
Sbjct: 126 IAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM- 181
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMC 407
P+ ++A E +F D +S+G+ ++E++ G +P+ P E+ L+
Sbjct: 182 -PIK-------WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL- 232
Query: 408 CEGKRPPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+G+R P PP D+ ++ +CW RP F E+ A R+
Sbjct: 233 EKGERLP-------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 24/248 (9%)
Query: 209 NGTKVWVKILDKESHKDP-ERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYH 267
+G + +K ++K+ + P E+I A E+ +++ HPN+++ M IV+E
Sbjct: 46 SGLERVIKTINKDRSQVPMEQIEA---EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102
Query: 268 AKGDLASYL---QKKGR-LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDN 323
G+L + Q +G+ LS V + + Y H ++H DLKP+NIL +
Sbjct: 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQD 159
Query: 324 G---GQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSF 380
+KI FGL L + S E + ++ LY+APE++K + D +S
Sbjct: 160 TSPHSPIKIIDFGLAEL-FKSDEHS------TNAAGTALYMAPEVFKR-DVTFKCDIWSA 211
Query: 381 GLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVI 440
G+++Y ++ G PF EEV + K P ++ R P +L+++ P
Sbjct: 212 GVVMYFLLTGCLPFTGTSLEEVQQKATY--KEPNYAVECRPLTPQAVDLLKQMLTKDPER 269
Query: 441 RPNFNEII 448
RP+ +++
Sbjct: 270 RPSAAQVL 277
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 32/291 (10%)
Query: 175 ANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTH 234
A R + E EL +++ A G V + K+ V I P+ F
Sbjct: 30 AQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD 89
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALD 293
E I+ HP++V+ +G V + + +V + G L Y+ + K + +L + +
Sbjct: 90 EALIMASMDHPHLVRLLG-VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ 148
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRL-----QYISPEKAKIV 348
+A+GM YL E + ++H DL +N+L+ + +KI+ FGL RL + + + K+
Sbjct: 149 IAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM- 204
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMC 407
P+ ++A E +F D +S+G+ ++E++ G +P+ P E+ L+
Sbjct: 205 -PIK-------WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL- 255
Query: 408 CEGKRPPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+G+R P PP D+ ++ +CW RP F E+ A R+
Sbjct: 256 EKGERLP-------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 13/157 (8%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+L+ A G+ V+DLL G+D N+ D DGRT LH AA GH E+VKLLLSK A+ +A+
Sbjct: 7 RLIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAK 66
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKVPKTK----RTPMTVANPREVPEYELNPLEL 190
D G T A G+ E+ +L ++GA P K RTP+ A E E+ L L
Sbjct: 67 DSDGRTPLHYAAENGHKEIVKLLLSKGAD-PNAKDSDGRTPLHYA--AENGHKEIVKL-L 122
Query: 191 QVRKADGITKGS-----YQVAKWNGTKVWVKILDKES 222
+ AD T S +A+ +G + VK+L+K+
Sbjct: 123 LSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQG 159
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L + A G + V+ LL++G+D N+ D DGRT LH AA GH E+VKLLLSK A+
Sbjct: 36 DGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGAD 95
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTK----RTPMTVA 175
+A+D G T A G+ E+ +L ++GA P T RTP+ +A
Sbjct: 96 PNAKDSDGRTPLHYAAENGHKEIVKLLLSKGAD-PNTSDSDGRTPLDLA 143
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L + A G + V+ LL++G+D N+ D DGRT LH AA GH E+VKLLLSK A+
Sbjct: 69 DGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGAD 128
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGA 162
+ D G T A+ +GN E+ +L+ +G
Sbjct: 129 PNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160
>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin
pdb|4DRX|F Chain F, Gtp-Tubulin In Complex With A Darpin
Length = 169
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN+ID+ G T LH+AA GH+E+V++LL A+++A D
Sbjct: 51 LHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVD 110
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKV 164
WG T A G++E+ +L GA V
Sbjct: 111 TWGDTPLHLAAIMGHLEIVEVLLKHGADV 139
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+LL A G V L+ G+DVN+ D G T LH+AA GH+E+V++LL A+++A
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAI 76
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKR---TPMTVA---NPREVPEYELNPL 188
D GST A G++E+ +L GA V TP+ +A E+ E L
Sbjct: 77 DIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKH- 135
Query: 189 ELQVRKADGITKGSYQVAKWNGTKVWVKILDK 220
V D K ++ ++ NG + +IL K
Sbjct: 136 GADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR 281
S +D ER E++I+++ +HPNV+ ++++ E A G+L +L +K
Sbjct: 57 SREDIER------EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES 110
Query: 282 LSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRL 337
L+ + F + G+ YLH + I H DLKP+NI+L + ++KI FGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH- 166
Query: 338 QYISPEKAKIVF--PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
KI F +I +VAPEI E D +S G+I Y ++ G PF
Sbjct: 167 --------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 396 PKPPEEVV 403
+E +
Sbjct: 219 GDTKQETL 226
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 192 VRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARH-PNVVQF 250
VRK G G K V+ H ER ++E R P +V
Sbjct: 73 VRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER--------QVLEHIRQSPFLVTL 124
Query: 251 VGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPII 310
A + ++L+Y G+L ++L ++ R + +V + ++ + +LH+ II
Sbjct: 125 HYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GII 181
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE 370
+ D+K +NILLD+ G + ++ FGL + ++++ E + I+ Y+AP+I + +
Sbjct: 182 YRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFCGTIE----YMAPDIVRGGD 236
Query: 371 --FDRSVDAYSFGLILYEMIEGVQPF 394
D++VD +S G+++YE++ G PF
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G ++ VE LL G+DVN+ D DG T LH+AA EGH+E+V++LL A+
Sbjct: 34 DGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 93
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVA 175
++A+D+ G T A G++E+ +L GA V K +TP +A
Sbjct: 94 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLA 141
Score = 67.0 bits (162), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D DG T LH+AA EGH+E+V++LL A+
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 60
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVANPR---EVPEYE 184
++A+D+ G T A G++E+ +L GA V K TP+ +A E+ E
Sbjct: 61 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVL 120
Query: 185 LNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKES 222
L V D K + +A NG + ++L K +
Sbjct: 121 LKA-GADVNAQDKFGKTPFDLAIDNGNEDIAEVLQKAA 157
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 52/293 (17%)
Query: 180 VPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIV 239
VP L LE++ R G + + + K++ + DK+S + ER E+
Sbjct: 12 VPRGSLQLLEIKARGRFGCVWKAQLMNDFVAVKIF-PLQDKQSWQS-ER------EIFST 63
Query: 240 EKARHPNVVQFVGAVTQN----IPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLA 295
+H N++QF+ A + + + ++ +H KG L YL K ++ +++ A ++
Sbjct: 64 PGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL-KGNIITWNELCHVAETMS 122
Query: 296 RGMNYLHE----CKPD----PIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKI 347
RG++YLHE C+ + I H D K KN+LL + ++ FGL + E K
Sbjct: 123 RGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGL----AVRFEPGKP 178
Query: 348 VFPVSHIDPANLYVAPEI------YKNEEFDRSVDAYSFGLILYEMI-----------EG 390
Y+APE+ ++ + F R +D Y+ GL+L+E++ E
Sbjct: 179 PGDTHGQVGTRRYMAPEVLEGAINFQRDAFLR-IDMYAMGLVLWELVSRCKAADGPVDEY 237
Query: 391 VQPF------HPKPPEEVVKLMCCEGKRPPLKIKARSYP--PDLKELIEECWD 435
+ PF HP EE+ +++ + RP +K +P L IEECWD
Sbjct: 238 MLPFEEEIGQHPS-LEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWD 289
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL------QKKGRLSPS 285
F E I+ A P VVQ A + + +V+EY GDL + + +K R +
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 175
Query: 286 KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKA 345
+V+ ALD M + IH D+KP N+LLD G LK++ FG + K
Sbjct: 176 EVV-LALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTC----MKMNKE 221
Query: 346 KIVFPVSHIDPANLYVAPEIYKNEEFD----RSVDAYSFGLILYEMIEGVQPFH 395
+V + + + Y++PE+ K++ D R D +S G+ LYEM+ G PF+
Sbjct: 222 GMVRCDTAVGTPD-YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL------QKKGRLSPS 285
F E I+ A P VVQ A + + +V+EY GDL + + +K R +
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 180
Query: 286 KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKA 345
+V+ ALD M + IH D+KP N+LLD G LK++ FG + K
Sbjct: 181 EVV-LALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTC----MKMNKE 226
Query: 346 KIVFPVSHIDPANLYVAPEIYKNEEFD----RSVDAYSFGLILYEMIEGVQPFH 395
+V + + + Y++PE+ K++ D R D +S G+ LYEM+ G PF+
Sbjct: 227 GMVRCDTAVGTPD-YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G ++ VE LL G+DVN+ D DG T LH+AA EGH+E+V++LL A+
Sbjct: 34 DGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 93
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVA 175
++A+D+ G T A G++E+ +L GA V K +TP +A
Sbjct: 94 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLA 141
Score = 65.9 bits (159), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D DG T LH+AA EGH+E+V++LL A+
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 60
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVA 175
++A+D+ G T A G++E+ +L GA V K TP+ +A
Sbjct: 61 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLA 108
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 55/88 (62%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G ++ VE LL G+DVN+ D DG T LH+AA EGH+E+V++LL A+
Sbjct: 67 DGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 126
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILK 158
++A+D++G T A G+ ++ +L+
Sbjct: 127 VNAQDKFGKTPFDLAIREGHEDIAEVLQ 154
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G + VK++ K K + E+ ++++ HPN+ + +V E
Sbjct: 48 KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEV 107
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDN--- 323
+ G+L + + R S R + G+ Y H+ K I+H DLKP+N+LL++
Sbjct: 108 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK---IVHRDLKPENLLLESKSK 164
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
++I FG L + + +K K ++ Y+APE+ +D D +S G+I
Sbjct: 165 DANIRIIDFG-LSTHFEASKKXKDKIGTAY------YIAPEVLHG-TYDEKCDVWSTGVI 216
Query: 384 LYEMIEGVQPFHPKPPEEVVK 404
LY ++ G PF+ +++K
Sbjct: 217 LYILLSGCPPFNGANEYDILK 237
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL------QKKGRLSPS 285
F E I+ A P VVQ A + + +V+EY GDL + + +K R +
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 180
Query: 286 KVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKA 345
+V+ ALD M + IH D+KP N+LLD G LK++ FG + K
Sbjct: 181 EVV-LALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTC----MKMNKE 226
Query: 346 KIVFPVSHIDPANLYVAPEIYKNEEFD----RSVDAYSFGLILYEMIEGVQPFH 395
+V + + + Y++PE+ K++ D R D +S G+ LYEM+ G PF+
Sbjct: 227 GMVRCDTAVGTPD-YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G + +KI+ K S A E+ ++++ HPN+++ +V+E
Sbjct: 26 KLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEV 85
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
+ G+L + + + S + G YLH+ I+H DLKP+N+LL++ +
Sbjct: 86 YRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSR 142
Query: 327 ---LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
+KI FG L + K K ++ Y+APE+ + +++D D +S G+I
Sbjct: 143 DALIKIVDFG-LSAHFEVGGKMKERLGTAY------YIAPEVLR-KKYDEKCDVWSCGVI 194
Query: 384 LYEMIEGVQPFHPKPPEEVVK 404
LY ++ G PF + +E++K
Sbjct: 195 LYILLCGYPPFGGQTDQEILK 215
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 126/310 (40%), Gaps = 37/310 (11%)
Query: 157 LKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKG----------SYQVA 206
L + A + K P +P+ P E+ + + R +G Y++
Sbjct: 3 LGSMSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEIT 62
Query: 207 KWNGTKVWV-KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLE 265
+ +V+ K++ K P + + E+ I + +P+VV F G + + +VLE
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 266 YHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
+ L +++ ++ + F +G+ YLH + +IH DLK N+ L++
Sbjct: 123 ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDM 179
Query: 326 QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILY 385
+KI FGL E+ K + + Y+APE+ + VD +S G ILY
Sbjct: 180 DVKIGDFGLATKIEFDGERKKTLCGTPN------YIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 386 EMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP------PDLKELIEECWDPKPV 439
++ G KPP E L K ++IK Y P LI P
Sbjct: 234 TLLVG------KPPFETSCL-----KETYIRIKKNEYSVPRHINPVASALIRRMLHADPT 282
Query: 440 IRPNFNEIIA 449
+RP+ E++
Sbjct: 283 LRPSVAELLT 292
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 235 ELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALD 293
E+ I+ K HPN++Q N +V + KG+L YL +K LS + +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
L + LH+ I+H DLKP+NILLD+ +K++ FG Q EK + V
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFG-FSCQLDPGEKLRSVCGT-- 186
Query: 354 IDPANLYVAPEIYK------NEEFDRSVDAYSFGLILYEMIEGVQPF 394
P+ Y+APEI + + + + VD +S G+I+Y ++ G PF
Sbjct: 187 --PS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E++I+ + H NV+ ++++LE + G+L +L +K LS + F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRLQYISPEKAKIVFP 350
G+NYLH K I H DLKP+NI+L + +K+ FGL + + K +F
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFG 180
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+VAPEI E D +S G+I Y ++ G PF +E +
Sbjct: 181 TPE------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 191 QVRKADGITKGSY-QVAKWNGTKVWVKILDKESHKDPERINAFT--HELTIVEKARHPNV 247
Q ++ + + G+Y V K V + KE D E T E++++++ +H N+
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI 65
Query: 248 VQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKG------RLSPSKVLRFALDLARGMNYL 301
V+ + + +V E+ DL Y+ + L + V F L +G+ +
Sbjct: 66 VRLYDVIHTENKLTLVFEF-MDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 302 HECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL-- 359
HE K I+H DLKP+N+L++ GQLK+ FGL R PV+ +
Sbjct: 125 HENK---ILHRDLKPQNLLINKRGQLKLGDFGLAR---------AFGIPVNTFSSEVVTL 172
Query: 360 -YVAPEI-YKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM 406
Y AP++ + + S+D +S G IL EMI G F EE +KL+
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E++I+ + H NV+ ++++LE + G+L +L +K LS + F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRLQYISPEKAKIVFP 350
G+NYLH K I H DLKP+NI+L + +K+ FGL + + K +F
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFG 180
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+VAPEI E D +S G+I Y ++ G PF +E +
Sbjct: 181 TPE------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G + +KI+ K S A E+ ++++ HPN+++ +V+E
Sbjct: 43 KLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEV 102
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
+ G+L + + + S + G YLH+ I+H DLKP+N+LL++ +
Sbjct: 103 YRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSR 159
Query: 327 ---LKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
+KI FG L + K K ++ Y+APE+ + +++D D +S G+I
Sbjct: 160 DALIKIVDFG-LSAHFEVGGKMKERLGTAY------YIAPEVLR-KKYDEKCDVWSCGVI 211
Query: 384 LYEMIEGVQPFHPKPPEEVVK 404
LY ++ G PF + +E++K
Sbjct: 212 LYILLCGYPPFGGQTDQEILK 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 126/310 (40%), Gaps = 37/310 (11%)
Query: 157 LKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKG----------SYQVA 206
L + A + K P +P+ P E+ + + R +G Y++
Sbjct: 3 LGSMSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEIT 62
Query: 207 KWNGTKVWV-KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLE 265
+ +V+ K++ K P + + E+ I + +P+VV F G + + +VLE
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 266 YHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
+ L +++ ++ + F +G+ YLH + +IH DLK N+ L++
Sbjct: 123 ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDM 179
Query: 326 QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILY 385
+KI FGL E+ K + + Y+APE+ + VD +S G ILY
Sbjct: 180 DVKIGDFGLATKIEFDGERKKXLCGTPN------YIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 386 EMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP------PDLKELIEECWDPKPV 439
++ G KPP E L K ++IK Y P LI P
Sbjct: 234 TLLVG------KPPFETSCL-----KETYIRIKKNEYSVPRHINPVASALIRRMLHADPT 282
Query: 440 IRPNFNEIIA 449
+RP+ E++
Sbjct: 283 LRPSVAELLT 292
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 235 ELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALD 293
E+ I+ K HPN++Q N +V + KG+L YL +K LS + +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
L + LH+ I+H DLKP+NILLD+ +K++ FG Q EK + V
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFG-FSCQLDPGEKLREVCGT-- 186
Query: 354 IDPANLYVAPEIYK------NEEFDRSVDAYSFGLILYEMIEGVQPF 394
P+ Y+APEI + + + + VD +S G+I+Y ++ G PF
Sbjct: 187 --PS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 235 ELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALD 293
E+ I+ K HPN++Q N +V + KG+L YL +K LS + +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
L + LH+ I+H DLKP+NILLD+ +K++ FG Q EK + V
Sbjct: 120 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFG-FSCQLDPGEKLREVCGT-- 173
Query: 354 IDPANLYVAPEIYK------NEEFDRSVDAYSFGLILYEMIEGVQPF 394
P+ Y+APEI + + + + VD +S G+I+Y ++ G PF
Sbjct: 174 --PS--YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E++I+ + H NV+ ++++LE + G+L +L +K LS + F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRLQYISPEKAKIVFP 350
G+NYLH K I H DLKP+NI+L + +K+ FGL + + K +F
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFG 180
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+VAPEI E D +S G+I Y ++ G PF +E +
Sbjct: 181 TPE------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 19/244 (7%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K +G +V VK++D + +R +E+ I+ +H NVV+ + + +++E+
Sbjct: 67 KHSGRQVAVKMMDL---RKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G L + + RL+ ++ + + + YLH +IH D+K +ILL G+
Sbjct: 124 LQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGR 179
Query: 327 LKISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILY 385
+K+S FG ++ P++ +V ++APE+ + VD +S G+++
Sbjct: 180 VKLSDFGFCAQISKDVPKRKXLV-------GTPYWMAPEVISRSLYATEVDIWSLGIMVI 232
Query: 386 EMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIK-ARSYPPDLKELIEECWDPKPVIRPNF 444
EM++G P+ P + +K + PP K+K + P L++ +E P R
Sbjct: 233 EMVDGEPPYFSDSPVQAMKRL---RDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATA 289
Query: 445 NEII 448
E++
Sbjct: 290 QELL 293
>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex
Length = 169
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+LL A G V L+ G+DVN+ D G+T LH+AA +GH+E+V++LL A+++A
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAA 76
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKR---TPMTV---ANPREVPEYELNPL 188
D+ G T A YG++E+ +L GA V T TP+ + A E+ E L
Sbjct: 77 DKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLL-KY 135
Query: 189 ELQVRKADGITKGSYQVAKWNGTKVWVKILDK 220
V D K ++ ++ NG + +IL K
Sbjct: 136 GADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E++I+ + H NV+ ++++LE + G+L +L +K LS + F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRLQYISPEKAKIVFP 350
G+NYLH K I H DLKP+NI+L + +K+ FGL + + K +F
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFG 180
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+VAPEI E D +S G+I Y ++ G PF +E +
Sbjct: 181 TPE------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E++I+ + H NV+ ++++LE + G+L +L +K LS + F +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGG----QLKISGFGLLRLQYISPEKAKIVFP 350
G+NYLH K I H DLKP+NI+L + +K+ FGL + + K +F
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFG 180
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV 403
+VAPEI E D +S G+I Y ++ G PF +E +
Sbjct: 181 TPE------FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ 277
L+KE P + E++I+++ +H N+V+ + +++V E H DL L
Sbjct: 36 LEKEDEGIP---STTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE-HLDQDLKKLLD 91
Query: 278 K-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLR 336
+G L F L L G+ Y H+ + ++H DLKP+N+L++ G+LKI+ FGL R
Sbjct: 92 VCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
Query: 337 LQYISPEKAKIVFPVSHIDPANLYVAPEI-YKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
I K +H Y AP++ ++++ ++D +S G I EM+ G P
Sbjct: 149 AFGIPVRK------YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT-PLF 201
Query: 396 PKPPE 400
P E
Sbjct: 202 PGVSE 206
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 126/310 (40%), Gaps = 37/310 (11%)
Query: 157 LKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKG----------SYQVA 206
L + A + K P +P+ P E+ + + R +G Y++
Sbjct: 3 LGSMSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEIT 62
Query: 207 KWNGTKVWV-KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLE 265
+ +V+ K++ K P + + E+ I + +P+VV F G + + +VLE
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 266 YHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
+ L +++ ++ + F +G+ YLH + +IH DLK N+ L++
Sbjct: 123 ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDM 179
Query: 326 QLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILY 385
+KI FGL E+ K + + Y+APE+ + VD +S G ILY
Sbjct: 180 DVKIGDFGLATKIEFDGERKKDLCGTPN------YIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 386 EMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP------PDLKELIEECWDPKPV 439
++ G KPP E L K ++IK Y P LI P
Sbjct: 234 TLLVG------KPPFETSCL-----KETYIRIKKNEYSVPRHINPVASALIRRMLHADPT 282
Query: 440 IRPNFNEIIA 449
+RP+ E++
Sbjct: 283 LRPSVAELLT 292
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ 277
L+KE P + E++I+++ +H N+V+ + +++V E H DL L
Sbjct: 36 LEKEDEGIP---STTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE-HLDQDLKKLLD 91
Query: 278 K-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLR 336
+G L F L L G+ Y H+ + ++H DLKP+N+L++ G+LKI+ FGL R
Sbjct: 92 VCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
Query: 337 LQYISPEKAKIVFPVSHIDPANLYVAPEI-YKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
I K +H Y AP++ ++++ ++D +S G I EM+ G P
Sbjct: 149 AFGIPVRK------YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT-PLF 201
Query: 396 PKPPE 400
P E
Sbjct: 202 PGVSE 206
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 218 LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQ 277
L+KE P + E++I+++ +H N+V+ + +++V E H DL L
Sbjct: 36 LEKEDEGIP---STTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE-HLDQDLKKLLD 91
Query: 278 K-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLR 336
+G L F L L G+ Y H+ + ++H DLKP+N+L++ G+LKI+ FGL R
Sbjct: 92 VCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
Query: 337 LQYISPEKAKIVFPVSHIDPANLYVAPEI-YKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
I K +H Y AP++ ++++ ++D +S G I EM+ G P
Sbjct: 149 AFGIPVRK------YTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA-PLF 201
Query: 396 PKPPE 400
P E
Sbjct: 202 PGVSE 206
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 34/275 (12%)
Query: 198 ITKGSYQVAKWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV- 254
+ +G+ + KV VK LD S ++ I F E ++ HPNV++ +G
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQRE---IEEFLSEAACMKDFSHPNVIRLLGVCI 106
Query: 255 ---TQNIPM-MIVLEYHAKGDLASYL-QKKGRLSPSKV-----LRFALDLARGMNYLHEC 304
+Q IP M++L + GDL +YL + P + L+F +D+A GM YL
Sbjct: 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR 166
Query: 305 KPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP--EKAKIV-FPVSHIDPANLYV 361
+H DL +N +L + + ++ FGL + Y + +I PV ++
Sbjct: 167 N---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK-------WI 216
Query: 362 APEIYKNEEFDRSVDAYSFGLILYEM-IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKAR 420
A E + + D ++FG+ ++E+ G+ P+ E+ + G R LK +
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL-HGHR--LK-QPE 272
Query: 421 SYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
+L E++ CW P+ RP F+ + +L++++
Sbjct: 273 DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 29/264 (10%)
Query: 198 ITKGSYQVAKWNGTKV--WVKILDKESHKDPERINAFTH----ELTIVEKARHPNVVQFV 251
+ KG+Y + + G + V+I KE PER + ++ E+ + + +H N+VQ++
Sbjct: 30 LGKGTYGIV-YAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKK-GRLSPSK--VLRFALDLARGMNYLHECKPDP 308
G+ ++N + I +E G L++ L+ K G L ++ + + + G+ YLH+ +
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQ 142
Query: 309 IIHCDLKPKNILLDN-GGQLKISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
I+H D+K N+L++ G LKIS FG RL I+P + Y+APEI
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ-------YMAPEII 195
Query: 367 KN--EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPP 424
+ ++ D +S G + EM G PF+ + K P ++ S
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS--A 253
Query: 425 DLKELIEECWDPKPVIRPNFNEII 448
+ K I +C++P P R N+++
Sbjct: 254 EAKAFILKCFEPDPDKRACANDLL 277
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 168 KRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWV-KILDKESHKDP 226
K P + +PR + Y + + G K Y++ + +V+ K++ K P
Sbjct: 13 KEIPDVLVDPRTMKRY----MRGRFLGKGGFAK-CYEITDMDTKEVFAGKVVPKSMLLKP 67
Query: 227 ERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK 286
+ + E+ I + +P+VV F G + + +VLE + L +++ ++ +
Sbjct: 68 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE 127
Query: 287 VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAK 346
F +G+ YLH + +IH DLK N+ L++ +KI FGL E+ K
Sbjct: 128 ARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 184
Query: 347 IVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM 406
+ + Y+APE+ + VD +S G ILY ++ G KPP E L
Sbjct: 185 DLCGTPN------YIAPEVLCKKGHSFEVDIWSLGCILYTLLVG------KPPFETSCL- 231
Query: 407 CCEGKRPPLKIKARSYP------PDLKELIEECWDPKPVIRPNFNEIIA 449
K ++IK Y P LI P +RP+ E++
Sbjct: 232 ----KETYIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLT 276
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 287 VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPE--- 343
++ ++ +ARGM +L K IH DL +NILL +KI FGL R Y +P+
Sbjct: 201 LISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVR 257
Query: 344 KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEV 402
K P+ ++APE ++ + D +S+G++L+E+ G P+ +E
Sbjct: 258 KGDTRLPLK-------WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED 310
Query: 403 VKLMCCEGKRPPLKIKARSYP-PDLKELIEECWDPKPVIRPNFNEIIARLDRIV 455
C R ++++A Y P++ +++ +CW P RP F E++ +L ++
Sbjct: 311 F----CSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT-QNIPMMIVLEYHAKGD 271
V VK+L KE E T + H NVV +GA T Q P+M+++EY G+
Sbjct: 60 VAVKML-KEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGN 118
Query: 272 LASYLQKK 279
L++YL+ K
Sbjct: 119 LSNYLKSK 126
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 13/164 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGR-LSPSKVLRFALD 293
E+ ++++ HPN++ + A + +V ++ + DL ++ L+PS + + L
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDF-METDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
+G+ YLH+ I+H DLKP N+LLD G LK++ FGL + + SP +A H
Sbjct: 121 TLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAK-SFGSPNRA-----YXH 171
Query: 354 IDPANLYVAPE-IYKNEEFDRSVDAYSFGLILYEMIEGVQPFHP 396
Y APE ++ + VD ++ G IL E++ V PF P
Sbjct: 172 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV-PFLP 214
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
pdb|1N0Q|B Chain B, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
Length = 93
Score = 68.6 bits (166), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 77 LFMACR-GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L +A R G ++ V+ LL G+DVN+ D +GRT LH+AA GH+EVVKLLL A+++A+D
Sbjct: 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGA 162
+ G T A G++EV +L GA
Sbjct: 66 KNGRTPLHLAARNGHLEVVKLLLEAGA 92
Score = 59.3 bits (142), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 104 DGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 163
+GRT LH+AA GH+EVVKLLL A+++A+D+ G T A G++EV +L GA
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 164 V---PKTKRTPMTVA 175
V K RTP+ +A
Sbjct: 61 VNAKDKNGRTPLHLA 75
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 122/244 (50%), Gaps = 16/244 (6%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL 272
V +K+++ +S + + A T + + H ++V+ +G + + +V +Y G L
Sbjct: 45 VCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSL 101
Query: 273 ASYL-QKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
++ Q +G L P +L + + +A+GM YL E ++H +L +N+LL + Q++++
Sbjct: 102 LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVAD 158
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
FG+ L + P+ ++++ S ++A E ++ D +S+G+ ++E++ G
Sbjct: 159 FGVADL--LPPDDKQLLY--SEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG 214
Query: 391 VQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
+P+ EV L+ +G+R + + D+ ++ +CW IRP F E+
Sbjct: 215 AEPYAGLRLAEVPDLL-EKGER---LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270
Query: 451 LDRI 454
R+
Sbjct: 271 FTRM 274
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 195 ADGITKGSYQVA-KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGA 253
DG Y+ K G K+++ +S E + + E+ I+ HP +V+ +GA
Sbjct: 28 GDGAFGKVYKAKNKETGALAAAKVIETKSE---EELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 254 VTQNIPMMIVLEYHAKGDLASYLQKKGR-LSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + I++E+ G + + + + R L+ ++ + +N+LH + IIH
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHR 141
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEI-----YK 367
DLK N+L+ G ++++ FG +S + K + ++APE+ K
Sbjct: 142 DLKAGNVLMTLEGDIRLADFG------VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLK 427
+ +D D +S G+ L EM + P H P V L+ PP + + + +
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKIAKSDPPTLLTPSKWSVEFR 253
Query: 428 ELIEECWDPKPVIRPNFNEII 448
+ ++ D P RP+ +++
Sbjct: 254 DFLKIALDKNPETRPSAAQLL 274
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 122/244 (50%), Gaps = 16/244 (6%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL 272
V +K+++ +S + + A T + + H ++V+ +G + + +V +Y G L
Sbjct: 63 VCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSL 119
Query: 273 ASYL-QKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISG 331
++ Q +G L P +L + + +A+GM YL E ++H +L +N+LL + Q++++
Sbjct: 120 LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVAD 176
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-G 390
FG+ L + P+ ++++ S ++A E ++ D +S+G+ ++E++ G
Sbjct: 177 FGVADL--LPPDDKQLLY--SEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG 232
Query: 391 VQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIAR 450
+P+ EV L+ +G+R + + D+ ++ +CW IRP F E+
Sbjct: 233 AEPYAGLRLAEVPDLL-EKGER---LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 288
Query: 451 LDRI 454
R+
Sbjct: 289 FTRM 292
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Query: 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
N EL ++ + P +V F GA + + I +E+ G L L++ R+ + +
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK 118
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
++ + RG+ YL E I+H D+KP NIL+++ G++K+ FG + Q I V
Sbjct: 119 VSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFG-VSGQLIDSMANSFVG 175
Query: 350 PVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEV 402
S Y+APE + + D +S GL L E+ G P P +E+
Sbjct: 176 TRS-------YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKEL 221
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 29/264 (10%)
Query: 198 ITKGSYQVAKWNGTKV--WVKILDKESHKDPERINAFTH----ELTIVEKARHPNVVQFV 251
+ KG+Y + + G + V+I KE PER + ++ E+ + + +H N+VQ++
Sbjct: 16 LGKGTYGIV-YAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKK-GRLSPSK--VLRFALDLARGMNYLHECKPDP 308
G+ ++N + I +E G L++ L+ K G L ++ + + + G+ YLH+ +
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQ 128
Query: 309 IIHCDLKPKNILLDN-GGQLKISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIY 366
I+H D+K N+L++ G LKIS FG RL I+P + Y+APEI
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ-------YMAPEII 181
Query: 367 KN--EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPP 424
+ ++ D +S G + EM G PF+ + K P ++ S
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS--A 239
Query: 425 DLKELIEECWDPKPVIRPNFNEII 448
+ K I +C++P P R N+++
Sbjct: 240 EAKAFILKCFEPDPDKRACANDLL 263
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 195 ADGITKGSYQVA-KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGA 253
DG Y+ K G K+++ +S E + + E+ I+ HP +V+ +GA
Sbjct: 20 GDGAFGKVYKAKNKETGALAAAKVIETKSE---EELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 254 VTQNIPMMIVLEYHAKGDLASYLQKKGR-LSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
+ + I++E+ G + + + + R L+ ++ + +N+LH + IIH
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHR 133
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEI-----YK 367
DLK N+L+ G ++++ FG +S + K + ++APE+ K
Sbjct: 134 DLKAGNVLMTLEGDIRLADFG------VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLK 427
+ +D D +S G+ L EM + P H P V L+ PP + + + +
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKIAKSDPPTLLTPSKWSVEFR 245
Query: 428 ELIEECWDPKPVIRPNFNEII 448
+ ++ D P RP+ +++
Sbjct: 246 DFLKIALDKNPETRPSAAQLL 266
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 239 VEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFA 291
+E HPNVV+ + + I + +V E H DL +YL K L +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
RG+++LH + I+H DLKP+NIL+ +GG +K++ FGL R+ A +V +
Sbjct: 119 RQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
Y APE+ + VD +S G I EM
Sbjct: 176 -------WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 205 VAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARH-PNVVQFVGAVTQNIPMMIV 263
++K G + K L K R HE+ ++E A+ P V+ ++++
Sbjct: 49 ISKSTGQEYAAKFLKKRRRGQDCRAEIL-HEIAVLELAKSCPRVINLHEVYENTSEIILI 107
Query: 264 LEYHAKGDLASYL--QKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILL 321
LEY A G++ S + +S + V+R + G+ YLH+ + I+H DLKP+NILL
Sbjct: 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILL 164
Query: 322 DN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAY 378
+ G +KI FG+ R K + I Y+APEI + + D +
Sbjct: 165 SSIYPLGDIKIVDFGMSR-------KIGHACELREIMGTPEYLAPEILNYDPITTATDMW 217
Query: 379 SFGLILYEMIEGVQPF 394
+ G+I Y ++ PF
Sbjct: 218 NIGIIAYMLLTHTSPF 233
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
+G V VK +D +R +E+ I+ +H NVV+ + + +V+E+
Sbjct: 55 SGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 111
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G L + R++ ++ L + + ++ LH +IH D+K +ILL + G++K
Sbjct: 112 GGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 167
Query: 329 ISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM 387
+S FG ++ P + +V ++APE+ + VD +S G+++ EM
Sbjct: 168 LSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 220
Query: 388 IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
++G P+ +PP + +K++ PP P LK ++ P R E+
Sbjct: 221 VDGEPPYFNEPPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 278
Query: 448 I 448
+
Sbjct: 279 L 279
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
+G V VK +D +R +E+ I+ +H NVV+ + + +V+E+
Sbjct: 48 SGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 104
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G L + R++ ++ L + + ++ LH +IH D+K +ILL + G++K
Sbjct: 105 GGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 160
Query: 329 ISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM 387
+S FG ++ P + +V ++APE+ + VD +S G+++ EM
Sbjct: 161 LSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 213
Query: 388 IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
++G P+ +PP + +K++ PP P LK ++ P R E+
Sbjct: 214 VDGEPPYFNEPPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 271
Query: 448 I 448
+
Sbjct: 272 L 272
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 279 KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ 338
K L+ ++ ++ +A+GM +L K IH DL +NILL +KI FGL R
Sbjct: 194 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDI 250
Query: 339 YISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPF 394
Y P+ K P+ ++APE + + D +SFG++L+E+ G P+
Sbjct: 251 YKDPDYVRKGDARLPLK-------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 303
Query: 395 HPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKELIEECWDPKPVIRPNFNEIIARLDR 453
P + C + +++A Y P++ + + +CW +P RP F+E++ L
Sbjct: 304 ----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 359
Query: 454 IVCNCSKQ 461
++ ++Q
Sbjct: 360 LLQANAQQ 367
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 62 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 271 DLASYLQKK 279
+L++YL+ K
Sbjct: 120 NLSTYLRSK 128
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 279 KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ 338
K L+ ++ ++ +A+GM +L K IH DL +NILL +KI FGL R
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDI 248
Query: 339 YISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPF 394
Y P+ K P+ ++APE + + D +SFG++L+E+ G P+
Sbjct: 249 YKDPDYVRKGDARLPLK-------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 301
Query: 395 HPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKELIEECWDPKPVIRPNFNEIIARLDR 453
P + C + +++A Y P++ + + +CW +P RP F+E++ L
Sbjct: 302 ----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 357
Query: 454 IVCNCSKQ 461
++ ++Q
Sbjct: 358 LLQANAQQ 365
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 60 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 271 DLASYLQKK 279
+L++YL+ K
Sbjct: 118 NLSTYLRSK 126
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
+G V VK +D +R +E+ I+ +H NVV+ + + +V+E+
Sbjct: 53 SGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 109
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G L + R++ ++ L + + ++ LH +IH D+K +ILL + G++K
Sbjct: 110 GGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 165
Query: 329 ISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM 387
+S FG ++ P + +V ++APE+ + VD +S G+++ EM
Sbjct: 166 LSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 218
Query: 388 IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
++G P+ +PP + +K++ PP P LK ++ P R E+
Sbjct: 219 VDGEPPYFNEPPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 276
Query: 448 I 448
+
Sbjct: 277 L 277
>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4
pdb|2XZD|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4
Length = 136
Score = 67.4 bits (163), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A RG ++ VE LL G+DVN+ D+ GRT LH+AA GH+E+V++LL A+++A+D
Sbjct: 51 LHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQD 110
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQ 133
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 88 VEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 147
V L+ G+DVN++D G T LH+AA GH+E+V++LL A+++A D WG T A
Sbjct: 30 VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAAT 89
Query: 148 YGNVEVYNILKARGAKV 164
G++E+ +L GA V
Sbjct: 90 VGHLEIVEVLLEYGADV 106
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
+G V VK +D +R +E+ I+ +H NVV+ + + +V+E+
Sbjct: 44 SGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 100
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G L + R++ ++ L + + ++ LH +IH D+K +ILL + G++K
Sbjct: 101 GGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 156
Query: 329 ISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM 387
+S FG ++ P + +V ++APE+ + VD +S G+++ EM
Sbjct: 157 LSDFGFCAQVSKEVPRRKXLV-------GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 209
Query: 388 IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
++G P+ +PP + +K++ PP P LK ++ P R E+
Sbjct: 210 VDGEPPYFNEPPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 267
Query: 448 I 448
+
Sbjct: 268 L 268
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALD 293
+E+++++ HPN+++ +V E++ G+L + + +
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQ 154
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQL---KISGFGLLRLQYISPEKAKIVFP 350
+ G+ YLH I+H D+KP+NILL+N L KI FGL + S + +
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGL--SSFFSKD-----YK 204
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
+ Y+APE+ K ++++ D +S G+I+Y ++ G PF + ++++K
Sbjct: 205 LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK 257
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein
Length = 166
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G ++ VE LL G+DVN+ DL G T LH+AA GH+E+V++LL A+
Sbjct: 46 DGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGAD 105
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164
++A D G T A YG++E+ +L GA V
Sbjct: 106 VNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADV 139
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+LL A G V L+ G+DVN+ D DG T LH+AA GH+E+V++LL A+++A
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNAS 76
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVA---NPREVPEYELNPL 188
D G T A G++E+ +L GA V TP+ +A E+ E L
Sbjct: 77 DLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKH- 135
Query: 189 ELQVRKADGITKGSYQVAKWNGTKVWVKIL 218
V D K ++ ++ NG + +IL
Sbjct: 136 GADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN+ D DG T LH+AA GH+E+V++LL A+++A+D
Sbjct: 84 LHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQD 143
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQ 166
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRL-SPSKVLRFALD 293
E+++++ +H N+V + + +V EY K DL YL G + + V F
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
L RG+ Y H K ++H DLKP+N+L++ G+LK++ FGL R + I P
Sbjct: 109 LLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSI---------PTKT 156
Query: 354 IDPANL---YVAPEI-YKNEEFDRSVDAYSFGLILYEMIEGVQPFHP 396
D + Y P+I + ++ +D + G I YEM G +P P
Sbjct: 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG-RPLFP 202
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 197 GITKGSYQVAKWNGTKVWVKILDKES-HKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
G K G V +KI+DK + D RI E+ ++ RH ++ Q +
Sbjct: 22 GFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT---EIEALKNLRHQHICQLYHVLE 78
Query: 256 QNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLK 315
+ +VLEY G+L Y+ + RLS + + + Y+H H DLK
Sbjct: 79 TANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLK 135
Query: 316 PKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS- 374
P+N+L D +LK+ FGL + K + + + Y APE+ + + + S
Sbjct: 136 PENLLFDEYHKLKLIDFGL-----CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 375 VDAYSFGLILYEMIEGVQPF 394
D +S G++LY ++ G PF
Sbjct: 191 ADVWSMGILLYVLMCGFLPF 210
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 279 KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ 338
K L+ ++ ++ +A+GM +L K IH DL +NILL +KI FGL R
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDI 241
Query: 339 YISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPF 394
Y P+ K P+ ++APE + + D +SFG++L+E+ G P+
Sbjct: 242 YKDPDYVRKGDARLPLK-------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 294
Query: 395 HPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKELIEECWDPKPVIRPNFNEIIARLDR 453
P + C + +++A Y P++ + + +CW +P RP F+E++ L
Sbjct: 295 ----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 350
Query: 454 IV 455
++
Sbjct: 351 LL 352
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 53 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 271 DLASYLQKK 279
+L++YL+ K
Sbjct: 111 NLSTYLRSK 119
>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Maltose Binding Protein
Length = 169
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+LL A G V L+ G+DVN+ D G T LH+AA GH+E+V++LL A++DA
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDAS 76
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMT 173
D +G T A Y+G++E+ +L GA V MT
Sbjct: 77 DVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMT 115
>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
pdb|2Y0B|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
Length = 136
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A RG ++ VE LL G+DVN+ D+ GRT LH+AA GH+E+V++LL A+++A+D
Sbjct: 51 LHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQD 110
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQ 133
Score = 66.2 bits (160), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 88 VEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 147
V L+ G+DVN++D G T LH+AA GH+E+V++LL A+++ARD WG T A
Sbjct: 30 VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAAT 89
Query: 148 YGNVEVYNILKARGAKV 164
G++E+ +L GA V
Sbjct: 90 VGHLEIVEVLLEYGADV 106
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 279 KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQ 338
K L+ ++ ++ +A+GM +L K IH DL +NILL +KI FGL R
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDI 243
Query: 339 YISPE---KAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPF 394
Y P+ K P+ ++APE + + D +SFG++L+E+ G P+
Sbjct: 244 YKDPDYVRKGDARLPLK-------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 296
Query: 395 HPKPPEEVVKLMCCEGKRPPLKIKARSY-PPDLKELIEECWDPKPVIRPNFNEIIARLDR 453
P + C + +++A Y P++ + + +CW +P RP F+E++ L
Sbjct: 297 ----PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352
Query: 454 IV 455
++
Sbjct: 353 LL 354
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 213 VWVKILDKESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKG 270
V VK+L + + R A EL I + H NVV +GA T+ P+M+++E+ G
Sbjct: 55 VAVKMLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 271 DLASYLQKK 279
+L++YL+ K
Sbjct: 113 NLSTYLRSK 121
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
+G V VK +D +R +E+ I+ +H NVV+ + + +V+E+
Sbjct: 98 SGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154
Query: 269 KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK 328
G L + R++ ++ L + + ++ LH +IH D+K +ILL + G++K
Sbjct: 155 GGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 210
Query: 329 ISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEM 387
+S FG ++ P + +V ++APE+ + VD +S G+++ EM
Sbjct: 211 LSDFGFCAQVSKEVPRRKXLVG-------TPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263
Query: 388 IEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
++G P+ +PP + +K++ PP P LK ++ P R E+
Sbjct: 264 VDGEPPYFNEPPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL 321
Query: 448 I 448
+
Sbjct: 322 L 322
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 17/245 (6%)
Query: 205 VAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVL 264
+ +G V VK +D +R +E+ I+ +H NVV+ + + +V+
Sbjct: 171 TVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227
Query: 265 EYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNG 324
E+ G L + R++ ++ L + + ++ LH +IH D+K +ILL +
Sbjct: 228 EFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHD 283
Query: 325 GQLKISGFGLL-RLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
G++K+S FG ++ P + +V ++APE+ + VD +S G++
Sbjct: 284 GRVKLSDFGFCAQVSKEVPRRKXLVG-------TPYWMAPELISRLPYGPEVDIWSLGIM 336
Query: 384 LYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPN 443
+ EM++G P+ +PP + +K++ PP P LK ++ P R
Sbjct: 337 VIEMVDGEPPYFNEPPLKAMKMI--RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT 394
Query: 444 FNEII 448
E++
Sbjct: 395 AAELL 399
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 235 ELTIVEKARHPNVV---QFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFA 291
E+ I+ + RH N++ + A T + L H G L K LS + F
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 151 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLT 205
Query: 352 SHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 206 EYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 197 GITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ 256
G+ Y+ +G KV +K ES + E L+ RHP++V +G +
Sbjct: 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF---CRHPHLVSLIGFCDE 106
Query: 257 NIPMMIVLEYHAKGDLASYLQKKG----RLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
M+++ +Y G+L +L +S + L + ARG++YLH IIH
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHR 163
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH----IDPANLYVAPEIYKN 368
D+K NILLD KI+ FG+ K +H + Y+ PE +
Sbjct: 164 DVKSINILLDENFVPKITDFGI--------SKKGTELDQTHLXXVVKGTLGYIDPEYFIK 215
Query: 369 EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKL 405
D YSFG++L+E++ P E+V L
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 22/217 (10%)
Query: 197 GITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ 256
G+ Y+ +G KV +K ES + E L+ RHP++V +G +
Sbjct: 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF---CRHPHLVSLIGFCDE 106
Query: 257 NIPMMIVLEYHAKGDLASYLQKKG----RLSPSKVLRFALDLARGMNYLHECKPDPIIHC 312
M+++ +Y G+L +L +S + L + ARG++YLH IIH
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHR 163
Query: 313 DLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH----IDPANLYVAPEIYKN 368
D+K NILLD KI+ FG+ K +H + Y+ PE +
Sbjct: 164 DVKSINILLDENFVPKITDFGI--------SKKGTELGQTHLXXVVKGTLGYIDPEYFIK 215
Query: 369 EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKL 405
D YSFG++L+E++ P E+V L
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF- 290
F E I+ A P VVQ A + + +V+EY GDL + + P K +F
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWAKFY 179
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
++ ++ +H +IH D+KP N+LLD G LK++ FG + ++ +V
Sbjct: 180 TAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTC----MKMDETGMVHC 232
Query: 351 VSHIDPANLYVAPEIYKNEEFD----RSVDAYSFGLILYEMIEGVQPFH 395
+ + + Y++PE+ K++ D R D +S G+ L+EM+ G PF+
Sbjct: 233 DTAVGTPD-YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 280
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 236 LTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLA 295
L++V P +V A + +L+ GDL +L + G S + + +A ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 296 RGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHID 355
G+ ++H +++ DLKP NILLD G ++IS GL K K P + +
Sbjct: 303 LGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKK---PHASVG 352
Query: 356 PANLYVAPEIY-KNEEFDRSVDAYSFGLILYEMIEGVQPFH---PKPPEEVVKLMCCEGK 411
Y+APE+ K +D S D +S G +L++++ G PF K E+ ++
Sbjct: 353 THG-YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 412 RPPLKIKARSYPPDLKELIE 431
P S+ P+L+ L+E
Sbjct: 412 ELP-----DSFSPELRSLLE 426
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 236 LTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLA 295
L++V P +V A + +L+ GDL +L + G S + + +A ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 296 RGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHID 355
G+ ++H +++ DLKP NILLD G ++IS GL K K P + +
Sbjct: 303 LGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKK---PHASVG 352
Query: 356 PANLYVAPEIY-KNEEFDRSVDAYSFGLILYEMIEGVQPFH---PKPPEEVVKLMCCEGK 411
Y+APE+ K +D S D +S G +L++++ G PF K E+ ++
Sbjct: 353 THG-YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 412 RPPLKIKARSYPPDLKELIE 431
P S+ P+L+ L+E
Sbjct: 412 ELP-----DSFSPELRSLLE 426
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 236 LTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLA 295
L++V P +V A + +L+ GDL +L + G S + + +A ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 296 RGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHID 355
G+ ++H +++ DLKP NILLD G ++IS GL K K P + +
Sbjct: 303 LGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKK---PHASVG 352
Query: 356 PANLYVAPEIY-KNEEFDRSVDAYSFGLILYEMIEGVQPFH---PKPPEEVVKLMCCEGK 411
Y+APE+ K +D S D +S G +L++++ G PF K E+ ++
Sbjct: 353 THG-YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 412 RPPLKIKARSYPPDLKELIE 431
P S+ P+L+ L+E
Sbjct: 412 ELP-----DSFSPELRSLLE 426
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 236 LTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLA 295
L++V P +V A + +L+ GDL +L + G S + + +A ++
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 296 RGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHID 355
G+ ++H +++ DLKP NILLD G ++IS GL K K P + +
Sbjct: 302 LGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKK---PHASVG 351
Query: 356 PANLYVAPEIY-KNEEFDRSVDAYSFGLILYEMIEGVQPFH---PKPPEEVVKLMCCEGK 411
Y+APE+ K +D S D +S G +L++++ G PF K E+ ++
Sbjct: 352 THG-YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 410
Query: 412 RPPLKIKARSYPPDLKELIE 431
P S+ P+L+ L+E
Sbjct: 411 ELP-----DSFSPELRSLLE 425
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 239 VEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFA 291
+E HPNVV+ + + I + +V E H DL +YL K L +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
RG+++LH + I+H DLKP+NIL+ +GG +K++ FGL R+ +V +
Sbjct: 127 RQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTL 183
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
Y APE+ + VD +S G I EM
Sbjct: 184 -------WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 239 VEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFA 291
+E HPNVV+ + + I + +V E H DL +YL K L +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
RG+++LH + I+H DLKP+NIL+ +GG +K++ FGL R+ +FPV
Sbjct: 119 RQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALFPV 171
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
Y APE+ + VD +S G I EM
Sbjct: 172 VV---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 196 DGITKGSYQVA-----KWNGTKVWVKILDKESHKDPERINAFTH------ELTIVEKARH 244
+ I G+Y V + G +V +K K P + T+ EL I++ +H
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 245 PNVVQFVGAVTQNIP------MMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGM 298
N++ + +P + +VL+ + DL + L+ V F L RG+
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDL-MESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 172
Query: 299 NYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPAN 358
Y+H + +IH DLKP N+L++ +LKI FG+ R SP + + + ++
Sbjct: 173 KYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ--YFMTEYVATR 227
Query: 359 LYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF 394
Y APE+ + E+ +++D +S G I EM+ Q F
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPS----KVLRF 290
E I+ K +V A + +V+ GD+ ++ +P + + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ G+ +LH+ II+ DLKP+N+LLD+ G ++IS GL K K
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPK 397
++APE+ EE+D SVD ++ G+ LYEMI PF +
Sbjct: 352 TPG------FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 32/243 (13%)
Query: 196 DGITKGSYQVA-----KWNGTKVWVKILDKESHKDPERINAFTH------ELTIVEKARH 244
+ I G+Y V + G +V +K K P + T+ EL I++ +H
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 245 PNVVQFVGAVTQNIP------MMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGM 298
N++ + +P + +VL+ + DL + L+ V F L RG+
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSVYVVLDL-MESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 171
Query: 299 NYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPAN 358
Y+H + +IH DLKP N+L++ +LKI FG+ R SP + + + ++
Sbjct: 172 KYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ--YFMTEYVATR 226
Query: 359 LYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKL-MCCEGKRPPLK 416
Y APE+ + E+ +++D +S G I EM+ Q F K ++L M G P
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 286
Query: 417 IKA 419
I+A
Sbjct: 287 IQA 289
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPS----KVLRF 290
E I+ K +V A + +V+ GD+ ++ +P + + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ G+ +LH+ II+ DLKP+N+LLD+ G ++IS GL K K
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPK 397
++APE+ EE+D SVD ++ G+ LYEMI PF +
Sbjct: 352 TPG------FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPS----KVLRF 290
E I+ K +V A + +V+ GD+ ++ +P + + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ G+ +LH+ II+ DLKP+N+LLD+ G ++IS GL K K
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPK 397
++APE+ EE+D SVD ++ G+ LYEMI PF +
Sbjct: 352 TPG------FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPS----KVLRF 290
E I+ K +V A + +V+ GD+ ++ +P + + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ G+ +LH+ II+ DLKP+N+LLD+ G ++IS GL K K
Sbjct: 295 TAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPK 397
++APE+ EE+D SVD ++ G+ LYEMI PF +
Sbjct: 352 TPG------FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s
pdb|2XZT|H Chain H, Caspase-3 In Complex With Darpin-3.4_i78s
Length = 136
Score = 65.9 bits (159), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A RG ++ VE LL G+DVN+ D GRT LH+AA GH+E+V++LL A+++A+D
Sbjct: 51 LHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQD 110
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQ 133
Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 88 VEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 147
V L+ G+DVN++D G T LH+AA GH+E+V++LL A+++A D WG T A
Sbjct: 30 VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAAT 89
Query: 148 YGNVEVYNILKARGAKV 164
G++E+ +L GA V
Sbjct: 90 VGHLEIVEVLLEYGADV 106
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 21/195 (10%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G VK + K++ K E ++ +E+ ++ K +H N+V + +V++
Sbjct: 44 KATGKLFAVKCIPKKALKGKE--SSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQL 101
Query: 267 HAKGDLASYLQKKGRLS---PSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILL-- 321
+ G+L + +KG + S ++R LD + YLH I+H DLKP+N+L
Sbjct: 102 VSGGELFDRIVEKGFYTEKDASTLIRQVLD---AVYYLHRM---GIVHRDLKPENLLYYS 155
Query: 322 -DNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSF 380
D ++ IS FGL ++ E V + P YVAPE+ + + ++VD +S
Sbjct: 156 QDEESKIMISDFGLSKM-----EGKGDVMSTACGTPG--YVAPEVLAQKPYSKAVDCWSI 208
Query: 381 GLILYEMIEGVQPFH 395
G+I Y ++ G PF+
Sbjct: 209 GVIAYILLCGYPPFY 223
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALD 293
E+ ++++ +H N+V+ + + + +V E+ DL Y G L P V F
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
L +G+ + C ++H DLKP+N+L++ G+LK++ FGL R I
Sbjct: 110 LLKGLGF---CHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLW 166
Query: 354 IDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHP 396
P ++ ++Y S+D +S G I E+ +P P
Sbjct: 167 YRPPDVLFGAKLYST-----SIDMWSAGCIFAELANAARPLFP 204
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 135/307 (43%), Gaps = 24/307 (7%)
Query: 172 MTVANPREVPEYELNPLELQVRKADGITKGSYQVA-KWNGTKVWVKILDKESHKDPERIN 230
+T+ R + E+N LE G +++ + G + VK + + +K+ +
Sbjct: 13 LTIGGQRY--QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK-- 68
Query: 231 AFTHELTIVEKARH-PNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVL 288
+L +V K+ P +VQ G N + I +E G A L+K+ + P ++L
Sbjct: 69 RILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERIL 126
Query: 289 -RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKI 347
+ + + + + YL E +IH D+KP NILLD GQ+K+ FG+ K +
Sbjct: 127 GKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS 184
Query: 348 VFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF-HPKPPEEVVKLM 406
+++ P + P ++D D +S G+ L E+ G P+ + K EV+ +
Sbjct: 185 AGCAAYMAPER--IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242
Query: 407 CCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI-----IARLDRIVCNCSKQ 461
E PPL + D + +++C RP +N++ I R + + + +
Sbjct: 243 LQE--EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVAS- 299
Query: 462 GWWKDTF 468
W+KD
Sbjct: 300 -WFKDVM 305
>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|2J8S|E Chain E, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|4DX5|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX5|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
Length = 169
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 7/156 (4%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D+ G T LH+AA GH+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVANPR---EVPEYE 184
++A D GST A ++G++E+ +L GA V TP+ +A R E+ E
Sbjct: 73 VNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVL 132
Query: 185 LNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDK 220
L V D K ++ ++ NG + +IL K
Sbjct: 133 L-KYGADVNAQDKFGKTAFDISINNGNEDLAEILQK 167
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 239 VEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFA 291
+E HPNVV+ + + I + +V E H DL +YL K L +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 292 LDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV 351
RG+++LH + I+H DLKP+NIL+ +GG +K++ FGL R+ +V +
Sbjct: 119 RQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMI 388
Y APE+ + VD +S G I EM
Sbjct: 176 -------WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 6/233 (2%)
Query: 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
K G +KI++K ++ F E ++ + Q A + +V+EY
Sbjct: 83 KQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEY 142
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFAL-DLARGMNYLHECKPDPIIHCDLKPKNILLDNGG 325
+ GDL + L K G P+++ RF L ++ ++ +H +H D+KP NILLD G
Sbjct: 143 YVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCG 199
Query: 326 QLKISGFG-LLRLQYISPEKAKIVFPV-SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLI 383
++++ FG L+L+ ++ + ++ P L + D ++ G+
Sbjct: 200 HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVF 259
Query: 384 LYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDP 436
YEM G PF+ E + + L + P + ++ I+ P
Sbjct: 260 AYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP 312
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 189 ELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVV 248
E Q+++ DG + KV VK+L + + I F E +++ HP+V
Sbjct: 41 EAQLKQEDG-----------SFVKVAVKMLKADIIASSD-IEEFLREAACMKEFDHPHVA 88
Query: 249 QFVGAVTQN-----IPM-MIVLEYHAKGDLASYL------QKKGRLSPSKVLRFALDLAR 296
+ VG ++ +P+ M++L + GDL ++L + L ++RF +D+A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISP---EKAKIVFPVSH 353
GM YL IH DL +N +L + ++ FGL R Y + PV
Sbjct: 149 GMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVK- 204
Query: 354 IDPANLYVAPEIYKNEEFDRSVDAYSFGLILYE-MIEGVQPFHPKPPEEVVKLMCCEG-- 410
++A E + + D ++FG+ ++E M G P+ E+ +
Sbjct: 205 ------WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL 258
Query: 411 KRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARLDRIVCNCS 459
K+PP ++ ++ +L+ +CW P RP+F + L+ I+ + S
Sbjct: 259 KQPPECME------EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 15/180 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ ++ + HPN+++ + +VLE G+L + +KG S +
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI 157
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ YLHE + I+H DLKP+N+L LKI+ FGL ++ + +++
Sbjct: 158 LEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-----EHQVLMKT 209
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVV--KLMCCE 409
P Y APEI + + VD +S G+I Y ++ G +PF+ + ++ + +++ CE
Sbjct: 210 VCGTPG--YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE 267
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 20/256 (7%)
Query: 197 GITKGSYQVAKWN-GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255
G G Y+ + G +V +K++DK++ + +E+ I + +HP++++
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE 81
Query: 256 QNIPMMIVLEYHAKGDLASYLQKKGR-LSPSKVLRFALDLARGMNYLHECKPDPIIHCDL 314
+ + +VLE G++ YL+ + + S ++ F + GM YLH I+H DL
Sbjct: 82 DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDL 138
Query: 315 KPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS 374
N+LL +KI+ FGL + EK + + Y++PEI
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN------YISPEIATRSAHGLE 192
Query: 375 VDAYSFGLILYEMIEGVQPFHPKPPEEVV-KLMCCEGKRPP-LKIKARSYPPDLKELIEE 432
D +S G + Y ++ G PF + + K++ + + P L I+A K+LI +
Sbjct: 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEA-------KDLIHQ 245
Query: 433 CWDPKPVIRPNFNEII 448
P R + + ++
Sbjct: 246 LLRRNPADRLSLSSVL 261
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 114/254 (44%), Gaps = 30/254 (11%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGA-VTQNIPMM----- 261
G +K++D ++ E E+ +++K + H N+ + GA + +N P M
Sbjct: 48 TGQLAAIKVMDVTGDEEEE----IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103
Query: 262 IVLEYHAKGDLASYLQ--KKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNI 319
+V+E+ G + ++ K L + ++ RG+++LH+ K +IH D+K +N+
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNV 160
Query: 320 LLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE-----FDRS 374
LL ++K+ FG +S + + V + ++APE+ +E +D
Sbjct: 161 LLTENAEVKLVDFG------VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFK 214
Query: 375 VDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECW 434
D +S G+ EM EG P P + L+ + P ++K++ + + IE C
Sbjct: 215 SDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---PRNPAPRLKSKKWSKKFQSFIESCL 271
Query: 435 DPKPVIRPNFNEII 448
RP +++
Sbjct: 272 VKNHSQRPATEQLM 285
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 17/230 (7%)
Query: 209 NGTKVW-VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYH 267
N KV+ +KIL+K F E ++ + A + + +V++Y+
Sbjct: 97 NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYY 156
Query: 268 AKGDLASYLQKKGRLSPSKVLRFAL-DLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
GDL + L K P ++ RF L ++ ++ +H+ +H D+KP NIL+D G
Sbjct: 157 VGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGH 213
Query: 327 LKISGFG-LLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEE-----FDRSVDAYSF 380
++++ FG L+L E + V+ P Y++PEI + E + D +S
Sbjct: 214 IRLADFGSCLKLM----EDGTVQSSVAVGTPD--YISPEILQAMEGGKGRYGPECDWWSL 267
Query: 381 GLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELI 430
G+ +YEM+ G PF+ + E + +R + + K+LI
Sbjct: 268 GVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLI 317
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 61
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E H DL +++ P +++ + L +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFE-HVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 171
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin
Length = 166
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 7/154 (4%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D DG T LH+AA EGH+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVA---NPREVPEYE 184
++A+D+ G T A G++E+ +L GA V K TP+ +A E+ E
Sbjct: 73 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVL 132
Query: 185 LNPLELQVRKADGITKGSYQVAKWNGTKVWVKIL 218
L V D K ++ ++ NG + +IL
Sbjct: 133 LKA-GADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 77 LFMACR-GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L +A R G ++ VE LL G+DVN+ D DG T LH+AA EGH+E+V++LL A+++A+D
Sbjct: 84 LHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQD 143
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQ 166
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALD 293
E+ ++++ +H N+V+ + + + +V E+ DL Y G L P V F
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSH 353
L +G+ + C ++H DLKP+N+L++ G+LK++ FGL R I
Sbjct: 110 LLKGLGF---CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLW 166
Query: 354 IDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHP 396
P ++ ++Y S+D +S G I E+ +P P
Sbjct: 167 YRPPDVLFGAKLYST-----SIDMWSAGCIFAELANAGRPLFP 204
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 33/259 (12%)
Query: 228 RINAF-THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK 286
R+ F EL P +V GAV + + I +E G L ++++G L +
Sbjct: 127 RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR 186
Query: 287 VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILL-DNGGQLKISGFGLLRLQYISPEK- 344
L + G+ YLH + I+H D+K N+LL +G + FG + P+
Sbjct: 187 ALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQPDGL 241
Query: 345 AKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
K + +I ++APE+ D VD +S ++ M+ G P+
Sbjct: 242 GKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW---------- 291
Query: 405 LMCCEGKRPPLKIKARSYPPDLKEL-----------IEECWDPKPVIRPNFNEIIARLDR 453
+ R PL +K S PP ++E+ I+E +P+ R + E+ +++R
Sbjct: 292 ---TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNR 348
Query: 454 IVCNCSK-QGWWKDTFKLP 471
+ + W+ +K P
Sbjct: 349 ALQQVGGLKSPWRGEYKEP 367
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 137
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 138 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 192
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 193 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 237
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 129
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 184
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 185 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQ----FVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH NV+ + + + + +++ + DL L K +LS + F
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLL-KSQQLSNDHICYF 149
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+L++ LKI FGL R+ PE F
Sbjct: 150 LYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIA--DPEHDHTGFL 204
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
+ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 205 TEXV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|D Chain D, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 167
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+LL A G V L+ G+DVN++D G T LH+AA GH+E+V++LL A++DA
Sbjct: 17 KLLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAA 76
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKVPK---TKRTPMTVANPREVPEYELNPLEL- 190
D +G T A G++E+ +L GA V T TP+ +A E L +E+
Sbjct: 77 DVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLA----ADEGHLEIVEVL 132
Query: 191 -----QVRKADGITKGSYQVAKWNGTKVWVK 216
V D K ++ ++ NG + K
Sbjct: 133 LKYGADVNAQDKFGKTAFDISIDNGNEDLAK 163
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 129
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFL 184
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 185 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFL 188
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 189 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 129
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFL 184
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 185 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 188
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 189 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 129
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVA--DPDHDHTGFL 184
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 185 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 205 VAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVL 264
V+ NG + VKI++K++ R+ F T+ + + N+++ + + +V
Sbjct: 33 VSLQNGKEYAVKIIEKQAGHSRSRV--FREVETLYQCQGNKNILELIEFFEDDTRFYLVF 90
Query: 265 EYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNG 324
E G + +++QK+ + + R D+A +++LH I H DLKP+NIL ++
Sbjct: 91 EKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCESP 147
Query: 325 GQ---LKISGFGLLRLQYISPEKAKIVFP-VSHIDPANLYVAPEIY-----KNEEFDRSV 375
+ +KI F L ++ I P ++ + Y+APE+ + +D+
Sbjct: 148 EKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRC 207
Query: 376 DAYSFGLILYEMIEGVQPF 394
D +S G++LY M+ G PF
Sbjct: 208 DLWSLGVVLYIMLSGYPPF 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 127
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 128 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 182
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 183 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 131
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 132 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 186
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 187 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 134
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 135 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 189
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 190 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 234
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 135
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 136 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 190
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 191 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 235
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 126
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 127 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 181
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 182 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 226
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 188
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 189 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 127
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 128 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 182
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 183 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFL 188
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 189 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 129
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 184
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 185 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|D Chain D, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 136
Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 55/94 (58%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN++D DG T LH+AA GH+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164
++A D +G T A G++E+ +L GA V
Sbjct: 73 VNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADV 106
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D L A G ++ VE LL G+DVN+ D G T LH+AA GH+E+V++LL A+
Sbjct: 46 DGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGAD 105
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILK 158
++A+D++G TA + GN ++ IL+
Sbjct: 106 VNAQDKFGKTAFDISIDNGNEDLAEILQ 133
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 149
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 150 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 204
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 205 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
pdb|2BKG|B Chain B, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
Length = 166
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 77 LFMACR-GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L +A R G ++ VE LL G+DVN++D G T LH+AA GH+E+V++LL A+++A D
Sbjct: 51 LHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADD 110
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKV 164
GST A G++E+ +L GA V
Sbjct: 111 TIGSTPLHLAADTGHLEIVEVLLKYGADV 139
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A RG ++ VE LL G+DVN+ D G T LH+AA GH+E+V++LL A+++A+D
Sbjct: 84 LHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQD 143
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQ 166
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+LL A G V L+ G+DVN+ D G T LH+AA GH+E+V++LL A+++A
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNAL 76
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVANPR---EVPEYELNPL 188
D GST A G++E+ +L GA V TP+ +A E+ E L
Sbjct: 77 DFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLL-KY 135
Query: 189 ELQVRKADGITKGSYQVAKWNGTKVWVKIL 218
V D K ++ ++ NG + +IL
Sbjct: 136 GADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ RH N++ + + + + +++ + DL L K LS + F
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 131
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 132 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVA--DPDHDHTGFL 186
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 187 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 33/259 (12%)
Query: 228 RINAF-THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK 286
R+ F EL P +V GAV + + I +E G L ++++G L +
Sbjct: 108 RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR 167
Query: 287 VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILL-DNGGQLKISGFGLLRLQYISPEK- 344
L + G+ YLH + I+H D+K N+LL +G + FG + P+
Sbjct: 168 ALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQPDGL 222
Query: 345 AKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
K + +I ++APE+ D VD +S ++ M+ G P+
Sbjct: 223 GKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW---------- 272
Query: 405 LMCCEGKRPPLKIKARSYPPDLKEL-----------IEECWDPKPVIRPNFNEIIARLDR 453
+ R PL +K S PP ++E+ I+E +P+ R + E+ +++R
Sbjct: 273 ---TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNR 329
Query: 454 IVCNCSK-QGWWKDTFKLP 471
+ + W+ +K P
Sbjct: 330 ALQQVGGLKSPWRGEYKEP 348
>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9U|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
Length = 158
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN+ D G T LH+AA +GH+E+V++LL A+++A D
Sbjct: 43 LHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYD 102
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMT 173
R G T A G +E+ +L GA V +T
Sbjct: 103 RAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLT 140
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+LL A G V L+ G+DVN+ D +G T LH+AA G +E+V++LL A+++A
Sbjct: 9 KLLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNAS 68
Query: 135 DRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKR---TPMTVA 175
D G T A Y G++E+ +L GA V R TP+ +A
Sbjct: 69 DSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLA 112
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN+ D G T LH+AA G +E+V++LL A+++A+D
Sbjct: 76 LHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQD 135
Query: 136 RWGSTA 141
G TA
Sbjct: 136 ALGLTA 141
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLL 124
L A G ++ VE LL G+DVN+ D G TA I+ +G ++ ++L
Sbjct: 109 LHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEIL 157
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 228 RINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKV 287
R ++ +E+ +++K +H N+V +V++ + G+L + ++G +
Sbjct: 49 RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDA 108
Query: 288 LRFALDLARGMNYLHECKPDPIIHCDLKPKNILL---DNGGQLKISGFGLLRLQYISPEK 344
+ + YLHE + I+H DLKP+N+L + ++ I+ FGL +++
Sbjct: 109 SLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME------ 159
Query: 345 AKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
+ + P YVAPE+ + + ++VD +S G+I Y ++ G PF+
Sbjct: 160 QNGIMSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY 208
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKG-RLSPSKVLRFAL 292
+E++I+ + HP ++ A M+++LE+ + G+L + + ++S ++V+ +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 293 DLARGMNYLHECKPDPIIHCDLKPKNILLDN--GGQLKISGFGLLRLQYISPEKAKIVFP 350
G+ ++HE I+H D+KP+NI+ + +KI FGL ++P++
Sbjct: 157 QACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGL--ATKLNPDEI----- 206
Query: 351 VSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
V + APEI E D ++ G++ Y ++ G+ PF
Sbjct: 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
pdb|3NOC|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D G T LH+AA GH+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKR---TPMTVANPR---EVPEYE 184
++A+D G T A G++E+ +L GA V + TP+ +A R E+ E
Sbjct: 73 VNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVL 132
Query: 185 LNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDK 220
L V D K ++ ++ NG + +IL K
Sbjct: 133 LKN-GADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 99/233 (42%), Gaps = 42/233 (18%)
Query: 244 HPNVVQFVGA---VTQNIPM--MIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGM 298
H N+ +F+ VT + M ++V+EY+ G L YL S R A + RG+
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSC-RLAHSVTRGL 124
Query: 299 NYLHECKPD------PIIHCDLKPKNILLDNGGQLKISGFGL-LRL---QYISP---EKA 345
YLH P I H DL +N+L+ N G IS FGL +RL + + P + A
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 346 KI--VFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPP---- 399
I V + ++ P L A + E + VD Y+ GLI +E+ P
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244
Query: 400 --------------EEVVKLMCCEGKRP--PLKIKARSYPP-DLKELIEECWD 435
E++ L+ E +RP P K S LKE IE+CWD
Sbjct: 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWD 297
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KCQHLSNDHICYF 133
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 188
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 189 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph
(3')-Iiia In Complex With The Inhibitor Ar_3a
pdb|2BKK|D Chain D, Crystal Structure Of Aminoglycoside Phosphotransferase Aph
(3')-Iiia In Complex With The Inhibitor Ar_3a
Length = 169
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A RG ++ VE LL G+DVN++D G T LH+AA +GH+E+V++LL A+++A+D
Sbjct: 84 LHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQD 143
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQ 166
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D G T LH+ GH+E++++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTK---RTPMTVA---NPREVPEYE 184
++A D+ G T A Y G++E+ +L GA V TP+ +A E+ E
Sbjct: 73 VNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVL 132
Query: 185 LNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDK 220
L V D K ++ ++ NG + +IL K
Sbjct: 133 L-KYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 129/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I++ P+ E
Sbjct: 44 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 162
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 163 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKE-----YHAEG 212
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 213 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 271
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 272 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 310
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 17 RILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 77 VMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 185
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 244
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 245 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ RH N++ + + + + +++ + DL L K LS + F
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 131
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 132 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 186
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
++ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 187 TEYV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 11 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 71 VMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 179
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 238
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 239 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 229 INAFTHELTIVEKARHPNVVQFVGAVT--QNIPMMIVLEYHAKGDLASYLQKKGRLSPSK 286
I E+ I++K HPNVV+ V + + +V E +G + K LS +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQ 138
Query: 287 VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL-RLQYISPEKA 345
+ DL +G+ YLH K IIH D+KP N+L+ G +KI+ FG+ + +
Sbjct: 139 ARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS 195
Query: 346 KIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKL 405
V + + P +L +I+ +++D ++ G+ LY + G PF + ++
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSG----KALDVWAMGVTLYCFVFGQCPFMDE------RI 245
Query: 406 MCCEGKRPPLKIKARSYP------PDLKELIEECWDPKPVIRPNFNEI 447
MC K +K +A +P DLK+LI D P R EI
Sbjct: 246 MCLHSK---IKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 25/196 (12%)
Query: 260 MMIVLEYHAKGDLASYLQKKGRLSPSKVLRFAL--DLARGMNYLHECKPDPIIHCDLKPK 317
+ I +E+ KG L +++K+ KVL L + +G++Y+H K +IH DLKP
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LIHRDLKPS 165
Query: 318 NILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDA 377
NI L + Q+KI FGL+ ++ + + Y++PE ++++ + VD
Sbjct: 166 NIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLR-------YMSPEQISSQDYGKEVDL 218
Query: 378 YSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLK--IKARSYPPDLKELIEECWD 435
Y+ GLIL E++ E K L+ I + + K L+++
Sbjct: 219 YALGLILAELLHVCD-----TAFETSKFF------TDLRDGIISDIFDKKEKTLLQKLLS 267
Query: 436 PKPVIRPNFNEIIARL 451
KP RPN +EI+ L
Sbjct: 268 KKPEDRPNTSEILRTL 283
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKG--DLASYLQKKGRLSPSKVLRF 290
E+ ++ + RH NV+Q V + + M +V+EY G ++ + +K R + +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGY 114
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
L G+ YLH I+H D+KP N+LL GG LKIS G+ + + P A
Sbjct: 115 FCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV--AEALHPFAADDTCR 169
Query: 351 VSHIDPANLYVAPEIYKN-EEFDR-SVDAYSFGLILYEMIEGVQPF 394
S PA + PEI + F VD +S G+ LY + G+ PF
Sbjct: 170 TSQGSPA--FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 91
Score = 63.2 bits (152), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 55/88 (62%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D DG T LH+AA EGH+E+V++LL A+
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 60
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILK 158
++A+D++G TA + GN ++ IL+
Sbjct: 61 VNAQDKFGKTAFDISIDNGNEDLAEILQ 88
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 65
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E H DL ++ P +++ + L +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFE-HVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 175
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 198 ITKGSYQVAK-----WNGTKVWVKILDKESHKDPERINA--FTHELTIVEKARHPNVVQF 250
I KG++ V + G + VKI+D ++ E +I +HP++V+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 251 VGAVTQNIPMMIVLEYHAKGDLASYLQKKGR----LSPSKVLRFALDLARGMNYLHECKP 306
+ + + + +V E+ DL + K+ S + + + + Y H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD--- 148
Query: 307 DPIIHCDLKPKNILL---DNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ IIH D+KP+N+LL +N +K+ FG+ I ++ +V P ++AP
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVA----IQLGESGLVAGGRVGTPH--FMAP 202
Query: 364 EIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
E+ K E + + VD + G+IL+ ++ G PF+
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 172
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 14 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 74 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 182
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 241
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 242 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 13 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 73 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 181
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 240
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 241 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 70 VMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKE-----YHAEG 178
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 237
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 238 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 72 VMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 180
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 239
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 240 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 11 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 71 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 179
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 238
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 239 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 133
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 188
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
+ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 189 XEXV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAV----TQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
E+ I+ + RH N++ + + + + +++ + DL L K LS + F
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDHICYF 134
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H ++H DLKP N+LL+ LKI FGL R+ P+ F
Sbjct: 135 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFL 189
Query: 351 VSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMIEGVQPFHP 396
+ Y APEI N + + +S+D +S G IL EM+ +P P
Sbjct: 190 XEXV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 234
>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
pdb|2V4H|D Chain D, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
Length = 136
Score = 62.8 bits (151), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 49/71 (69%)
Query: 88 VEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 147
VE LL G+DVN+ D DG T LH+AA GH+E+V++LL A+++A+D++G TA +
Sbjct: 63 VEVLLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISID 122
Query: 148 YGNVEVYNILK 158
GN ++ IL+
Sbjct: 123 NGNEDLAEILQ 133
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 53/94 (56%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D G T LH+AA H+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164
++A D GST A +G++E+ +L GA V
Sbjct: 73 VNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADV 106
Score = 33.1 bits (74), Expect = 0.32, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLL 124
D + L A G ++ VE LL G+DVN+ D G+TA I+ G+ ++ ++L
Sbjct: 79 DGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKE-----YHAEG 178
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 237
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 238 LP-------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 28/223 (12%)
Query: 176 NPREVPEYELNPLELQVRKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPER 228
P PE+ N +K + I +G+Y V K G V +K LD E+ P
Sbjct: 1 GPLGSPEFMEN-----FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP-- 53
Query: 229 INAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKV 287
+ E++++++ HPN+V+ + + + +V E+ + DL ++ P +
Sbjct: 54 -STAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 111
Query: 288 LR-FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAK 346
++ + L +G+ + H + ++H DLKP+N+L++ G +K++ FGL R + P +
Sbjct: 112 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT- 166
Query: 347 IVFPVSHIDPANLYVAPEIYKNEE-FDRSVDAYSFGLILYEMI 388
+H Y APEI + + +VD +S G I EM+
Sbjct: 167 ----YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 28/223 (12%)
Query: 176 NPREVPEYELNPLELQVRKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPER 228
P PE+ N +K + I +G+Y V K G V +K LD E+ P
Sbjct: 1 GPLGSPEFMEN-----FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP-- 53
Query: 229 INAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKV 287
+ E++++++ HPN+V+ + + + +V E+ + DL ++ P +
Sbjct: 54 -STAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 111
Query: 288 LR-FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAK 346
++ + L +G+ + H + ++H DLKP+N+L++ G +K++ FGL R + P +
Sbjct: 112 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT- 166
Query: 347 IVFPVSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMI 388
+H Y APEI + + +VD +S G I EM+
Sbjct: 167 ----YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 205
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 13 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 181
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 240
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 241 LP-------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 279
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 20 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 139 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 188
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 247
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 248 LP-------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 172
Query: 364 EIYKNEE-FDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 17 RILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 185
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 244
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 245 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKE-----YHAEG 178
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 237
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 238 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 86/173 (49%), Gaps = 13/173 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL-QKKGRLSPSKVLRFALD 293
E+ + RHP +V A + M+++ E+ + G+L + + ++S + + +
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 263
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDN--GGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ +G+ ++HE + +H DLKP+NI+ +LK+ FGL ++ P+++ V
Sbjct: 264 VCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLT--AHLDPKQS-----V 313
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
+ APE+ + + D +S G++ Y ++ G+ PF + +E ++
Sbjct: 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 366
>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4
pdb|2Y1L|F Chain F, Caspase-8 In Complex With Darpin-8.4
Length = 169
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Query: 91 LLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150
L+ G+DVN+ D G T LH+AA GH+E+V++LL A+++A D G T A +G+
Sbjct: 33 LMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGH 92
Query: 151 VEVYNILKARGAKVPKTK---RTPMTVA---NPREVPEYELNPLELQVRKADGITKGSYQ 204
+E+ +L GA V TP+ +A E+ E L V D K ++
Sbjct: 93 LEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAFD 151
Query: 205 VAKWNGTKVWVKILDK 220
++ NG + +IL K
Sbjct: 152 ISIDNGNEDLAEILQK 167
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 55/83 (66%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN+ D++G T LH+AA GH+E+V++LL A+++A+D
Sbjct: 84 LRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQD 143
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQ 166
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN++D G T L +AA GH+E+V++LL A+++A D
Sbjct: 51 LHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNAND 110
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMT 173
G T A +G++E+ +L GA V + T
Sbjct: 111 MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKT 148
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 49 QSSLDPIRRSPVQDELTVPE------------NLDSTMQLLFMACRGDVKGVEDLLNEGS 96
+ + P+R + + L + E +++ L A G ++ VE LL G+
Sbjct: 78 HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137
Query: 97 DVNSIDLDGRTALHIAACEGHVEVVKLL 124
DVN+ D G+TA I+ G+ ++ ++L
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEIL 165
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 65
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL +++ P +++ + L +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 175
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 63
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 173
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 10 RILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 178
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 237
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 238 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 172
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 61
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 171
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 172
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 17 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 185
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 244
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 245 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 129/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 72 VMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FG R + + E+ + H +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEY-----HAEG 180
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 239
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 240 LP-------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 86/173 (49%), Gaps = 13/173 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYL-QKKGRLSPSKVLRFALD 293
E+ + RHP +V A + M+++ E+ + G+L + + ++S + + +
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 157
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDN--GGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ +G+ ++HE + +H DLKP+NI+ +LK+ FGL ++ P+++ V
Sbjct: 158 VCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLT--AHLDPKQS-----V 207
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
+ APE+ + + D +S G++ Y ++ G+ PF + +E ++
Sbjct: 208 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 260
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 10 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 66
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 176
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI GFGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 4 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 123 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKE-----YHAEG 172
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 231
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 232 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 61
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 171
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 169
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%)
Query: 88 VEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 147
VE LL G+DVN+ D DG T LH+AA GH+E+V++LL A+++A+D +G T A
Sbjct: 63 VEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAAD 122
Query: 148 YGNVEVYNILKARGAKVPKTKRTPMTV 174
G++E+ +L GA V + T
Sbjct: 123 RGHLEIVEVLLKHGADVNAQDKFGKTA 149
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D G T LH+AA GH E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKR---TPMTVANPR---EVPEYE 184
++ARD G T A G++E+ +L GA V TP+ +A R E+ E
Sbjct: 73 VNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVL 132
Query: 185 LNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDK 220
L V D K ++ ++ NG + +IL K
Sbjct: 133 LKH-GADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 16 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 238 IVEKARHPNVVQFVGA--------VTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
++ +P+V + +G +TQ +P +L+Y + K + +L
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY--------VREHKDNIGSQYLLN 127
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
+ + +A+GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ +
Sbjct: 128 WCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-- 180
Query: 350 PVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKL 405
H + + ++A E + + D +S+G+ ++E++ G +P+ P E+ +
Sbjct: 181 ---HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 237
Query: 406 MCCEGKRPPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ +G+R P PP D+ ++ +CW RP F E+I ++
Sbjct: 238 L-EKGERLP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282
>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From
Lactococcal Phage Tp901-1
Length = 136
Score = 62.0 bits (149), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 48/71 (67%)
Query: 88 VEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 147
VE LL G+DVN+ID G T LH+ A GH+E+V++LL A+++A+D++G TA +
Sbjct: 63 VEVLLKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISID 122
Query: 148 YGNVEVYNILK 158
GN ++ IL+
Sbjct: 123 NGNEDLAEILQ 133
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D G T LH+AA H+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164
++A D G T YG++E+ +L GA V
Sbjct: 73 VNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADV 106
Score = 32.3 bits (72), Expect = 0.64, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLL 124
L +A G ++ VE LL G+DVN+ D G+TA I+ G+ ++ ++L
Sbjct: 84 LHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 198 ITKGSYQVAKW-----NGTKVWVKILDKESHKDPERINA--FTHELTIVEKARHPNVVQF 250
I KG + V + G + VKI+D ++ E +I +HP++V+
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 251 VGAVTQNIPMMIVLEYHAKGDLASYLQKKGR----LSPSKVLRFALDLARGMNYLHECKP 306
+ + + + +V E+ DL + K+ S + + + + Y H+
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD--- 150
Query: 307 DPIIHCDLKPKNILL---DNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ IIH D+KP +LL +N +K+ GFG+ I ++ +V P ++AP
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA----IQLGESGLVAGGRVGTPH--FMAP 204
Query: 364 EIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
E+ K E + + VD + G+IL+ ++ G PF+
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFY 236
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 180
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 239
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 240 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 13 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKE-----YHAEG 181
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 240
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 241 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 65
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 175
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 178
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 237
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 238 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 8 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 64
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 174
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 198 ITKGSYQVAK-----WNGTKVWVKILDKESHKDPERINA--FTHELTIVEKARHPNVVQF 250
I KG + V + G + VKI+D ++ E +I +HP++V+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 251 VGAVTQNIPMMIVLEYHAKGDLASYLQKKGR----LSPSKVLRFALDLARGMNYLHECKP 306
+ + + + +V E+ DL + K+ S + + + + Y H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD--- 148
Query: 307 DPIIHCDLKPKNILL---DNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ IIH D+KP +LL +N +K+ GFG+ I ++ +V P ++AP
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA----IQLGESGLVAGGRVGTPH--FMAP 202
Query: 364 EIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
E+ K E + + VD + G+IL+ ++ G PF+
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 35 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 238 IVEKARHPNVVQFVGA--------VTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
++ +P+V + +G +TQ +P +L+Y + K + +L
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY--------VREHKDNIGSQYLLN 146
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
+ + +A+GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ +
Sbjct: 147 WCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-- 199
Query: 350 PVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKL 405
H + + ++A E + + D +S+G+ ++E++ G +P+ P E+ +
Sbjct: 200 ---HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 256
Query: 406 MCCEGKRPPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ +G+R P PP D+ ++ +CW RP F E+I ++
Sbjct: 257 L-EKGERLP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 13 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEY-----HAEG 181
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 240
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 241 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 192 VRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFV 251
VR+ I G AK TK L H+ ER E I +HPN+V+
Sbjct: 20 VRRCMKIPTGQEYAAKIINTKK----LSARDHQKLER------EARICRLLKHPNIVRLH 69
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
++++ +V + G+L + + S + + +N+ C + I+H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH---CHLNGIVH 126
Query: 312 CDLKPKNILL---DNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN 368
DLKP+N+LL G +K++ FGL ++ ++A F + P Y++PE+ +
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGL-AIEVQGDQQAWFGFAGT---PG--YLSPEVLRK 180
Query: 369 EEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + + VD ++ G+ILY ++ G PF
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 63
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 173
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 65
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 125 HR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 175
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ +++ HPN+++ +V+E + G+L + + + + +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYISPEKAKIVFPV 351
G+ YLH+ I+H DLKP+N+LL++ + +KI FGL + + + +K K
Sbjct: 146 LSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV-FENQKKMKERLGT 201
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
++ Y+APE+ + +++D D +S G+IL+ ++ G PF + +E+++
Sbjct: 202 AY------YIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILR 247
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 10 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 66
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 176
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 8 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 64
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 174
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 129/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 72 VMASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FG R + + E+ + H +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEY-----HAEG 180
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 239
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 240 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 63
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 173
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 65
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 175
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 8 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 64
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 174
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 129/286 (45%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 14 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++++ G L Y+++ K + +L + + +A+
Sbjct: 74 VMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FG R + + E+ + H +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKE-----YHAEG 182
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 241
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 242 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E A V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 65
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 175
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
++I++E G+L S +Q++G + + D+ + +LH I H D+KP+
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPE 138
Query: 318 NILL---DNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS 374
N+L + LK++ FG + + + P YVAPE+ E++D+S
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTP--------YYVAPEVLGPEKYDKS 190
Query: 375 VDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP-PDLKELIEEC 433
D +S G+I+Y ++ G PF+ + + G + +++ +P P+ E+ E
Sbjct: 191 CDMWSLGVIMYILLCGFPPFYSNTGQAI-----SPGMKRRIRLGQYGFPNPEWSEVSE-- 243
Query: 434 WDPKPVIR 441
D K +IR
Sbjct: 244 -DAKQLIR 250
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 192 VRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFV 251
VR+ I G AK TK L H+ ER E I +HPN+V+
Sbjct: 20 VRRCMKIPTGQEYAAKIINTKK----LSARDHQKLER------EARICRLLKHPNIVRLH 69
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
++++ +V + G+L + + S + + +N+ C + I+H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH---CHLNGIVH 126
Query: 312 CDLKPKNILL---DNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN 368
DLKP+N+LL G +K++ FGL ++ ++A F + P Y++PE+ +
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGL-AIEVQGDQQAWFGFAGT---PG--YLSPEVLRK 180
Query: 369 EEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + + VD ++ G+ILY ++ G PF
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 172
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E A V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLAQM 265
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 172
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 172
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 61
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 171
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 61
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 171
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 18/185 (9%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
N V +K + + E+ E+ ++K RHPN +Q+ G + +V+EY
Sbjct: 78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-C 136
Query: 269 KGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQL 327
G + L+ K L ++ +G+ YLH +IH D+K NILL G +
Sbjct: 137 LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLV 193
Query: 328 KISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEI---YKNEEFDRSVDAYSFGLIL 384
K+ FG A I+ P + ++APE+ ++D VD +S G+
Sbjct: 194 KLGDFG----------SASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 243
Query: 385 YEMIE 389
E+ E
Sbjct: 244 IELAE 248
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 8 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 64
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 174
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 172
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E A V
Sbjct: 127 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFV-- 179
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 180 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 235 VGTPGAELLKKISSESARNYIQSLAQM 261
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 260 MMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPK 317
++I++E G+L S +Q++G + + D+ + +LH I H D+KP+
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPE 157
Query: 318 NILL---DNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS 374
N+L + LK++ FG + + + P YVAPE+ E++D+S
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY--------YVAPEVLGPEKYDKS 209
Query: 375 VDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYP-PDLKELIEEC 433
D +S G+I+Y ++ G PF+ + + G + +++ +P P+ E+ E
Sbjct: 210 CDMWSLGVIMYILLCGFPPFYSNTGQAI-----SPGMKRRIRLGQYGFPNPEWSEVSE-- 262
Query: 434 WDPKPVIR 441
D K +IR
Sbjct: 263 -DAKQLIR 269
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 122 HR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 172
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 63
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 173
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 18/183 (9%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
K L H+ ER E I +HPN+V+ ++++ +V + G+L
Sbjct: 66 TKKLSARDHQKLER------EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE 119
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISG 331
+ + S + + +N++H+ I+H DLKP+N+LL + G +K++
Sbjct: 120 DIVAREYYSEADASHCIHQILESVNHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLAD 176
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGV 391
FGL ++ ++A F + P Y++PE+ + + + + VD ++ G+ILY ++ G
Sbjct: 177 FGL-AIEVQGEQQAWFGFAGT---PG--YLSPEVLRKDPYGKPVDIWACGVILYILLVGY 230
Query: 392 QPF 394
PF
Sbjct: 231 PPF 233
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWVKI--LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V +K LD E+ P + E++++++ HP
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKELNHP 63
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + H Y AP
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT-----YXHEVVTLWYRAP 173
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 127/293 (43%), Gaps = 42/293 (14%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 12 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 238 IVEKARHPNVVQFVGA--------VTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
++ +P+V + +G +TQ +P +L+Y + K + +L
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY--------VREHKDNIGSQYLLN 123
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
+ + +A+GMNYL + + ++H DL +N+L+ +KI+ FG R + + E+ +
Sbjct: 124 WCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEY-- 176
Query: 350 PVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKL 405
H + + ++A E + + D +S+G+ ++E++ G +P+ P E+ +
Sbjct: 177 ---HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 233
Query: 406 MCCEGKRPPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ +G+R P PP D+ ++ +CW RP F E+I ++
Sbjct: 234 L-EKGERLP-------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 127/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 7 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + +I + G L Y+++ K + +L + + +A
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FGL +L + E+ + H +
Sbjct: 126 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKE-----YHAEG 175
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 234
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 235 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 273
>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
pdb|2JAB|B Chain B, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
pdb|2JAB|C Chain C, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
Length = 136
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L G ++ VE LL G+DVN++D G T LH+AA GH+E+ ++LL A+++A+D
Sbjct: 51 LYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQD 110
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 111 KFGKTAFDISIGNGNEDLAEILQ 133
Score = 56.6 bits (135), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D G T L++A GH+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164
++A D G T A + G++E+ +L GA V
Sbjct: 73 VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADV 106
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 41/237 (17%)
Query: 235 ELTIVEKARHPNVVQFVG----------------AVTQNIPMMIVLEYHAKGDLASYLQK 278
E+ + K H N+V + G + ++ + I +E+ KG L +++K
Sbjct: 54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 279 KGRLSPSKVLRFAL--DLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLR 336
+ KVL L + +G++Y+H K +I+ DLKP NI L + Q+KI FGL+
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 337 LQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHP 396
++ + + Y++PE ++++ + VD Y+ GLIL E++
Sbjct: 171 SLKNDGKRXRSKGTLR-------YMSPEQISSQDYGKEVDLYALGLILAELLHVCD---- 219
Query: 397 KPPEEVVKLMCCEGKRPPLK--IKARSYPPDLKELIEECWDPKPVIRPNFNEIIARL 451
E K L+ I + + K L+++ KP RPN +EI+ L
Sbjct: 220 -TAFETSKFF------TDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 31/244 (12%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
N V +K + + E+ E+ ++K RHPN +Q+ G + +V+EY
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-C 97
Query: 269 KGDLASYLQ-KKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQL 327
G + L+ K L ++ +G+ YLH +IH D+K NILL G +
Sbjct: 98 LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLV 154
Query: 328 KISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEI---YKNEEFDRSVDAYSFGLIL 384
K+ FG A I+ P + ++APE+ ++D VD +S G+
Sbjct: 155 KLGDFG----------SASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 204
Query: 385 YEMIEGVQPFHPKPPEEVVKLMC-----CEGKRPPLKIKARSYPPDLKELIEECWDPKPV 439
E+ E KPP + M + + P L ++ + + ++ C P
Sbjct: 205 IELAE------RKPPLFNMNAMSALYHIAQNESPAL--QSGHWSEYFRNFVDSCLQKIPQ 256
Query: 440 IRPN 443
RP
Sbjct: 257 DRPT 260
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWV-KI-LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V + KI LD E+ P + E++++++ HP
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVP---STAIREISLLKELNHP 62
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 172
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 193 RKADGITKGSYQVA-----KWNGTKVWV-KI-LDKESHKDPERINAFTHELTIVEKARHP 245
+K + I +G+Y V K G V + KI LD E+ P + E++++++ HP
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVP---STAIREISLLKELNHP 61
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS-PSKVLR-FALDLARGMNYLHE 303
N+V+ + + + +V E+ + DL ++ P +++ + L +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 304 CKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAP 363
+ ++H DLKP+N+L++ G +K++ FGL R + P + +H Y AP
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT-----YTHEVVTLWYRAP 171
Query: 364 EIYKN-EEFDRSVDAYSFGLILYEMI 388
EI + + +VD +S G I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
pdb|3NOG|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A RG ++ VE LL G+DVN+ D +G T LH+AA GH+E+V++LL A+++A+D
Sbjct: 84 LHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQD 143
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 144 KFGKTAFDISIDNGNEDLAEILQ 166
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN+ D G T LH+AA GH+EVV++LL A+++A D
Sbjct: 51 LHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNAND 110
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMT 173
G T A G++E+ +L GA V + T
Sbjct: 111 HNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKT 148
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D G T LH+AA GH+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKR---TPMTVANPREVPEYELNP 187
++A D G T A G++EV +L GA V TP+ +A + E+
Sbjct: 73 VNADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLA--ANIGHLEIVE 130
Query: 188 LELQ----VRKADGITKGSYQVAKWNGTKVWVKILDK 220
+ L+ V D K ++ ++ NG + +IL K
Sbjct: 131 VLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|Q Chain Q, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|R Chain R, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|S Chain S, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|T Chain T, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|U Chain U, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
Length = 169
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 11/158 (6%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DVN+ D G T LH+AA GH+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYE--LNPL 188
++A D +G+T A G++E+ +L GA V T P + Y+ L +
Sbjct: 73 VNAWDNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFT---PLHLAAYDGHLEIV 129
Query: 189 EL------QVRKADGITKGSYQVAKWNGTKVWVKILDK 220
E+ V D K ++ ++ NG + +IL K
Sbjct: 130 EVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 127/293 (43%), Gaps = 42/293 (14%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 17 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 238 IVEKARHPNVVQFVGA--------VTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
++ +P+V + +G +TQ +P +L+Y + K + +L
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDY--------VREHKDNIGSQYLLN 128
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
+ + +A+GMNYL + + ++H DL +N+L+ +KI+ FG R + + E+ +
Sbjct: 129 WCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEY-- 181
Query: 350 PVSHIDPANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKL 405
H + + ++A E + + D +S+G+ ++E++ G +P+ P E+ +
Sbjct: 182 ---HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 238
Query: 406 MCCEGKRPPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
+ +G+R P PP D+ ++ +CW RP F E+I ++
Sbjct: 239 L-EKGERLP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268
G KV +K L + + A+ EL +++ RH NV+ + T + + +++
Sbjct: 49 TGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL 107
Query: 269 ----KGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNG 324
G L K +L ++ + +G+ Y+H IIH DLKP N+ ++
Sbjct: 108 VMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNED 164
Query: 325 GQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLI 383
+LKI FGL R Q S +V Y APE+ N + ++VD +S G I
Sbjct: 165 CELKILDFGLAR-QADSEMXGXVV--------TRWYRAPEVILNWMRYTQTVDIWSVGCI 215
Query: 384 LYEMIEGVQPF 394
+ EMI G F
Sbjct: 216 MAEMITGKTLF 226
>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain
Fold
Length = 92
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DV + D +G T LH+AA GH+EVVKLLL A+
Sbjct: 5 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD 64
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILK 158
++A+D++G TA + GN ++ IL+
Sbjct: 65 VNAQDKFGKTAFDISIDNGNEDLAEILQ 92
Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 112 AACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164
AA G + V++L++ A++ A+D+ GST A G++EV +L GA V
Sbjct: 13 AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV 65
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 133 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYV-- 185
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 186 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 240
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 241 VGTPGAELLKKISSESARNYIQSLTQM 267
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 137 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYV-- 189
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 190 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 244
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 245 VGTPGAELLKKISSESARNYIQSLTQM 271
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 128/286 (44%), Gaps = 28/286 (9%)
Query: 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELT 237
R + E E +++ A G + + K+ V I + P+ E
Sbjct: 10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLAR 296
++ +P+V + +G + + ++ + G L Y+++ K + +L + + +A+
Sbjct: 70 VMASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 297 GMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDP 356
GMNYL + + ++H DL +N+L+ +KI+ FG R + + E+ + H +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEY-----HAEG 178
Query: 357 ANL---YVAPEIYKNEEFDRSVDAYSFGLILYEMIE-GVQPFHPKPPEEVVKLMCCEGKR 412
+ ++A E + + D +S+G+ ++E++ G +P+ P E+ ++ +G+R
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGER 237
Query: 413 PPLKIKARSYPP----DLKELIEECWDPKPVIRPNFNEIIARLDRI 454
P PP D+ ++ +CW RP F E+I ++
Sbjct: 238 LP-------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + + E V
Sbjct: 138 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYV-- 190
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 191 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 246 VGTPGAELLKKISSESARNYIQSLTQM 272
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + + E V
Sbjct: 138 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYV-- 190
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 191 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 246 VGTPGAELLKKISSESARNYIQSLTQM 272
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 17/261 (6%)
Query: 197 GITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ 256
G+ + + + T+V +K+LDK E +F +++ K H ++V G
Sbjct: 27 GVRREVGDYGQLHETEVLLKVLDKAHRNYSE---SFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 257 NIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLK 315
++V E+ G L +YL+K K ++ L A LA M++L E + +IH ++
Sbjct: 84 GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVC 140
Query: 316 PKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-EEFDRS 374
KNILL K ++L P + V P + +V PE +N + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLS--DPGISITVLPKDILQERIPWVPPECIENPKNLNLA 198
Query: 375 VDAYSFGLILYEMIEGV-QPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEEC 433
D +SFG L+E+ G +P + ++ + P K +L LI C
Sbjct: 199 TDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK------AAELANLINNC 252
Query: 434 WDPKPVIRPNFNEIIARLDRI 454
D +P RP+F II L+ +
Sbjct: 253 MDYEPDHRPSFRAIIRDLNSL 273
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + + E V
Sbjct: 138 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYV-- 190
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 191 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 246 VGTPGAELLKKISSESARNYIQSLTQM 272
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 127 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 179
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 180 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 235 VGTPGAELLKKISSESARNYIQSLAQM 261
>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige
Inhibitor
pdb|4GRG|B Chain B, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige
Inhibitor
Length = 135
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 52/83 (62%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A G ++ VE LL G+DVN+ GRT LH+AA H+E+V++LL A+++A+D
Sbjct: 51 LHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNAQD 110
Query: 136 RWGSTAAADAKYYGNVEVYNILK 158
++G TA + GN ++ IL+
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQ 133
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 50/94 (53%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L G+DVN+ D G T LH+AA GH+E+V++LL A+
Sbjct: 13 DLGKKLLEAARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGAD 72
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164
++A G T A + ++E+ +L GA V
Sbjct: 73 VNATGNTGRTPLHLAAWADHLEIVEVLLKHGADV 106
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 136 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV-- 188
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 189 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 243
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 244 VGTPGAELLKKISSESARNYIQSLTQM 270
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 136 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV-- 188
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 189 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 243
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 244 VGTPGAELLKKISSESARNYIQSLTQM 270
>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain
Fold
Length = 110
Score = 59.3 bits (142), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN 130
D +LL A G V L+ G+DV + D +G T LH+AA GH+EVVKLLL A+
Sbjct: 23 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD 82
Query: 131 IDARDRWGSTAAADAKYYGNVEVYNILK 158
+ A+D++G TA + GN ++ IL+
Sbjct: 83 VXAQDKFGKTAFDISIDNGNEDLAEILQ 110
Score = 33.5 bits (75), Expect = 0.26, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 91 LLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150
L+ GS + S DL G+ L AA G + V++L++ A++ A+D+ GST A G+
Sbjct: 13 LVPRGSHMGS-DL-GKKLLE-AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGH 69
Query: 151 VEVYNILKARGAKV 164
+EV +L GA V
Sbjct: 70 LEVVKLLLEAGADV 83
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 198 ITKGSYQVA-----KWNGTKVWVKILD--KESHKDPERINAFTHELTIVEKARHPNVVQF 250
+ KG++ V K G + KI++ K S +D +++ E I K +HPN+V+
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRL 93
Query: 251 VGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPII 310
++ + +V + G+L + + S + + + Y C + I+
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY---CHSNGIV 150
Query: 311 HCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYK 367
H +LKP+N+LL + G +K++ FGL ++ +A F + P Y++PE+ K
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT---PG--YLSPEVLK 203
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + + VD ++ G+ILY ++ G PF
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 136 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 188
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 189 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 243
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 244 VGTPGAELLKKISSESARNYIQSLTQM 270
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 130 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 182
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 183 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 237
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 238 VGTPGAELLKKISSESARNYIQSLTQM 264
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 142 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYV-- 194
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 195 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 249
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 250 VGTPGAELLKKISSESARNYIQSLTQM 276
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 143 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 195
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 196 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 250
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 251 VGTPGAELLKKISSESARNYIQSLTQM 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 19/262 (7%)
Query: 180 VPEYELNPLELQVRKADGITK-GSYQVAKWNGTK--VWVKILDKESHKDPERINAFTHEL 236
V E +L+ + ++ K G G V K T+ +KIL+K F E
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 237 TIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFAL-DLA 295
++ + A + +V++Y+ GDL + L K P + RF + ++
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 296 RGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFG-LLRLQYISPEKAKIVFPVSHI 354
++ +H+ +H D+KP N+LLD G ++++ FG L++ + + V+
Sbjct: 202 LAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMN----DDGTVQSSVAVG 254
Query: 355 DPANLYVAPEIYKNEE-----FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCE 409
P Y++PEI + E + D +S G+ +YEM+ G PF+ + E +
Sbjct: 255 TPD--YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 410 GKRPPLKIKARSYPPDLKELIE 431
+R + K+LI+
Sbjct: 313 EERFQFPSHVTDVSEEAKDLIQ 334
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 143 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 195
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 196 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 250
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 251 VGTPGAELLKKISSESARNYIQSLTQM 277
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 138 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 190
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 191 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 246 VGTPGAELLKKISSESARNYIQSLTQM 272
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 19/262 (7%)
Query: 180 VPEYELNPLELQVRKADGITK-GSYQVAKWNGTK--VWVKILDKESHKDPERINAFTHEL 236
V E +L+ + ++ K G G V K T+ +KIL+K F E
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 237 TIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFAL-DLA 295
++ + A + +V++Y+ GDL + L K P + RF + ++
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 296 RGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFG-LLRLQYISPEKAKIVFPVSHI 354
++ +H+ +H D+KP N+LLD G ++++ FG L++ + + V+
Sbjct: 186 LAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMN----DDGTVQSSVAVG 238
Query: 355 DPANLYVAPEIYKNEE-----FDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCE 409
P Y++PEI + E + D +S G+ +YEM+ G PF+ + E +
Sbjct: 239 TPD--YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 410 GKRPPLKIKARSYPPDLKELIE 431
+R + K+LI+
Sbjct: 297 EERFQFPSHVTDVSEEAKDLIQ 318
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 133 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 185
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 186 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 240
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 241 VGTPGAELLKKISSESARNYIQSLTQM 267
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 143 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 195
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 196 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 250
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 251 VGTPGAELLKKISSESARNYIQSLTQM 277
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 137 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 189
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 190 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 244
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 245 VGTPGAELLKKISSESARNYIQSLTQM 271
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 136 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 188
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 189 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 243
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 244 VGTPGAELLKKISSESARNYIQSLTQM 270
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKNE-EFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 133 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 185
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 186 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 240
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 241 VGTPGAELLKKISSESARNYIQSLTQM 267
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 150 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 202
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 203 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 257
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 258 VGTPGAELLKKISSESARNYIQSLTQM 284
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 142 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 194
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 195 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 249
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 250 VGTPGAELLKKISSESARNYIQSLTQM 276
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLAQM 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 198 ITKGSYQVA-----KWNGTKVWVKILD--KESHKDPERINAFTHELTIVEKARHPNVVQF 250
+ KG++ V K G + KI++ K S +D +++ E I K +HPN+V+
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRL 69
Query: 251 VGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPII 310
++ + +V + G+L + + S + + + Y C + I+
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY---CHSNGIV 126
Query: 311 HCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYK 367
H +LKP+N+LL + G +K++ FGL ++ +A F + P Y++PE+ K
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT---PG--YLSPEVLK 179
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + + VD ++ G+ILY ++ G PF
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 198 ITKGSYQVA-----KWNGTKVWVKILD--KESHKDPERINAFTHELTIVEKARHPNVVQF 250
+ KG++ V K G + KI++ K S +D +++ E I K +HPN+V+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRL 70
Query: 251 VGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPII 310
++ + +V + G+L + + S + + + Y C + I+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY---CHSNGIV 127
Query: 311 HCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYK 367
H +LKP+N+LL + G +K++ FGL ++ +A F + P Y++PE+ K
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT---PG--YLSPEVLK 180
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + + VD ++ G+ILY ++ G PF
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 127 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 179
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 180 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 235 VGTPGAELLKKISSESARNYIQSLTQM 261
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 151 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 203
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 204 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 258
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 259 VGTPGAELLKKISSESARNYIQSLTQM 285
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 128
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 129 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 181
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 182 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 236
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 237 VGTPGAELLKKISSESARNYIQSLTQM 263
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 212 KVWVKILDKE-----SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
KV +KI+ K S ++ + E+ I++K HP +++ IVLE
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLEL 95
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L + RL + + + + YLHE + IIH DLKP+N+LL + +
Sbjct: 96 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEE 152
Query: 327 ---LKISGFGLLRLQYISPEKAKIVFPVSHIDP---ANLYVAPEIY---KNEEFDRSVDA 377
+KI+ FG +KI+ S + Y+APE+ ++R+VD
Sbjct: 153 DCLIKITDFG----------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 378 YSFGLILYEMIEGVQPF 394
+S G+IL+ + G PF
Sbjct: 203 WSLGVILFICLSGYPPF 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 128 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 180
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 181 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 235
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 236 VGTPGAELLKKISSESARNYIQSLTQM 262
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 127 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 179
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 180 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 235 VGTPGAELLKKISSESARNYIQSLAQM 261
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 137 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 189
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 190 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 244
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 245 VGTPGAELLKKISSESARNYIQSLTQM 271
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 212 KVWVKILDKE-----SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
KV +KI+ K S ++ + E+ I++K HP +++ IVLE
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLEL 95
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L + RL + + + + YLHE + IIH DLKP+N+LL + +
Sbjct: 96 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEE 152
Query: 327 ---LKISGFGLLRLQYISPEKAKIVFPVSHIDP---ANLYVAPEIY---KNEEFDRSVDA 377
+KI+ FG +KI+ S + Y+APE+ ++R+VD
Sbjct: 153 DCLIKITDFG----------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 378 YSFGLILYEMIEGVQPF 394
+S G+IL+ + G PF
Sbjct: 203 WSLGVILFICLSGYPPF 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 140
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 141 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 193
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 194 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 248
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 249 VGTPGAELLKKISSESARNYIQSLAQM 275
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 154 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 206
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 207 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 261
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 262 VGTPGAELLKKISSESARNYIQSLTQM 288
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 128 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 180
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 181 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 235
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 236 VGTPGAELLKKISSESARNYIQSLTQM 262
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 212 KVWVKILDKE-----SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
KV +KI+ K S ++ + E+ I++K HP +++ IVLE
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLEL 95
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L + RL + + + + YLHE + IIH DLKP+N+LL + +
Sbjct: 96 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEE 152
Query: 327 ---LKISGFGLLRLQYISPEKAKIVFPVSHIDP---ANLYVAPEIY---KNEEFDRSVDA 377
+KI+ FG +KI+ S + Y+APE+ ++R+VD
Sbjct: 153 DCLIKITDFG----------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 378 YSFGLILYEMIEGVQPF 394
+S G+IL+ + G PF
Sbjct: 203 WSLGVILFICLSGYPPF 219
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 23/186 (12%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I++K HP +++ IVLE G+L + RL + + +
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYISPEKAKIVFPV 351
+ YLHE + IIH DLKP+N+LL + + +KI+ FG +KI+
Sbjct: 249 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFG----------HSKILGET 295
Query: 352 SHIDP---ANLYVAPEIY---KNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKL 405
S + Y+APE+ ++R+VD +S G+IL+ + G PF + +K
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 355
Query: 406 MCCEGK 411
GK
Sbjct: 356 QITSGK 361
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 133 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 185
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 186 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 240
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 241 VGTPGAELLKKISSESARNYIQSLTQM 267
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 154 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYV-- 206
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 207 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 261
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 262 VGTPGAELLKKISSESARNYIQSLTQM 288
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 212 KVWVKILDKE-----SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
KV +KI+ K S ++ + E+ I++K HP +++ IVLE
Sbjct: 36 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLEL 94
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L + RL + + + + YLHE + IIH DLKP+N+LL + +
Sbjct: 95 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEE 151
Query: 327 ---LKISGFGLLRLQYISPEKAKIVFPVSHIDP---ANLYVAPEIY---KNEEFDRSVDA 377
+KI+ FG +KI+ S + Y+APE+ ++R+VD
Sbjct: 152 DCLIKITDFG----------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 201
Query: 378 YSFGLILYEMIEGVQPF 394
+S G+IL+ + G PF
Sbjct: 202 WSLGVILFICLSGYPPF 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 151 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 203
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 204 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 258
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 259 VGTPGAELLKKISSESARNYIQSLAQM 285
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 137 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 189
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 190 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 244
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 245 VGTPGAELLKKISSESARNYIQSLAQM 271
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 23/186 (12%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E+ I++K HP +++ IVLE G+L + RL + + +
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ---LKISGFGLLRLQYISPEKAKIVFPV 351
+ YLHE + IIH DLKP+N+LL + + +KI+ FG +KI+
Sbjct: 263 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFG----------HSKILGET 309
Query: 352 SHIDP---ANLYVAPEIY---KNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKL 405
S + Y+APE+ ++R+VD +S G+IL+ + G PF + +K
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 369
Query: 406 MCCEGK 411
GK
Sbjct: 370 QITSGK 375
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 28/197 (14%)
Query: 212 KVWVKILDKE-----SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266
KV +KI+ K S ++ + E+ I++K HP +++ IVLE
Sbjct: 43 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLEL 101
Query: 267 HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ 326
G+L + RL + + + + YLHE + IIH DLKP+N+LL + +
Sbjct: 102 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEE 158
Query: 327 ---LKISGFGLLRLQYISPEKAKIVFPVSHIDP---ANLYVAPEIY---KNEEFDRSVDA 377
+KI+ FG +KI+ S + Y+APE+ ++R+VD
Sbjct: 159 DCLIKITDFG----------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 208
Query: 378 YSFGLILYEMIEGVQPF 394
+S G+IL+ + G PF
Sbjct: 209 WSLGVILFICLSGYPPF 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 150 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-- 202
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 203 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 257
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 258 VGTPGAELLKKISSESARNYIQSLAQM 284
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 17/261 (6%)
Query: 197 GITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ 256
G+ + + + T+V +K+LDK E +F +++ K H ++V G
Sbjct: 27 GVRREVGDYGQLHETEVLLKVLDKAHRNYSE---SFFEAASMMSKLSHKHLVLNYGVCFC 83
Query: 257 NIPMMIVLEYHAKGDLASYLQK-KGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLK 315
++V E+ G L +YL+K K ++ L A LA M++L E + +IH ++
Sbjct: 84 GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEE---NTLIHGNVC 140
Query: 316 PKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-EEFDRS 374
KNILL K ++L P + V P + +V PE +N + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLS--DPGISITVLPKDILQERIPWVPPECIENPKNLNLA 198
Query: 375 VDAYSFGLILYEMIEGV-QPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEEC 433
D +SFG L+E+ G +P + ++ + P K +L LI C
Sbjct: 199 TDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK------AAELANLINNC 252
Query: 434 WDPKPVIRPNFNEIIARLDRI 454
D +P RP+F II L+ +
Sbjct: 253 MDYEPDHRPSFRAIIRDLNSL 273
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 28/235 (11%)
Query: 195 ADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254
A G SY V +G K+ VK L + + EL +++ +H NV+ +
Sbjct: 63 AYGSVCSSYDVK--SGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVF 119
Query: 255 TQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPII 310
T + + L H G + + K +L+ V + RG+ Y+H II
Sbjct: 120 TPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---II 176
Query: 311 HCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-E 369
H DLKP N+ ++ +LKI FGL R + E V Y APEI N
Sbjct: 177 HRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV-------ATRWYRAPEIMLNWM 227
Query: 370 EFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKLMCCEGKRPPLKIKAR 420
++ +VD +S G I+ E++ G F H +++++L PP + +R
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT----PPASVISR 278
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 198 ITKGSYQVA-----KWNGTKVWVKILD--KESHKDPERINAFTHELTIVEKARHPNVVQF 250
+ KG++ V K G + KI++ K S +D +++ E I K +HPN+V+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRL 70
Query: 251 VGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPII 310
++ + +V + G+L + + S + + + Y C + I+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY---CHSNGIV 127
Query: 311 HCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYK 367
H +LKP+N+LL + G +K++ FGL ++ +A F + P Y++PE+ K
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT---PG--YLSPEVLK 180
Query: 368 NEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ + + VD ++ G+ILY ++ G PF
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 8/170 (4%)
Query: 228 RINAF-THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK 286
R+ F EL P +V GAV + + I +E G L +++ G L +
Sbjct: 92 RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR 151
Query: 287 VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILL-DNGGQLKISGFGLLRLQYISPEK- 344
L + G+ YLH + I+H D+K N+LL +G + + FG + P+
Sbjct: 152 ALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGL 206
Query: 345 AKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
K + +I ++APE+ + D VD +S ++ M+ G P+
Sbjct: 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 24/224 (10%)
Query: 237 TIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS---PSKVL-RFAL 292
++ + P +VQF GA+ + I +E + Y L P ++L + L
Sbjct: 73 VVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITL 132
Query: 293 DLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPVS 352
+ +N+L E IIH D+KP NILLD G +K+ FG+ ++V ++
Sbjct: 133 ATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGI---------SGQLVDSIA 181
Query: 353 HIDPANL--YVAPE----IYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLM 406
A Y+APE + +D D +S G+ LYE+ G P+ PK +L
Sbjct: 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY-PKWNSVFDQLT 240
Query: 407 CCEGKRPPL--KIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
PP + R + P + C RP + E++
Sbjct: 241 QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI FGL R + E V
Sbjct: 151 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXV-- 203
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 204 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 258
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 259 VGTPGAELLKKISSESARNYIQSLAQM 285
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 29/210 (13%)
Query: 244 HPNVVQFVGAVTQNIPMMIVLEYHAKG-DLASYLQKKGRLS--PSKVLRFALDLARGMNY 300
HP V++ + M+VLE DL Y+ +KG L PS+ + +
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCF-----FGQVVAA 151
Query: 301 LHECKPDPIIHCDLKPKNILLD-NGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANL 359
+ C ++H D+K +NIL+D G K+ FG L + P + D +
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--------YTDFDGTRV 203
Query: 360 YVAPE-IYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIK 418
Y PE I +++ +S G++LY+M+ G PF E +++ E P
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF-----ERDQEILEAELHFP----- 253
Query: 419 ARSYPPDLKELIEECWDPKPVIRPNFNEII 448
PD LI C PKP RP+ EI+
Sbjct: 254 -AHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 8/170 (4%)
Query: 228 RINAF-THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK 286
R+ F EL P +V GAV + + I +E G L +++ G L +
Sbjct: 108 RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR 167
Query: 287 VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILL-DNGGQLKISGFGLLRLQYISPEK- 344
L + G+ YLH + I+H D+K N+LL +G + + FG + P+
Sbjct: 168 ALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGL 222
Query: 345 AKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
K + +I ++APE+ + D VD +S ++ M+ G P+
Sbjct: 223 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 26/235 (11%)
Query: 193 RKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252
R A T G+ Q+ K T + V I K+ +DP N + + HPN+VQ
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAI--KKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQS 86
Query: 253 AVT-------QNIPMMIVLEY---HAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLH 302
++I + +V+EY +Y +++ P + F L R + LH
Sbjct: 87 YFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH 146
Query: 303 ECKPDPIIHCDLKPKNILLDNG-GQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYV 361
+ + H D+KP N+L++ G LK+ FG + +SP + + + S Y
Sbjct: 147 LPSVN-VCHRDIKPHNVLVNEADGTLKLCDFG--SAKKLSPSEPNVAYICS-----RYYR 198
Query: 362 APE-IYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPP----EEVVKLMCCEGK 411
APE I+ N+ + +VD +S G I EM+ G F E+V+++ C +
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253
>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker
Length = 437
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A + V+ LL G N+ + G T LH+AA EGH E+V LLLSK+AN + +
Sbjct: 216 LHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN 275
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKVPKTKR---TPMTVAN 176
+ G T G+V V ++L G V T R TP+ VA+
Sbjct: 276 KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVAS 319
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 68 ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 127
E++ L A G + V LL++ ++ N + G T LH+ A EGHV V +L+
Sbjct: 241 ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH 300
Query: 128 KANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV-PKTK 168
+DA R G T A +YGN+++ L A V KTK
Sbjct: 301 GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK 342
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 83 GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 142
G + V++LL G+ N ++ T LH+AA GH EV K LL KA ++A+ + T
Sbjct: 25 GHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL 84
Query: 143 ADAKYYGNVEVYNILKARGAK---VPKTKRTPMTVANPREVPEYELNPLELQVRKADGIT 199
A G+ + +L A TP+ +A E L LE + +A
Sbjct: 85 HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK 144
Query: 200 KGS---YQVAKWNGTKVWVKILDKESHKDPERINAFT 233
KG + AK+ +V +L++++H + N T
Sbjct: 145 KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLT 181
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 77 LFMACR-GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A R G V+ LL ++ N G T LHIAA EGHVE V LL K+A+
Sbjct: 84 LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT 143
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAK---VPKTKRTPMTVANPREVPEYELNPLELQV 192
+ G T A YG V V +L R A K TP+ VA V L+ ++L +
Sbjct: 144 KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVA----VHHNNLDIVKLLL 199
Query: 193 RKADGITKGSYQVAKWNG 210
+ GS WNG
Sbjct: 200 PRG-----GSPHSPAWNG 212
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 77 LFMACR-GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L MA R G + + LL + VN+ D +T LH AA GH +VKLLL AN +
Sbjct: 51 LHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLAT 110
Query: 136 RWGSTAAADAKYYGNVE-VYNILKARGAKVPKTKR--TPMTVA 175
G T A G+VE V +L+ ++ TK+ TP+ VA
Sbjct: 111 TAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVA 153
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLL 125
L A G V+ E LL + N+ +G T LH+A ++++VKLLL
Sbjct: 150 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLL 199
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 8/170 (4%)
Query: 228 RINAF-THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK 286
R+ F EL P +V GAV + + I +E G L +++ G L +
Sbjct: 106 RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR 165
Query: 287 VLRFALDLARGMNYLHECKPDPIIHCDLKPKNILL-DNGGQLKISGFGLLRLQYISPEK- 344
L + G+ YLH + I+H D+K N+LL +G + + FG + P+
Sbjct: 166 ALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGL 220
Query: 345 AKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
K + +I ++APE+ + D VD +S ++ M+ G P+
Sbjct: 221 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDL 294
E++++++ +H N+++ + N + ++ EY A+ DL Y+ K +S + F L
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQL 141
Query: 295 ARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ-----LKISGFGLLRLQYISPEKAKIVF 349
G+N+ H + +H DLKP+N+LL LKI FGL R I +
Sbjct: 142 INGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP------IR 192
Query: 350 PVSHIDPANLYVAPEI-YKNEEFDRSVDAYSFGLILYEMI 388
+H Y PEI + + SVD +S I EM+
Sbjct: 193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI +GL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 69 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 128 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 179
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPP 414
YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 180 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKTR 232
Query: 415 LKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 233 IRMGQYEFPNPEWSEVSEE 251
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 70 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 129 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 180
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPP 414
YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 181 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKTR 233
Query: 415 LKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 234 IRMGQYEFPNPEWSEVSEE 252
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 115 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 174 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 225
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPP 414
YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 226 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKTR 278
Query: 415 LKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 279 IRMGQYEFPNPEWSEVSEE 297
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
EL +++ +H NV+ + T ++ + ++ DL + ++ + LS V
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA-LSDEHVQF 135
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
L RG+ Y+H IIH DLKP N+ ++ +L+I FGL R E V
Sbjct: 136 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYV- 189
Query: 350 PVSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF 394
Y APEI N ++++VD +S G I+ E+++G F
Sbjct: 190 ------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 71 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 130 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 181
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPP 414
YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 182 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKTR 234
Query: 415 LKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 235 IRMGQYEFPNPEWSEVSEE 253
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDP----ERINAFTHELTIVEKARHPNVVQFVGAVTQ 256
G ++A GT++ + + K P E ++ F E+ I++ HPN+++
Sbjct: 23 GEVKIAVQKGTRI-----RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED 77
Query: 257 NIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
N + +V+E G+L + K S R D+ + Y H+ + H DLKP
Sbjct: 78 NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKP 134
Query: 317 KNILL---DNGGQLKISGFGL-LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
+N L LK+ FGL R + + K+ P YV+P++ + +
Sbjct: 135 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP--------YYVSPQVLEG-LYG 185
Query: 373 RSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEG 410
D +S G+++Y ++ G PF P + V L EG
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFS-APTDXEVMLKIREG 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 77 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 136 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 187
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPP 414
YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 188 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKTR 240
Query: 415 LKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 241 IRMGQYEFPNPEWSEVSEE 259
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 76 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 135 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 186
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPP 414
YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 187 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKTR 239
Query: 415 LKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 240 IRMGQYEFPNPEWSEVSEE 258
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 85 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 144 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 195
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPP 414
YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 196 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKTR 248
Query: 415 LKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 249 IRMGQYEFPNPEWSEVSEE 267
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 75 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 134 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 185
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPP 414
YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 186 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKTR 238
Query: 415 LKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 239 IRMGQYEFPNPEWSEVSEE 257
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 21/161 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 71 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 130 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 181
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
YVAPE+ E++D+S D +S G+I+Y ++ G PF+
Sbjct: 182 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 27/199 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 121 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 180 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 231
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPP 414
YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 232 --TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMKTR 284
Query: 415 LKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 285 IRMGQYEFPNPEWSEVSEE 303
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKG-RLSPSKVLRFALD 293
E++I+ ARH N++ + ++++ E+ + D+ + L+ +++ +
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ 110
Query: 294 LARGMNYLHECKPDPIIHCDLKPKNILLDN--GGQLKISGFGLLRLQYISPEKAKIVFPV 351
+ + +LH I H D++P+NI+ +KI FG R Q + +++F
Sbjct: 111 VCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR-QLKPGDNFRLLFT- 165
Query: 352 SHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVK 404
A Y APE+++++ + D +S G ++Y ++ G+ PF + +++++
Sbjct: 166 -----APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE 213
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 201 GSYQVAKWNGTKVWVKILDKESHKDP----ERINAFTHELTIVEKARHPNVVQFVGAVTQ 256
G ++A GT++ + + K P E ++ F E+ I++ HPN+++
Sbjct: 40 GEVKIAVQKGTRI-----RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED 94
Query: 257 NIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKP 316
N + +V+E G+L + K S R D+ + Y H+ + H DLKP
Sbjct: 95 NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKP 151
Query: 317 KNILL---DNGGQLKISGFGL-LRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD 372
+N L LK+ FGL R + + K+ P YV+P++ + +
Sbjct: 152 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP--------YYVSPQVLEG-LYG 202
Query: 373 RSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEG 410
D +S G+++Y ++ G PF P + V L EG
Sbjct: 203 PECDEWSAGVMMYVLLCGYPPFS-APTDXEVMLKIREG 239
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 31/201 (15%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV+E G+L S +Q +G + + +
Sbjct: 69 PHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + S
Sbjct: 128 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---------ETTSHNSLT 175
Query: 355 DPAN--LYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKR 412
+P YVAPE+ E++D+S D +S G+I+Y ++ G PF+ L G +
Sbjct: 176 EPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH-----GLAISPGMK 230
Query: 413 PPLKIKARSYP-PDLKELIEE 432
+++ +P P+ E+ EE
Sbjct: 231 TRIRMGQYEFPNPEWSEVSEE 251
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 123/284 (43%), Gaps = 43/284 (15%)
Query: 192 VRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFV 251
VR+ + G AK TK L H+ ER E I +HPN+V+
Sbjct: 38 VRRCVKVLAGQEYAAKIINTKK----LSARDHQKLER------EARICRLLKHPNIVRLH 87
Query: 252 GAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIH 311
++++ ++ + G+L + + S + + + + H+ ++H
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG---VVH 144
Query: 312 CDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN 368
DLKP+N+LL + G +K++ FGL ++ ++A F + P Y++PE+ +
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGL-AIEVEGEQQAWFGFAGT---PG--YLSPEVLRK 198
Query: 369 EEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKE 428
+ + + VD ++ G+ILY ++ G PF + + + +IKA +Y E
Sbjct: 199 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQ-----------QIKAGAYDFPSPE 247
Query: 429 LIEECWDPKPVIRPNFNEIIARLDRIVCNCSKQGWWKDTFKLPW 472
WD + P ++I ++ + N SK+ + K PW
Sbjct: 248 -----WD---TVTPEAKDLINKM--LTINPSKRITAAEALKHPW 281
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 152
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 153 IDFGSGAL------LKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE++ G + + + S + + LI C +P RP F EI
Sbjct: 205 CGDIPF--EHDEEII------GGQVFFRQRVSS---ECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 235 ELTIVEKARHPNVVQFVGA------------VTQNIPMMIVLEYHAKGDLASYLQKKGRL 282
E+ + K HP +V++ A + + + I ++ K +L ++ + +
Sbjct: 53 EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI 112
Query: 283 SP---SKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY 339
S L L +A + +LH ++H DLKP NI +K+ FGL+
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 169
Query: 340 ISPEKAKIVFPV----SHIDPAN--LYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQP 393
E+ ++ P+ H LY++PE + VD +S GLIL+E++ P
Sbjct: 170 QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YP 226
Query: 394 FHPKPPEEVVKLMCCEG-KRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
F + E V L K PPL + YP + ++++ P P+ RP II
Sbjct: 227 FSTQ-MERVRTLTDVRNLKFPPL--FTQKYPCEYV-MVQDMLSPSPMERPEAINII 278
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
VKI++K+ R+ F + + H NV++ + + +V E G + S
Sbjct: 43 VKIIEKQPGHIRSRV--FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS 100
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQL---KISG 331
++ K+ + + D+A +++LH I H DLKP+NIL ++ Q+ KI
Sbjct: 101 HIHKRRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICD 157
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANL--YVAPEIYK--NEE---FDRSVDAYSFGLIL 384
FGL ++ + + I P + P Y+APE+ + +EE +D+ D +S G+IL
Sbjct: 158 FGLGSGIKLNGDCSPISTP-ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
Query: 385 YEMIEGVQPF 394
Y ++ G PF
Sbjct: 217 YILLSGYPPF 226
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 152
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 153 IDFGSGAL------LKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 205 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 99 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 155
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 156 IDFGSGAL------LKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 207
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 208 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 184
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 185 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE++ G + + + S + + LI C +P RP F EI
Sbjct: 237 CGDIPF--EHDEEII------GGQVFFRQRVSS---ECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 156
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 157 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 209 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 157
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 158 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 210 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 184
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 185 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE++ G + + + S + + LI C +P RP F EI
Sbjct: 237 CGDIPF--EHDEEII------GGQVFFRQRVSS---ECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 185
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 186 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE++ G + + + S + + LI C +P RP F EI
Sbjct: 238 CGDIPF--EHDEEII------GGQVFFRQRVSS---ECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 185
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 186 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE++ G + + + S + + LI C +P RP F EI
Sbjct: 238 CGDIPF--EHDEEII------GGQVFFRQRVSS---ECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 196 DGITKGSYQVAK-----WNGTKVWVKILD--KESHKDPERINAFTHELTIVEKARHPNVV 248
+ I KG++ V + G + KI++ K S +D +++ E I +H N+V
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRLLKHSNIV 66
Query: 249 QFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDP 308
+ ++++ +V + G+L + + S + + + LH C
Sbjct: 67 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--LH-CHQMG 123
Query: 309 IIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEI 365
++H DLKP+N+LL + G +K++ FGL ++ ++A F + P Y++PE+
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGL-AIEVQGDQQAWFGFAGT---PG--YLSPEV 177
Query: 366 YKNEEFDRSVDAYSFGLILYEMIEGVQPF 394
+ E + + VD ++ G+ILY ++ G PF
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 157
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 158 IDFGSGAL------LKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 210 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 156
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 157 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 209 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 171
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 172 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 223
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 224 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 184
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 185 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 237 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 199
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 200 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 252 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 199
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 200 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 252 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 172
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 173 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 225 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 172
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 173 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 225 CGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 157
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 158 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 210 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
EL +++ +H NV+ + T ++ + ++ DL + ++ + LS V
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA-LSDEHVQF 135
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
L RG+ Y+H IIH DLKP N+ ++ +L+I FGL R E V
Sbjct: 136 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYV- 189
Query: 350 PVSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF 394
Y APEI N ++++VD +S G I+ E+++G F
Sbjct: 190 ------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 191
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 192 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 244 CGDIPF--EHDEEIIRGQVFFRQR---------VSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 172
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 173 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 225 CGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 204
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 205 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 256
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 257 CGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 171
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 172 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 223
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 224 CGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI F L R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI GL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 199
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 200 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 252 CGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVT-----QNIPMMIVLEYHAKGDLASYLQKKGRLSPSKVLR 289
EL +++ +H NV+ + T ++ + ++ DL + ++ + LS V
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA-LSDEHVQF 127
Query: 290 FALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVF 349
L RG+ Y+H IIH DLKP N+ ++ +L+I FGL R E V
Sbjct: 128 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYV- 181
Query: 350 PVSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF 394
Y APEI N ++++VD +S G I+ E+++G F
Sbjct: 182 ------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 179
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 180 IDFGSGAL------LKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 231
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 232 CGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI GL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPMM----IVLEYHAKGDLASYLQKKGRLSPSKVLRF 290
EL +++ +H NV+ + T + + L H G + + K +L+ V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 291 ALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFP 350
+ RG+ Y+H IIH DLKP N+ ++ +LKI GL R + E V
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYV-- 183
Query: 351 VSHIDPANLYVAPEIYKN-EEFDRSVDAYSFGLILYEMIEGVQPF----HPKPPEEVVKL 405
Y APEI N ++++VD +S G I+ E++ G F H + +++L
Sbjct: 184 -----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 406 MCCEGKRPPLKI---KARSYPPDLKEL 429
+ G KI AR+Y L ++
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQM 265
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 245 PNVVQFVGAVTQNI-----PMMIVLEYHAKGDLASYLQKKG--RLSPSKVLRFALDLARG 297
P++V+ V V +N+ ++IV E G+L S +Q +G + + +
Sbjct: 115 PHIVRIVD-VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEA 173
Query: 298 MNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISGFGLLRLQYISPEKAKIVFPVSHI 354
+ YLH I H D+KP+N+L + LK++ FG + + + P
Sbjct: 174 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE---TTSHNSLTTPCY-- 225
Query: 355 DPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFH 395
YVAPE+ E++D+S D +S G+I Y ++ G PF+
Sbjct: 226 --TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFY 264
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L+ +Q + L ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLSQVIQME--LDHERMS 129
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTS 179
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F ++ Y APE+ + +VD +S G+I+ EMI+G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L+ +Q + L ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLSQVIQME--LDHERMS 129
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTS 179
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F ++ Y APE+ + +VD +S G+I+ EMI+G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And
Its Functional Consequences
pdb|3C5R|B Chain B, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And
Its Functional Consequences
Length = 137
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 82 RGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTA 141
+GD+ VE LL GSD N D G T LH A GH++VV+LLL KA ++ +
Sbjct: 20 KGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79
Query: 142 AADAKYYGNVEVYNILKARGA 162
DA G+V++ +L + GA
Sbjct: 80 LHDAAKNGHVDIVKLLLSYGA 100
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 77 LFMAC-RGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L AC G +K VE LL + VN+ + LH AA GHV++VKLLLS A+ +A +
Sbjct: 47 LHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVN 106
Query: 136 RWG 138
+G
Sbjct: 107 IFG 109
Score = 33.9 bits (76), Expect = 0.20, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 105 GRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164
G T LHIA+ +G + V+ LL ++ + +D G T +A +G+++V +L A V
Sbjct: 10 GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 165 PKT 167
T
Sbjct: 70 NTT 72
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 185
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 186 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE++ +R + + LI C +P RP F EI
Sbjct: 238 CGDIPF--EHDEEIIGGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 184
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 185 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE++ +R + + LI C +P RP F EI
Sbjct: 237 CGDIPF--EHDEEIIGGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With
V-1
Length = 123
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 83 GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 142
GD+ V+D + +G DVN GR LH AA G +E+++ LL K A+I+A D+ T
Sbjct: 18 GDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPL 77
Query: 143 ADAKYYGNVEVYNILKARGAKVPKTKRTP 171
A Y G+V +L ++GA KT + P
Sbjct: 78 LSAVYEGHVSCVKLLLSKGAD--KTVKGP 104
Score = 42.7 bits (99), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 60 VQDELTVPENLDSTMQ-----LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAAC 114
V+D + E+++ T++ L + A G ++ +E LL +G+D+N+ D T L A
Sbjct: 23 VKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82
Query: 115 EGHVEVVKLLLSKKANIDARDRWGSTA 141
EGHV VKLLLSK A+ + G TA
Sbjct: 83 EGHVSCVKLLLSKGADKTVKGPDGLTA 109
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + H C ++H D+K +NIL+D N G+LK+
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 185
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 186 IDFGSGALL------KDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE++ +R + + LI C +P RP F EI
Sbjct: 238 CGDIPF--EHDEEIIGGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures
pdb|2MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, Minimized Average
Structure
pdb|2KXP|C Chain C, Solution Nmr Structure Of V-1 Bound To Capping Protein
(Cp)
Length = 118
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 83 GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 142
GD+ V+D + +G DVN GR LH AA G +E+++ LL K A+I+A D+ T
Sbjct: 13 GDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPL 72
Query: 143 ADAKYYGNVEVYNILKARGAKVPKTKRTP 171
A Y G+V +L ++GA KT + P
Sbjct: 73 LSAVYEGHVSCVKLLLSKGAD--KTVKGP 99
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 60 VQDELTVPENLDSTMQ-----LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAAC 114
V+D + E+++ T++ L + A G ++ +E LL +G+D+N+ D T L A
Sbjct: 18 VKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 77
Query: 115 EGHVEVVKLLLSKKANIDARDRWGSTA 141
EGHV VKLLLSK A+ + G TA
Sbjct: 78 EGHVSCVKLLLSKGADKTVKGPDGLTA 104
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 228 RINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLS---- 283
+ + F +EL I+ ++ + G +T + I+ EY + + + L
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 284 ---PSKVLRFAL-DLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQY 339
P +V++ + + +Y+H K I H D+KP NIL+D G++K+S FG +Y
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFG--ESEY 201
Query: 340 ISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRS--VDAYSFGLILYEMIEGVQPFHPK 397
+ +K K P PE + NE VD +S G+ LY M V PF K
Sbjct: 202 MVDKKIKGSRGTYEFMP------PEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255
Query: 398 PPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNF 444
+V+L ++ K YP D + + K NF
Sbjct: 256 IS--LVELF------NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNF 294
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 115/261 (44%), Gaps = 39/261 (14%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
K L H+ ER E I +HPN+V+ ++++ ++ + G+L
Sbjct: 46 TKKLSARDHQKLER------EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE 99
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDN---GGQLKISG 331
+ + S + + + + H+ ++H +LKP+N+LL + G +K++
Sbjct: 100 DIVAREYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLAD 156
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGV 391
FGL ++ ++A F + P Y++PE+ + + + + VD ++ G+ILY ++ G
Sbjct: 157 FGLA-IEVEGEQQAWFGFAGT---PG--YLSPEVLRKDPYGKPVDLWACGVILYILLVGY 210
Query: 392 QPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEIIARL 451
PF + + + +IKA +Y E WD + P ++I ++
Sbjct: 211 PPFWDEDQHRLYQ-----------QIKAGAYDFPSPE-----WD---TVTPEAKDLINKM 251
Query: 452 DRIVCNCSKQGWWKDTFKLPW 472
+ N SK+ + K PW
Sbjct: 252 --LTINPSKRITAAEALKHPW 270
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L+ +Q + L ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLSQVIQME--LDHERMS 129
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTS 179
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F ++ Y APE+ + +VD +S G I+ EMI+G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDL 272
V +K+L K + + E+ I HPN+++ + ++LEY +G+L
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
Query: 273 ASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGF 332
LQK + +LA + Y H K +IH D+KP+N+LL G+LKI+ F
Sbjct: 111 YKELQKSCTFDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADF 167
Query: 333 GLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQ 392
G + S + + + Y+ PE+ + + VD + G++ YE++ G
Sbjct: 168 G-WSVHAPSLRRKTMCGTLD-------YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNP 219
Query: 393 PF 394
PF
Sbjct: 220 PF 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 205 VAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVL 264
+ K +G KV +K L + + A+ EL +++ +H NV+ + T +
Sbjct: 44 IDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLDVFTPASSLRNFY 102
Query: 265 EYH-----AKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNI 319
+++ + DL + K S K+ + +G+ Y+H ++H DLKP N+
Sbjct: 103 DFYLVMPFMQTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNL 157
Query: 320 LLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-EEFDRSVDAY 378
++ +LKI FGL R + E V Y APE+ + ++++VD +
Sbjct: 158 AVNEDCELKILDFGLAR--HADAEMTGYVV-------TRWYRAPEVILSWMHYNQTVDIW 208
Query: 379 SFGLILYEMIEGVQPFHPK 397
S G I+ EM+ G F K
Sbjct: 209 SVGCIMAEMLTGKTLFKGK 227
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L+ +Q + L ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLSQVIQME--LDHERMS 129
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTS 179
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F ++ Y APE+ + +VD +S G I+ EMI+G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 246 NVVQFVGAVTQNIPMMIVLEYHAKGDLASYLQKKGRLSPSK---VLRFALDLARGMNYLH 302
N V + + + + I ++ K +L ++ ++ L + L + +A + +LH
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 303 ECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIVFPV----SHIDPAN 358
++H DLKP NI +K+ FGL+ E+ ++ P+ +H
Sbjct: 182 S---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVG 238
Query: 359 --LYVAPEIYKNEEFDRSVDAYSFGLILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLK 416
LY++PE + VD +S GLIL+E++ E V + + PL
Sbjct: 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS----TQMERVRIITDVRNLKFPL- 293
Query: 417 IKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
+ + YP + ++++ P P RP +II
Sbjct: 294 LFTQKYPQE-HMMVQDMLSPSPTERPEATDII 324
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 47/248 (18%)
Query: 227 ERINAFTHELTIVEKARHPNVVQF-------------VGAVTQNIPMMIVLEYHAKGDLA 273
E+++ E+ ++ H VV++ + AV + + I +EY G L
Sbjct: 44 EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLY 103
Query: 274 SYLQKKG-RLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGF 332
+ + + R + ++Y+H IIH DLKP NI +D +KI F
Sbjct: 104 DLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160
Query: 333 GLLRLQYISPEKAKI---VFP------VSHIDPANLYVAPEIYKNE-EFDRSVDAYSFGL 382
GL + + S + K+ P S I A +YVA E+ ++ +D YS G+
Sbjct: 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA-MYVATEVLDGTGHYNEKIDMYSLGI 219
Query: 383 ILYEMIEGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDL--------KELIEECW 434
I +EMI PF E V ++ L+ + +PPD K++I
Sbjct: 220 IFFEMI---YPF--STGMERVNIL------KKLRSVSIEFPPDFDDNKMKVEKKIIRLLI 268
Query: 435 DPKPVIRP 442
D P RP
Sbjct: 269 DHDPNKRP 276
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 30/189 (15%)
Query: 225 DPERINAFTHELTIVEKARHPNVVQF--------------VGAVTQNIPMMIVLEYHAKG 270
DP+ + E+ I+ + H N+V+ VG++T+ + IV EY +
Sbjct: 48 DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY-MET 106
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQ-LKI 329
DLA+ L+ +G L F L RG+ Y+H ++H DLKP N+ ++ LKI
Sbjct: 107 DLANVLE-QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKI 162
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANL---YVAPEIYKN-EEFDRSVDAYSFGLILY 385
FGL R+ + P + H+ + Y +P + + + +++D ++ G I
Sbjct: 163 GDFGLARI--MDPHYSH----KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216
Query: 386 EMIEGVQPF 394
EM+ G F
Sbjct: 217 EMLTGKTLF 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L+ +Q + L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLSQVIQME--LDHERMS 129
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTS 179
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F ++ Y APE+ + +VD +S G I+ EMI+G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWS|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWT|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWV|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWW|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWW|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWX|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Fnbp1 (Chimeric Peptide)
pdb|3TWX|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Fnbp1 (Chimeric Peptide)
Length = 165
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGR--TALHIAACEGHVEVVKLLLS 126
N ++ QLL A GDV+ V+ L S VN D++GR T LH AA V VV+ LL
Sbjct: 5 NSEADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ 63
Query: 127 KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEY 183
A++ A+D+ G +A YG+ EV +L GA V K TP+ A + +Y
Sbjct: 64 HGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK--GKY 121
Query: 184 ELNPLELQ 191
E+ L LQ
Sbjct: 122 EICKLLLQ 129
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L F A V VE LL G+DV++ D G LH A GH EV +LL+ A ++ D
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMT 173
W T +A G E+ +L GA K R T
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNT 143
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 41 NMRFSFGRQSSLDPIRRSPVQDELTVPENL-----------DSTMQLLFMACR-GDVKGV 88
N R GRQS+ P+ + + ++V E L + L AC G +
Sbjct: 34 NCRDIEGRQST--PLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVA 91
Query: 89 EDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 148
E L+ G+ VN DL T LH AA +G E+ KLLL A+ ++R G+T D
Sbjct: 92 ELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNT-PLDLVKD 150
Query: 149 GNVEVYNILKARGA 162
G+ ++ ++L+ A
Sbjct: 151 GDTDIQDLLRGDAA 164
>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 38 RRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSD 97
R ++ G ++ L+P PV D L GD + V LL G+D
Sbjct: 10 RNEQLKRWIGSETDLEP----PVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD 65
Query: 98 VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNIL 157
+N ++DG TALH A + +V++VK L+ ANI+ D G A G +++ L
Sbjct: 66 INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYL 125
Query: 158 KARGAKVPKTKR---TPMTV 174
++GA V TP+ +
Sbjct: 126 ISQGAHVGAVNSEGDTPLDI 145
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 105 GRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNIL 157
G TALH+AA +G+ EV+KLL+ + +++ +D G T A ++G E IL
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A +G + ++ L+ DVN D DG T LH AA G E ++L+ +++A +
Sbjct: 203 LHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN 262
Query: 136 RWGSTA--AADAKYYGNVE 152
+ G TA AD G +E
Sbjct: 263 KVGQTAFDVADEDILGYLE 281
>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1
Length = 167
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGR--TALHIAACEGHVEVVKLLLS 126
N ++ QLL A GDV+ V+ L S VN D++GR T LH AA V VV+ LL
Sbjct: 7 NSEADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ 65
Query: 127 KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEY 183
A++ A+D+ G +A YG+ EV +L GA V K TP+ A + +Y
Sbjct: 66 HGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK--GKY 123
Query: 184 ELNPLELQ 191
E+ L LQ
Sbjct: 124 EICKLLLQ 131
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L F A V VE LL G+DV++ D G LH A GH EV +LL+ A ++ D
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMT 173
W T +A G E+ +L GA K R T
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNT 145
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 41 NMRFSFGRQSSLDPIRRSPVQDELTVPENL-----------DSTMQLLFMACR-GDVKGV 88
N R GRQS+ P+ + + ++V E L + L AC G +
Sbjct: 36 NCRDIEGRQST--PLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVA 93
Query: 89 EDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 148
E L+ G+ VN DL T LH AA +G E+ KLLL A+ ++R G+T D
Sbjct: 94 ELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNT-PLDLVKD 152
Query: 149 GNVEVYNILKARGA 162
G+ ++ ++L+ A
Sbjct: 153 GDTDIQDLLRGDAA 166
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 16/190 (8%)
Query: 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLAS 274
VKI++K+ R+ F + + H NV++ + + +V E G + S
Sbjct: 43 VKIIEKQPGHIRSRV--FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS 100
Query: 275 YLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQL---KISG 331
++ K+ + + D+A +++LH I H DLKP+NIL ++ Q+ KI
Sbjct: 101 HIHKRRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICD 157
Query: 332 FGLLRLQYISPEKAKIVFPVSHIDPANL--YVAPEIYK--NEE---FDRSVDAYSFGLIL 384
F L ++ + + I P + P Y+APE+ + +EE +D+ D +S G+IL
Sbjct: 158 FDLGSGIKLNGDCSPISTP-ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
Query: 385 YEMIEGVQPF 394
Y ++ G PF
Sbjct: 217 YILLSGYPPF 226
>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo
Form)
pdb|3TWQ|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo
Form)
Length = 175
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGR--TALHIAACEGHVEVVKLLLS 126
N ++ QLL A GDV+ V+ L S VN D++GR T LH AA V VV+ LL
Sbjct: 9 NSEADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ 67
Query: 127 KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEY 183
A++ A+D+ G +A YG+ EV +L GA V K TP+ A + +Y
Sbjct: 68 HGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK--GKY 125
Query: 184 ELNPLELQ 191
E+ L LQ
Sbjct: 126 EICKLLLQ 133
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%)
Query: 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L F A V VE LL G+DV++ D G LH A GH EV +LL+ A ++ D
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMT 173
W T +A G E+ +L GA K R T
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNT 147
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 41 NMRFSFGRQSSLDPIRRSPVQDELTVPENL-----------DSTMQLLFMACR-GDVKGV 88
N R GRQS+ P+ + + ++V E L + L AC G +
Sbjct: 38 NCRDIEGRQST--PLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVA 95
Query: 89 EDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 148
E L+ G+ VN DL T LH AA +G E+ KLLL A+ ++R G+T D
Sbjct: 96 ELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNT-PLDLVKD 154
Query: 149 GNVEVYNILKARGAKVPKTKR 169
G+ ++ ++L+ A + K+
Sbjct: 155 GDTDIQDLLRGDAALLDAAKK 175
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 112/254 (44%), Gaps = 36/254 (14%)
Query: 160 RGAKVPKTK---RTPMTVANPREVPEYELNPLELQVRKADGITKGSYQV---AKWNGTKV 213
RG+KV + K + VA P + P+ P E+ I GS+ V AK +
Sbjct: 2 RGSKVSRDKDGSKVTTVVATPGQGPD---RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE 58
Query: 214 WVKILDKESHKDPERINAFTHELTIVEKARHPNVVQF------VGAVTQNIPMMIVLEYH 267
V I K+ +D N EL I+ K H N+V+ G + + +VL+Y
Sbjct: 59 LVAI--KKVLQDKRFKN---RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 113
Query: 268 AKGDLA---SYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-N 323
+ Y + K L V + L R + Y+H I H D+KP+N+LLD +
Sbjct: 114 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPD 170
Query: 324 GGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPE-IYKNEEFDRSVDAYSFGL 382
LK+ FG + Q + E VS I + Y APE I+ ++ S+D +S G
Sbjct: 171 TAVLKLCDFGSAK-QLVRGEPN-----VSXIC-SRYYRAPELIFGATDYTSSIDVWSAGC 223
Query: 383 ILYEMIEGVQPFHP 396
+L E++ G QP P
Sbjct: 224 VLAELLLG-QPIFP 236
>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q)
pdb|1MX4|B Chain B, Structure Of P18ink4c (F82q)
Length = 168
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 83 GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA-NIDARDRWGSTA 141
G + ++ LL +DVN D +G LH+AA EGH+ VV+ L+ A N+ R+ G TA
Sbjct: 81 GQLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTA 140
Query: 142 AADAKYYGNVEVYNILKARGA 162
A+ YG EV ++++A GA
Sbjct: 141 CDLARLYGRNEVVSLMQANGA 161
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+L A RGD++ + LL +VN+ + GRTAL + G+ E+ + LL + AN D +
Sbjct: 8 ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLK 66
Query: 135 DRWGSTAAADAKYYGNVEVYNIL 157
DR G DA G ++ L
Sbjct: 67 DRTGFAVIHDAARAGQLDTLQTL 89
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 205 VAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVL 264
+ K +G KV +K L + + A+ EL +++ +H NV+ + T +
Sbjct: 62 IDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLDVFTPASSLRNFY 120
Query: 265 EYH-----AKGDLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNI 319
+++ + DL + + S K+ + +G+ Y+H ++H DLKP N+
Sbjct: 121 DFYLVMPFMQTDLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNL 175
Query: 320 LLDNGGQLKISGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKN-EEFDRSVDAY 378
++ +LKI FGL R + E V Y APE+ + ++++VD +
Sbjct: 176 AVNEDCELKILDFGLAR--HADAEMTGYVV-------TRWYRAPEVILSWMHYNQTVDIW 226
Query: 379 SFGLILYEMIEGVQPFHPK 397
S G I+ EM+ G F K
Sbjct: 227 SVGCIMAEMLTGKTLFKGK 245
>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n)
pdb|1MX6|B Chain B, Structure Of P18ink4c (F92n)
Length = 168
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 88 VEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA-NIDARDRWGSTAAADAK 146
++ LL +DVN D +G LH+AA EGH+ VV+ L+ A N+ R+ G TA A+
Sbjct: 86 LQTLLENQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLAR 145
Query: 147 YYGNVEVYNILKARGA 162
YG EV ++++A GA
Sbjct: 146 LYGRNEVVSLMQANGA 161
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+L A RGD++ + LL +VN+ + GRTAL + G+ E+ + LL + AN D +
Sbjct: 8 ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLK 66
Query: 135 DRWGSTAAADAKYYGNVEVYNIL 157
DR G DA G ++ L
Sbjct: 67 DRTGFAVIHDAARAGFLDTLQTL 89
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L+ +Q + L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLSQVIQME--LDHERMS 129
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTS 179
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F ++ Y APE+ + +VD +S G I+ EMI+G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 216 KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKGDLASY 275
K L+ + K ++I E+ ++++ RH N+V + + +V E+ L
Sbjct: 57 KFLESDDDKMVKKIA--MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL 114
Query: 276 LQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLL 335
L V ++ + G+ + C IIH D+KP+NIL+ G +K+ FG
Sbjct: 115 ELFPNGLDYQVVQKYLFQIINGIGF---CHSHNIIHRDIKPENILVSQSGVVKLCDFGFA 171
Query: 336 RLQYISPEKAKIVFPVSHID---PANLYVAPEIYKNE-EFDRSVDAYSFGLILYEMIEGV 391
R + P D Y APE+ + ++ ++VD ++ G ++ EM G
Sbjct: 172 R---------TLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG- 221
Query: 392 QPFHPKPP--EEVVKLMCCEGKRPP 414
+P P +++ +M C G P
Sbjct: 222 EPLFPGDSDIDQLYHIMMCLGNLIP 246
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 38/239 (15%)
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEY---------HAKGDLASYLQKKGRLSPSKVL 288
+ E HPNV+++ + T + + I LE +K L+ + +P +L
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK-------------ISGFGLL 335
R +A G+ +LH K IIH DLKP+NIL+ + IS FGL
Sbjct: 140 R---QIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 336 RLQYISPEKAKIVFPVSHIDPANL--YVAPEIYKNE---EFDRSVDAYSFGLILYEMI-E 389
+ + + F + +P+ + APE+ + RS+D +S G + Y ++ +
Sbjct: 194 K----KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF K E + + RS + +LI + D P+ RP +++
Sbjct: 250 GKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 38/239 (15%)
Query: 238 IVEKARHPNVVQFVGAVTQNIPMMIVLEY---------HAKGDLASYLQKKGRLSPSKVL 288
+ E HPNV+++ + T + + I LE +K L+ + +P +L
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLK-------------ISGFGLL 335
R +A G+ +LH K IIH DLKP+NIL+ + IS FGL
Sbjct: 140 R---QIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 336 RLQYISPEKAKIVFPVSHIDPANL--YVAPEIYKNE---EFDRSVDAYSFGLILYEMI-E 389
+ + + F + +P+ + APE+ + RS+D +S G + Y ++ +
Sbjct: 194 K----KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
Query: 390 GVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEII 448
G PF K E + + RS + +LI + D P+ RP +++
Sbjct: 250 GKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L +Q + L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME--LDHERMS 129
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTS 179
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F ++ Y APE+ + +VD +S G I+ EMI+G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L +Q + L ++
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME--LDHERMS 130
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTS 180
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F ++ Y APE+ + +VD +S G I+ EMI+G
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L +Q + L ++
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME--LDHERMS 129
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTS 179
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F ++ Y APE+ + +VD +S G I+ EMI+G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 271 DLASYLQKKGRLSPSKVLRFALDLARGMNYLHECKPDPIIHCDLKPKNILLD-NGGQLKI 329
DL ++ ++G L F + + + C ++H D+K +NIL+D N G+LK+
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRH---CHNXGVLHRDIKDENILIDLNRGELKL 152
Query: 330 SGFGLLRLQYISPEKAKIVFPVSHIDPANLYVAPEIYKNEEFD-RSVDAYSFGLILYEMI 388
FG L V+ + D +Y PE + + RS +S G++LY+M+
Sbjct: 153 IDFGSGAL------LKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
Query: 389 EGVQPFHPKPPEEVVKLMCCEGKRPPLKIKARSYPPDLKELIEECWDPKPVIRPNFNEI 447
G PF + EE+++ +R + + LI C +P RP F EI
Sbjct: 205 CGDIPF--EHDEEIIRGQVFFRQR---------VSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6)
pdb|1IHB|B Chain B, Crystal Structure Of P18-Ink4c(Ink6)
Length = 162
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 83 GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA-NIDARDRWGSTA 141
G + ++ LL +DVN D +G LH+AA EGH+ VV+ L+ A N+ R+ G TA
Sbjct: 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTA 140
Query: 142 AADAKYYGNVEVYNILKARGA 162
A+ YG EV ++++A GA
Sbjct: 141 CDLARLYGRNEVVSLMQANGA 161
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+L A RGD++ + LL +VN+ + GRTAL + G+ E+ + LL + AN D +
Sbjct: 8 ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLK 66
Query: 135 DRWGSTAAADAKYYGNVEVYNIL 157
DR G DA G ++ L
Sbjct: 67 DRTGFAVIHDAARAGFLDTLQTL 89
>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures
pdb|1G3N|B Chain B, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|F Chain F, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 168
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 83 GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA-NIDARDRWGSTA 141
G + ++ LL +DVN D +G LH+AA EGH+ VV+ L+ A N+ R+ G TA
Sbjct: 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTA 140
Query: 142 AADAKYYGNVEVYNILKARGA 162
A+ YG EV ++++A GA
Sbjct: 141 CDLARLYGRNEVVSLMQANGA 161
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+L A RGD++ + LL +VN+ + GRTAL + G+ E+ + LL + AN D +
Sbjct: 8 ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLK 66
Query: 135 DRWGSTAAADAKYYGNVEVYNIL 157
DR G DA G ++ L
Sbjct: 67 DRTGFAVIHDAARAGFLDTLQTL 89
>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein
pdb|2RFM|B Chain B, Structure Of A Thermophilic Ankyrin Repeat Protein
Length = 192
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 91 LLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150
LL G++VN +L+G T L +A+ G E+VK LL A+I ARD G TA A A+ +G
Sbjct: 120 LLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGR 179
Query: 151 VEVYNIL 157
EV I
Sbjct: 180 QEVIKIF 186
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 77 LFMACRGDVKGV-EDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135
L A + + G+ E LL++GS+VN+ D G+T L + G+ E+ LL AN++ R+
Sbjct: 72 LIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRN 131
Query: 136 RWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTV-ANPREVPEYELNPLELQVRK 194
G T A YG E+ L GA + T +T A+ R E+ + +VR+
Sbjct: 132 LEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191
Query: 195 A 195
A
Sbjct: 192 A 192
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 60 VQDELTVPENLDSTMQL--------LFMACRGDVKGVEDLLNEGSD-VNSIDLDGRTALH 110
++DE ++ +NLD L +AC ++ D L E D + D++G TAL
Sbjct: 14 IKDEKSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALI 73
Query: 111 IAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTK-- 168
A + + + LLSK +N++ +D G T + +G E+ L GA V
Sbjct: 74 WAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLE 133
Query: 169 -RTPMTVANPREVPEYELNPLEL 190
TP+ VA+ E LEL
Sbjct: 134 GETPLIVASKYGRSEIVKKLLEL 156
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLL 124
NL+ L+ + G + V+ LL G+D+++ DL G TA A G EV+K+
Sbjct: 131 NLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF 186
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 235 ELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKGDLASYLQKKGRLSPSKVL 288
EL +++ H N++ + T + IV+E +L +Q + L ++
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME--LDHERMS 131
Query: 289 RFALDLARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKISGFGLLRLQYISPEKAKIV 348
+ G+ +LH IIH DLKP NI++ + LKI FGL R A
Sbjct: 132 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTS 181
Query: 349 FPVSHIDPANLYVAPEIYKNEEFDRSVDAYSFGLILYEMIEG 390
F + Y APE+ + +VD +S G I+ EMI+G
Sbjct: 182 FMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c
pdb|1MX2|B Chain B, Structure Of F71n Mutant Of P18ink4c
Length = 168
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 88 VEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA-NIDARDRWGSTAAADAK 146
++ LL +DVN D +G LH+AA EGH+ VV+ L+ A N+ R+ G TA A+
Sbjct: 86 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLAR 145
Query: 147 YYGNVEVYNILKARGA 162
YG EV ++++A GA
Sbjct: 146 LYGRNEVVSLMQANGA 161
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR 134
+L A RGD++ + LL +VN+ + GRTAL + G+ E+ + LL + AN D +
Sbjct: 8 ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLK 66
Query: 135 DRWGSTAAADAKYYGNVEVYNIL 157
DR G+ DA G ++ L
Sbjct: 67 DRTGNAVIHDAARAGFLDTLQTL 89
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,675,176
Number of Sequences: 62578
Number of extensions: 646328
Number of successful extensions: 4923
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 1627
Number of HSP's gapped (non-prelim): 1472
length of query: 473
length of database: 14,973,337
effective HSP length: 102
effective length of query: 371
effective length of database: 8,590,381
effective search space: 3187031351
effective search space used: 3187031351
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)