BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011994
MEKEKTKKNTEEVEEAADSIPNSKSNGNSSKGSNSASGGEDSEDKSSIFSLSHIKLNCRN
TVSKYDFVKVKVWLGDNADHYYVFSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLL
DVSQSDLEANLFKLMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQL
AQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEELVTEFVRECRIVRKGLAG
DLKKAMKDGKPIIIEGIHLDPSIYLMDDDSKAPATTTEKTNSESVPSDDNPVTQVESNSA
SVCVSDWENGNNSPEQPSTGGKISSEQVNKIADSLESIVLAGTSSENKGETPKDPGVDRN
TSVKKEKSGPDPIIIPIVLKMADFDHKALLEEWILTHTFGDKCLVQNKDELVSKLKTIQN
YLCSFKSQGVTVVNVSATTFPQTLDWLHGYLLQCIEKGISSVSNTNDKKPAEN

High Scoring Gene Products

Symbol, full name Information P value
AT5G61450 protein from Arabidopsis thaliana 4.6e-137
AT3G45090 protein from Arabidopsis thaliana 1.9e-07
AT5G60760 protein from Arabidopsis thaliana 4.5e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011994
        (473 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2163183 - symbol:AT5G61450 "AT5G61450" species...  1342  4.6e-137  1
TAIR|locus:2096865 - symbol:AT3G45090 species:3702 "Arabi...   119  1.9e-07   2
TAIR|locus:2159270 - symbol:AT5G60760 "AT5G60760" species...   115  4.5e-07   2


>TAIR|locus:2163183 [details] [associations]
            symbol:AT5G61450 "AT5G61450" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GO:GO:0016301 EMBL:AB016887
            IPI:IPI00533957 RefSeq:NP_200953.1 UniGene:At.8629
            ProteinModelPortal:Q9FII8 SMR:Q9FII8 PRIDE:Q9FII8
            EnsemblPlants:AT5G61450.1 GeneID:836266 KEGG:ath:AT5G61450
            InParanoid:Q9FII8 OMA:YLMNDEN ProtClustDB:CLSN2686920
            Genevestigator:Q9FII8 Uniprot:Q9FII8
        Length = 447

 Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
 Identities = 272/423 (64%), Positives = 321/423 (75%)

Query:    47 SIFSLSHIKLNCRNTVSKYDFVKVKVWLGDNADHYYVFSRFLLSRMLTVTKIPNHVXXXX 106
             +I S S +  + RN  SKYDFVKVKVWLGDNADHYYV SRFL+ RMLTVTKIPNH     
Sbjct:    34 NIRSFSSVPSSPRNASSKYDFVKVKVWLGDNADHYYVLSRFLVCRMLTVTKIPNHEAIKI 93

Query:   107 XXXXXXXXVDNSLLDVSQSDLEANLFKLMERRGYGEEYISRYRMMTRFHHQRVPLVILVC 166
                     +DNSLLDVSQSDLE NLFKLMERRGYGEEYI+RY MMT+FHHQRVPLVILVC
Sbjct:    94 SLELKKLLIDNSLLDVSQSDLETNLFKLMERRGYGEEYINRYNMMTKFHHQRVPLVILVC 153

Query:   167 GTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEELVTE 226
             GTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRT+TDAPL+S+PVW R F SSEEL+TE
Sbjct:   154 GTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTATDAPLTSTPVWTREFGSSEELITE 213

Query:   227 FVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLMDDDSKAPATTTEKTNSESVP 286
             F RECRIVRKGL GDLKKAMKDGKPIIIEG HLDPSIYLM+D++K P+   EK++SE+  
Sbjct:   214 FCRECRIVRKGLGGDLKKAMKDGKPIIIEGRHLDPSIYLMNDENKTPSNDPEKSSSETNS 273

Query:   287 SDDNPVTQVESNSASVCVSDWENGNNSPEQPSTGGK-ISSEQVNKIADSLESIVLAGTSS 345
             S D  +T  ++  AS   S+ +  +NS  +P +  + ++S + N +++ +    +   SS
Sbjct:   274 SKD--LTSDKNPEASS--SNTKETDNSAVKPHSHEEAVASVEANNLSEKVTQCTIDAESS 329

Query:   346 ENKGETPKDPGVDRNTSVKKEKSGPDPIIIPIVLKMADFDHKALLEEWILTHTFGDKCLV 405
               K    K    D +    K KSGP+PI+I IVLKM++FDHKALLEEWI + T G+K   
Sbjct:   330 --KDAEKKSKSADGSG---KTKSGPEPIVISIVLKMSEFDHKALLEEWISSRTSGEKYTT 384

Query:   406 QNKDELVSKLKTIQNYLCSFKSQGVTVVNVSATTFPQTLDWLHGYLLQCIEKGISSVSNT 465
             + KD L++ LKTI++YLCSF SQGVTVVN+SATTFPQTLDWLH YLLQ IE+GI S  N 
Sbjct:   385 KEKDRLITNLKTIEDYLCSFNSQGVTVVNISATTFPQTLDWLHNYLLQRIEEGIRSSENE 444

Query:   466 NDK 468
               K
Sbjct:   445 APK 447


>TAIR|locus:2096865 [details] [associations]
            symbol:AT3G45090 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0016301 eggNOG:COG2074
            EMBL:AY056298 EMBL:AY096678 IPI:IPI00530515 RefSeq:NP_566873.1
            UniGene:At.1043 ProteinModelPortal:Q93ZS1 SMR:Q93ZS1 PaxDb:Q93ZS1
            PRIDE:Q93ZS1 EnsemblPlants:AT3G45090.1 GeneID:823644
            KEGG:ath:AT3G45090 TAIR:At3g45090 HOGENOM:HOG000029439
            InParanoid:Q93ZS1 KO:K05715 OMA:SPENGKE PhylomeDB:Q93ZS1
            ProtClustDB:CLSN2689010 ArrayExpress:Q93ZS1 Genevestigator:Q93ZS1
            Uniprot:Q93ZS1
        Length = 717

 Score = 119 (46.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
 Identities = 29/104 (27%), Positives = 52/104 (50%)

Query:   134 LMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTD 193
             L E +  G +  +   +  R   ++  + +L+CGT+  GKST++  L  RL +  V+ TD
Sbjct:   132 LAEYKYVGRDQRADLILACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVVSTD 191

Query:   194 MVYELLRTSTDAPLSSSPV-WARNFSSSEELVTEFVRECRIVRK 236
              +  ++R+  D     +P+ WA  + + E L    V E +  RK
Sbjct:   192 SIRHMMRSFADE--KQNPLLWASTYHAGEYLDPVAVAESKAKRK 233

 Score = 80 (33.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
 Identities = 32/139 (23%), Positives = 66/139 (47%)

Query:   320 GGKISSEQVNKIADSLESIVLAGTSSENKGETPKDPGVDRNTSVKKEKSGPDPIIIPIVL 379
             G K  SE V    DSL+ ++   T+ E + E+    GV  + +         P I+P ++
Sbjct:   271 GYKAQSEMV---IDSLDRLI---TTWEERNESVVVEGVHLSLNFVMGLMKKHPSIVPFMV 324

Query:   380 KMADFDHKALLEEWILTHTFGDKCLVQNKD-ELVSKLKTIQNYLCSFKSQGVTVVNVSAT 438
              +A+ + K L E + +   +      +NK  + +  ++TIQ+YLC  ++    V  ++ T
Sbjct:   325 YIAN-EEKHL-ERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCK-RADKHLVPKINNT 381

Query:   439 TFPQTLDWLHGYLLQCIEK 457
                +++  +H  +  C+ +
Sbjct:   382 NVDKSVATIHATVFGCLRR 400

 Score = 45 (20.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
 Identities = 19/86 (22%), Positives = 34/86 (39%)

Query:   268 DDSKAPATTTEKTNSESVPSD----DNPVTQV-ESNSASVCVSDWENGNNSPEQPSTGGK 322
             DD +A    T   +  S  S     D P  ++ E  S +    D E G++   +P +   
Sbjct:   519 DDLRADIIETGSRHYSSCCSSPRTSDGPSKELMEEQSVNGSDEDDEEGDDDFHEPDSDED 578

Query:   323 ISSEQVNKIADSLESIVLAGTSSENK 348
             +S     +  D + S+    T S+ +
Sbjct:   579 LSDNNDERNRDEIGSVDEESTKSDEE 604


>TAIR|locus:2159270 [details] [associations]
            symbol:AT5G60760 "AT5G60760" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0010264 "myo-inositol hexakisphosphate
            biosynthetic process" evidence=IMP] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB015472 GO:GO:0016301 GO:GO:0010264
            eggNOG:COG2074 HOGENOM:HOG000029439 ProtClustDB:CLSN2689010
            EMBL:BT002943 EMBL:BT004378 IPI:IPI00530235 RefSeq:NP_200884.2
            UniGene:At.29145 ProteinModelPortal:Q9FJH9 SMR:Q9FJH9 PaxDb:Q9FJH9
            PRIDE:Q9FJH9 EnsemblPlants:AT5G60760.1 GeneID:836197
            KEGG:ath:AT5G60760 TAIR:At5g60760 InParanoid:Q9FJH9 OMA:CENGNTR
            PhylomeDB:Q9FJH9 ArrayExpress:Q9FJH9 Genevestigator:Q9FJH9
            Uniprot:Q9FJH9
        Length = 738

 Score = 115 (45.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
 Identities = 28/104 (26%), Positives = 52/104 (50%)

Query:   134 LMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTD 193
             L E +  G +  +   +  R   ++  + +L+CGT+  GKST++  L  RL +  V+ TD
Sbjct:   146 LAEYKYVGHDQRADLILSCRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVVSTD 205

Query:   194 MVYELLRTSTDAPLSSSPV-WARNFSSSEELVTEFVRECRIVRK 236
              +  ++R+  D     +P+ WA  + + E L    V E +  R+
Sbjct:   206 SIRHMMRSFVDE--KQNPLLWASTYHAGEYLDPVAVAESKARRR 247

 Score = 81 (33.6 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
 Identities = 34/147 (23%), Positives = 71/147 (48%)

Query:   313 SPEQPSTGG-KISSEQVNKIADSLESIVLAGTSSENKGETPKDPGVDRNTSVKKEKSGPD 371
             SP+Q +  G K  SE V    D+L+ ++   T+ E + E+    GV  + +         
Sbjct:   287 SPKQMAVEGFKAQSEMV---IDNLDRLI---TAWEERKESVIVEGVHLSLNFVMGLMKKH 340

Query:   372 PIIIPIVLKMADFDHKALLEEWILTHTFGDKCLVQNKD-ELVSKLKTIQNYLCSFKSQGV 430
             P I+P ++ +A+ + K L E + +   +      +NK  + +  ++TIQ+YLC  ++   
Sbjct:   341 PSIVPFMVYIAN-EEKHL-ERFAVRAKYMTLDPEKNKYVKYIRNIRTIQDYLCK-RADKH 397

Query:   431 TVVNVSATTFPQTLDWLHGYLLQCIEK 457
              V  ++ T   +++  +H  +  C+ +
Sbjct:   398 LVPKINNTNVDKSVAAIHATVFSCLRR 424


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      473       429   0.00085  118 3  11 23  0.45    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  273 KB (2144 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  44.37u 0.12s 44.49t   Elapsed:  00:00:02
  Total cpu time:  44.37u 0.12s 44.49t   Elapsed:  00:00:02
  Start:  Tue May 21 04:04:52 2013   End:  Tue May 21 04:04:54 2013

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