BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011994
(473 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TGY9|PGK2_METKA 2-phosphoglycerate kinase OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=pgk2 PE=3 SV=1
Length = 327
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 80 HYYV-FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERR 138
HY + FSR +L+R LT + H A +IAL++K+ L D + ++S +L + +E
Sbjct: 33 HYEMPFSRGVLARSLTAIGVEPHKAYEIALKIKEELQDEGIEEISTDELADIIRTKLEE- 91
Query: 139 GYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYEL 198
E RY + R + P+++L+ G + VG STIA+++ RL + NV+ TD + E+
Sbjct: 92 -IDETLAERYELWRRIKKREEPIIVLIGGASGVGTSTIASEVGHRLGITNVIGTDAIREV 150
Query: 199 LRTSTDAPL------SSSPVWAR-NFSSSEE-LVTEFVRECRIVRKGLAGDLKKAMKDGK 250
+R L SS W R + +E+ ++T F+ V G+ G + +++ +G
Sbjct: 151 MRRVLAEELYPTLYESSYTAWKRLRYEPAEDPVITGFLDHSEPVVVGIEGVVNRSINEGI 210
Query: 251 PIIIEGIHLDPSI 263
+I+EG+H+ P +
Sbjct: 211 HVIVEGVHIVPRL 223
>sp|O57882|PGK2_PYRHO 2-phosphoglycerate kinase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pgk2 PE=3 SV=1
Length = 301
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 21/225 (9%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEE 143
FSR +L+R +T I +A IA+E+++ LV V++ ++ ++ + +G+ EE
Sbjct: 15 FSRGILTRSITSVGIDVDLAYSIAIEVQEELVKKGKTIVTKDEIRKLTYQKLIEKGFKEE 74
Query: 144 YISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTST 203
RY RF +VPL+IL+ G VGKSTIAT+LA RL + +V+ TD + E+LR
Sbjct: 75 A-KRYIFWRRFRKMKVPLIILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKII 133
Query: 204 DAPL------SSSPVW--ARNFSSSEELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIE 255
L S+ W + + +V F + V G+ +++A+++G IIE
Sbjct: 134 TPELLPTIHTSTFLAWKELKGTVTDSPIVAGFESQVSAVTVGINAIIERAVREGLNAIIE 193
Query: 256 GIHLDPS----------IYLMDDDSK--APATTTEKTNSESVPSD 288
GIH+ P +Y++ S+ A E+T P+D
Sbjct: 194 GIHVVPGFVKVEGEMTFMYMLIARSREDLEARFYERTRYSKRPAD 238
>sp|Q8U4K7|PGK2_PYRFU 2-phosphoglycerate kinase OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=pgk2 PE=3 SV=1
Length = 302
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 9/192 (4%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEE 143
FSR +L+R +T + +A IA E+++ L+ V++ ++ ++ + +G+ EE
Sbjct: 15 FSRGILTRSITSVGVDVDLAYAIATEVQEELIRQGKKVVTKEEIRNITYQKLVEKGFKEE 74
Query: 144 YISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTST 203
RY RF ++PL+IL+ G VGKSTIAT+LA RL + +V+ TD + E++R
Sbjct: 75 A-KRYLFWRRFRKLKIPLIILLGGPTGVGKSTIATELAFRLGIRSVIGTDTIREVMRKII 133
Query: 204 DAPL------SSSPVWA--RNFSSSEELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIE 255
L S+ W R + ++ F + V G+ +++A+K+G IIE
Sbjct: 134 TPELLPTIHTSTFLAWKELRGTVTGSPIIAGFESQVNAVAVGVNAVIQRAIKEGLNAIIE 193
Query: 256 GIHLDPSIYLMD 267
GIHL P +D
Sbjct: 194 GIHLVPGFIKID 205
>sp|Q9V2C6|PGK2_PYRAB 2-phosphoglycerate kinase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pgk2 PE=3 SV=1
Length = 302
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEE 143
FSR +L+R +T I +A IA+E+++ L V++ ++ ++ + +G+ EE
Sbjct: 15 FSRGILTRSITSVGIDVDLAYSIAIEVQEELTRKGKSIVTKDEIRKLTYQKLVEKGFKEE 74
Query: 144 YISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTST 203
RY RF +VPL+IL+ G VGKSTIAT+LA RL + +V+ TD + E+LR
Sbjct: 75 A-KRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKVI 133
Query: 204 DAPL------SSSPVW--ARNFSSSEELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIE 255
L S+ W + +S ++ F + V G+ +++A ++G IIE
Sbjct: 134 TPELLPTIHTSTFLAWKEIKGTTSGSPIIAGFESQVSAVAVGVNAIIERAKREGLNAIIE 193
Query: 256 GIHLDPS 262
GIH+ P
Sbjct: 194 GIHVVPG 200
>sp|Q58877|PGK2_METJA 2-phosphoglycerate kinase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pgk2 PE=3 SV=1
Length = 309
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEE 143
FS+ +L+R LT + +A +IA ++ ++L ++ + ++DL ++ + + Y E
Sbjct: 18 FSKGILARSLTAAGLKPSIAYRIAWDIYEMLKKENIRVIDKADLRRRVYYYLISKNYDE- 76
Query: 144 YISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTST 203
+++ ++ R R P+VIL+ G + VG STIA ++A RL +P+V+ TD + E++R
Sbjct: 77 -VAKKYLLWRMVLGRRPIVILIGGASGVGTSTIAFEIASRLGIPSVIGTDSIREVMRKVI 135
Query: 204 DAPL------SSSPVW-ARNFSSSEELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIEG 256
L SS W + + F R V G+ G + + + +G+ +IIEG
Sbjct: 136 SRDLIPTLYESSYTAWKVLRDDEGNKYIKGFERHSEAVLTGVEGVIDRCLVEGQSVIIEG 195
Query: 257 IHLDPSI 263
HL P++
Sbjct: 196 THLVPTL 202
>sp|A6UQ76|PGK2_METVS 2-phosphoglycerate kinase OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=pgk2 PE=3 SV=1
Length = 313
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 74 LGDNADHYYVFSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFK 133
L + D+ FS+ LL+R LT + + +A E+++ L D L +S+ +L ++
Sbjct: 11 LVKDKDYEMPFSKGLLTRSLTAAGMKPSESYILAREIERDLTDQGLRKISKDELRRRVYY 70
Query: 134 LMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTD 193
+ R Y E I+ ++ R ++ ++ILV G + VG STIA +LA RL +P+V+ TD
Sbjct: 71 ALINRDY--EDIAEKYLLWRRVLKKHSIIILVGGASGVGTSTIAFELASRLGIPSVIGTD 128
Query: 194 MVYELLRTSTDAPL------SSSPVW-ARNFSSSEELVTE------FVRECRIVRKGLAG 240
+ E++R S L SS W A SS+EE T+ F R V G+
Sbjct: 129 SIREVMRRSISKDLVPMLYESSYTAWKALRHSSAEEYDTKEMHLLGFERHVEPVLIGIES 188
Query: 241 DLKKAMKDGKPIIIEGIHLDPSI 263
+ +++ +G +I+EG H+ P +
Sbjct: 189 IIDRSLTEGMSVILEGTHIVPGL 211
>sp|A6VH17|PGK2_METM7 2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=pgk2 PE=3 SV=1
Length = 312
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 104/196 (53%), Gaps = 21/196 (10%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERRGY--- 140
FS+ LL+R L+ + + +A E+++ L + ++L +S+ +L ++ + R Y
Sbjct: 21 FSKGLLARSLSAAGMKPSESYTLAREIERDLTEQNVLKISKDELRRRVYYTLINRDYEGI 80
Query: 141 GEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLR 200
GE+Y+ R++ ++ ++ILV G++ VG STIA +LA RL +P+V+ TD + E++R
Sbjct: 81 GEKYLLWRRVL-----KKHSIIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMR 135
Query: 201 TSTDAPL------SSSPVW-ARNFSSSEELVTE------FVRECRIVRKGLAGDLKKAMK 247
S L SS W A S EE T+ F R V G+ + +++
Sbjct: 136 RSISKDLVPMLYESSYTAWTALRRSQWEEQDTKGMHLLGFERHVEPVLLGIESIIDRSLT 195
Query: 248 DGKPIIIEGIHLDPSI 263
+G +IIEG H+ P +
Sbjct: 196 EGTSVIIEGTHIVPGL 211
>sp|A4FW93|PGK2_METM5 2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=pgk2 PE=3 SV=1
Length = 313
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 21/196 (10%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERRGY--- 140
FS+ LL+R LT + + +A E+++ L + ++L +S+ +L ++ + R Y
Sbjct: 21 FSKGLLARSLTAAGMKPSESYTLAREIERDLNEQNVLKISKDELRRRVYYTLINRDYEGI 80
Query: 141 GEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLR 200
GE+Y+ R++ + ++ILV G++ VG STIA +LA RL +P+V+ TD + E++R
Sbjct: 81 GEKYLLWRRVLKKH-----SIIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMR 135
Query: 201 TSTDAPL------SSSPVW-ARNFSSSEELVTE------FVRECRIVRKGLAGDLKKAMK 247
S L SS W A S +E T+ F R V G+ + +++
Sbjct: 136 RSISKDLVPMLYESSYTAWTALRRSQWDEQDTKEMHLLGFERHVEPVLLGIESIIDRSLT 195
Query: 248 DGKPIIIEGIHLDPSI 263
+G +IIEG H+ P +
Sbjct: 196 EGTSVIIEGTHIVPGL 211
>sp|Q6LXC1|PGK2_METMP 2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain S2 /
LL) GN=pgk2 PE=3 SV=1
Length = 312
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 15/193 (7%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEE 143
FS+ LL+R LT + + +A ++++ L + ++L +S+ +L ++ + R Y E
Sbjct: 20 FSKGLLARSLTAAGMKPSASYTLARDIERELNEQNVLKISKDELRRRVYYTLINRDY--E 77
Query: 144 YISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTST 203
I+ ++ R ++ ++ILV G++ VG STIA +LA RL +P+V+ TD + E++R S
Sbjct: 78 AIAEKYLLWRRILKKHSIIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSI 137
Query: 204 DAPL------SSSPVW-ARNFSSSEEL------VTEFVRECRIVRKGLAGDLKKAMKDGK 250
L SS W A SS EE + F R V G+ + +++ +G
Sbjct: 138 SKDLVPMLYESSYTAWTALRKSSWEEQDSKEMHLLGFERHVEPVLLGIESIIDRSLTEGT 197
Query: 251 PIIIEGIHLDPSI 263
+IIEG H+ P +
Sbjct: 198 SVIIEGTHIVPGL 210
>sp|A9A9N2|PGK2_METM6 2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=pgk2 PE=3 SV=1
Length = 313
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 21/196 (10%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERRGY--- 140
FS+ LL+R L+ + + +A E+++ L + ++L +S+ +L ++ + R Y
Sbjct: 21 FSKGLLARSLSAAGMKPSESYTLAREIERDLNEQNVLKISKDELRRRVYYTLINRDYEGI 80
Query: 141 GEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLR 200
GE+Y+ R++ + ++ILV G++ VG STIA +LA RL +P+V+ TD + E++R
Sbjct: 81 GEKYLLWRRVLKKH-----SIIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMR 135
Query: 201 TSTDAPL------SSSPVW-ARNFSSSEELVTE------FVRECRIVRKGLAGDLKKAMK 247
S L SS W A S +E T+ F R V G+ + +++
Sbjct: 136 RSISKDLVPMLYESSYTAWTALRRSPWDEQDTKEMHLLGFERHVEPVLLGIESIIDRSLT 195
Query: 248 DGKPIIIEGIHLDPSI 263
+G +I+EG H+ P +
Sbjct: 196 EGTSVILEGTHIVPGL 211
>sp|Q5JDW9|PGK2_PYRKO 2-phosphoglycerate kinase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pgk2 PE=3 SV=1
Length = 290
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEE 143
FSR +L+R +T+ I +A IA E++K L V+ ++ ++ + +G EE
Sbjct: 15 FSRGILTRSITLAGIDVGIAYAIATEVQKELEWKGKKSVTTEEIRELTYQKLLEKGLREE 74
Query: 144 YISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTST 203
RY ++V L +L+ G VGKSTIAT+LA RL + +++ TD + E++R
Sbjct: 75 -AKRYLFWRELRRRKVRLTVLLGGATGVGKSTIATELAFRLGIRSIIGTDTIREVMRKII 133
Query: 204 DAPL-----SSSPVWARNFSS---SEELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIE 255
L SS + R + S+ L+ F + + V G+ L++A ++G +IE
Sbjct: 134 AKELLPDIHVSSFLAERVVKAPKNSDPLIYGFETQVKHVSVGIKAVLERARREGLNTLIE 193
Query: 256 GIHLDPS 262
GIH+ P
Sbjct: 194 GIHVVPG 200
>sp|O27911|PGK2_METTH 2-phosphoglycerate kinase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pgk2 PE=3 SV=1
Length = 306
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 31/204 (15%)
Query: 84 FSRFLLSRMLTVTKI-PNHV---AIKIALELKK----LLVDNSLLDVSQSDLEANLFKLM 135
FS+ +L+R LT ++ PN A +I LKK L+ L+++ L
Sbjct: 17 FSKGVLARSLTRAEMDPNRAYTFASRIEAHLKKNKVDLITIEELVEIVSEHL-------- 68
Query: 136 ERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMV 195
R E +Y + + + PL+IL+ G + VG S+IA ++A RL + N++ TDM+
Sbjct: 69 --RKEDPEVAEKYMLWRKIRQCKEPLIILIGGASGVGTSSIAFEVANRLGIRNMISTDMI 126
Query: 196 YELLRTSTDAPLSSSPVWARNFSSSE-----------ELVTEFVRECRIVRKGLAGDLKK 244
E++R L S ++ ++++ + E++ F V G+ +++
Sbjct: 127 REVMRKIVSRELLPS-IYESSYTAYQSLRIPPPPELDEVLIGFRDHVESVSIGVEAVIER 185
Query: 245 AMKDGKPIIIEGIHLDPSIYLMDD 268
A+ +G I+IEG+H+ P ++ +D
Sbjct: 186 ALTEGISIVIEGVHIVPG-FIRED 208
>sp|Q49156|PGK2_METFV 2-phosphoglycerate kinase OS=Methanothermus fervidus (strain ATCC
43054 / DSM 2088 / JCM 10308 / V24 S) GN=pgk2 PE=1 SV=1
Length = 304
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 18/191 (9%)
Query: 84 FSRFLLSRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLF-KLMER-RGYG 141
FS+ +L+R LT + + A +A E++ L V+ +L ++ KL E+
Sbjct: 17 FSKGVLARSLTRSGMDPTDAYLLAAEVESYLKKEKKKIVTIDELVKIVYNKLKEKDEKIA 76
Query: 142 EEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRT 201
E+YI R+R + + PL++L+ G + VG S+IA ++A RL + N++ TDM+ E++R
Sbjct: 77 EKYI-RWRKIREYKE---PLILLIAGASGVGTSSIAFEVANRLGIRNMISTDMIREVMRK 132
Query: 202 STDAPLSSSPVWARNFSSS-----------EELVTEFVRECRIVRKGLAGDLKKAMKDGK 250
L S + F++ +E++ F +V G+ +++A+ +G
Sbjct: 133 MISKELIPS-LHESTFTAYKSLRTPAPVEFDEVLVGFRDHVNVVTVGIEAVIERALTEGI 191
Query: 251 PIIIEGIHLDP 261
I+IEG HL P
Sbjct: 192 SIVIEGAHLVP 202
>sp|Q8T1P1|Y3453_DICDI Uncharacterized protein DDB_G0273453/DDB_G0273565 OS=Dictyostelium
discoideum GN=DDB_G0273453 PE=4 SV=2
Length = 839
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 18/137 (13%)
Query: 143 EYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLR-- 200
+YI + + ++ IL+ GT+ GKST+ LA R+ V+ TD + +LLR
Sbjct: 237 QYIIDFPVSCEVQDKKHSFTILLGGTSGCGKSTLTALLASRIGFTAVISTDNIRQLLRKF 296
Query: 201 -TSTDAPLSSSPVWARNF-----------SSSEELVTEFVRECRIVRKGLAGDLKKAMKD 248
+ ++P+ +WA + S E+++ + + ++ L + K
Sbjct: 297 ISRQESPI----LWASTYHAGEIISNPSLSHKEKILQGYEAQNEMIFNKLDILIGHYEKR 352
Query: 249 GKPIIIEGIHLDPSIYL 265
+ +I+EG+HLD + L
Sbjct: 353 KESLIVEGVHLDTKLIL 369
>sp|B0V9Q9|KAD_ACIBY Adenylate kinase OS=Acinetobacter baumannii (strain AYE) GN=adk
PE=3 SV=1
Length = 217
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 161 LVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSS 220
+ I++ G GK T A + +R N+P + DM+ +R T+ L + V S
Sbjct: 1 MRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVS 60
Query: 221 EELVTEFVRE 230
+EL+ V+E
Sbjct: 61 DELIIGLVKE 70
>sp|A3M3G1|KAD_ACIBT Adenylate kinase OS=Acinetobacter baumannii (strain ATCC 17978 /
NCDC KC 755) GN=adk PE=3 SV=2
Length = 217
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 161 LVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSS 220
+ I++ G GK T A + +R N+P + DM+ +R T+ L + V S
Sbjct: 1 MRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVS 60
Query: 221 EELVTEFVRE 230
+EL+ V+E
Sbjct: 61 DELIIGLVKE 70
>sp|B0VSA9|KAD_ACIBS Adenylate kinase OS=Acinetobacter baumannii (strain SDF) GN=adk
PE=3 SV=1
Length = 217
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 161 LVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSS 220
+ I++ G GK T A + +R N+P + DM+ +R T+ L + V S
Sbjct: 1 MRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVS 60
Query: 221 EELVTEFVRE 230
+EL+ V+E
Sbjct: 61 DELIIGLVKE 70
>sp|B2HVT0|KAD_ACIBC Adenylate kinase OS=Acinetobacter baumannii (strain ACICU) GN=adk
PE=3 SV=1
Length = 217
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 161 LVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSS 220
+ I++ G GK T A + +R N+P + DM+ +R T+ L + V S
Sbjct: 1 MRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVS 60
Query: 221 EELVTEFVRE 230
+EL+ V+E
Sbjct: 61 DELIIGLVKE 70
>sp|B7I8U4|KAD_ACIB5 Adenylate kinase OS=Acinetobacter baumannii (strain AB0057) GN=adk
PE=3 SV=1
Length = 217
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 161 LVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSS 220
+ I++ G GK T A + +R N+P + DM+ +R T+ L + V S
Sbjct: 1 MRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVS 60
Query: 221 EELVTEFVRE 230
+EL+ V+E
Sbjct: 61 DELIIGLVKE 70
>sp|B7GXT4|KAD_ACIB3 Adenylate kinase OS=Acinetobacter baumannii (strain AB307-0294)
GN=adk PE=3 SV=1
Length = 217
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 161 LVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSS 220
+ I++ G GK T A + +R N+P + DM+ +R T+ L + V S
Sbjct: 1 MRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVS 60
Query: 221 EELVTEFVRE 230
+EL+ V+E
Sbjct: 61 DELIIGLVKE 70
>sp|A6VKH8|COAA_ACTSZ Pantothenate kinase OS=Actinobacillus succinogenes (strain ATCC
55618 / 130Z) GN=coaA PE=3 SV=1
Length = 317
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 109 ELKKLLVDNSLLDVSQ-SDLEANLFKLMERRGYGEEYISRYRMMTRF---HHQRVPLVIL 164
+LK LL N L + + S + L +L+ Y EE + R ++ RF H +VP +I
Sbjct: 41 DLKPLLGINEELSLDEVSTIYLPLVRLINY--YIEENLRRQTVLNRFLGGQHPKVPYIIS 98
Query: 165 VCGTACVGKSTIATQLAQRL-NLPNVLQTDMV 195
+ G+ VGKST A L L N P + D++
Sbjct: 99 IAGSVAVGKSTSARILQSLLANWPQARKVDLI 130
>sp|P74040|MIAA_SYNY3 tRNA dimethylallyltransferase OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=miaA PE=3 SV=1
Length = 303
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 158 RVPLVILVCGTACVGKSTIATQLAQRLN 185
+VP +I++CGT GKS +A LAQRLN
Sbjct: 3 KVPPLIVICGTTASGKSQLALDLAQRLN 30
>sp|B0UV22|COAA_HAES2 Pantothenate kinase OS=Haemophilus somnus (strain 2336) GN=coaA
PE=3 SV=1
Length = 317
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 140 YGEEYISRYRMMTRF---HHQRVPLVILVCGTACVGKSTIATQLAQRL-NLPNVLQTDMV 195
Y EE + R ++ RF H+ +VP +I + G+ VGKST A L L N P + D++
Sbjct: 69 YIEENLRRQTVLKRFLSGHNPKVPYIISIAGSVSVGKSTSARILQSLLANWPVARKVDLI 128
>sp|Q0I1U8|COAA_HAES1 Pantothenate kinase OS=Haemophilus somnus (strain 129Pt) GN=coaA
PE=3 SV=1
Length = 317
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 140 YGEEYISRYRMMTRF---HHQRVPLVILVCGTACVGKSTIATQLAQRL-NLPNVLQTDMV 195
Y EE + R ++ RF H+ +VP +I + G+ VGKST A L L N P + D++
Sbjct: 69 YIEENLRRQTVLKRFLSGHNPKVPYIISIAGSVSVGKSTSARILQSLLANWPVARKVDLI 128
>sp|Q6FD71|KAD_ACIAD Adenylate kinase OS=Acinetobacter sp. (strain ADP1) GN=adk PE=3
SV=1
Length = 219
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEE 222
I++ G GK T A + +R ++P + DM+ +R T+ L + V S+E
Sbjct: 3 IILLGPPGAGKGTQAQLICKRYDIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVSDE 62
Query: 223 LVTEFVRE 230
L+ V+E
Sbjct: 63 LIIGLVKE 70
>sp|Q7NJM6|PANCY_GLOVI Bifunctional pantoate ligase/cytidylate kinase OS=Gloeobacter
violaceus (strain PCC 7421) GN=panC/cmk PE=3 SV=1
Length = 515
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 155 HHQRVPLVILVCGTACVGKSTIATQLAQRLNL 186
HH+R P +I + G A GKST+A +LAQRL
Sbjct: 284 HHERRP-IIAIDGPAGAGKSTLARRLAQRLGF 314
>sp|B0JN42|MIAA_MICAN tRNA dimethylallyltransferase OS=Microcystis aeruginosa (strain
NIES-843) GN=miaA PE=3 SV=1
Length = 315
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 159 VPLVILVCGTACVGKSTIATQLAQRLN 185
+P++I++CG GKS++A QLA++ N
Sbjct: 6 LPILIVICGATATGKSSLALQLAEKFN 32
>sp|P57967|COAA_PASMU Pantothenate kinase OS=Pasteurella multocida (strain Pm70) GN=coaA
PE=3 SV=1
Length = 316
Score = 35.4 bits (80), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 140 YGEEYISRYRMMTRF---HHQRVPLVILVCGTACVGKSTIATQLAQRLN-LPNVLQTDMV 195
Y EE I R ++M RF + +VP +I + G+ VGKST A L L+ P + D++
Sbjct: 69 YIEERIQRQQVMNRFLGVNPDKVPYIISIAGSVAVGKSTSARILQSLLSQWPERRKVDLI 128
>sp|Q83E75|KAD_COXBU Adenylate kinase OS=Coxiella burnetii (strain RSA 493 / Nine Mile
phase I) GN=adk PE=3 SV=1
Length = 231
Score = 35.4 bits (80), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 159 VPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFS 218
+PL I++ G GK T A +A+ L++P + DM+ ++ T L +
Sbjct: 1 MPLRIILLGLPGAGKGTQADFIAKHLDIPKISTGDMLRAAVKAKTPLGLEVKKIMESGGL 60
Query: 219 SSEELVTEFVRE 230
S+E++ V+E
Sbjct: 61 VSDEIMIALVKE 72
>sp|A9NBU5|KAD_COXBR Adenylate kinase OS=Coxiella burnetii (strain RSA 331 / Henzerling
II) GN=adk PE=3 SV=1
Length = 231
Score = 35.4 bits (80), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 159 VPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFS 218
+PL I++ G GK T A +A+ L++P + DM+ ++ T L +
Sbjct: 1 MPLRIILLGLPGAGKGTQADFIAKHLDIPKISTGDMLRAAVKAKTPLGLEVKKIMESGGL 60
Query: 219 SSEELVTEFVRE 230
S+E++ V+E
Sbjct: 61 VSDEIMIALVKE 72
>sp|A9KED8|KAD_COXBN Adenylate kinase OS=Coxiella burnetii (strain Dugway 5J108-111)
GN=adk PE=3 SV=1
Length = 231
Score = 35.4 bits (80), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 159 VPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFS 218
+PL I++ G GK T A +A+ L++P + DM+ ++ T L +
Sbjct: 1 MPLRIILLGLPGAGKGTQADFIAKHLDIPKISTGDMLRAAVKAKTPLGLEVKKIMESGGL 60
Query: 219 SSEELVTEFVRE 230
S+E++ V+E
Sbjct: 61 VSDEIMIALVKE 72
>sp|B6J1M3|KAD_COXB2 Adenylate kinase OS=Coxiella burnetii (strain CbuG_Q212) GN=adk
PE=3 SV=1
Length = 231
Score = 35.4 bits (80), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 159 VPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFS 218
+PL I++ G GK T A +A+ L++P + DM+ ++ T L +
Sbjct: 1 MPLRIILLGLPGAGKGTQADFIAKHLDIPKISTGDMLRAAVKAKTPLGLEVKKIMESGGL 60
Query: 219 SSEELVTEFVRE 230
S+E++ V+E
Sbjct: 61 VSDEIMIALVKE 72
>sp|B6J8H9|KAD_COXB1 Adenylate kinase OS=Coxiella burnetii (strain CbuK_Q154) GN=adk
PE=3 SV=1
Length = 231
Score = 35.4 bits (80), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 159 VPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFS 218
+PL I++ G GK T A +A+ L++P + DM+ ++ T L +
Sbjct: 1 MPLRIILLGLPGAGKGTQADFIAKHLDIPKISTGDMLRAAVKAKTPLGLEVKKIMESGGL 60
Query: 219 SSEELVTEFVRE 230
S+E++ V+E
Sbjct: 61 VSDEIMIALVKE 72
>sp|B8ELE2|KAD_METSB Adenylate kinase OS=Methylocella silvestris (strain BL2 / DSM 15510
/ NCIMB 13906) GN=adk PE=3 SV=1
Length = 193
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 15/143 (10%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEE 222
++ G GK T +T+L Q+ N+P + DM+ ++ T L + + +E
Sbjct: 3 LVFLGPPGAGKGTQSTRLQQKFNIPQLSTGDMLRAAVKAGTPVGLKAKAIMDAGGLVPDE 62
Query: 223 LVTEFVRECRI---------VRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLMDDDSKAP 273
+V + + RI + G +K+A +I + + LD I L DD
Sbjct: 63 VVVGIIAD-RIDEPDAKEGFILDGFPRTVKQAEALADILIKKNMKLDAVIELKVDDKALL 121
Query: 274 ATTTEKTN-----SESVPSDDNP 291
A + E++ +DDNP
Sbjct: 122 ARIENRAQESLAKGETIRADDNP 144
>sp|A5FUH7|KCY_ACICJ Cytidylate kinase OS=Acidiphilium cryptum (strain JF-5) GN=cmk PE=3
SV=1
Length = 212
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 160 PLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYE 197
P+VI + G A GK T+A +LA NLP L T ++Y
Sbjct: 4 PIVIAIDGPAASGKGTLARRLAAAFNLP-YLDTGLLYR 40
>sp|B2IKW6|KCY_BEII9 Cytidylate kinase OS=Beijerinckia indica subsp. indica (strain ATCC
9039 / DSM 1715 / NCIB 8712) GN=cmk PE=3 SV=1
Length = 211
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 161 LVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYE 197
++I + G A GK T+A +LAQ NLP+ L T ++Y
Sbjct: 1 MIIAIDGPAASGKGTLARRLAQHFNLPH-LDTGLLYR 36
>sp|Q9UU88|KAD6_SCHPO Putative adenylate kinase fap7 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fap7 PE=3 SV=1
Length = 175
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYE 197
I++CGT GK+T+A Q+A+ L N+ D+V E
Sbjct: 11 IIICGTPGTGKTTLAEQVAETTELENICIGDVVKE 45
>sp|Q9Z8U0|KAD_CHLPN Adenylate kinase OS=Chlamydia pneumoniae GN=adk PE=3 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Query: 162 VILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSE 221
V ++ G GK T + LA R+ LP++ D++ ++R T L + +
Sbjct: 6 VFIIMGPPGSGKGTQSQYLANRIGLPHISTGDLLRAIIREGTPNGLKAKAYLDKGAFVPS 65
Query: 222 ELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLMDDDSKAPATTTEKTN 281
+ V E ++E ++ + + K + DG P ++ HL S +LMD S E +
Sbjct: 66 DFVWEILKE-KLQSQACS---KGCIIDGFPRTLDQAHLLDS-FLMDVHSNYTVIFLEISE 120
Query: 282 SE 283
E
Sbjct: 121 DE 122
>sp|Q65QG5|COAA_MANSM Pantothenate kinase OS=Mannheimia succiniciproducens (strain
MBEL55E) GN=coaA PE=3 SV=1
Length = 317
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 140 YGEEYISRYRMMTRF---HHQRVPLVILVCGTACVGKSTIATQLAQRL-NLPNVLQTDMV 195
Y EE + R +M RF + VP +I + G+ VGKST A L L N P + D++
Sbjct: 69 YIEENLRRQTVMNRFLGNTNANVPYIISIAGSVSVGKSTSARILQSLLSNWPENRKVDLI 128
>sp|A1AVD5|KAD_RUTMC Adenylate kinase OS=Ruthia magnifica subsp. Calyptogena magnifica
GN=adk PE=3 SV=1
Length = 216
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 34/68 (50%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEE 222
I++ G GK T AT + Q+ ++P + DM+ E ++ T + + V S++
Sbjct: 3 IILLGPPGAGKGTQATNICQKYSIPQISTGDMLREAVKADTPLGIEAKKVMDVGGLISDD 62
Query: 223 LVTEFVRE 230
++ V+E
Sbjct: 63 IIIGLVKE 70
>sp|Q6C2J1|GEM1_YARLI Mitochondrial Rho GTPase 1 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=GEM1 PE=3 SV=1
Length = 665
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNV---LQTDMVYELLRTSTDAPLSSSPVWARNFSS 219
I+VCG VGKS++ T L + +PN+ L + + +S DAPLS+ V FS+
Sbjct: 8 IVVCGDEGVGKSSLITSLIKDTYVPNIQKLLPPITIPKGFSSSPDAPLSTVIV-DTQFSN 66
Query: 220 SEELVTEFVRECR 232
S RE R
Sbjct: 67 SPAEAEHLHREIR 79
>sp|O65583|UKL4_ARATH Uridine kinase-like protein 4 OS=Arabidopsis thaliana GN=UKL4 PE=1
SV=2
Length = 469
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 22/124 (17%)
Query: 157 QRVPLVILVCGTACVGKSTIATQLAQRLNLPNV--LQTDMVYELLRTSTDAPLSSSPVWA 214
QR P VI V G A GK+T+ + Q+L+ V + D Y L T+ L+ V
Sbjct: 46 QRQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLINLDSFYHNL---TEEELAR--VHE 100
Query: 215 RNFSSSEELVTEFVREC-RIVRKGLAGDLKK---------AMKDGKP---IIIEGIHL-- 259
NF + TE + C +R+G A D+ K + P II+EGI L
Sbjct: 101 YNFDHPDAFDTEHLLSCMEKLRQGQAVDIPKYDFKTYRSSVFRRVNPTDVIILEGILLFH 160
Query: 260 DPSI 263
DP +
Sbjct: 161 DPRV 164
>sp|C3PP86|KAD_RICAE Adenylate kinase OS=Rickettsia africae (strain ESF-5) GN=adk PE=3
SV=1
Length = 212
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 161 LVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSS 220
++++ G GK T ++A+++NLP++ D+ +++TST S
Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKINLPHIAIGDIFRTIIKTST---------------SE 45
Query: 221 EELVTEFVRECRIV 234
EL+ +V++ ++
Sbjct: 46 AELINNYVKQGELI 59
>sp|Q71WG7|KAD_LISMF Adenylate kinase OS=Listeria monocytogenes serotype 4b (strain
F2365) GN=adk PE=3 SV=1
Length = 215
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEE 222
+++ G GK T A Q+ ++ N+P++ DM ++ +T+ A++F + +
Sbjct: 3 LVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGKK-----AKSFMDNGD 57
Query: 223 LVTEFVRECRIVRKGLAGDLKK--AMKDGKPIIIE 255
LV + V IVR+ LA D K + DG P +E
Sbjct: 58 LVPDEVTNG-IVRERLAEDDAKNGFLLDGFPRTVE 91
>sp|C1KZF9|KAD_LISMC Adenylate kinase OS=Listeria monocytogenes serotype 4b (strain
CLIP80459) GN=adk PE=3 SV=1
Length = 215
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEE 222
+++ G GK T A Q+ ++ N+P++ DM ++ +T+ A++F + +
Sbjct: 3 LVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGKK-----AKSFMDNGD 57
Query: 223 LVTEFVRECRIVRKGLAGDLKK--AMKDGKPIIIE 255
LV + V IVR+ LA D K + DG P +E
Sbjct: 58 LVPDEVTNG-IVRERLAEDDAKNGFLLDGFPRTVE 91
>sp|Q9JJ25|MEFV_RAT Pyrin OS=Rattus norvegicus GN=Mefv PE=2 SV=1
Length = 750
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 303 CVSDW-ENGNNSPEQPSTGGKISSEQVNKIADSLESIVLAGTSSENKGETPKDPGVDRNT 361
C + W ENGN PE P T G+ S + + DS VL + E +TP+DP
Sbjct: 318 CTASWTENGNGGPETPETLGETVS---SILCDSCSPKVLL-SLGEKLAQTPEDPASLGQA 373
Query: 362 SVKKEKSGPDPIIIPIVLKMADFDHKALLE 391
+ K D + P+ + KA ++
Sbjct: 374 ASKGRSR--DKVACPLCHTQGELPAKACVQ 401
>sp|Q927M8|KAD_LISIN Adenylate kinase OS=Listeria innocua serovar 6a (strain CLIP 11262)
GN=adk PE=3 SV=1
Length = 215
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEE 222
+++ G GK T A Q+ ++ N+P++ DM ++ +T+ A++F + +
Sbjct: 3 LVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGKK-----AKSFMDNGD 57
Query: 223 LVTEFVRECRIVRKGLAGDLKK--AMKDGKPIIIE 255
LV + V IVR+ LA D K + DG P +E
Sbjct: 58 LVPDEVTNG-IVRERLAEDDAKNGFLLDGFPRTVE 91
>sp|Q12PB0|KAD_SHEDO Adenylate kinase OS=Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013) GN=adk PE=3 SV=1
Length = 214
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEE 222
I++ G GK T A + Q+ +P + DM+ ++ T L + V S+E
Sbjct: 3 IILLGAPGAGKGTQAQFIMQQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDE 62
Query: 223 LVTEFVRE 230
L+ V+E
Sbjct: 63 LIIGLVKE 70
>sp|A8EZJ5|KAD_RICCK Adenylate kinase OS=Rickettsia canadensis (strain McKiel) GN=adk
PE=3 SV=1
Length = 212
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 161 LVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSS 220
++++ G GK T ++A+++N+P++ D+ +++TST S
Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKINVPHIAIGDIFRTIIKTST---------------SE 45
Query: 221 EELVTEFVRECRIV 234
EL+ +VR+ ++
Sbjct: 46 AELINNYVRQGELI 59
>sp|Q4KHK4|KAD_PSEF5 Adenylate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=adk PE=3 SV=1
Length = 215
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 163 ILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLSSSPVWARNFSSSEE 222
+++ G GK T A + ++ +P + DM+ ++ T+ L + V S++
Sbjct: 3 VILLGAPGAGKGTQAKFITEKFGIPQISTGDMLRAAVKAGTELGLKAKSVMDSGGLVSDD 62
Query: 223 LVTEFVRECRI-----VRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLMDDD 269
L+ V+E RI V L + + + ++ G+ LD + + DD
Sbjct: 63 LIINLVKE-RISQADCVNGFLFDGFPRTIPQAEALVKAGVELDNVVEIAVDD 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,862,949
Number of Sequences: 539616
Number of extensions: 7368387
Number of successful extensions: 26821
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 26542
Number of HSP's gapped (non-prelim): 336
length of query: 473
length of database: 191,569,459
effective HSP length: 121
effective length of query: 352
effective length of database: 126,275,923
effective search space: 44449124896
effective search space used: 44449124896
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)