BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011995
(473 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 153/294 (52%), Gaps = 18/294 (6%)
Query: 166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFIN 225
PL ++ A +NF I G+ +Y+ D A + K R SSQG++EF
Sbjct: 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK-----RRTPESSQGIEEFET 84
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP--PIDWNTR 283
++ TL+ +HP+L L+GF D ++ +LIY+ + +G+L R +YG SD P + W R
Sbjct: 85 EIETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQR 141
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD----I 339
++I + AA+GL +LH ++ + + NI +D++F K++ +G + E D
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 340 XXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399
E +G LT KS+V+SFG+VL E+L R + P+E NL +W+
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
++ +L I+DP L + ++ R D A++CL +RP+M + +L+
Sbjct: 259 S-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 156/294 (53%), Gaps = 18/294 (6%)
Query: 166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFIN 225
PL ++ A +NF I G+ +Y+ D A + K R SSQG++EF
Sbjct: 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK-----RRTPESSQGIEEFET 84
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP--PIDWNTR 283
++ TL+ +HP+L L+GF D ++ +LIY+ + +G+L R +YG SD P + W R
Sbjct: 85 EIETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQR 141
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIX 340
++I + AA+GL +LH ++ + + NI +D++F K++ +G + + +T +
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 341 XXXXXXXXXXX-ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399
E +G LT KS+V+SFG+VL E+L R + P+E NL +W+
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
++ +L I+DP L + ++ R D A++CL +RP+M + +L+
Sbjct: 259 S-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 17/299 (5%)
Query: 163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGV 220
+ F L E+ A NF + + G +Y+ D + V RL + G
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVA------VKRLKEERTQGGE 71
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG-PPID 279
+F +V ++ H NL +L GF +R+L+Y + +GS+ + R + PP+D
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI 339
W R +IAL +A+GL +LH+ + ++ + ANI +D++F A + +G A + D
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 340 XXXXXXXXXXXX---ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN--LV 394
E L G + K++V+ +G++LLEL+TG++ D + + L+
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
W + L + +L ++D L+G + + + +AL C Q P ERP M + L+
Sbjct: 250 DWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 17/299 (5%)
Query: 163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GV 220
+ F L E+ A NF + + G +Y+ D + V RL G
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVA------VKRLKEERXQGGE 79
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG-PPID 279
+F +V ++ H NL +L GF +R+L+Y + +GS+ + R + PP+D
Sbjct: 80 LQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLD 137
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI 339
W R +IAL +A+GL +LH+ + ++ + ANI +D++F A + +G A + D
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 197
Query: 340 XXXXXXXXXXXX---ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN--LV 394
E L G + K++V+ +G++LLEL+TG++ D + + L+
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
W + L + +L ++D L+G + + + +AL C Q P ERP M + L+
Sbjct: 258 DWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 147/286 (51%), Gaps = 26/286 (9%)
Query: 176 NFFSDRCIS-------EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDV 227
N F +R IS EG V+Y+ + KK A V + +++ +K+ F ++
Sbjct: 25 NNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV---DITTEELKQQFDQEI 81
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVK 285
+A QH NL +LLGF + DG D L+Y + +GSL DRL DG PP+ W+ R K
Sbjct: 82 KVMAKCQHENLVELLGF-SSDGDD-LCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK 137
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXX 342
IA AA G+ FLHE ++ + +ANI +D+ F+AK+S +G A +T +
Sbjct: 138 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 343 XXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402
RG +TPKS+++SFG+VLLE++TG +D +E + L+
Sbjct: 195 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQLLLDIKEEIED 252
Query: 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448
++ + +D ++ + + +A +CL ++ ++RP ++ +
Sbjct: 253 EEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 148/286 (51%), Gaps = 26/286 (9%)
Query: 176 NFFSDRCIS-------EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDV 227
N F +R IS EG V+Y+ + KK A V + +++ +K+ F ++
Sbjct: 25 NNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV---DITTEELKQQFDQEI 81
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVK 285
+A QH NL +LLGF + DG D L+Y + +GSL DRL DG PP+ W+ R K
Sbjct: 82 KVMAKCQHENLVELLGF-SSDGDD-LCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK 137
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXX 342
IA AA G+ FLHE ++ + +ANI +D+ F+AK+S +G A +T +
Sbjct: 138 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR 194
Query: 343 XXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402
RG +TPKS+++SFG+VLLE++TG +D +E + L+
Sbjct: 195 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQLLLDIKEEIED 252
Query: 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448
++ + +D ++ + + +A +CL ++ ++RP ++ +
Sbjct: 253 EEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 147/286 (51%), Gaps = 26/286 (9%)
Query: 176 NFFSDRCIS-------EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDV 227
N F +R IS EG V+Y+ + KK A V + +++ +K+ F ++
Sbjct: 19 NNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV---DITTEELKQQFDQEI 75
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVK 285
+A QH NL +LLGF + DG D L+Y + +GSL DRL DG PP+ W+ R K
Sbjct: 76 KVMAKCQHENLVELLGF-SSDGDD-LCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK 131
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXX 342
IA AA G+ FLHE ++ + +ANI +D+ F+AK+S +G A + +
Sbjct: 132 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR 188
Query: 343 XXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402
RG +TPKS+++SFG+VLLE++TG +D +E + L+
Sbjct: 189 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQLLLDIKEEIED 246
Query: 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448
++ + +D ++ + + +A +CL ++ ++RP ++ +
Sbjct: 247 EEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 119/228 (52%), Gaps = 26/228 (11%)
Query: 176 NFFSDRCIS-------EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDV 227
N F +R IS EG V+Y+ + KK A V + +++ +K+ F ++
Sbjct: 16 NNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMV---DITTEELKQQFDQEI 72
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVK 285
A QH NL +LLGF + DG D L+Y +GSL DRL DG PP+ W+ R K
Sbjct: 73 KVXAKCQHENLVELLGF-SSDGDD-LCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCK 128
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA----GHIPETDIXX 341
IA AA G+ FLHE ++ + +ANI +D+ F+AK+S +G A
Sbjct: 129 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 342 XXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDS-RHPK 388
E L RG +TPKS+++SFG+VLLE++TG +D R P+
Sbjct: 186 IVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 232
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 34/285 (11%)
Query: 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHP 236
SDR I +G V+Y + D A + + + L+ Q V+ F+ + + L HP
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQN--RIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 237 NLCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLT 295
N+ L+G +G +L Y + HG L + I P + + L A+G+
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPY--MCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGME 138
Query: 296 FLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------X 349
+L E+ + ++ + + N +D+ F+ K++ +G A I + +
Sbjct: 139 YLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT 195
Query: 350 XXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409
E+L+ T KS+VWSFG++L ELLT R RH + +L FLA RL
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRH-IDPFDLTH----FLAQGRRL-- 247
Query: 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
PQ P ++ + +C + +P+ RPT R + E+++
Sbjct: 248 ---PQ-----PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 40/264 (15%)
Query: 200 ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259
A+ +K + V + P S V+ F+ + N + +LQH L KL HA + +I E
Sbjct: 34 ATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL---HAVVTKEPIYIITEF 90
Query: 260 LFHGSL-DRLIYGRSDGPP----IDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTAN 314
+ GSL D L P ID++ ++ A+G+ F+ + ++ + AN
Sbjct: 91 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIEQR---NYIHRDLRAAN 141
Query: 315 IQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIV 371
I + K++ +G A I + + E + G T KS+VWSFGI+
Sbjct: 142 ILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL 201
Query: 372 LLELLT-GRKNLDSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVAD 429
L+E++T GR +P+ R L + R ++C + +
Sbjct: 202 LMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC------------------PEELYN 243
Query: 430 IALRCLQKEPSERPTMRSIFEELD 453
I +RC + P ERPT I LD
Sbjct: 244 IMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 32/260 (12%)
Query: 200 ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259
A+ +K + V + P S V+ F+ + N + +LQH L KL HA + +I E
Sbjct: 207 ATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL---HAVVTKEPIYIITEF 263
Query: 260 LFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID 318
+ GSL L + +SD G + + A+G+ F+ + ++ + ANI +
Sbjct: 264 MAKGSL--LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVS 318
Query: 319 KDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLEL 375
K++ +G A I + + E + G T KS+VWSFGI+L+E+
Sbjct: 319 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 376 LT-GRKNLDSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALR 433
+T GR +P+ R L + R ++C L +I +R
Sbjct: 379 VTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY------------------NIMMR 420
Query: 434 CLQKEPSERPTMRSIFEELD 453
C + P ERPT I LD
Sbjct: 421 CWKNRPEERPTFEYIQSVLD 440
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 27/273 (9%)
Query: 183 ISEGLSSVMYRASF-GDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKL 241
I G ++RA + G D + E ++ V EF+ +V + L+HPN+
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDF-----HAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
+G A ++ E L GSL RL++ +D R+ +A A+G+ +LH
Sbjct: 100 MG--AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 302 PFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX--XXXXETLERGLL 359
P ++ + N+ +DK ++ K+ +G + T + E L
Sbjct: 158 P-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419
KS+V+SFG++L EL T ++ + +P + V F + ++PQ
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG----FKCKRLEIPRNLNPQ----- 267
Query: 420 PLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
VA I C EP +RP+ +I + L
Sbjct: 268 -------VAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 200 ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259
A+ +K + V + P S V+ F+ + N + +LQH L KL HA + +I E
Sbjct: 201 ATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL---HAVVTKEPIYIITEF 257
Query: 260 LFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID 318
+ GSL L + +SD G + + A+G+ F+ + ++ + ANI +
Sbjct: 258 MAKGSL--LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVS 312
Query: 319 KDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT- 377
K++ +G A + I E + G T KS+VWSFGI+L+E++T
Sbjct: 313 ASLVCKIADFGLARVGAKFPIKWTAP-------EAINFGSFTIKSDVWSFGILLMEIVTY 365
Query: 378 GRKNLDSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQ 436
GR +P+ R L + R ++C + +I +RC +
Sbjct: 366 GRIPYPGMSNPEVIRALERGYRMPRPENC------------------PEELYNIMMRCWK 407
Query: 437 KEPSERPTMRSIFEELD 453
P ERPT I LD
Sbjct: 408 NRPEERPTFEYIQSVLD 424
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 27/273 (9%)
Query: 183 ISEGLSSVMYRASF-GDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKL 241
I G ++RA + G D + E ++ V EF+ +V + L+HPN+
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDF-----HAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
+G A ++ E L GSL RL++ +D R+ +A A+G+ +LH
Sbjct: 100 MG--AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 302 PFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX--XXXXETLERGLL 359
P ++ + + N+ +DK ++ K+ +G + + E L
Sbjct: 158 P-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419
KS+V+SFG++L EL T ++ + +P + V F + ++PQ
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG----FKCKRLEIPRNLNPQ----- 267
Query: 420 PLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
VA I C EP +RP+ +I + L
Sbjct: 268 -------VAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 35/266 (13%)
Query: 193 RASFGD-----DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR 247
+ SFG+ D T K + L + +++ ++ L+ P + K G + +
Sbjct: 32 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 91
Query: 248 DGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAM 306
D + +I E L GS LD L G P+D I +GL +LH E + +
Sbjct: 92 D--TKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKI 141
Query: 307 YNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX--XXXXETLERGLLTPKSN 364
+ + AN+ + + KL+ +G AG + +T I E +++ K++
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 201
Query: 365 VWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAA 424
+WS GI +EL G HP + L+ + P P L+G + +
Sbjct: 202 IWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNY----S 244
Query: 425 RTVADIALRCLQKEPSERPTMRSIFE 450
+ + + CL KEPS RPT + + +
Sbjct: 245 KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 193 RASFGD-----DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR 247
+ SFG+ D T K + L + +++ ++ L+ P + K G + +
Sbjct: 37 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 96
Query: 248 DGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAM 306
D + +I E L GS LD L G P+D I +GL +LH E + +
Sbjct: 97 D--TKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKI 146
Query: 307 YNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX--XXXXETLERGLLTPKSN 364
+ + AN+ + + KL+ +G AG + +T I E +++ K++
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 206
Query: 365 VWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAA 424
+WS GI +EL G HP + L+ + P P L+G + +
Sbjct: 207 IWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNY----S 249
Query: 425 RTVADIALRCLQKEPSERPTMRSIFE 450
+ + + CL KEPS RPT + + +
Sbjct: 250 KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 21/265 (7%)
Query: 187 LSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHA 246
+ V+ R +FG + + + S K FI ++ L+ + HPN+ KL G
Sbjct: 13 VEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG--- 69
Query: 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAM 306
+ L+ E GSL +++G P + L +QG+ +LH P +
Sbjct: 70 -ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 307 YNEFSTANIQIDKDFSA-KLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNV 365
+ + N+ + + K+ +G A I +T + E E + K +V
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKGSAAWMAPEVFEGSNYSEKCDV 187
Query: 366 WSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAAR 425
+S+GI+L E++T RK D R + W+ + + R P L P +
Sbjct: 188 FSWGIILWEVITRRKPFDEIGGPAFR--IMWA---VHNGTR------PPLIKNLP----K 232
Query: 426 TVADIALRCLQKEPSERPTMRSIFE 450
+ + RC K+PS+RP+M I +
Sbjct: 233 PIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 193 RASFGD-----DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR 247
+ SFG+ D T K + L + +++ ++ L+ P + K G + +
Sbjct: 17 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 76
Query: 248 DGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAM 306
D + +I E L GS LD L G P+D I +GL +LH E + +
Sbjct: 77 D--TKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKI 126
Query: 307 YNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX--XXXXETLERGLLTPKSN 364
+ + AN+ + + KL+ +G AG + +T I E +++ K++
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 365 VWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAA 424
+WS GI +EL G HP + L+ + P P L+G + +
Sbjct: 187 IWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNY----S 229
Query: 425 RTVADIALRCLQKEPSERPTMRSIFE 450
+ + + CL KEPS RPT + + +
Sbjct: 230 KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 35/266 (13%)
Query: 193 RASFGD-----DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR 247
+ SFG+ D T K + L + +++ ++ L+ P + K G + +
Sbjct: 17 KGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 76
Query: 248 DGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAM 306
D + +I E L GS LD L G P+D I +GL +LH E + +
Sbjct: 77 D--TKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKI 126
Query: 307 YNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX--XXXXETLERGLLTPKSN 364
+ + AN+ + + KL+ +G AG + +T I E +++ K++
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 365 VWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAA 424
+WS GI +EL G HP + L+ + P P L+G + +
Sbjct: 187 IWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNY----S 229
Query: 425 RTVADIALRCLQKEPSERPTMRSIFE 450
+ + + CL KEPS RPT + + +
Sbjct: 230 KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 21/265 (7%)
Query: 187 LSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHA 246
+ V+ R +FG + + + S K FI ++ L+ + HPN+ KL G
Sbjct: 12 VEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG--- 68
Query: 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAM 306
+ L+ E GSL +++G P + L +QG+ +LH P +
Sbjct: 69 -ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 307 YNEFSTANIQIDKDFSA-KLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNV 365
+ + N+ + + K+ +G A I +T + E E + K +V
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKGSAAWMAPEVFEGSNYSEKCDV 186
Query: 366 WSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAAR 425
+S+GI+L E++T RK D R + W+ + + R P L P +
Sbjct: 187 FSWGIILWEVITRRKPFDEIGGPAFR--IMWA---VHNGTR------PPLIKNLP----K 231
Query: 426 TVADIALRCLQKEPSERPTMRSIFE 450
+ + RC K+PS+RP+M I +
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 39/290 (13%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRL-NPSSQGVKEFINDVNTLASLQHPNLC 239
R + EG ++ A + + T K V L +P+ K+F + L +LQH ++
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-------DGPP------IDWNTRVKI 286
K G DG D ++++E + HG L++ + DG P + + + I
Sbjct: 81 KFYGV-CGDG-DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 287 ALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX 346
A A G+ +L + ++ + +T N + + K+ +G + + TD
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 347 XXXXX----ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402
E++ T +S+VWSFG++L E+ T K W + L+
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ-------------PWFQ--LS 240
Query: 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
+ + I ++ R P + V D+ L C Q+EP +R ++ I++ L
Sbjct: 241 NTEVIECITQGRVLER-PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ F
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ F
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 33 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ F
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 146
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 94 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ F
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 207
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 208 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 36 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ F
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 36 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ F
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 40 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ F
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 153
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 154 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 27 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 140
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 141 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 22/199 (11%)
Query: 191 MYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHAR 247
+YRA + D K R +P SQ ++ + A L+HPN+ L G +
Sbjct: 23 VYRAFWIGDEVAVKA-----ARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK 77
Query: 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMY 307
+ L+ E G L+R++ G+ P I N V+IA +G+ +LH+E ++
Sbjct: 78 E--PNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIA----RGMNYLHDEAIVPIIH 131
Query: 308 NEFSTANIQI-----DKDFS---AKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLL 359
+ ++NI I + D S K++ +G A T E + +
Sbjct: 132 RDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMF 191
Query: 360 TPKSNVWSFGIVLLELLTG 378
+ S+VWS+G++L ELLTG
Sbjct: 192 SKGSDVWSYGVLLWELLTG 210
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 33 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 146
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 32 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 145
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 146 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 34 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 34 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 30 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 143
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 144 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 54 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 167
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPN 237
+ I G +Y + D+ KK V LN + V +F+ + + HPN
Sbjct: 53 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 238 LCKLLGFHAR-DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
+ LLG R +GS +L Y + HG L I + P + + L A+G+ +
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMK--HGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 166
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXX------XX 350
L + + ++ + + N +D+ F+ K++ +G A + + +
Sbjct: 167 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLT 377
E+L+ T KS+VWSFG++L EL+T
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 49 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 105
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 106 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 161
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 162 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 222 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 263
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 264 RPTFDYLRSVLEDF 277
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 34 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 90
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 91 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 146
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 147 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 206
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 207 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 248
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 249 RPTFDYLRSVLEDF 262
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 47 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 103
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 104 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 159
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 160 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 219
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 220 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 261
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 262 RPTFDYLRSVLEDF 275
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 45 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 101
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 102 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 157
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 158 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 218 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 259
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 260 RPTFDYLRSVLEDF 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 45 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 101
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 102 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 157
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 158 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 218 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 259
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 260 RPTFDYLRSVLEDF 273
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 44 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 100
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 101 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 156
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 157 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 216
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 217 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 258
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 259 RPTFDYLRSVLEDF 272
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 95
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 96 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 151
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 152 DFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 212 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 253
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 254 RPTFDYLRSVLEDF 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 48 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 104
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 105 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 160
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 161 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 220
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 221 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 262
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 263 RPTFDYLRSVLEDF 276
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 38/287 (13%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK--EFINDVNTLASLQHPNL 238
R + +G ++Y + D + V +N S+ + EF+N+ + + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS---------DGPPIDWNTRVKIALC 289
+LLG ++ +++ E + HG L Y RS PP +++A
Sbjct: 83 VRLLGVVSK--GQPTLVVMELMAHGDLKS--YLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---- 345
A G+ +L+ + + ++ + + N + DF+ K+ +G I ETD
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E+L+ G+ T S++WSFG+VL E+ + L + L+++
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
L +MD + P V D+ C Q P+ RPT I L
Sbjct: 241 VLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 95
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 96 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 151
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 152 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 212 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 253
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 254 RPTFDYLRSVLEDF 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 41 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 97
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 98 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 153
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 154 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 213
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 214 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 255
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 256 RPTFDYLRSVLEDF 269
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 35 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 91
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ ANI + S K++
Sbjct: 92 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANILVSDTLSCKIA 147
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 148 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 207
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 208 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 249
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 250 RPTFDYLRSVLEDF 263
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 38/287 (13%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK--EFINDVNTLASLQHPNL 238
R + +G ++Y + D + V +N S+ + EF+N+ + + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS---------DGPPIDWNTRVKIALC 289
+LLG ++ +++ E + HG L Y RS PP +++A
Sbjct: 83 VRLLGVVSK--GQPTLVVMELMAHGDLKS--YLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---- 345
A G+ +L+ + + ++ + + N + DF+ K+ +G I ETD
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E+L+ G+ T S++WSFG+VL E+ + L + L+++
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
L +MD + P V D+ C Q P RPT I L
Sbjct: 241 VLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 95
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 96 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 151
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 152 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 212 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 253
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 254 RPTFDYLRSVLEDF 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 40 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 96
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 97 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 152
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 153 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 212
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 213 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 254
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 255 RPTFDYLRSVLEDF 268
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L S F+ + N + LQH L +L +A + +I E + +GSL
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLV 95
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
+ S G + N + +A A+G+ F+ E ++ + ANI + S K++
Sbjct: 96 DFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIA 151
Query: 327 GYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNL 382
+G A I + + E + G T KS+VWSFGI+L E++T GR
Sbjct: 152 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 383 DSR-HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE 441
+P+ +NL + R D+C L +L C ++ P +
Sbjct: 212 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL------------------CWKERPED 253
Query: 442 RPT---MRSIFEEL 452
RPT +RS+ E+
Sbjct: 254 RPTFDYLRSVLEDF 267
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 38/287 (13%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK--EFINDVNTLASLQHPNL 238
R + +G ++Y + D + V +N S+ + EF+N+ + + ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS---------DGPPIDWNTRVKIALC 289
+LLG ++ +++ E + HG L Y RS PP +++A
Sbjct: 82 VRLLGVVSK--GQPTLVVMELMAHGDLKS--YLRSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---- 345
A G+ +L+ + + ++ + + N + DF+ K+ +G I ETD
Sbjct: 138 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E+L+ G+ T S++WSFG+VL E+ + L + L+++
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 239
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
L +MD + P V D+ C Q P RPT I L
Sbjct: 240 VLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 38/287 (13%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK--EFINDVNTLASLQHPNL 238
R + +G ++Y + D + V +N S+ + EF+N+ + + ++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS---------DGPPIDWNTRVKIALC 289
+LLG ++ +++ E + HG L Y RS PP +++A
Sbjct: 80 VRLLGVVSK--GQPTLVVMELMAHGDLKS--YLRSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---- 345
A G+ +L+ + + ++ + + N + DF+ K+ +G I ETD
Sbjct: 136 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E+L+ G+ T S++WSFG+VL E+ + L + L+++
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 237
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
L +MD + P V D+ C Q P RPT I L
Sbjct: 238 VLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 103/253 (40%), Gaps = 28/253 (11%)
Query: 205 KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGS 264
+++ V + S EF + T+ L HP L K G +++ ++ E + +G
Sbjct: 32 QYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP--IYIVTEYISNGC 89
Query: 265 LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324
L L Y RS G ++ + +++ +G+ FL Q ++ + + N +D+D K
Sbjct: 90 L--LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVK 144
Query: 325 LSGYGCAGHIPETDIXXXXXX---XXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRK 380
+S +G ++ + E + KS+VW+FGI++ E+ + G+
Sbjct: 145 VSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM 204
Query: 381 NLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPS 440
D L + + L + + P A+ T+ I C + P
Sbjct: 205 PYD-----------------LYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPE 247
Query: 441 ERPTMRSIFEELD 453
+RPT + + ++
Sbjct: 248 KRPTFQQLLSSIE 260
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 38/287 (13%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK--EFINDVNTLASLQHPNL 238
R + +G ++Y + D + V +N S+ + EF+N+ + + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS---------DGPPIDWNTRVKIALC 289
+LLG ++ +++ E + HG L Y RS PP +++A
Sbjct: 83 VRLLGVVSK--GQPTLVVMELMAHGDLKS--YLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---- 345
A G+ +L+ + + ++ + + N + DF+ K+ +G I ETD
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E+L+ G+ T S++WSFG+VL E+ + L + L+++
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
L +MD + P V D+ C Q P RPT I L
Sbjct: 241 VLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 38/287 (13%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK--EFINDVNTLASLQHPNL 238
R + +G ++Y + D + V +N S+ + EF+N+ + + ++
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS---------DGPPIDWNTRVKIALC 289
+LLG ++ +++ E + HG L Y RS PP +++A
Sbjct: 84 VRLLGVVSK--GQPTLVVMELMAHGDLKS--YLRSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---- 345
A G+ +L+ + + ++ + N + DF+ K+ +G I ETD
Sbjct: 140 IADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E+L+ G+ T S++WSFG+VL E+ + L + L+++
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 241
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
L +MD + P V D+ C Q P+ RPT I L
Sbjct: 242 VLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 38/287 (13%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK--EFINDVNTLASLQHPNL 238
R + +G ++Y + D + V +N S+ + EF+N+ + + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS---------DGPPIDWNTRVKIALC 289
+LLG ++ +++ E + HG L Y RS PP +++A
Sbjct: 83 VRLLGVVSK--GQPTLVVMELMAHGDLKS--YLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---- 345
A G+ +L+ + + ++ + N + DF+ K+ +G I ETD
Sbjct: 139 IADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E+L+ G+ T S++WSFG+VL E+ + L + L+++
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
L +MD + P V D+ C Q P+ RPT I L
Sbjct: 241 VLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L P + V+ F+ + N + +LQH L +L R+ + +I E + GSL
Sbjct: 39 KVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE--EPIYIITEYMAKGSL- 95
Query: 267 RLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 325
L + +SD G + + + A+G+ ++ + ++ + AN+ + + K+
Sbjct: 96 -LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKI 151
Query: 326 SGYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT----- 377
+ +G A I + + E + G T KS+VWSFGI+L E++T
Sbjct: 152 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
Query: 378 --GRKNLD 383
GR N D
Sbjct: 212 YPGRTNAD 219
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
+ V L P + V+ F+ + N + +LQH L +L ++ + +I E + GSL
Sbjct: 38 KVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE--EPIYIITEFMAKGSL- 94
Query: 267 RLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 325
L + +SD G + + + A+G+ ++ + ++ + AN+ + + K+
Sbjct: 95 -LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKI 150
Query: 326 SGYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT----- 377
+ +G A I + + E + G T KSNVWSFGI+L E++T
Sbjct: 151 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
Query: 378 --GRKNLD 383
GR N D
Sbjct: 211 YPGRTNAD 218
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLI--YGRSDGPPIDWNTR 283
+ L L N ++GF+ SD + I E + GSLD+++ GR I
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQIL 106
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXX 343
K+++ +GLT+L E+ + M+ + +NI ++ KL +G +G + ++
Sbjct: 107 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 164
Query: 344 XXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403
E L+ + +S++WS G+ L+E+ GR + KE+ SRP +A
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED------SRPPMAI 218
Query: 404 DCRLSLIMD---PQL-KGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449
L I++ P+L G F L+ D +CL K P+ER ++ +
Sbjct: 219 FELLDYIVNEPPPKLPSGVFSLE----FQDFVNKCLIKNPAERADLKQLM 264
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 117/291 (40%), Gaps = 40/291 (13%)
Query: 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASL 233
HN R + EG ++ A + K V L +S K+F + L +L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP------------PIDWN 281
QH ++ K G D ++++E + HG L++ + R+ GP + +
Sbjct: 73 QHEHIVKFYGVCVE--GDPLIMVFEYMKHGDLNKFL--RAHGPDAVLMAEGNPPTELTQS 128
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+ IA A G+ +L + ++ + +T N + ++ K+ +G + + TD
Sbjct: 129 QMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 342 XXXXXXXXXX----ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397
E++ T +S+VWS G+VL E+ T K W
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ-------------PWY 232
Query: 398 RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448
+ L+++ + I ++ R P + V ++ L C Q+EP R ++ I
Sbjct: 233 Q--LSNNEVIECITQGRVLQR-PRTCPQEVYELMLGCWQREPHMRKNIKGI 280
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 56/276 (20%)
Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY-GR 272
N S +++ +++ N L + HP++ KL G ++DG +LI E +GSL + R
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP--LLLIVEYAKYGSLRGFLRESR 121
Query: 273 SDGP--------------------PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFST 312
GP + + A +QG+ +L E + ++ + +
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA 178
Query: 313 ANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSF 368
NI + + K+S +G + + E D E+L + T +S+VWSF
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 369 GIVLLELLT-GRKNLDSRHPKEERNLVK----WSRPFLADDCRLSLIMDPQLKGRFPLKA 423
G++L E++T G P+ NL+K RP D+C
Sbjct: 239 GVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP---DNC------------------ 277
Query: 424 ARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459
+ + + L+C ++EP +RP I ++L++ ++
Sbjct: 278 SEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 116/276 (42%), Gaps = 56/276 (20%)
Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY-GR 272
N S +++ +++ N L + HP++ KL G ++DG +LI E +GSL + R
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP--LLLIVEYAKYGSLRGFLRESR 121
Query: 273 SDGP--------------------PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFST 312
GP + + A +QG+ +L E + ++ + +
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA 178
Query: 313 ANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSF 368
NI + + K+S +G + + E D E+L + T +S+VWSF
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 369 GIVLLELLT-GRKNLDSRHPKEERNLVK----WSRPFLADDCRLSLIMDPQLKGRFPLKA 423
G++L E++T G P+ NL+K RP D+C
Sbjct: 239 GVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP---DNC------------------ 277
Query: 424 ARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459
+ + + L+C ++EP +RP I ++L++ ++
Sbjct: 278 SEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 56/276 (20%)
Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY-GR 272
N S +++ +++ N L + HP++ KL G ++DG +LI E +GSL + R
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP--LLLIVEYAKYGSLRGFLRESR 121
Query: 273 SDGP--------------------PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFST 312
GP + + A +QG+ +L E ++ + +
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MSLVHRDLAA 178
Query: 313 ANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSF 368
NI + + K+S +G + + E D E+L + T +S+VWSF
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 369 GIVLLELLT-GRKNLDSRHPKEERNLVK----WSRPFLADDCRLSLIMDPQLKGRFPLKA 423
G++L E++T G P+ NL+K RP D+C
Sbjct: 239 GVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP---DNC------------------ 277
Query: 424 ARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459
+ + + L+C ++EP +RP I ++L++ ++
Sbjct: 278 SEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK--EFINDVNTLASLQHPNL 238
R + +G ++Y + D + V +N S+ + EF+N+ + + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS---------DGPPIDWNTRVKIALC 289
+LLG ++ +++ E + HG L Y RS PP +++A
Sbjct: 83 VRLLGVVSK--GQPTLVVMELMAHGDLKS--YLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---- 345
A G+ +L+ + + ++ + + N + DF+ K+ +G I ET
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E+L+ G+ T S++WSFG+VL E+ + L + L+++
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
L +MD + P V D+ C Q P RPT I L
Sbjct: 241 VLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 207 EATVTRLNPSSQG--VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGS 264
+ V L P S G + + ++ L +L H N+ K G DG + LI E L GS
Sbjct: 52 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111
Query: 265 LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324
L Y + I+ ++K A+ +G+ +L G Q ++ + + N+ ++ + K
Sbjct: 112 LKE--YLPKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVK 166
Query: 325 LSGYGCAGHIPETDIXXXXXXXXX------XXXETLERGLLTPKSNVWSFGIVLLELLT 377
+ +G I ETD E L + S+VWSFG+ L ELLT
Sbjct: 167 IGDFGLTKAI-ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 207 EATVTRLNPSSQG--VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGS 264
+ V L P S G + + ++ L +L H N+ K G DG + LI E L GS
Sbjct: 40 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 99
Query: 265 LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324
L Y + I+ ++K A+ +G+ +L G Q ++ + + N+ ++ + K
Sbjct: 100 LKE--YLPKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVK 154
Query: 325 LSGYGCAGHIPETDIXXXXXXXXX------XXXETLERGLLTPKSNVWSFGIVLLELLT 377
+ +G I ETD E L + S+VWSFG+ L ELLT
Sbjct: 155 IGDFGLTKAI-ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 32/271 (11%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I +G S +Y A D +T + E + ++N Q KE I N++ + ++PN+
Sbjct: 28 IGQGASGTVYTAM---DVATGQ--EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
L + D+ ++ E L GSL ++ +D + Q L FLH
Sbjct: 83 LDSYLV--GDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN- 135
Query: 302 PFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXXXETLERGLL 359
Q ++ + + NI + D S KL+ +G CA PE + E + R
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 193
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419
PK ++WS GI+ +E++ G + +P L+ + P+L+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-------------PELQN-- 238
Query: 420 PLKAARTVADIALRCLQKEPSERPTMRSIFE 450
P K + D RCL+ + +R + + + +
Sbjct: 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 167 LDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-GVKEFIN 225
L++V + + + EG + + + TS K +L+ SSQ ++EF++
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 226 DVNTLASLQHPNLCKLLGF---HARDGSDQRMLIYERLFHGSLD-RLIYGRSDGPP--ID 279
+ + HPN+ +LLG + G + M+I + +G L L+Y R + P I
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI 339
T +K + A G+ +L ++ + + N + D + ++ +G + I D
Sbjct: 146 LQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 340 XXXXXXXXX----XXXETLERGLLTPKSNVWSFGIVLLELLT 377
E+L + T KS+VW+FG+ + E+ T
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 32/271 (11%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I +G S +Y A D +T + E + ++N Q KE I N++ + ++PN+
Sbjct: 29 IGQGASGTVYTAM---DVATGQ--EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
L + D+ ++ E L GSL ++ +D + Q L FLH
Sbjct: 84 LDSYLV--GDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN- 136
Query: 302 PFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXXXETLERGLL 359
Q ++ + + NI + D S KL+ +G CA PE + E + R
Sbjct: 137 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 194
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419
PK ++WS GI+ +E++ G + +P L+ + P+L+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-------------PELQN-- 239
Query: 420 PLKAARTVADIALRCLQKEPSERPTMRSIFE 450
P K + D RCL+ + +R + + + +
Sbjct: 240 PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I +G S +Y A D +T + E + ++N Q KE I N++ + ++PN+
Sbjct: 28 IGQGASGTVYTAM---DVATGQ--EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
L + D+ ++ E L GSL ++ +D + Q L FLH
Sbjct: 83 LDSYLV--GDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN- 135
Query: 302 PFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXXXETLERGLL 359
Q ++ + + NI + D S KL+ +G CA PE + E + R
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 193
Query: 360 TPKSNVWSFGIVLLELLTG 378
PK ++WS GI+ +E++ G
Sbjct: 194 GPKVDIWSLGIMAIEMIEG 212
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I +G S +Y A D +T + E + ++N Q KE I N++ + ++PN+
Sbjct: 28 IGQGASGTVYTAM---DVATGQ--EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
L + D+ ++ E L GSL ++ +D + Q L FLH
Sbjct: 83 LDSYLV--GDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN- 135
Query: 302 PFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXXXETLERGLL 359
Q ++ + + NI + D S KL+ +G CA PE + E + R
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY 193
Query: 360 TPKSNVWSFGIVLLELLTG 378
PK ++WS GI+ +E++ G
Sbjct: 194 GPKVDIWSLGIMAIEMIEG 212
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 28/189 (14%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX--XX 349
+GL +LH E + ++ + AN+ + + KL+ +G AG + +T I
Sbjct: 131 KGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 350 XXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409
E +++ K+++WS GI +EL G HP L+ + P
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---------- 237
Query: 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE-ELDRQESRKSSSST---- 464
P L G F ++ + CL K+PS RPT + + + + + S+K+S T
Sbjct: 238 ---PTLVGDF----TKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELID 290
Query: 465 -VRRASVEG 472
+R EG
Sbjct: 291 RFKRWKAEG 299
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 34/246 (13%)
Query: 210 VTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLI 269
+ L P + + F+ + + L+H L +L +A + ++ E + GSL +
Sbjct: 296 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFL 352
Query: 270 YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329
G + G + V +A A G+ ++ ++ + ANI + ++ K++ +G
Sbjct: 353 KGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 408
Query: 330 CAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSR 385
A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 409 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468
Query: 386 HPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPSER 442
+E ++D +G R P + ++ D+ +C +KEP ER
Sbjct: 469 VNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 508
Query: 443 PTMRSI 448
PT +
Sbjct: 509 PTFEYL 514
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 111/271 (40%), Gaps = 32/271 (11%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I +G S +Y A D +T + E + ++N Q KE I N++ + ++PN+
Sbjct: 29 IGQGASGTVYTAM---DVATGQ--EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
L + D+ ++ E L GSL ++ +D + Q L FLH
Sbjct: 84 LDSYLV--GDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN- 136
Query: 302 PFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXXXETLERGLL 359
Q ++ + NI + D S KL+ +G CA PE + E + R
Sbjct: 137 --QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 194
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419
PK ++WS GI+ +E++ G + +P L+ + P+L+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-------------PELQN-- 239
Query: 420 PLKAARTVADIALRCLQKEPSERPTMRSIFE 450
P K + D RCL+ + +R + + + +
Sbjct: 240 PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 38 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLD 94
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G + G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 95 FLKGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 150
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 151 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 210
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +KEP
Sbjct: 211 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 250
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 251 ERPTFEYL 258
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 211 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLD 267
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G + G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 268 FLKGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 323
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 324 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 383
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +KEP
Sbjct: 384 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 423
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 424 ERPTFEYL 431
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 211 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLD 267
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G + G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 268 FLKGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 323
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 324 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 383
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +KEP
Sbjct: 384 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 423
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 424 ERPTFEYL 431
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 35 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIXIVTEYMSKGSLLD 91
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G + G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 92 FLKGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 147
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 148 FGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 207
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +KEP
Sbjct: 208 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 247
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 248 ERPTFEYL 255
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 211 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVGEYMSKGSLLD 267
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G + G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 268 FLKGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 323
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 324 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 383
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +KEP
Sbjct: 384 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 423
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 424 ERPTFEYL 431
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 114
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 115 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 172 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 220
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 221 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEI 275
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 276 ISSIKEEME 284
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 123
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 229
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 230 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 284
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 285 ISSIKEEME 293
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 116
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 174 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 222
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 223 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 277
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 278 ISSIKEEME 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 123
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 229
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448
L + L+++ L +M+ L + P + ++ C Q P RP+ I
Sbjct: 230 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 284
Query: 449 FEELDRQ 455
+ +
Sbjct: 285 ISSIKEE 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 120
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 226
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 227 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 281
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 282 ISSIKEEME 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 129
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 235
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 236 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 290
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 291 ISSIKEEME 299
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 116
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 174 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 222
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 223 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEI 277
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 278 ISSIKEEME 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 122
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 228
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 229 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 283
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 284 ISSIKEEME 292
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y ++ ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 105 D--YLQAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 159
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 151
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 152 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 209 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 257
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 258 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 312
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 313 ISSIKEEME 321
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P ++ N
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPEMENN 122
Query: 282 ---------TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
+++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 228
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 229 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 283
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 284 ISSIKEEME 292
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 42 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMNKGSLLD 98
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G + G + V ++ A G+ ++ ++ + ANI + ++ K++
Sbjct: 99 FLKGET-GKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 154
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 155 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 214
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +KEP
Sbjct: 215 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 254
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 255 ERPTFEYL 262
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 32/248 (12%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL- 265
+ + L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 35 KVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL---YAVVSEEPIYIVTEYMNKGSLL 91
Query: 266 DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 325
D L G +G + V +A A G+ ++ ++ + +ANI + K+
Sbjct: 92 DFLKDG--EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKI 146
Query: 326 SGYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKN 381
+ +G A I + + E G T KS+VWSFGI+L EL+T GR
Sbjct: 147 ADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
Query: 382 LDSRHPKEERNLV-KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPS 440
+ +E V + R DC +SL ++ + C +K+P
Sbjct: 207 YPGMNNREVLEQVERGYRMPCPQDCPISL------------------HELMIHCWKKDPE 248
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 249 ERPTFEYL 256
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 36/247 (14%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP----- 276
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPAMANN 129
Query: 277 ----PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
P + +++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 235
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448
L + L+++ L +M+ L + P + ++ C Q P RP+ I
Sbjct: 236 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 290
Query: 449 FEELDRQ 455
+ +
Sbjct: 291 ISSIKEE 297
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 45 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + + ANI + ++ K++
Sbjct: 102 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVAD 157
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 158 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 217
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 218 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 258 ERPTFEYL 265
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 42 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMNKGSLLD 98
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G + G + V ++ A G+ ++ ++ + ANI + ++ K++
Sbjct: 99 FLKGET-GKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 154
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 155 FGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 214
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +KEP
Sbjct: 215 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 254
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 255 ERPTFEYL 262
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 115/310 (37%), Gaps = 56/310 (18%)
Query: 176 NFFSDRCI--------------SEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK 221
+FSD C+ EG ++ A + K V L +S+ +
Sbjct: 28 QYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR 87
Query: 222 E-FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP---- 276
+ F + L LQH ++ + G ++++E + HG L+R + RS GP
Sbjct: 88 QDFQREAELLTMLQHQHIVRFFGVCTE--GRPLLMVFEYMRHGDLNRFL--RSHGPDAKL 143
Query: 277 ----------PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
P+ + +A A G+ +L ++ + +T N + + K+
Sbjct: 144 LAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIG 200
Query: 327 GYGCAGHIPETDIXXXXXXXXXXXX----ETLERGLLTPKSNVWSFGIVLLELLTGRKNL 382
+G + I TD E++ T +S+VWSFG+VL E+ T K
Sbjct: 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
Query: 383 DSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER 442
+ E A DC + +L+ P V I C Q+EP +R
Sbjct: 261 WYQLSNTE-----------AIDC---ITQGRELE--RPRACPPEVYAIMRGCWQREPQQR 304
Query: 443 PTMRSIFEEL 452
+++ + L
Sbjct: 305 HSIKDVHARL 314
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 40/249 (16%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP----- 276
EF+N+ + + ++ +LLG ++ ++I E + G L Y RS P
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKS--YLRSLRPAMANN 119
Query: 277 ----PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
P + +++A A G+ +L+ + ++ + + N + +DF+ K+ +G
Sbjct: 120 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
Query: 333 HIPETDIXXXXXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
I ETD E+L+ G+ T S+VWSFG+VL E+ T
Sbjct: 177 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 225
Query: 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---- 444
L + L+++ L +M+ L + P + ++ C Q P RP+
Sbjct: 226 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 280
Query: 445 MRSIFEELD 453
+ SI EE++
Sbjct: 281 ISSIKEEME 289
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 101 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 155
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 156 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 105 E--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 159
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 106 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 160
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 161 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 45 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYMSKGSLLD 101
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 102 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 157
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 158 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 217
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 218 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 258 ERPTFEYL 265
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 100 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 154
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 155 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 107 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 161
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 162 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 108 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 162
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 163 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 105 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 159
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 35/266 (13%)
Query: 193 RASFGD-----DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR 247
+ SFG+ D T + + L + +++ ++ L+ P + + G + +
Sbjct: 29 KGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLK 88
Query: 248 DGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAM 306
S + +I E L GS LD L G P++ I +GL +LH E + +
Sbjct: 89 --STKLWIIMEYLGGGSALDLLKPG-----PLEETYIATILREILKGLDYLHSE---RKI 138
Query: 307 YNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX--XXXXETLERGLLTPKSN 364
+ + AN+ + + KL+ +G AG + +T I E +++ K++
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKAD 198
Query: 365 VWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAA 424
+WS GI +EL G HP L+ + P P L+G+ +
Sbjct: 199 IWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTLEGQ----HS 241
Query: 425 RTVADIALRCLQKEPSERPTMRSIFE 450
+ + CL K+P RPT + + +
Sbjct: 242 KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 133 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 187
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 188 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 45 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYMSKGSLLD 101
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 102 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 157
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 158 FGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 217
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 218 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 258 ERPTFEYL 265
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 34 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLD 90
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 91 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 146
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 147 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 206
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 207 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 246
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 247 ERPTFEYL 254
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 102 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 156
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 157 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 109 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 163
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 164 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 102 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 156
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 157 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 36 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLD 92
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 93 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 148
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 149 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 208
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 209 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 248
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 249 ERPTFEYL 256
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 45 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVCEYMSKGSLLD 101
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 102 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 157
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 158 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 217
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 218 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 258 ERPTFEYL 265
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 45 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 102 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 157
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 158 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 217
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 218 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 258 ERPTFEYL 265
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNL 238
+ + G +Y+ + + T K + LN ++ + EF+++ +AS+ HP+L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVK-IPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTF 296
+LLG S L+ + + HG L ++ D G + N V+I A+G+ +
Sbjct: 103 VRLLGVCL---SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI----AKGMMY 155
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA----GHIPETDIXXXXXXXXXXXXE 352
L E + ++ + + N+ + K++ +G A G E + E
Sbjct: 156 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 212
Query: 353 TLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395
+ T +S+VWS+G+ + EL+T G K D +E +L++
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 256
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 120 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 174
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 120 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 174
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 175 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ + +T NI ++ + K+
Sbjct: 102 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIG 156
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 208 ATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
V +L S++ +++F ++ L SLQH N+ K G G LI E L +GSL
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326
Y + ID ++ +G+ +L G + ++ +T NI ++ + K+
Sbjct: 103 D--YLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIG 157
Query: 327 GYGCAGHIPETDIXXXXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
+G +P+ E+L + S+VWSFG+VL EL T
Sbjct: 158 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 98/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFL--RKHDAQFTV 146
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G A++ + + NI I+ + K+S +G + + E D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 202
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 248
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 249 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 454 R 454
+
Sbjct: 306 K 306
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 32/261 (12%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR----MLIYERLFHGSLDRLIYG 271
+S ++EF+ + + HP++ KL+G R + R M+I + HG L +
Sbjct: 65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA 124
Query: 272 RSDGP-PIDW--NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328
G P + T V+ + A G+ +L ++ + + N + +D + ++ +
Sbjct: 125 SRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADF 181
Query: 329 GCAGHIPETDIXXXXXXXXX----XXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
G + I D E+L L T S+VW+FG+ + E++T G+
Sbjct: 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA 241
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP 443
E N +L RL + P + V D+ +C +P +RP
Sbjct: 242 GIENAEIYN-------YLIGGNRL----------KQPPECMEEVYDLMYQCWSADPKQRP 284
Query: 444 TMRSIFEELDRQESRKSSSST 464
+ + EL+ S ST
Sbjct: 285 SFTCLRMELENILGHLSVLST 305
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 47/282 (16%)
Query: 205 KFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY---E 258
+ +A + R+ S ++F ++ L L HPN+ LLG + R +Y E
Sbjct: 42 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG-----ACEHRGYLYLAIE 96
Query: 259 RLFHGSLDRLI-------------YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQA 305
HG+L + S + + A A+G+ +L ++ Q
Sbjct: 97 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QF 153
Query: 306 MYNEFSTANIQIDKDFSAKLSGYGCA-GHIPETDIXXXXXXXXXXXXETLERGLLTPKSN 364
++ + + NI + +++ AK++ +G + G E+L + T S+
Sbjct: 154 IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 213
Query: 365 VWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ-LKGRFPLKA 423
VWS+G++L E+++ P+ C PQ + PL
Sbjct: 214 VWSYGVLLWEIVSLG-----------------GTPYCGMTCAELYEKLPQGYRLEKPLNC 256
Query: 424 ARTVADIALRCLQKEPSERPTMRSIFEELDRQ-ESRKSSSST 464
V D+ +C +++P ERP+ I L+R E RK+ +T
Sbjct: 257 DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNT 298
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 47/282 (16%)
Query: 205 KFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY---E 258
+ +A + R+ S ++F ++ L L HPN+ LLG + R +Y E
Sbjct: 52 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG-----ACEHRGYLYLAIE 106
Query: 259 RLFHGSLDRLI-------------YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQA 305
HG+L + S + + A A+G+ +L ++ Q
Sbjct: 107 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QF 163
Query: 306 MYNEFSTANIQIDKDFSAKLSGYGCA-GHIPETDIXXXXXXXXXXXXETLERGLLTPKSN 364
++ + + NI + +++ AK++ +G + G E+L + T S+
Sbjct: 164 IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 223
Query: 365 VWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ-LKGRFPLKA 423
VWS+G++L E+++ P+ C PQ + PL
Sbjct: 224 VWSYGVLLWEIVSLG-----------------GTPYCGMTCAELYEKLPQGYRLEKPLNC 266
Query: 424 ARTVADIALRCLQKEPSERPTMRSIFEELDRQ-ESRKSSSST 464
V D+ +C +++P ERP+ I L+R E RK+ +T
Sbjct: 267 DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNT 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 146
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G G + E D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGL-GRVLEDDPE 202
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 248
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 249 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 454 R 454
+
Sbjct: 306 K 306
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNL 238
+ + G +Y+ + + T K + LN ++ + EF+++ +AS+ HP+L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVK-IPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTF 296
+LLG S L+ + + HG L ++ D G + N V+I A+G+ +
Sbjct: 80 VRLLGVCL---SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI----AKGMMY 132
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA----GHIPETDIXXXXXXXXXXXXE 352
L E + ++ + + N+ + K++ +G A G E + E
Sbjct: 133 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 353 TLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395
+ T +S+VWS+G+ + EL+T G K D +E +L++
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 233
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 99/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + ++H L +L +A + ++ E + GSL
Sbjct: 45 VAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 102 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 157
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 158 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 217
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 218 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 258 ERPTFEYL 265
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 40/279 (14%)
Query: 193 RASFGDDASTSKKFEATVTRLNPSSQGV-----KEFINDVNTLASLQHPNLCKLLGFHAR 247
R +FG+ S + + T+ + + + +F+ + L HPN+ +L+G +
Sbjct: 124 RGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 183
Query: 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMY 307
Q + I L G D L + R++G + T +++ AA G+ +L + ++
Sbjct: 184 K---QPIYIVMELVQGG-DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 308 NEFSTANIQIDKDFSAKLSGYGC----AGHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ + N + + K+S +G A + E L G + +S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 364 NVWSFGIVLLELL----TGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419
+VWSFGI+L E + NL ++ +E F+ RL P+L
Sbjct: 297 DVWSFGILLWETFSLGASPYPNLSNQQTRE----------FVEKGGRLPC---PEL---- 339
Query: 420 PLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458
V + +C EP +RP+ +I++EL R
Sbjct: 340 ---CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 98/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + G L
Sbjct: 45 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVMEYMSKGCLLD 101
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 102 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 157
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 158 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 217
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 218 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 258 ERPTFEYL 265
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 111/282 (39%), Gaps = 47/282 (16%)
Query: 205 KFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY---E 258
+ +A + R+ S ++F ++ L L HPN+ LLG + R +Y E
Sbjct: 49 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG-----ACEHRGYLYLAIE 103
Query: 259 RLFHGSLDRLI-------------YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQA 305
HG+L + S + + A A+G+ +L ++ Q
Sbjct: 104 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QF 160
Query: 306 MYNEFSTANIQIDKDFSAKLSGYGCA-GHIPETDIXXXXXXXXXXXXETLERGLLTPKSN 364
++ + NI + +++ AK++ +G + G E+L + T S+
Sbjct: 161 IHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 220
Query: 365 VWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ-LKGRFPLKA 423
VWS+G++L E+++ P+ C PQ + PL
Sbjct: 221 VWSYGVLLWEIVSLG-----------------GTPYCGMTCAELYEKLPQGYRLEKPLNC 263
Query: 424 ARTVADIALRCLQKEPSERPTMRSIFEELDRQ-ESRKSSSST 464
V D+ +C +++P ERP+ I L+R E RK+ +T
Sbjct: 264 DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNT 305
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLI--YGRSDGPPIDWNTR 283
+ L L N ++GF+ SD + I E + GSLD+++ GR I
Sbjct: 55 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQIL 109
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXX 343
K+++ +GLT+L E+ + M+ + +NI ++ KL +G +G + +
Sbjct: 110 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV 167
Query: 344 XXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403
E L+ + +S++WS G+ L+E+ GR + RP +A
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR----------------YPRPPMAI 211
Query: 404 DCRLSLIMD---PQL-KGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449
L I++ P+L F L+ D +CL K P+ER ++ +
Sbjct: 212 FELLDYIVNEPPPKLPSAVFSLE----FQDFVNKCLIKNPAERADLKQLM 257
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 146
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G A + E D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLA-RVLEDDPE 202
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 248
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 249 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 454 R 454
+
Sbjct: 306 K 306
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 98/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + GSL
Sbjct: 212 VAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLD 268
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 269 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 324
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 325 FGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 384
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 385 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 424
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 425 ERPTFEYL 432
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 98/248 (39%), Gaps = 34/248 (13%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR 267
+ L P + + F+ + + L+H L +L +A + ++ E + G L
Sbjct: 45 VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGCLLD 101
Query: 268 LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
+ G G + V +A A G+ ++ ++ + ANI + ++ K++
Sbjct: 102 FLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVAD 157
Query: 328 YGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLD 383
+G A I + + E G T KS+VWSFGI+L EL T GR
Sbjct: 158 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 217
Query: 384 SRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG-RFPL--KAARTVADIALRCLQKEPS 440
+E ++D +G R P + ++ D+ +C +K+P
Sbjct: 218 GMVNRE--------------------VLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 441 ERPTMRSI 448
ERPT +
Sbjct: 258 ERPTFEYL 265
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 110/289 (38%), Gaps = 42/289 (14%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLCKL 241
+ EG ++ A + K V L +S+ ++ F + L LQH ++ +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP--------------PIDWNTRVKIA 287
G ++++E + HG L+R + RS GP P+ + +A
Sbjct: 80 FGVCTE--GRPLLMVFEYMRHGDLNRFL--RSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 288 LCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX 347
A G+ +L ++ + +T N + + K+ +G + I TD
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 348 XXXX----ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403
E++ T +S+VWSFG+VL E+ T K + E A
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-----------AI 241
Query: 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
DC + +L+ P V I C Q+EP +R +++ + L
Sbjct: 242 DC---ITQGRELER--PRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 40/279 (14%)
Query: 193 RASFGDDASTSKKFEATVTRLNPSSQGV-----KEFINDVNTLASLQHPNLCKLLGFHAR 247
R +FG+ S + + T+ + + + +F+ + L HPN+ +L+G +
Sbjct: 124 RGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 183
Query: 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMY 307
Q + I L G D L + R++G + T +++ AA G+ +L + ++
Sbjct: 184 K---QPIYIVMELVQGG-DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 308 NEFSTANIQIDKDFSAKLSGYGC----AGHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ + N + + K+S +G A + E L G + +S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 364 NVWSFGIVLLELL----TGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419
+VWSFGI+L E + NL ++ +E F+ RL P+L
Sbjct: 297 DVWSFGILLWETFSLGASPYPNLSNQQTRE----------FVEKGGRLPC---PEL---- 339
Query: 420 PLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458
V + +C EP +RP+ +I++EL R
Sbjct: 340 ---CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 39/244 (15%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGF-HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPID 279
+EF +V +++L HPN+ KL G H + L+H LD+ PI
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDK-------AHPIK 120
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI---QIDKD--FSAKLSGYGCAGHI 334
W+ ++++ L A G+ ++ + P ++ + + NI +D++ AK++ +G +
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS 179
Query: 335 PETDIXXXXXXXXXXXXETL--ERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER- 391
+ + ET+ E T K++ +SF ++L +LTG D + +
Sbjct: 180 VHS-VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 392 -NLVKWS--RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448
N+++ RP + +DC P+L R V ++ C +P +RP I
Sbjct: 239 INMIREEGLRPTIPEDC------PPRL---------RNVIEL---CWSGDPKKRPHFSYI 280
Query: 449 FEEL 452
+EL
Sbjct: 281 VKEL 284
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 39/244 (15%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGF-HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPID 279
+EF +V +++L HPN+ KL G H + L+H LD+ PI
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDK-------AHPIK 120
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI---QIDKD--FSAKLSGYGCAGHI 334
W+ ++++ L A G+ ++ + P ++ + + NI +D++ AK++ +G +
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179
Query: 335 PETDIXXXXXXXXXXXXETL--ERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER- 391
+ + ET+ E T K++ +SF ++L +LTG D + +
Sbjct: 180 VHS-VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 392 -NLVKWS--RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448
N+++ RP + +DC P+L R V ++ C +P +RP I
Sbjct: 239 INMIREEGLRPTIPEDC------PPRL---------RNVIEL---CWSGDPKKRPHFSYI 280
Query: 449 FEEL 452
+EL
Sbjct: 281 VKEL 284
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 26/218 (11%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLCKL 241
+ EG ++ A + K V L +S+ ++ F + L LQH ++ +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP--------------PIDWNTRVKIA 287
G ++++E + HG L+R + RS GP P+ + +A
Sbjct: 86 FGVCTE--GRPLLMVFEYMRHGDLNRFL--RSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 288 LCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXX 347
A G+ +L ++ + +T N + + K+ +G + I TD
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 348 XXXX----ETLERGLLTPKSNVWSFGIVLLELLTGRKN 381
E++ T +S+VWSFG+VL E+ T K
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLI--YGRSDGPPIDWNTR 283
+ L L N ++GF+ SD + I E + GSLD+++ GR I
Sbjct: 114 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQIL 168
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXX 343
K+++ +GLT+L E+ + M+ + +NI ++ KL +G +G + ++
Sbjct: 169 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 226
Query: 344 XXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
E L+ + +S++WS G+ L+E+ GR
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+ L L N ++GF+ SD + I E + GSLD+++ + I K
Sbjct: 62 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KEAKRIPEEILGK 118
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
+++ +GL +L E+ Q M+ + +NI ++ KL +G +G + ++
Sbjct: 119 VSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 176
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
E L+ + +S++WS G+ L+EL GR
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+ L L N ++GF+ SD + I E + GSLD+++ P K
Sbjct: 71 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGK 127
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
+++ +GLT+L E+ + M+ + +NI ++ KL +G +G + ++
Sbjct: 128 VSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 185
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E L+ + +S++WS G+ L+E+ GR + S +A
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS------------MAIFE 233
Query: 406 RLSLIMD---PQL-KGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449
L I++ P+L G F L+ D +CL K P+ER ++ +
Sbjct: 234 LLDYIVNEPPPKLPSGVFSLE----FQDFVNKCLIKNPAERADLKQLM 277
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 204 KKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK + + R+N + E + ++ ++ HPN+ + + D+ L+ + L
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY--YTSFVVKDELWLVMKLLS 96
Query: 262 HGSLDRLIY-----GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQ 316
GS+ +I G +D +T I +GL +LH+ G ++ + NI
Sbjct: 97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNIL 153
Query: 317 IDKDFSAKLSGYGCAGHIPET-DIXXXXXXXXXXXX------ETLE--RGLLTPKSNVWS 367
+ +D S +++ +G + + DI E +E RG K+++WS
Sbjct: 154 LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWS 212
Query: 368 FGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTV 427
FGI +EL TG P + L + P + + + D ++ ++ K+ R +
Sbjct: 213 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE----TGVQDKEMLKKYG-KSFRKM 267
Query: 428 ADIALRCLQKEPSERPT 444
+ CLQK+P +RPT
Sbjct: 268 ISL---CLQKDPEKRPT 281
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFL--RKHDAQFTV 146
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 202
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 248
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 249 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 454 R 454
+
Sbjct: 306 K 306
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 146
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 202
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 248
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 249 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 454 R 454
+
Sbjct: 306 K 306
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 146
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 202
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 248
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 249 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 454 R 454
+
Sbjct: 306 K 306
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 146
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 202
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 248
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 249 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 454 R 454
+
Sbjct: 306 K 306
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 144
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 145 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 200
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 201 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 246
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 247 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 303
Query: 454 R 454
+
Sbjct: 304 K 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 146
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 202
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 248
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 249 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 454 R 454
+
Sbjct: 306 K 306
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLI--YGRSDGPPIDWNTR 283
+ L L N ++GF+ SD + I E + GSLD+++ GR I
Sbjct: 79 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQIL 133
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXX 343
K+++ +GLT+L E+ + M+ + +NI ++ KL +G +G + ++
Sbjct: 134 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 191
Query: 344 XXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
E L+ + +S++WS G+ L+E+ GR
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 204 KKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK + + R+N + E + ++ ++ HPN+ + + D+ L+ + L
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY--YTSFVVKDELWLVMKLLS 91
Query: 262 HGSLDRLIY-----GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQ 316
GS+ +I G +D +T I +GL +LH+ G ++ + NI
Sbjct: 92 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNIL 148
Query: 317 IDKDFSAKLSGYGCAGHIPET-DIXXXXXXXXXXXX------ETLE--RGLLTPKSNVWS 367
+ +D S +++ +G + + DI E +E RG K+++WS
Sbjct: 149 LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWS 207
Query: 368 FGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTV 427
FGI +EL TG P + L + P + + + D ++ ++ K+ R +
Sbjct: 208 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE----TGVQDKEMLKKYG-KSFRKM 262
Query: 428 ADIALRCLQKEPSERPT 444
+ CLQK+P +RPT
Sbjct: 263 ISL---CLQKDPEKRPT 276
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 99/242 (40%), Gaps = 32/242 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+++ + + HPN+ L G + S M+I E + +GSLD + R +
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTK--STPVMIITEFMENGSLDSFL--RQNDGQFTV 134
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE---- 336
V + A G+ +L + ++ + + NI ++ + K+S +G + + +
Sbjct: 135 IQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 191
Query: 337 ---TDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERN 392
T E ++ T S+VWS+GIV+ E+++ G + ++ N
Sbjct: 192 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 251
Query: 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
++ D RL P+ + + L C QK+ + RP I L
Sbjct: 252 AIE-------QDYRLPP----------PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 294
Query: 453 DR 454
D+
Sbjct: 295 DK 296
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFL--RKHDAQFTV 117
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 118 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 173
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 219
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 220 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
Query: 454 R 454
+
Sbjct: 277 K 277
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 134
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 135 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 190
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 191 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 236
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 237 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 293
Query: 454 R 454
+
Sbjct: 294 K 294
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 117
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 118 IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 173
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 219
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 220 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
Query: 454 R 454
+
Sbjct: 277 K 277
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 21 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 78
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 79 -QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 132
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 193 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 241
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 242 KAMKRLMAE----CLKKKRDERPLFPQILASIE 270
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 47 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 104
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 105 -QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 158
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 267
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 268 KAMKRLMAE----CLKKKRDERPLFPQILASIE 296
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLI--YGRSDGPPIDWNTR 283
+ L L N ++GF+ SD + I E + GSLD+++ GR I
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQIL 106
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXX 343
K+++ +GLT+L E+ + M+ + +NI ++ KL +G +G + ++
Sbjct: 107 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 164
Query: 344 XXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
E L+ + +S++WS G+ L+E+ GR
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 47 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 104
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 105 -QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 158
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 267
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 268 KAMKRLMAE----CLKKKRDERPLFPQILASIE 296
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ +L G + S M++ E + +GSLD + R
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFL--RKHDAQFTV 146
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + A G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 202
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIVL E+++ +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-------------- 248
Query: 395 KWSRPFL-ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ + + +D + P+ + + L C QK+ + RP I LD
Sbjct: 249 ---RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 454 R 454
+
Sbjct: 306 K 306
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 24 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 81
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 82 -QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 135
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 244
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 245 KAMKRLMAE----CLKKKRDERPLFPQILASIE 273
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLI--YGRSDGPPIDWNTR 283
+ L L N ++GF+ SD + I E + GSLD+++ GR I
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQIL 106
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXX 343
K+++ +GLT+L E+ + M+ + +NI ++ KL +G +G + ++
Sbjct: 107 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 164
Query: 344 XXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
E L+ + +S++WS G+ L+E+ GR
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 46 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 103
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 104 -QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 157
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 218 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 266
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 267 KAMKRLMAE----CLKKKRDERPLFPQILASIE 295
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 39 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 96
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 97 -QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 150
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 211 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 259
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 260 KAMKRLMAE----CLKKKRDERPLFPQILASIE 288
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 19 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 76
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 77 -QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 130
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 239
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 240 KAMKRLMAE----CLKKKRDERPLFPQILASIE 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 24 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 81
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 82 -QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 135
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 244
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 245 KAMKRLMAE----CLKKKRDERPLFPQILASIE 273
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 19 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 76
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 77 -QLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 130
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 239
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 240 KAMKRLMAE----CLKKKRDERPLFPQILASIE 268
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLI--YGRSDGPPIDWNTR 283
+ L L N ++GF+ SD + I E + GSLD+++ GR I
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQIL 106
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXX 343
K+++ +GLT+L E+ + M+ + +NI ++ KL +G +G + ++
Sbjct: 107 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 164
Query: 344 XXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
E L+ + +S++WS G+ L+E+ GR
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 227 VNTLASLQHPNLCKLLGFHARDGSDQRMLI-YERLFHGSLDRLI--YGRSDGPPIDWNTR 283
+ L L N ++GF+ SD + I E + GSLD+++ GR I
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQIL 106
Query: 284 VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXX 343
K+++ +GLT+L E+ + M+ + +NI ++ KL +G +G + ++
Sbjct: 107 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 164
Query: 344 XXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
E L+ + +S++WS G+ L+E+ GR
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 34/242 (14%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+++ + + HPN+ L G + M+I E + +GSLD + R +
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTK--CKPVMIITEYMENGSLDAFL--RKNDGRFTV 130
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + G+ +L + A++ + + NI ++ + K+S +G + + E D
Sbjct: 131 IQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMS-RVLEDDPE 186
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIV+ E+++ +
Sbjct: 187 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE-------------- 232
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
RP+ D +I + R P+ + + L C QKE S+RP I L
Sbjct: 233 ---RPYW-DMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
Query: 453 DR 454
D+
Sbjct: 289 DK 290
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ L G R M++ E + +G+LD + R
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTR--GKPVMIVIEFMENGALDAFL--RKHDGQFTV 144
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI---PET 337
V + A G+ +L + G ++ + + NI ++ + K+S +G + I PE
Sbjct: 145 IQLVGMLRGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA 201
Query: 338 DIXXXXXX--XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK 395
E ++ T S+VWS+GIV+ E+++ +
Sbjct: 202 VYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE--------------- 246
Query: 396 WSRPFLADDCRLSLIMDPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
RP+ D +I + R P+ + + L C QKE +ERP I LD
Sbjct: 247 --RPYW-DMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILD 303
Query: 454 R 454
+
Sbjct: 304 K 304
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 19 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---A 75
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA AQG+ +LH + ++ +
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 130
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + ++ + +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R +L+ D +++ P
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRGYLSPDL-------SKVRSNCP 239
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
R +A+ CL+K+ ERP I ++
Sbjct: 240 KAMKRLMAE----CLKKKRDERPLFPQILASIE 268
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 39/244 (15%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGF-HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPID 279
+EF +V +++L HPN+ KL G H + L+H LD+ PI
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDK-------AHPIK 120
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI---QIDKD--FSAKLSGYGCAGHI 334
W+ ++++ L A G+ ++ + P ++ + + NI +D++ AK++ + +
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS 179
Query: 335 PETDIXXXXXXXXXXXXETL--ERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER- 391
+ + ET+ E T K++ +SF ++L +LTG D + +
Sbjct: 180 VHS-VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 392 -NLVKWS--RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448
N+++ RP + +DC P+L R V ++ C +P +RP I
Sbjct: 239 INMIREEGLRPTIPEDC------PPRL---------RNVIEL---CWSGDPKKRPHFSYI 280
Query: 449 FEEL 452
+EL
Sbjct: 281 VKEL 284
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 38/251 (15%)
Query: 204 KKFEATVTRLNPSSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRMLIYERLFH 262
K+ ATV +SQ K + D++ ++ ++ P G R+G + I L
Sbjct: 82 KRIRATV-----NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD---VWICMELMD 133
Query: 263 GSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321
SLD+ D G I + KIA+ + L LH + ++ + +N+ I+
Sbjct: 134 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALG 191
Query: 322 SAKLSGYGCAGHIPET-----DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELL 376
K+ +G +G++ ++ D L + + KS++WS GI ++EL
Sbjct: 192 QVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
Query: 377 TGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD---PQLKGRFPLKAARTVADIALR 433
R DS W PF +L +++ PQL K + D +
Sbjct: 252 ILRFPYDS-----------WGTPFQ----QLKQVVEEPSPQLPAD---KFSAEFVDFTSQ 293
Query: 434 CLQKEPSERPT 444
CL+K ERPT
Sbjct: 294 CLKKNSKERPT 304
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 32/242 (13%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+++ + + HPN+ L G + S M+I E + +GSLD + R +
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTK--STPVMIITEFMENGSLDSFL--RQNDGQFTV 108
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE---- 336
V + A G+ +L + ++ + NI ++ + K+S +G + + +
Sbjct: 109 IQLVGMLRGIAAGMKYLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSD 165
Query: 337 ---TDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERN 392
T E ++ T S+VWS+GIV+ E+++ G + ++ N
Sbjct: 166 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 225
Query: 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
++ D RL P P+ + + L C QK+ + RP I L
Sbjct: 226 AIE-------QDYRLP----P------PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
Query: 453 DR 454
D+
Sbjct: 269 DK 270
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 35 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK--- 91
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA A+G+ +LH + ++ +
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDL 146
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + + + +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R L+ D +++ P
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNINNR----DQIIEMVGRGSLSPDL-------SKVRSNCP 255
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
+ R +A+ CL+K+ ERP+ I E++
Sbjct: 256 KRMKRLMAE----CLKKKRDERPSFPRILAEIE 284
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 111/277 (40%), Gaps = 43/277 (15%)
Query: 198 DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLI 256
D + K + + + + + + + I+++ + + +H N+ LLG +DG +I
Sbjct: 44 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LYVI 101
Query: 257 YERLFHGSLDRLI-----------YGRSDGPPIDWNTR--VKIALCAAQGLTFLHEEGPF 303
E G+L + Y S P +++ V A A+G+ +L +
Sbjct: 102 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--- 158
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLL 359
+ ++ + + N+ + +D K++ +G A I D E L +
Sbjct: 159 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 218
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLKG 417
T +S+VWSFG++L E+ T + P EE + L + R +C L M
Sbjct: 219 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------ 272
Query: 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
+ C PS+RPT + + E+LDR
Sbjct: 273 ------------MMRDCWHAVPSQRPTFKQLVEDLDR 297
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 111/277 (40%), Gaps = 43/277 (15%)
Query: 198 DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLI 256
D + K + + + + + + + I+++ + + +H N+ LLG +DG +I
Sbjct: 47 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LYVI 104
Query: 257 YERLFHGSLDRLI-----------YGRSDGPPIDWNTR--VKIALCAAQGLTFLHEEGPF 303
E G+L + Y S P +++ V A A+G+ +L +
Sbjct: 105 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--- 161
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLL 359
+ ++ + + N+ + +D K++ +G A I D E L +
Sbjct: 162 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 221
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLKG 417
T +S+VWSFG++L E+ T + P EE + L + R +C L M
Sbjct: 222 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------ 275
Query: 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
+ C PS+RPT + + E+LDR
Sbjct: 276 ------------MMRDCWHAVPSQRPTFKQLVEDLDR 300
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 34/268 (12%)
Query: 193 RASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252
+ FGD + + + + F+ + + + L+H NL +LLG +
Sbjct: 203 KGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG- 261
Query: 253 RMLIYERLFHGSLDRLIYGRSDGPPI-DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFS 311
++ E + GSL + Y RS G + + +K +L + + +L EG ++ + +
Sbjct: 262 LYIVTEYMAKGSL--VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGN-NFVHRDLA 316
Query: 312 TANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIV 371
N+ + +D AK+S +G T E L + KS+VWSFGI+
Sbjct: 317 ARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 375
Query: 372 LLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAAR----T 426
L E+ + GR V + R L D + P+++ + + A
Sbjct: 376 LWEIYSFGR--------------VPYPRIPLKD-------VVPRVEKGYKMDAPDGCPPA 414
Query: 427 VADIALRCLQKEPSERPTMRSIFEELDR 454
V D+ C + + RPT + E+L+
Sbjct: 415 VYDVMKNCWHLDAATRPTFLQLREQLEH 442
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 111/277 (40%), Gaps = 43/277 (15%)
Query: 198 DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLI 256
D + K + + + + + + + I+++ + + +H N+ LLG +DG +I
Sbjct: 48 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LYVI 105
Query: 257 YERLFHGSLDRLI-----------YGRSDGPPIDWNTR--VKIALCAAQGLTFLHEEGPF 303
E G+L + Y S P +++ V A A+G+ +L +
Sbjct: 106 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--- 162
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLL 359
+ ++ + + N+ + +D K++ +G A I D E L +
Sbjct: 163 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 222
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLKG 417
T +S+VWSFG++L E+ T + P EE + L + R +C L M
Sbjct: 223 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------ 276
Query: 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
+ C PS+RPT + + E+LDR
Sbjct: 277 ------------MMRDCWHAVPSQRPTFKQLVEDLDR 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 111/277 (40%), Gaps = 43/277 (15%)
Query: 198 DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLI 256
D + K + + + + + + + I+++ + + +H N+ LLG +DG +I
Sbjct: 55 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LYVI 112
Query: 257 YERLFHGSLDRLI-----------YGRSDGPPIDWNTR--VKIALCAAQGLTFLHEEGPF 303
E G+L + Y S P +++ V A A+G+ +L +
Sbjct: 113 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--- 169
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLL 359
+ ++ + + N+ + +D K++ +G A I D E L +
Sbjct: 170 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 229
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLKG 417
T +S+VWSFG++L E+ T + P EE + L + R +C L M
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------ 283
Query: 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
+ C PS+RPT + + E+LDR
Sbjct: 284 ------------MMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 112/278 (40%), Gaps = 45/278 (16%)
Query: 198 DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLI 256
D + K + + + + + + + I+++ + + +H N+ LLG +DG +I
Sbjct: 55 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LYVI 112
Query: 257 YERLFHGSLDRLIYGRSDGPPIDWNTR--------------VKIALCAAQGLTFLHEEGP 302
E G+L + R + P ++++ V A A+G+ +L +
Sbjct: 113 VEYASKGNLREYLQAR-EPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-- 169
Query: 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGL 358
+ ++ + + N+ + +D K++ +G A I D E L +
Sbjct: 170 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 359 LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLK 416
T +S+VWSFG++L E+ T + P EE + L + R +C L M
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM----- 283
Query: 417 GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
+ C PS+RPT + + E+LDR
Sbjct: 284 -------------MMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 23 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-- 80
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA A+G+ +LH + ++ +
Sbjct: 81 -QLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 134
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + + + +S
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R L+ D +++ P
Sbjct: 195 DVYAFGIVLYELMTGQLPYSNINNR----DQIIEMVGRGSLSPDL-------SKVRSNCP 243
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
+ R +A+ CL+K+ ERP+ I E++
Sbjct: 244 KRMKRLMAE----CLKKKRDERPSFPRILAEIE 272
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 50/259 (19%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S++ ++F + L HPN+ +LG + LI + +GSL +++ ++
Sbjct: 47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF 106
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG-------- 327
+D + VK AL A+G+ FLH P + ++ ++ ID+D +A++S
Sbjct: 107 V-VDQSQAVKFALDMARGMAFLHTLEPLIPRH-ALNSRSVMIDEDMTARISMADVKFSFQ 164
Query: 328 -----YGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNL 382
Y A PE +T R +++WSF ++L EL+T
Sbjct: 165 SPGRMYAPAWVAPEA--------LQKKPEDTNRRS-----ADMWSFAVLLWELVTREV-- 209
Query: 383 DSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG---RFPLKAARTVADIALRCLQKEP 439
PF AD + + M L+G P + V+ + C+ ++P
Sbjct: 210 ----------------PF-ADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDP 252
Query: 440 SERPTMRSIFEELDRQESR 458
++RP I L++ + +
Sbjct: 253 AKRPKFDMIVPILEKMQDK 271
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 111/277 (40%), Gaps = 43/277 (15%)
Query: 198 DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLI 256
D + K + + + + + + + I+++ + + +H N+ LLG +DG +I
Sbjct: 40 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LYVI 97
Query: 257 YERLFHGSLDRLI-----------YGRSDGPPIDWNTR--VKIALCAAQGLTFLHEEGPF 303
E G+L + Y S P +++ V A A+G+ +L +
Sbjct: 98 VEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--- 154
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLL 359
+ ++ + + N+ + +D K++ +G A I D E L +
Sbjct: 155 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 214
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLKG 417
T +S+VWSFG++L E+ T + P EE + L + R +C L M
Sbjct: 215 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------ 268
Query: 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
+ C PS+RPT + + E+LDR
Sbjct: 269 ------------MMRDCWHAVPSQRPTFKQLVEDLDR 293
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 36/273 (13%)
Query: 194 ASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250
SFG + V LN P+ Q ++ F N+V L +H N+ +G+ +
Sbjct: 35 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---A 91
Query: 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310
Q ++ + SL ++ + + IA A+G+ +LH + ++ +
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDL 146
Query: 311 STANIQIDKDFSAKLSGYGCA-------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ NI + +D + K+ +G A G + + + +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 364 NVWSFGIVLLELLTGR---KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420
+V++FGIVL EL+TG+ N+++R ++ + R L+ D +++ P
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNINNR----DQIIEMVGRGSLSPDL-------SKVRSNCP 255
Query: 421 LKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
+ R +A+ CL+K+ ERP+ I E++
Sbjct: 256 KRMKRLMAE----CLKKKRDERPSFPRILAEIE 284
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 112/275 (40%), Gaps = 39/275 (14%)
Query: 198 DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLI 256
D + K + + + + + + + I+++ + + +H N+ LLG +DG +I
Sbjct: 96 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LYVI 153
Query: 257 YERLFHGSLDRLI-----------YGRSDGPPIDWNTR--VKIALCAAQGLTFLHEEGPF 303
E G+L + Y S P +++ V A A+G+ +L +
Sbjct: 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--- 210
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLL 359
+ ++ + + N+ + +D K++ +G A I D E L +
Sbjct: 211 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 270
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419
T +S+VWSFG++L E+ T + P EE L K L + R MD
Sbjct: 271 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--LFK----LLKEGHR----MDK------ 314
Query: 420 PLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
P + + C PS+RPT + + E+LDR
Sbjct: 315 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 84 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 138
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 139 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 195
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 237
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 238 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 111/277 (40%), Gaps = 43/277 (15%)
Query: 198 DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLI 256
D + K + + + + + + + I+++ + + +H N+ LLG +DG +I
Sbjct: 55 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LYVI 112
Query: 257 YERLFHGSLDRLI-----------YGRSDGPPIDWNTR--VKIALCAAQGLTFLHEEGPF 303
E G+L + Y S P +++ V A A+G+ +L +
Sbjct: 113 VEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--- 169
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLL 359
+ ++ + + N+ + +D K++ +G A I D E L +
Sbjct: 170 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 229
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLKG 417
T +S+VWSFG++L E+ T + P EE + L + R +C L M
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------ 283
Query: 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
+ C PS+RPT + + E+LDR
Sbjct: 284 ------------MMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Query: 193 RASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252
+ FGD + + + + F+ + + + L+H NL +LLG +
Sbjct: 22 KGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGG 80
Query: 253 RMLIYERLFHGSLDRLIYGRSDGPPI-DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFS 311
++ E + GSL + Y RS G + + +K +L + + +L E F ++ + +
Sbjct: 81 LYIVTEYMAKGSL--VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNNF--VHRDLA 135
Query: 312 TANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIV 371
N+ + +D AK+S +G T E L + KS+VWSFGI+
Sbjct: 136 ARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWTAPEALREAAFSTKSDVWSFGIL 194
Query: 372 LLELLT 377
L E+ +
Sbjct: 195 LWEIYS 200
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 112/277 (40%), Gaps = 43/277 (15%)
Query: 198 DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLI 256
D + K + + + + + + + I+++ + + +H N+ LLG +DG +I
Sbjct: 55 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LYVI 112
Query: 257 YERLFHGSLDRLIYGR-----------SDGPPIDWNTR--VKIALCAAQGLTFLHEEGPF 303
E G+L + R S P +++ V A A+G+ +L +
Sbjct: 113 VEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--- 169
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX----XXXXXXETLERGLL 359
+ ++ + + N+ + +D K++ +G A I D E L +
Sbjct: 170 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIY 229
Query: 360 TPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDPQLKG 417
T +S+VWSFG++L E+ T + P EE + L + R +C L M
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM------ 283
Query: 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
+ C PS+RPT + + E+LDR
Sbjct: 284 ------------MMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 95/241 (39%), Gaps = 34/241 (14%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+++ + + HPN+ +L G R M++ E + +GSLD + R+
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDTFL--RTHDGQFTI 150
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + G+ +L + G ++ + + N+ +D + K+S +G + + E D
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLS-RVLEDDPD 206
Query: 341 XXXXXXXX------XXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + + S+VWSFG+V+ E+L +
Sbjct: 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE-------------- 252
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
RP+ R +I + R P+ + + L C K+ ++RP I L
Sbjct: 253 ---RPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
Query: 453 D 453
D
Sbjct: 309 D 309
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 96/241 (39%), Gaps = 34/241 (14%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+++ + + HPN+ +L G R M++ E + +GSLD + R+
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDTFL--RTHDGQFTI 150
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + G+ +L + G ++ + + N+ +D + K+S +G + + E D
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLS-RVLEDDPD 206
Query: 341 XXXXXXXX------XXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + + S+VWSFG+V+ E+L +
Sbjct: 207 AAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE-------------- 252
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
RP+ R +I + R P+ + + L C K+ ++RP I L
Sbjct: 253 ---RPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
Query: 453 D 453
D
Sbjct: 309 D 309
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 105/273 (38%), Gaps = 54/273 (19%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-------- 273
+F + +A +PN+ KLLG A L++E + +G L+ + S
Sbjct: 96 DFQREAALMAEFDNPNIVKLLGVCAV--GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLS 153
Query: 274 -------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
PP+ ++ IA A G+ +L E + ++ + +T N + ++
Sbjct: 154 HSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGEN 210
Query: 321 FSAKLSGYGCAGHIPETDIXXXXXXXXXXXX----ETLERGLLTPKSNVWSFGIVLLELL 376
K++ +G + +I D E++ T +S+VW++G+VL E+
Sbjct: 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
Query: 377 TGRKNLDSRHPKEERNLVKWSRP--FLA--DDCRLSLIMDPQLKGRFPLKAARTVADIAL 432
+ L + ++ + R LA ++C L L ++
Sbjct: 271 S--YGLQPYYGMAHEEVIYYVRDGNILACPENCPLELY------------------NLMR 310
Query: 433 RCLQKEPSERPTMRSIFEELDRQESRKSSSSTV 465
C K P++RP+ SI L R R + V
Sbjct: 311 LCWSKLPADRPSFCSIHRILQRMCERAEGTVGV 343
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 84 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 138
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 139 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGT 195
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 237
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 238 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 59 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 113
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGT 170
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 212
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 213 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 60 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 114
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 115 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGT 171
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 213
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 214 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 75 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 129
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 130 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 186
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 228
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 229 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ S + LI E G++ R + S D
Sbjct: 58 EVEIQSHLRHPNILRLYGYF--HDSTRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 112
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 113 YITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 169
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 211
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 212 QDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY 270
T+LNP+S +++ +V + L HPN+ KL F + LI E G + +
Sbjct: 51 TQLNPTS--LQKLFREVRIMKILNHPNIVKL--FEVIETEKTLYLIMEYASGGEVFDYLV 106
Query: 271 GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330
+ ++ + + A Q + H++ + ++ + N+ +D D + K++ +G
Sbjct: 107 AHGRMKEKEARSKFRQIVSAVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGF 160
Query: 331 AGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
+ L +G P+ +VWS G++L L++G D ++ K
Sbjct: 161 SNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
Query: 389 EERNLV---KWSRPF-LADDC----RLSLIMDPQLKG 417
E R V K+ PF ++ DC + L+++P +G
Sbjct: 221 ELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRG 257
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 42/252 (16%)
Query: 210 VTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM-LIYERLFHGSLDRL 268
+ R + +Q + F+ +V + L+HPN+ K +G + D+R+ I E + G+L +
Sbjct: 43 LIRFDEETQ--RTFLKEVKVMRCLEHPNVLKFIGVLYK---DKRLNFITEYIKGGTLRGI 97
Query: 269 IYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328
I P W+ RV A A G+ +LH ++ + ++ N + ++ + ++ +
Sbjct: 98 IKSMDSQYP--WSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADF 152
Query: 329 GCAGHIPETDI----------------XXXXXXXXXXXXETLERGLLTPKSNVWSFGIVL 372
G A + + E + K +V+SFGIVL
Sbjct: 153 GLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212
Query: 373 LELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIAL 432
E++ GR N D + + R FL C P + I +
Sbjct: 213 CEII-GRVNADPDYLPRTMDFGLNVRGFLDRYC--------------PPNCPPSFFPITV 257
Query: 433 RCLQKEPSERPT 444
RC +P +RP+
Sbjct: 258 RCCDLDPEKRPS 269
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY 270
T+LNP+S +++ +V + L HPN+ KL F + LI E G + +
Sbjct: 48 TQLNPTS--LQKLFREVRIMKILNHPNIVKL--FEVIETEKTLYLIMEYASGGEVFDYLV 103
Query: 271 GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330
+ ++ + + A Q + H++ + ++ + N+ +D D + K++ +G
Sbjct: 104 AHGRMKEKEARSKFRQIVSAVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGF 157
Query: 331 AGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
+ L +G P+ +VWS G++L L++G D ++ K
Sbjct: 158 SNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 217
Query: 389 EERNLV---KWSRPF-LADDC----RLSLIMDPQLKG 417
E R V K+ PF ++ DC + L+++P +G
Sbjct: 218 ELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRG 254
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 38/251 (15%)
Query: 204 KKFEATVTRLNPSSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRMLIYERLFH 262
K+ ATV +SQ K + D++ ++ ++ P G R+G + I L
Sbjct: 38 KRIRATV-----NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD---VWICMELMD 89
Query: 263 GSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321
SLD+ D G I + KIA+ + L LH + ++ + +N+ I+
Sbjct: 90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALG 147
Query: 322 SAKLSGYGCAGHI-----PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELL 376
K+ +G +G++ + D L + + KS++WS GI ++EL
Sbjct: 148 QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 207
Query: 377 TGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD---PQLKGRFPLKAARTVADIALR 433
R DS W PF +L +++ PQL K + D +
Sbjct: 208 ILRFPYDS-----------WGTPFQ----QLKQVVEEPSPQLPAD---KFSAEFVDFTSQ 249
Query: 434 CLQKEPSERPT 444
CL+K ERPT
Sbjct: 250 CLKKNSKERPT 260
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Query: 193 RASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252
+ FGD + + + + F+ + + + L+H NL +LLG +
Sbjct: 31 KGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGG 89
Query: 253 RMLIYERLFHGSLDRLIYGRSDGPPI-DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFS 311
++ E + GSL + Y RS G + + +K +L + + +L E F ++ + +
Sbjct: 90 LYIVTEYMAKGSL--VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNNF--VHRDLA 144
Query: 312 TANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIV 371
N+ + +D AK+S +G T E L + KS+VWSFGI+
Sbjct: 145 ARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 203
Query: 372 LLELLT 377
L E+ +
Sbjct: 204 LWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Query: 193 RASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252
+ FGD + + + + F+ + + + L+H NL +LLG +
Sbjct: 16 KGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG- 74
Query: 253 RMLIYERLFHGSLDRLIYGRSDGPPI-DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFS 311
++ E + GSL + Y RS G + + +K +L + + +L EG ++ + +
Sbjct: 75 LYIVTEYMAKGSL--VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGN-NFVHRDLA 129
Query: 312 TANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIV 371
N+ + +D AK+S +G T E L + KS+VWSFGI+
Sbjct: 130 ARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188
Query: 372 LLELLT 377
L E+ +
Sbjct: 189 LWEIYS 194
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 58 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 112
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 169
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 211
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 212 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 58 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 112
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGT 169
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 211
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 212 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 34/242 (14%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+++ + + HPN+ L G + M+I E + +GSLD + R +
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTK--CKPVMIITEYMENGSLDAFL--RKNDGRFTV 115
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + G+ +L + ++ + + NI ++ + K+S +G + + E D
Sbjct: 116 IQLVGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMS-RVLEDDPE 171
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIV+ E+++ +
Sbjct: 172 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE-------------- 217
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
RP+ D +I + R P+ + + L C QKE S+RP I L
Sbjct: 218 ---RPYW-DMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
Query: 453 DR 454
D+
Sbjct: 274 DK 275
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 61 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 115
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGT 172
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 214
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 215 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 63 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 117
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 216
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 217 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 61 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 115
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 172
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 214
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 215 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 34/242 (14%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+++ + + HPN+ L G + M+I E + +GSLD + R +
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTK--CKPVMIITEYMENGSLDAFL--RKNDGRFTV 109
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + G+ +L + ++ + + NI ++ + K+S +G + + E D
Sbjct: 110 IQLVGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMS-RVLEDDPE 165
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIV+ E+++ +
Sbjct: 166 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE-------------- 211
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
RP+ D +I + R P+ + + L C QKE S+RP I L
Sbjct: 212 ---RPYW-DMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
Query: 453 DR 454
D+
Sbjct: 268 DK 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 33/239 (13%)
Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLI-------YGRSDGPPIDWNTRVKI 286
QH N+ LLG G ++I E +G L + + DG P++ +
Sbjct: 108 QHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 287 ALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX 346
+ AQG+ FL + ++ + + N+ + AK+ +G A I
Sbjct: 166 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 347 ----XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402
E++ + T +S+VWS+GI+L E+ + N P +
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN---------------PYPGIL 267
Query: 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI--FEELDRQESRK 459
+ + ++ + P A + + I C EP+ RPT + I F + QE R+
Sbjct: 268 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 326
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 61 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 115
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 172
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 214
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 215 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 96/240 (40%), Gaps = 32/240 (13%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
+F+ + + H N+ +L G ++ M+I E + +G+LD+ + R
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISK--YKPMMIITEYMENGALDKFL--REKDGEFSVL 147
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI---PETD 338
V + A G+ +L ++ + + NI ++ + K+S +G + + PE
Sbjct: 148 QLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204
Query: 339 IXXXXXXX--XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396
E + T S+VWSFGIV+ E++T +
Sbjct: 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE---------------- 248
Query: 397 SRPF--LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
RP+ L++ + I D + P+ + + ++C Q+E + RP I LD+
Sbjct: 249 -RPYWELSNHEVMKAIND-GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 28/236 (11%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++FI + + L HP L +L G L++E + HG L Y R+
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSD--YLRTQRGLFAA 102
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE---T 337
T + + L +G+ +L E ++ + + N + ++ K+S +G + + T
Sbjct: 103 ETLLGMCLDVCEGMAYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 159
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397
E + KS+VWSFG+++ E+ + + + P E R S
Sbjct: 160 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS-----EGKIPYENR-----S 209
Query: 398 RPFLADDCRLSL-IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
+ +D + P+L A+ V I C ++ P +RP + +L
Sbjct: 210 NSEVVEDISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 34/242 (14%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++F+ + + + HPN+ L G + S M++ E + +GSLD + ++DG
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTK--SKPVMIVTEYMENGSLDTFL-KKNDGQ-FTV 123
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
V + + G+ +L + G ++ + + NI I+ + K+S +G + + E D
Sbjct: 124 IQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLS-RVLEDDPE 179
Query: 341 XXXXX------XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + T S+VWS+GIV+ E+++ +
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGE-------------- 225
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
RP+ + +I + R P+ + + L C QKE + RP I L
Sbjct: 226 ---RPYW-EMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
Query: 453 DR 454
D+
Sbjct: 282 DK 283
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 60 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 114
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 115 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 171
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 213
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 214 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 63 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 117
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 174
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 216
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 217 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 62 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 116
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 117 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 173
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 215
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 216 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 92/256 (35%), Gaps = 52/256 (20%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR---SDGPP 277
+EF ++ A LQHPN+ LLG +D +I+ HG L + R SD
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKD--QPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 131
Query: 278 IDWNTRVKIAL----------CAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
D + VK AL A G+ +L ++ + +T N+ + + K+S
Sbjct: 132 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISD 188
Query: 328 YGCAGHIPETD----IXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT------ 377
G + D + E + G + S++WS+G+VL E+ +
Sbjct: 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
Query: 378 -GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQ 436
G N D R ++ DDC V + + C
Sbjct: 249 CGYSNQDVVEMIRNRQVLP-----CPDDC------------------PAWVYALMIECWN 285
Query: 437 KEPSERPTMRSIFEEL 452
+ PS RP + I L
Sbjct: 286 EFPSRRPRFKDIHSRL 301
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 58 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 112
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 169
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 211
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 212 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 59 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 113
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGT 170
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 212
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 213 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 92/256 (35%), Gaps = 52/256 (20%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR---SDGPP 277
+EF ++ A LQHPN+ LLG +D +I+ HG L + R SD
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKD--QPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 114
Query: 278 IDWNTRVKIAL----------CAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327
D + VK AL A G+ +L ++ + +T N+ + + K+S
Sbjct: 115 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISD 171
Query: 328 YGCAGHIPETD----IXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT------ 377
G + D + E + G + S++WS+G+VL E+ +
Sbjct: 172 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
Query: 378 -GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQ 436
G N D R ++ DDC V + + C
Sbjct: 232 CGYSNQDVVEMIRNRQVLP-----CPDDC------------------PAWVYALMIECWN 268
Query: 437 KEPSERPTMRSIFEEL 452
+ PS RP + I L
Sbjct: 269 EFPSRRPRFKDIHSRL 284
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 59 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 113
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 170
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 212
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 213 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 33/238 (13%)
Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLI-------YGRSDGPPIDWNTRVKI 286
QH N+ LLG G ++I E +G L + + DG P++ +
Sbjct: 100 QHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 287 ALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX 346
+ AQG+ FL + ++ + + N+ + AK+ +G A I
Sbjct: 158 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 347 ----XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402
E++ + T +S+VWS+GI+L E+ + N P +
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN---------------PYPGIL 259
Query: 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI--FEELDRQESR 458
+ + ++ + P A + + I C EP+ RPT + I F + QE R
Sbjct: 260 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 317
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 33/250 (13%)
Query: 207 EATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL 265
+ V ++ Q +E + N+V + QH N+ ++ + + ++ ++ E L G+L
Sbjct: 72 QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEM--YKSYLVGEELWVLMEFLQGGAL 129
Query: 266 DRLIYGRSDGPPIDWNTRVKIALCAA--QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 323
++ + N +C A Q L +LH +G ++ + + +I + D
Sbjct: 130 TDIV------SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRV 180
Query: 324 KLSGYGCAGHIPETDIXXXXXXXXX---XXXETLERGLLTPKSNVWSFGIVLLELLTGRK 380
KLS +G I + D+ E + R L + ++WS GI+++E++ G
Sbjct: 181 KLSDFGFCAQISK-DVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239
Query: 381 NLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPS 440
S P + ++ S P P+LK K + + D R L ++P
Sbjct: 240 PYFSDSPVQAMKRLRDSPP-------------PKLKNSH--KVSPVLRDFLERMLVRDPQ 284
Query: 441 ERPTMRSIFE 450
ER T + + +
Sbjct: 285 ERATAQELLD 294
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 58 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 112
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 169
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 211
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 212 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 57 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 111
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 112 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 168
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 210
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 211 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 97/252 (38%), Gaps = 28/252 (11%)
Query: 205 KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGS 264
K + + + S +FI + + L HP L +L G L++E + HG
Sbjct: 51 KDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGC 108
Query: 265 LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324
L Y R+ T + + L +G+ +L E ++ + + N + ++ K
Sbjct: 109 LSD--YLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIK 163
Query: 325 LSGYGCAGHIPE---TDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKN 381
+S +G + + T E + KS+VWSFG+++ E+ +
Sbjct: 164 VSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS---- 219
Query: 382 LDSRHPKEERNLVKWSRPFLADDCRLSL-IMDPQLKGRFPLKAARTVADIALRCLQKEPS 440
+ + P E R S + +D + P+L A+ V I C ++ P
Sbjct: 220 -EGKIPYENR-----SNSEVVEDISTGFRLYKPRL-------ASTHVYQIMNHCWKERPE 266
Query: 441 ERPTMRSIFEEL 452
+RP + +L
Sbjct: 267 DRPAFSRLLRQL 278
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 36 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIIIEFMT 93
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 94 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 148
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 149 HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 209 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 252
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 253 NPSDRPSFAEIHQAFETMFQESSISDEVEK 282
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 58 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 112
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 169
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 211
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 212 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 28/236 (11%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++FI + + L HP L +L G L++E + HG L Y R+
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSD--YLRTQRGLFAA 102
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE---T 337
T + + L +G+ +L E ++ + + N + ++ K+S +G + + T
Sbjct: 103 ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 159
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397
E + KS+VWSFG+++ E+ + + + P E R S
Sbjct: 160 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS-----EGKIPYENR-----S 209
Query: 398 RPFLADDCRLSL-IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
+ +D + P+L A+ V I C ++ P +RP + +L
Sbjct: 210 NSEVVEDISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G + + + S D
Sbjct: 63 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTAT 117
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGT 174
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 216
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 217 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 89/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 58 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 112
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGT 169
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 211
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 212 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 87/225 (38%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G + + + S D
Sbjct: 63 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTAT 117
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 216
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 217 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 28/236 (11%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++FI + + L HP L +L G L++E + HG L Y R+
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSD--YLRTQRGLFAA 100
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE---T 337
T + + L +G+ +L E ++ + + N + ++ K+S +G + + T
Sbjct: 101 ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397
E + KS+VWSFG+++ E+ + + + P E R S
Sbjct: 158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS-----EGKIPYENR-----S 207
Query: 398 RPFLADDCRLSL-IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
+ +D + P+L A+ V I C ++ P +RP + +L
Sbjct: 208 NSEVVEDISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 61 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 115
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 172
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 214
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 215 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 61 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 115
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGT 172
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 214
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 215 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 58 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 112
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 169
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 211
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 212 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 28/236 (11%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++FI + + L HP L +L G L++E + HG L Y R+
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGCLSD--YLRTQRGLFAA 105
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE---T 337
T + + L +G+ +L E ++ + + N + ++ K+S +G + + T
Sbjct: 106 ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397
E + KS+VWSFG+++ E+ + + + P E R S
Sbjct: 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS-----EGKIPYENR-----S 212
Query: 398 RPFLADDCRLSL-IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
+ +D + P+L A+ V I C ++ P +RP + +L
Sbjct: 213 NSEVVEDISTGFRLYKPRL-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 55 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 109
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 110 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 166
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 208
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 209 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 11 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 68 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 122
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXXXXXX 350
L F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 123 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 115
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXXXXXX 350
L F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 102/255 (40%), Gaps = 32/255 (12%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
+EF+++ + + +HPN+ +L G S M++ E + +G+LD + R +
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVT--NSMPVMILTEFMENGALDSFL--RLNDGQFTV 115
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE---- 336
V + A G+ +L E ++ + + NI ++ + K+S +G + + E
Sbjct: 116 IQLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 172
Query: 337 ---TDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERN 392
T E + T S+ WS+GIV+ E+++ G + ++ N
Sbjct: 173 PTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN 232
Query: 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
++ D RL P ++ + L C QK+ + RP + L
Sbjct: 233 AIE-------QDYRLPP----------PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
Query: 453 DRQESRKSSSSTVRR 467
D+ +S V R
Sbjct: 276 DKMIRNPASLKIVAR 290
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 61 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 115
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT 172
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G+ PF A+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 214
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 215 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 87/225 (38%), Gaps = 26/225 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 63 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTAT 117
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + K++ +G + H P +
Sbjct: 118 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 174
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E K ++WS G++ E L G+ PF A+
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKP------------------PFEANTY 216
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
+ + +++ FP D+ R L+ PS+RP +R + E
Sbjct: 217 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 24/235 (10%)
Query: 225 NDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRV 284
+++ L +L H ++ K G G+ L+ E + GSL + S G
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIG-------LA 134
Query: 285 KIALCAAQ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
++ L A Q G+ +LH + ++ + + N+ +D D K+ +G A +PE
Sbjct: 135 QLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRH--PKEERNLV 394
E L+ S+VWSFG+ L ELLT + DS P + L+
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFLELI 248
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449
++ + RL+ +++ + P K V + C + E S RPT ++
Sbjct: 249 GIAQGQMT-VLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 102/255 (40%), Gaps = 32/255 (12%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
+EF+++ + + +HPN+ +L G S M++ E + +G+LD + R +
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVT--NSMPVMILTEFMENGALDSFL--RLNDGQFTV 117
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI------ 334
V + A G+ +L E ++ + + NI ++ + K+S +G + +
Sbjct: 118 IQLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 335 -PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERN 392
ET E + T S+ WS+GIV+ E+++ G + ++ N
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN 234
Query: 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
++ D RL P ++ + L C QK+ + RP + L
Sbjct: 235 AIE-------QDYRLPP----------PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
Query: 453 DRQESRKSSSSTVRR 467
D+ +S V R
Sbjct: 278 DKMIRNPASLKIVAR 292
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 16/201 (7%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY 270
T+LNP+S +++ +V + L HPN+ KL F + L+ E G + +
Sbjct: 51 TQLNPTS--LQKLFREVRIMKILNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLV 106
Query: 271 GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330
+ + + + A Q + H++ ++ + N+ +D D + K++ +G
Sbjct: 107 AHGRMKEKEARAKFRQIVSAVQ---YCHQK---YIVHRDLKAENLLLDGDMNIKIADFGF 160
Query: 331 AGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
+ + L +G P+ +VWS G++L L++G D ++ K
Sbjct: 161 SNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220
Query: 389 EERNLV---KWSRPF-LADDC 405
E R V K+ PF ++ DC
Sbjct: 221 ELRERVLRGKYRIPFYMSTDC 241
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 40 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 97
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 98 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 152
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 153 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 213 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 257 NPSDRPSFAEIHQAFETMFQESSISDEVEK 286
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 36 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 93
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 94 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 148
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 149 HLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 209 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 252
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 253 NPSDRPSFAEIHQAFETMFQESSISDEVEK 282
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 31/271 (11%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 33 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMT 90
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + + N + ++
Sbjct: 91 YGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 145
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 146 HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Query: 378 -GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQ 436
G P + L L D R+ P V ++ C Q
Sbjct: 206 YGMSPYPGIDPSQVYEL-------LEKDYRMER----------PEGCPEKVYELMRACWQ 248
Query: 437 KEPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 249 WNPSDRPSFAEIHQAFETMFQESSISDEVEK 279
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 48 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 105
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 106 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 160
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 161 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 221 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 264
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 265 NPSDRPSFAEIHQAFETMFQESSISDEVEK 294
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 37 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 94
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 95 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 149
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 150 HLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 210 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 253
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 254 NPSDRPSFAEIHQAFETMFQESSISDEVEK 283
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 14/208 (6%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGL 294
HPN+ KLL ++ L++E L D + G P+ L QGL
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLL--QGL 116
Query: 295 TFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXXE 352
F H + ++ + N+ I+ + + KL+ +G A +P E
Sbjct: 117 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 353 TLER-GLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 38/265 (14%)
Query: 218 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSD-G 275
Q + + + + SL H ++ +LLG GS + L+ + L GSL D + R G
Sbjct: 75 QSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQ-LVTQYLPLGSLLDHVRQHRGALG 131
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335
P + N V+IA +G+ +L E G ++ + N+ + +++ +G A +P
Sbjct: 132 PQLLLNWGVQIA----KGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 184
Query: 336 ETD----IXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER 391
D E++ G T +S+VWS+G+ + EL+T
Sbjct: 185 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG------------ 232
Query: 392 NLVKWSRPFLADDCRLSLIMDPQLKGRF---PLKAARTVADIALRCLQKEPSERPTMRSI 448
+ P+ RL+ + D KG P V + ++C + + RPT + +
Sbjct: 233 -----AEPYAG--LRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 285
Query: 449 FEELDRQESRKSSSSTVRRASVEGF 473
E R ++R S G
Sbjct: 286 ANEFTRMARDPPRYLVIKRESGPGI 310
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 115
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L+F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 116 LSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 37 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 94
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 95 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 149
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 150 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 210 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 253
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 254 NPSDRPSFAEIHQAFETMFQESSISDEVEK 283
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 37 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 94
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 95 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 149
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 150 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 210 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 253
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 254 NPSDRPSFAEIHQAFETMFQESSISDEVEK 283
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I EG + ++ A+ +S K A V +++ Q +E + N+V + QH N+ ++
Sbjct: 159 IGEGSTGIVCIAT----VRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 213
Query: 242 LGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
+++ D+ ++ E L G+L D + + R + I + L Q L+ LH +
Sbjct: 214 --YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ 266
Query: 301 GPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPETDIXXXXXXXXX-XXXETLERGL 358
G ++ + + +I + D KLS +G CA E E + R
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 359 LTPKSNVWSFGIVLLELLTG 378
P+ ++WS GI+++E++ G
Sbjct: 324 YGPEVDIWSLGIMVIEMVDG 343
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 281 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMT 338
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + N + ++
Sbjct: 339 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGEN 393
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 394 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 454 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 497
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 498 NPSDRPSFAEIHQAFETMFQESSISDEVEK 527
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 149 IINLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 316
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 317 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 11 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 68 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 122
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 123 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 115
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN 59
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 60 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 114
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + + G P+ L
Sbjct: 59 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXX 346
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 116 --QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 8 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 65 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 119
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 108/271 (39%), Gaps = 31/271 (11%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 33 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMT 90
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + + N + ++
Sbjct: 91 YGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 145
Query: 321 FSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + E+L + KS+VW+FG++L E+ T
Sbjct: 146 HLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Query: 378 -GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQ 436
G P + L L D R+ P V ++ C Q
Sbjct: 206 YGMSPYPGIDPSQVYEL-------LEKDYRMER----------PEGCPEKVYELMRACWQ 248
Query: 437 KEPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 249 WNPSDRPSFAEIHQAFETMFQESSISDEVEK 279
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 38/265 (14%)
Query: 218 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSD-G 275
Q + + + + SL H ++ +LLG GS + L+ + L GSL D + R G
Sbjct: 57 QSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQ-LVTQYLPLGSLLDHVRQHRGALG 113
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335
P + N V+IA +G+ +L E G ++ + N+ + +++ +G A +P
Sbjct: 114 PQLLLNWGVQIA----KGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166
Query: 336 ETD----IXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER 391
D E++ G T +S+VWS+G+ + EL+T
Sbjct: 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG------------ 214
Query: 392 NLVKWSRPFLADDCRLSLIMDPQLKGRF---PLKAARTVADIALRCLQKEPSERPTMRSI 448
+ P+ RL+ + D KG P V + ++C + + RPT + +
Sbjct: 215 -----AEPYAG--LRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267
Query: 449 FEELDRQESRKSSSSTVRRASVEGF 473
E R ++R S G
Sbjct: 268 ANEFTRMARDPPRYLVIKRESGPGI 292
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I EG + ++ A+ +S K A V +++ Q +E + N+V + QH N+ ++
Sbjct: 39 IGEGSTGIVCIAT----VRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 93
Query: 242 LGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
+++ D+ ++ E L G+L D + + R + I + L Q L+ LH +
Sbjct: 94 --YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ 146
Query: 301 GPFQAMYNEFSTANIQIDKDFSAKLSGYG-CA---GHIPETDIXXXXXXXXXXXXETLER 356
G ++ + + +I + D KLS +G CA +P E + R
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISR 201
Query: 357 GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416
P+ ++WS GI+++E++ G + P + +++ + P P+LK
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-------------PRLK 248
Query: 417 GRFPLKAARTVADIALRCLQKEPSERPT 444
K + ++ R L ++P++R T
Sbjct: 249 NLH--KVSPSLKGFLDRLLVRDPAQRAT 274
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLI 269
T+LN SS +++ +V + L HPN+ KL F + L+ E G + D L+
Sbjct: 50 TQLNSSS--LQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLV 105
Query: 270 YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329
+ G + R K + + + H++ ++ + N+ +D D + K++ +G
Sbjct: 106 ---AHGRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 330 CAGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHP 387
+ + L +G P+ +VWS G++L L++G D ++
Sbjct: 159 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
Query: 388 KEERNLV---KWSRPF-LADDC----RLSLIMDPQLKG 417
KE R V K+ PF ++ DC + LI++P +G
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRG 256
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLI 269
T+LN SS +++ +V + L HPN+ KL F + L+ E G + D L+
Sbjct: 50 TQLNSSS--LQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLV 105
Query: 270 YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329
+ G + R K + + + H++ ++ + N+ +D D + K++ +G
Sbjct: 106 ---AHGRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 330 CAGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHP 387
+ + L +G P+ +VWS G++L L++G D ++
Sbjct: 159 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
Query: 388 KEERNLV---KWSRPF-LADDC----RLSLIMDPQLKG 417
KE R V K+ PF ++ DC + LI++P +G
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRG 256
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 115
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 61 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCL--LDYVREHK 115
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 116 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 172
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 173 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 59
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 60 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 114
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + + G P+ L
Sbjct: 60 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXX 346
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 117 --QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + + G P+ L
Sbjct: 59 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXX 346
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 116 --QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLI 269
T+LN SS +++ +V + L HPN+ KL F + L+ E G + D L+
Sbjct: 50 TQLNSSS--LQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLV 105
Query: 270 YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329
+ G + R K + + + H++ ++ + N+ +D D + K++ +G
Sbjct: 106 ---AHGRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 330 CAGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHP 387
+ + L +G P+ +VWS G++L L++G D ++
Sbjct: 159 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
Query: 388 KEERNLV---KWSRPF-LADDC----RLSLIMDPQLKG 417
KE R V K+ PF ++ DC + LI++P +G
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRG 256
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 35 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIIIEFMT 92
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + + N + ++
Sbjct: 93 YGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 147
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 148 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 208 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 252 NPSDRPSFAEIHQAFETMFQESSISDEVEK 281
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 35 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIIIEFMT 92
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + + N + ++
Sbjct: 93 YGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 147
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 148 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 208 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 252 NPSDRPSFAEIHQAFETMFQESSISDEVEK 281
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 24/235 (10%)
Query: 225 NDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRV 284
+++ L +L H ++ K G G L+ E + GSL + S G
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG-------LA 117
Query: 285 KIALCAAQ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
++ L A Q G+ +LH + ++ + N+ +D D K+ +G A +PE
Sbjct: 118 QLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRH--PKEERNLV 394
E L+ S+VWSFG+ L ELLT + DS P + L+
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFLELI 231
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449
++ + RL+ +++ + P K V + C + E S RPT ++
Sbjct: 232 GIAQGQMT-VLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + + G P+ L
Sbjct: 59 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXX 346
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 116 --QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 58 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCL--LDYVREHK 112
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 113 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 169
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 170 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 59
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 60 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 114
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 115
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + + G P+ L
Sbjct: 58 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXX 346
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 115 --QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 169
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLI 269
T+LN SS +++ +V + L HPN+ KL F + L+ E G + D L+
Sbjct: 50 TQLNSSS--LQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLV 105
Query: 270 YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329
+ G + R K + + + H++ ++ + N+ +D D + K++ +G
Sbjct: 106 ---AHGRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 330 CAGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHP 387
+ + L +G P+ +VWS G++L L++G D ++
Sbjct: 159 FSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
Query: 388 KEERNLV---KWSRPF-LADDC----RLSLIMDPQLKG 417
KE R V K+ PF ++ DC + LI++P +G
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRG 256
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + + G P+ L
Sbjct: 58 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXX 347
QGL F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 115 --QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 169
Query: 348 XXXXETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 34/177 (19%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA--GHIPETDIXXXXXXXXXXX 350
GL FLH +G +Y + NI +DKD K++ +G + +
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIA 187
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E L + WSFG++L E+L G+ + +E + ++ PF
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF---------- 237
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSER----------PTMRSI-FEELDRQE 456
+P + D+ ++ +EP +R P R I +EEL+R+E
Sbjct: 238 --------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKE 286
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 58 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGXL--LDYVREHK 112
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 113 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 169
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 170 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 91 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 145
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 146 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 202
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 203 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 256
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCL--LDYVREHK 111
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + + G P+ L
Sbjct: 58 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXX 346
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 115 --QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 169
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 34/177 (19%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA--GHIPETDIXXXXXXXXXXX 350
GL FLH +G +Y + NI +DKD K++ +G + +
Sbjct: 130 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIA 186
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E L + WSFG++L E+L G+ + +E + ++ PF
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF---------- 236
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSER----------PTMRSI-FEELDRQE 456
+P + D+ ++ +EP +R P R I +EEL+R+E
Sbjct: 237 --------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKE 285
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLI 269
T+LN SS +++ +V + L HPN+ KL F + L+ E G + D L+
Sbjct: 50 TQLNSSS--LQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLV 105
Query: 270 YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329
+ G + R K + + + H++ ++ + N+ +D D + K++ +G
Sbjct: 106 ---AHGRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 330 CAGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHP 387
+ + L +G P+ +VWS G++L L++G D ++
Sbjct: 159 FSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
Query: 388 KEERNLV---KWSRPF-LADDC----RLSLIMDPQLKG 417
KE R V K+ PF ++ DC + LI++P +G
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRG 256
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 115
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXXXXXX 350
L F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCL--LDYVREHK 118
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I EG + ++ A+ +S K A V +++ Q +E + N+V + QH N+ ++
Sbjct: 37 IGEGSTGIVCIAT----VRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 91
Query: 242 LGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
+++ D+ ++ E L G+L D + + R + I + L Q L+ LH +
Sbjct: 92 --YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ 144
Query: 301 GPFQAMYNEFSTANIQIDKDFSAKLSGYG-CA---GHIPETDIXXXXXXXXXXXXETLER 356
G ++ + + +I + D KLS +G CA +P E + R
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISR 199
Query: 357 GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416
P+ ++WS GI+++E++ G + P + +++ + P P+LK
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-------------PRLK 246
Query: 417 GRFPLKAARTVADIALRCLQKEPSERPT 444
K + ++ R L ++P++R T
Sbjct: 247 NLH--KVSPSLKGFLDRLLVRDPAQRAT 272
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 40 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMT 97
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + + N + ++
Sbjct: 98 YGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 152
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 153 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 213 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 257 NPSDRPSFAEIHQAFETMFQESSISDEVEK 286
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCL--LDYVREHK 113
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 170
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I EG + ++ A+ +S K A V +++ Q +E + N+V + QH N+ ++
Sbjct: 82 IGEGSTGIVCIAT----VRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 136
Query: 242 LGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
+++ D+ ++ E L G+L D + + R + I + L Q L+ LH +
Sbjct: 137 --YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ 189
Query: 301 GPFQAMYNEFSTANIQIDKDFSAKLSGYG-CA---GHIPETDIXXXXXXXXXXXXETLER 356
G ++ + + +I + D KLS +G CA +P E + R
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--XLVGTPYWMAPELISR 244
Query: 357 GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416
P+ ++WS GI+++E++ G + P + +++ + P P+LK
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-------------PRLK 291
Query: 417 GRFPLKAARTVADIALRCLQKEPSERPT 444
K + ++ R L ++P++R T
Sbjct: 292 NLH--KVSPSLKGFLDRLLVRDPAQRAT 317
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 90 IINLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 146 LVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 257
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 258 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 302
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + + G P+ L
Sbjct: 60 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXX 346
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 117 --QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 67 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 121
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 122 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 178
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 179 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 232
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 59
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 60 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 114
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXXXXXX 350
L F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + + G P+ L
Sbjct: 61 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXX 346
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 118 --QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 172
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 115
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 239 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMT 296
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + N + ++
Sbjct: 297 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGEN 351
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 352 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 412 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 455
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 456 NPSDRPSFAEIHQAFETMFQESSISDEVEK 485
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 24/235 (10%)
Query: 225 NDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRV 284
+++ L +L H ++ K G G L+ E + GSL + S G
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG-------LA 117
Query: 285 KIALCAAQ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
++ L A Q G+ +LH + ++ + N+ +D D K+ +G A +PE
Sbjct: 118 QLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRH--PKEERNLV 394
E L+ S+VWSFG+ L ELLT + DS P + L+
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFLELI 231
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449
++ + RL+ +++ + P K V + C + E S RPT ++
Sbjct: 232 GIAQGQMT-VLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 115
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCL--LDYVREHK 114
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 172 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 59
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 60 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 114
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 35 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMT 92
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + + N + ++
Sbjct: 93 YGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 147
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 148 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 208 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 252 NPSDRPSFAEIHQAFETMFQESSISDEVEK 281
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 111
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 103 IINLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 270
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 271 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I EG + ++ A+ +S K A V +++ Q +E + N+V + QH N+ ++
Sbjct: 28 IGEGSTGIVCIAT----VRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 82
Query: 242 LGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
+++ D+ ++ E L G+L D + + R + I + L Q L+ LH +
Sbjct: 83 --YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ 135
Query: 301 GPFQAMYNEFSTANIQIDKDFSAKLSGYG-CA---GHIPETDIXXXXXXXXXXXXETLER 356
G ++ + + +I + D KLS +G CA +P E + R
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISR 190
Query: 357 GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416
P+ ++WS GI+++E++ G + P + +++ + P P+LK
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-------------PRLK 237
Query: 417 GRFPLKAARTVADIALRCLQKEPSERPT 444
K + ++ R L ++P++R T
Sbjct: 238 NLH--KVSPSLKGFLDRLLVRDPAQRAT 263
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 5 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 62 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 116
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXXXXXX 350
L F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 117 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 95 IINLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 151 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 262
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 263 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 307
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I EG + ++ A+ +S K A V +++ Q +E + N+V + QH N+ ++
Sbjct: 32 IGEGSTGIVCIAT----VRSSGKLVA-VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 86
Query: 242 LGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
+++ D+ ++ E L G+L D + + R + I + L Q L+ LH +
Sbjct: 87 --YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ 139
Query: 301 GPFQAMYNEFSTANIQIDKDFSAKLSGYG-CA---GHIPETDIXXXXXXXXXXXXETLER 356
G ++ + + +I + D KLS +G CA +P E + R
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISR 194
Query: 357 GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416
P+ ++WS GI+++E++ G + P + +++ + P P+LK
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-------------PRLK 241
Query: 417 GRFPLKAARTVADIALRCLQKEPSERPT 444
K + ++ R L ++P++R T
Sbjct: 242 NLH--KVSPSLKGFLDRLLVRDPAQRAT 267
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 92 IINLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 148 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 259
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 260 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 304
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 35 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 92
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + + N + ++
Sbjct: 93 YGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 147
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 148 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 208 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 252 NPSDRPSFAEIHQAFETMFQESSISDEVEK 281
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 114
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 172 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 111
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E L H L + + + G P+ L QG
Sbjct: 61 HPNIVKLLD--VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL--QG 115
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 232 SLQHPNLCKLLGFHARDGSDQRMLIYERLFH--GSLDRLIYGRSDGPPIDWNTRVKIALC 289
++H NL + + R + + L FH GSL + G I WN +A
Sbjct: 65 GMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAET 120
Query: 290 AAQGLTFLHEEGPF--------QAMYNEFSTANIQIDKDFSAKLSGYGCAGHI----PET 337
++GL++LHE+ P+ + +F + N+ + D +A L+ +G A P
Sbjct: 121 MSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPG 180
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKS-----NVWSFGIVLLELLTGRKNLDS 384
D E LE + + ++++ G+VL EL++ K D
Sbjct: 181 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG 232
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 63 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 117
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 118 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 174
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 175 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGXL--LDYVREHK 111
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 114
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 172 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 118
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 118/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 103 IINLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 270
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 271 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 118
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 54 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 108
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 109 DNIGSQYLLNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 165
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 166 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 219
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 82 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 136
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 137 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 193
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 194 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 247
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 113
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 170
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 51 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 105
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 106 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 162
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 114
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 115 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 172 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 103 IIHLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 270
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 271 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 103 IITLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 270
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 271 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 110/270 (40%), Gaps = 29/270 (10%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 242 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMT 299
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + N + ++
Sbjct: 300 YGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGEN 354
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 355 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 415 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 458
Query: 438 EPSERPTMRSIFEELDRQESRKSSSSTVRR 467
PS+RP+ I + + S S V +
Sbjct: 459 NPSDRPSFAEIHQAFETMFQESSISDEVEK 488
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 83/212 (39%), Gaps = 14/212 (6%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCA 290
L HPN+ KLL ++ L++E L D + G P+ L
Sbjct: 60 KELNHPNIVKLLD--VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL- 116
Query: 291 AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXXX 347
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 117 -QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 348 XXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 103 IINLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 270
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 271 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 111
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 14/212 (6%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCA 290
L HPN+ KLL ++ L++E L D + G P+ L
Sbjct: 59 KELNHPNIVKLLD--VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL- 115
Query: 291 AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXX 348
QGL F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 116 -QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 349 XXXETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 118/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 103 IINLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 270
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 271 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 40 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIIIEFMT 97
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 98 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 152
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 153 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 213 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 438 EPSERPTMRSIFEELD 453
PS+RP+ I + +
Sbjct: 257 NPSDRPSFAEIHQAFE 272
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCL--LDYVREHK 113
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 33/266 (12%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 33 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYIIIEFMT 90
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + + N + ++
Sbjct: 91 YGNL--LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 145
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 146 HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Query: 378 -GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQ 436
G P + L L D R+ P V ++ C Q
Sbjct: 206 YGMSPYPGIDPSQVYEL-------LEKDYRMER----------PEGCPEKVYELMRACWQ 248
Query: 437 KEPSERPTMRSIFEELDR--QESRKS 460
PS+RP+ I + + QES S
Sbjct: 249 WNPSDRPSFAEIHQAFETMFQESSIS 274
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCL--LDYVREHK 113
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 40 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 97
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 98 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 152
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 153 HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 213 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 438 EPSERPTMRSIFEELD 453
PS+RP+ I + +
Sbjct: 257 NPSDRPSFAEIHQAFE 272
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 61 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCL--LDYVREHK 115
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 116 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 172
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 173 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 28/236 (11%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
++FI + + L HP L +L G L+ E + HG L Y R+
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVTEFMEHGCLSD--YLRTQRGLFAA 103
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE---T 337
T + + L +G+ +L E ++ + + N + ++ K+S +G + + T
Sbjct: 104 ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397
E + KS+VWSFG+++ E+ + + + P E R S
Sbjct: 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS-----EGKIPYENR-----S 210
Query: 398 RPFLADDCRLSL-IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452
+ +D + P+L A+ V I C ++ P +RP + +L
Sbjct: 211 NSEVVEDISTGFRLYKPRL-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLI 269
T+LN SS +++ +V + L HPN+ KL F + L+ E G + D L+
Sbjct: 43 TQLNSSS--LQKLFREVRIMKVLNHPNIVKL--FEVIETEKTLYLVMEYASGGEVFDYLV 98
Query: 270 YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329
+ G + R K + + + H++ ++ + N+ +D D + K++ +G
Sbjct: 99 ---AHGWMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 151
Query: 330 CAGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHP 387
+ + L +G P+ +VWS G++L L++G D ++
Sbjct: 152 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 211
Query: 388 KEERNLV---KWSRPF-LADDC----RLSLIMDPQLKG 417
KE R V K+ PF ++ DC + LI++P +G
Sbjct: 212 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRG 249
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 40 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 97
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 98 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 152
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 153 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 213 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 438 EPSERPTMRSIFEELD 453
PS+RP+ I + +
Sbjct: 257 NPSDRPSFAEIHQAFE 272
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 99/251 (39%), Gaps = 38/251 (15%)
Query: 204 KKFEATVTRLNPSSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRMLIYERLFH 262
K+ ATV +SQ K + D++ + ++ P G R+G + I L
Sbjct: 65 KRIRATV-----NSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGD---VWICXELXD 116
Query: 263 GSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321
SLD+ D G I + KIA+ + L LH + ++ + +N+ I+
Sbjct: 117 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALG 174
Query: 322 SAKLSGYGCAGHI-----PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELL 376
K +G +G++ + D L + + KS++WS GI +EL
Sbjct: 175 QVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELA 234
Query: 377 TGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD---PQLKGRFPLKAARTVADIALR 433
R DS W PF +L +++ PQL K + D +
Sbjct: 235 ILRFPYDS-----------WGTPFQ----QLKQVVEEPSPQLPAD---KFSAEFVDFTSQ 276
Query: 434 CLQKEPSERPT 444
CL+K ERPT
Sbjct: 277 CLKKNSKERPT 287
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG ++ Y G+L Y R+ PP + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYAS--KGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 270
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 271 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
++ L +L H ++ K G G L+ E + GSL D P +
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL-------RDYLPRHCVGLAQ 113
Query: 286 IALCAAQ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
+ L A Q G+ +LH + ++ + N+ +D D K+ +G A +PE
Sbjct: 114 LLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 343 XXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
E L+ S+VWSFG+ L ELLT + S H K
Sbjct: 171 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTK 221
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
++ L +L H ++ K G G L+ E + GSL D P +
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL-------RDYLPRHCVGLAQ 112
Query: 286 IALCAAQ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
+ L A Q G+ +LH + ++ + N+ +D D K+ +G A +PE
Sbjct: 113 LLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 343 XXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK 388
E L+ S+VWSFG+ L ELLT + S H K
Sbjct: 170 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTK 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 43/255 (16%)
Query: 207 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
E ++R+ SS+ +E +V LA+++HPN+ + +GS ++ + G L
Sbjct: 56 EINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENGS--LYIVMDYCEGGDLF 111
Query: 267 RLIYGR-----SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321
+ I + + +DW ++ +AL LH + + NI + KD
Sbjct: 112 KRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHR---------DIKSQNIFLTKDG 162
Query: 322 SAKLSGYGCAGHIPETD--IXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
+ +L +G A + T E E KS++W+ G VL EL T +
Sbjct: 163 TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
Query: 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP---LKAARTVADIALRCLQ 436
++ K NLV L +I G FP L + + + + +
Sbjct: 223 HAFEAGSMK---NLV------------LKII-----SGSFPPVSLHYSYDLRSLVSQLFK 262
Query: 437 KEPSERPTMRSIFEE 451
+ P +RP++ SI E+
Sbjct: 263 RNPRDRPSVNSILEK 277
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 39 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 96
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 97 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 151
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 152 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 212 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 255
Query: 438 EPSERPTMRSIFEELD 453
PS+RP+ I + +
Sbjct: 256 NPSDRPSFAEIHQAFE 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 35 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 92
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 93 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 147
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 148 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 208 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 438 EPSERPTMRSIFEELD 453
PS+RP+ I + +
Sbjct: 252 NPSDRPSFAEIHQAFE 267
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 113
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 16/209 (7%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQ 234
NF I EG V+Y+A + T + RL+ ++GV I +++ L L
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 59
Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQG 293
HPN+ KLL ++ L++E + H L + + G P+ L QG
Sbjct: 60 HPNIVKLLD--VIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLL--QG 114
Query: 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXX 351
L F H + ++ + N+ I+ + + KL+ +G A +P
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 352 ETLER-GLLTPKSNVWSFGIVLLELLTGR 379
E L + ++WS G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 111
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 168
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG +I E G+L Y R+ PP + +
Sbjct: 103 IINLLGACTQDGP--LYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ +++ +G A I D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 270
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 271 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 16/213 (7%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALC 289
L HPN+ KLL ++ L++E L H L + + G P+ L
Sbjct: 60 KELNHPNIVKLLD--VIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXX 346
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 117 --QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEAT-VTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
+ + G +Y+ + D K A V R N S + KE +++ +A + P +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
+LLG + L+ + + +G L L + R + + + + A+G+++L +
Sbjct: 83 RLLGICL---TSTVQLVTQLMPYGCL--LDHVRENRGRLGSQDLLNWCMQIAKGMSYLED 137
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG--HIPETDIXXXXXXX--XXXXXETLE 355
+ ++ + + N+ + K++ +G A I ET+ E++
Sbjct: 138 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 356 RGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395
R T +S+VWS+G+ + EL+T G K D +E +L++
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + KE +++ +AS+ +P++C+LLG + LI + + G L L Y R
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCL--LDYVREHK 118
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
I + + A+G+ +L + + ++ + + N+ + K++ +G A +
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 175
Query: 335 ---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384
E E++ + T +S+VWS+G+ + EL+T G K D
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG R+ +I E +
Sbjct: 35 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMT 92
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + ++ + +A + + +L ++ ++ + + N + ++
Sbjct: 93 YGNL--LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 147
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 148 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 378 GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQK 437
S +P D ++ +++ + P V ++ C Q
Sbjct: 208 YGM---SPYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 438 EPSERPTMRSIFEELD 453
PS+RP+ I + +
Sbjct: 252 NPSDRPSFAEIHQAFE 267
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNL 238
+ +G V+ R + DA + K V L P + + +FI +VN + SL H NL
Sbjct: 26 LGDGSFGVVRRGEW--DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
+L G + ++ E GS LDRL R T + A+ A+G+ +L
Sbjct: 84 IRLYGVVL---TPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 298 HEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXX-----XXE 352
+ + ++ + + N+ + K+ +G +P+ D E
Sbjct: 138 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 353 TLERGLLTPKSNVWSFGIVLLELLT 377
+L+ + S+ W FG+ L E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNL 238
+ +G V+ R + DA + K V L P + + +FI +VN + SL H NL
Sbjct: 26 LGDGSFGVVRRGEW--DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
+L G + ++ E GS LDRL R T + A+ A+G+ +L
Sbjct: 84 IRLYGVVL---TPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 298 HEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXX-----XXE 352
+ + ++ + + N+ + K+ +G +P+ D E
Sbjct: 138 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 353 TLERGLLTPKSNVWSFGIVLLELLT 377
+L+ + S+ W FG+ L E+ T
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 124/325 (38%), Gaps = 67/325 (20%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNL 238
+ +G V+ R + DA + K V L P + + +FI +VN + SL H NL
Sbjct: 20 LGDGSFGVVRRGEW--DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
+L G + ++ E GS LDRL R T + A+ A+G+ +L
Sbjct: 78 IRLYGVVL---TPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 298 HEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXX-----XXE 352
+ + ++ + + N+ + K+ +G +P+ D E
Sbjct: 132 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 353 TLERGLLTPKSNVWSFGIVLLELLT-------GRKNLDSRHPKEERNLVKWSRPFLADDC 405
+L+ + S+ W FG+ L E+ T G H K ++ + RP +DC
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH-KIDKEGERLPRP---EDC 244
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---------------MRSI-- 448
PQ + ++ ++C +P +RPT MR++
Sbjct: 245 -------PQ-----------DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQD 286
Query: 449 FEELDRQESRKSSSSTVRRASVEGF 473
FEE D+ + + TV E +
Sbjct: 287 FEEPDKLHIQMNDVITVIEGRAENY 311
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 21/212 (9%)
Query: 177 FFSDRCISEGLSSVMYRASFGD-----DASTSKKFEATVTRLNPSSQGVKE--FINDVNT 229
FSDR + V+ + SFG+ D T ++ V Q + + +V
Sbjct: 29 IFSDRYKGQ---RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 85
Query: 230 LASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALC 289
L L HPN+ KL F G L+ E G L I R +D +I
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGY--FYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQ 140
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKLSGYGCAGHIPETDIXXXXXXX 346
G+T++H+ + ++ + N+ ++ KD + ++ +G + H +
Sbjct: 141 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 197
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ G K +VWS G++L LL+G
Sbjct: 198 AYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 109/280 (38%), Gaps = 36/280 (12%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLL 242
I G +Y+ + D + + ++P+ + + F N+V L +H N+ +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVK-----ILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 243 GFHARDGSDQRMLIYERLFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
G+ +D + I + G SL + ++ + + IA AQG+ +LH +
Sbjct: 99 GYMTKDN----LAIVTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK- 151
Query: 302 PFQAMYNEFSTANIQIDKDFSAKLSGYGCAG----HIPETDIXXXXXXXXXXXXETLERG 357
++ + + NI + + + K+ +G A + E +
Sbjct: 152 --NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 358 LLTP---KSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV-KWSRPFLADDCRLSLIMDP 413
P +S+V+S+GIVL EL+TG L H ++ R + + D
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGE--LPYSHINNRDQIIFMVGRGYASPDL-------S 260
Query: 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
+L P R VAD C++K ERP I ++
Sbjct: 261 KLYKNCPKAMKRLVAD----CVKKVKEERPLFPQILSSIE 296
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNL 238
+ +G V+ R + DA + K V L P + + +FI +VN + SL H NL
Sbjct: 16 LGDGSFGVVRRGEW--DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
+L G + ++ E GS LDRL R T + A+ A+G+ +L
Sbjct: 74 IRLYGVVL---TPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 298 HEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXX-----XXE 352
+ + ++ + + N+ + K+ +G +P+ D E
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 353 TLERGLLTPKSNVWSFGIVLLELLT 377
+L+ + S+ W FG+ L E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNL 238
+ +G V+ R + DA + K V L P + + +FI +VN + SL H NL
Sbjct: 20 LGDGSFGVVRRGEW--DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
+L G + ++ E GS LDRL R T + A+ A+G+ +L
Sbjct: 78 IRLYGVVL---TPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 298 HEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXX-----XXE 352
+ + ++ + + N+ + K+ +G +P+ D E
Sbjct: 132 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 353 TLERGLLTPKSNVWSFGIVLLELLT 377
+L+ + S+ W FG+ L E+ T
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 183 ISEG-LSSVMYRASFGDDASTSKKFEATVTRL---NPSSQGVKEFINDVNTLASL-QHPN 237
+ EG V+ + G D K+ ++ + + + + + ++++ + + +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---------------IDWNT 282
+ LLG +DG ++ Y G+L Y R+ PP + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYAS--KGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
V A+G+ +L + + ++ + + N+ + ++ K++ +G A I D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 343 XXX----XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E L + T +S+VWSFG+++ E+ T + P EE L K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFK--- 270
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454
L + R+ P + + C PS+RPT + + E+LDR
Sbjct: 271 -LLKEGHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNL 238
+ +G V+ R + DA + K V L P + + +FI +VN + SL H NL
Sbjct: 16 LGDGSFGVVRRGEW--DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
+L G + ++ E GS LDRL R T + A+ A+G+ +L
Sbjct: 74 IRLYGVVL---TPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 298 HEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXX-----XXE 352
+ + ++ + + N+ + K+ +G +P+ D E
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 353 TLERGLLTPKSNVWSFGIVLLELLT 377
+L+ + S+ W FG+ L E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNL 238
+ +G V+ R + DA + K V L P + + +FI +VN + SL H NL
Sbjct: 16 LGDGSFGVVRRGEW--DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 239 CKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
+L G + ++ E GS LDRL R T + A+ A+G+ +L
Sbjct: 74 IRLYGVVL---TPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 298 HEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXX-----XXE 352
+ + ++ + + N+ + K+ +G +P+ D E
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 353 TLERGLLTPKSNVWSFGIVLLELLT 377
+L+ + S+ W FG+ L E+ T
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 21/212 (9%)
Query: 177 FFSDRCISEGLSSVMYRASFGD-----DASTSKKFEATVTRLNPSSQGVKE--FINDVNT 229
FSDR + V+ + SFG+ D T ++ V Q + + +V
Sbjct: 46 IFSDRYKGQ---RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 102
Query: 230 LASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALC 289
L L HPN+ KL F G L+ E G L I R +D ++ L
Sbjct: 103 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 160
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKLSGYGCAGHIPETDIXXXXXXX 346
G+T++H+ + ++ + N+ ++ KD + ++ +G + H +
Sbjct: 161 ---GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 214
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ G K +VWS G++L LL+G
Sbjct: 215 AYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 30/253 (11%)
Query: 205 KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFH 262
+++ + + S EFI + + +L H L +L G + QR +I E + +
Sbjct: 48 QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK----QRPIFIITEYMAN 103
Query: 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322
G L L Y R +++ + + +L + Q ++ + + N ++
Sbjct: 104 GCL--LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGV 158
Query: 323 AKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
K+S +G + ++ ET E L + KS++W+FG+++ E+ +
Sbjct: 159 VKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 218
Query: 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEP 439
K R E + +A RL P L A+ V I C ++
Sbjct: 219 KMPYERFTNSE------TAEHIAQGLRL---YRPHL-------ASEKVYTIMYSCWHEKA 262
Query: 440 SERPTMRSIFEEL 452
ERPT + + +
Sbjct: 263 DERPTFKILLSNI 275
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 21/212 (9%)
Query: 177 FFSDRCISEGLSSVMYRASFGD-----DASTSKKFEATVTRLNPSSQGVKE--FINDVNT 229
FSDR + V+ + SFG+ D T ++ V Q + + +V
Sbjct: 47 IFSDRYKGQ---RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 103
Query: 230 LASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALC 289
L L HPN+ KL F G L+ E G L I R +D ++ L
Sbjct: 104 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 161
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKLSGYGCAGHIPETDIXXXXXXX 346
G+T++H+ + ++ + N+ ++ KD + ++ +G + H +
Sbjct: 162 ---GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 215
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ G K +VWS G++L LL+G
Sbjct: 216 AYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 211 TRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLI 269
T+LN SS +++ +V L HPN+ KL F + L+ E G + D L+
Sbjct: 50 TQLNSSS--LQKLFREVRIXKVLNHPNIVKL--FEVIETEKTLYLVXEYASGGEVFDYLV 105
Query: 270 YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329
+ G + R K + + + H++ ++ + N+ +D D + K++ +G
Sbjct: 106 ---AHGRXKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFG 158
Query: 330 CAGHIPETDIXXXXXXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHP 387
+ + L +G P+ +VWS G++L L++G D ++
Sbjct: 159 FSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
Query: 388 KEERNLV---KWSRPFL-ADDC----RLSLIMDPQLKG 417
KE R V K+ PF + DC + LI++P +G
Sbjct: 219 KELRERVLRGKYRIPFYXSTDCENLLKKFLILNPSKRG 256
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 87/230 (37%), Gaps = 25/230 (10%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S++ ++ I +V L L+HPN + G + R+ + L+ E + D L +
Sbjct: 94 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT--AWLVMEYCLGSASDLLEVHKK-- 149
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
P+ + A QGL +LH ++ + NI + + KL +G A +
Sbjct: 150 -PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
Query: 335 PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
P ++ G K +VWS GI +EL ER
Sbjct: 206 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL-------------AERKPP 252
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT 444
++ ++ ++ P L+ + R D CLQK P +RPT
Sbjct: 253 LFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD---SCLQKIPQDRPT 299
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 93/240 (38%), Gaps = 28/240 (11%)
Query: 215 PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD 274
P ++E I +++ + P++ K G + ++ ++ E GS+ +I R+
Sbjct: 63 PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTD--LWIVMEYCGAGSVSDIIRLRNK 120
Query: 275 GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334
+ + I +GL +LH + ++ + NI ++ + AKL+ +G AG +
Sbjct: 121 --TLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175
Query: 335 PETDIXXXXXXXXX----XXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE 390
TD E ++ +++WS GI +E+ G+ HP
Sbjct: 176 --TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA 233
Query: 391 RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
++ + P P R P + D +CL K P +R T + +
Sbjct: 234 IFMIPTNPP-------------PTF--RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 92/252 (36%), Gaps = 46/252 (18%)
Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLI--------------------YGRS 273
QH N+ LLG G ++I E +G L + +
Sbjct: 93 QHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333
DG P++ + + AQG+ FL + ++ + + N+ + AK+ +G A
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 334 IPETDIXXXXXXX----XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE 389
I E++ + T +S+VWS+GI+L E+ + N
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-------- 259
Query: 390 ERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI- 448
P + + + ++ + P A + + I C EP+ RPT + I
Sbjct: 260 -------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 312
Query: 449 -FEELDRQESRK 459
F + QE R+
Sbjct: 313 SFLQEQAQEDRR 324
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 21/212 (9%)
Query: 177 FFSDRCISEGLSSVMYRASFGD-----DASTSKKFEATVTRLNPSSQGVKE--FINDVNT 229
FSDR + V+ + SFG+ D T ++ V Q + + +V
Sbjct: 23 IFSDRYKGQ---RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 230 LASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALC 289
L L HPN+ KL F G L+ E G L I R +D ++ L
Sbjct: 80 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKLSGYGCAGHIPETDIXXXXXXX 346
G+T++H+ + ++ + N+ ++ KD + ++ +G + H +
Sbjct: 138 ---GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 191
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ G K +VWS G++L LL+G
Sbjct: 192 AYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 87/230 (37%), Gaps = 25/230 (10%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S++ ++ I +V L L+HPN + G + R+ + L+ E + D L +
Sbjct: 55 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT--AWLVMEYCLGSASDLLEVHKK-- 110
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334
P+ + A QGL +LH ++ + NI + + KL +G A +
Sbjct: 111 -PLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
Query: 335 PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
P ++ G K +VWS GI +EL ER
Sbjct: 167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL-------------AERKPP 213
Query: 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT 444
++ ++ ++ P L+ + R D CLQK P +RPT
Sbjct: 214 LFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD---SCLQKIPQDRPT 260
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 98/253 (38%), Gaps = 30/253 (11%)
Query: 205 KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFH 262
+++ + + S EFI + + +L H L +L G + QR +I E + +
Sbjct: 48 QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK----QRPIFIITEYMAN 103
Query: 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322
G L L Y R +++ + + +L + Q ++ + + N ++
Sbjct: 104 GCL--LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGV 158
Query: 323 AKLSGYGCAGHIPETDIXXXXXXXXXXXX---ETLERGLLTPKSNVWSFGIVLLELLTGR 379
K+S +G + ++ + + E L + KS++W+FG+++ E+ +
Sbjct: 159 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 218
Query: 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEP 439
K R E + +A RL P L A+ V I C ++
Sbjct: 219 KMPYERFTNSE------TAEHIAQGLRL---YRPHL-------ASEKVYTIMYSCWHEKA 262
Query: 440 SERPTMRSIFEEL 452
ERPT + + +
Sbjct: 263 DERPTFKILLSNI 275
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 14/212 (6%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCA 290
L HPN+ KLL ++ L++E L + G P+ L
Sbjct: 60 KELNHPNIVKLLD--VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL- 116
Query: 291 AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXXX 347
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 117 -QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 348 XXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 82/212 (38%), Gaps = 14/212 (6%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCA 290
L HPN+ KLL ++ L++E + + G P+ L
Sbjct: 60 KELNHPNIVKLLD--VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLL- 116
Query: 291 AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXXX 347
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 117 -QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 348 XXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 14/212 (6%)
Query: 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTL 230
+ NF I EG V+Y+A + T + RL+ ++GV I +++ L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCA 290
L HPN+ KLL ++ L++E L + G P+ L
Sbjct: 58 KELNHPNIVKLLD--VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL- 114
Query: 291 AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA---GHIPETDIXXXXXXXX 347
QGL F H + ++ + N+ I+ + + KL+ +G A G T
Sbjct: 115 -QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 348 XXXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
L + ++WS G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 22/176 (12%)
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX--- 346
A+G+ FL + ++ + + NI + K+ +G A HI
Sbjct: 177 VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 347 -XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E++ + T +S+VWS+GI L EL + L S P + D
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS----LGSS-----------PYPGMPVDS 278
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461
+ ++ + P A + DI C +P +RPT + I + +++Q S ++
Sbjct: 279 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + ++++I ++ LA+ HP + KLLG + DG + ++ E G++D ++ G
Sbjct: 56 SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIEFCPGGAVDAIMLELDRG 113
Query: 276 ---PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
P I R + + L FLH + + ++ + N+ + + +L+ +G +
Sbjct: 114 LTEPQIQVVCRQML-----EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA 165
Query: 333 HIPETDIXXXX-------XXXXXXXXETLERGLLTPKSNVWSFGIVLLEL 375
+T ET++ K+++WS GI L+E+
Sbjct: 166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 98/253 (38%), Gaps = 30/253 (11%)
Query: 205 KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFH 262
+++ + + S EFI + + +L H L +L G + QR +I E + +
Sbjct: 28 QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK----QRPIFIITEYMAN 83
Query: 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322
G L L Y R +++ + + +L + Q ++ + + N ++
Sbjct: 84 GCL--LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGV 138
Query: 323 AKLSGYGCAGHIPETDIXXXXXXXXXXXX---ETLERGLLTPKSNVWSFGIVLLELLTGR 379
K+S +G + ++ + + E L + KS++W+FG+++ E+ +
Sbjct: 139 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 198
Query: 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEP 439
K R E + +A RL P L A+ V I C ++
Sbjct: 199 KMPYERFTNSE------TAEHIAQGLRL---YRPHL-------ASEKVYTIMYSCWHEKA 242
Query: 440 SERPTMRSIFEEL 452
ERPT + + +
Sbjct: 243 DERPTFKILLSNI 255
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 98/253 (38%), Gaps = 30/253 (11%)
Query: 205 KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFH 262
+++ + + S EFI + + +L H L +L G + QR +I E + +
Sbjct: 32 QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK----QRPIFIITEYMAN 87
Query: 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322
G L L Y R +++ + + +L + Q ++ + + N ++
Sbjct: 88 GCL--LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGV 142
Query: 323 AKLSGYGCAGHIPETDIXXXXXXXXXXXX---ETLERGLLTPKSNVWSFGIVLLELLTGR 379
K+S +G + ++ + + E L + KS++W+FG+++ E+ +
Sbjct: 143 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 202
Query: 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEP 439
K R E + +A RL P L A+ V I C ++
Sbjct: 203 KMPYERFTNSE------TAEHIAQGLRL---YRPHL-------ASEKVYTIMYSCWHEKA 246
Query: 440 SERPTMRSIFEEL 452
ERPT + + +
Sbjct: 247 DERPTFKILLSNI 259
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 98/253 (38%), Gaps = 30/253 (11%)
Query: 205 KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFH 262
+++ + + S EFI + + +L H L +L G + QR +I E + +
Sbjct: 33 QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK----QRPIFIITEYMAN 88
Query: 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322
G L L Y R +++ + + +L + Q ++ + + N ++
Sbjct: 89 GCL--LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGV 143
Query: 323 AKLSGYGCAGHIPETDIXXXXXXXXXXXX---ETLERGLLTPKSNVWSFGIVLLELLTGR 379
K+S +G + ++ + + E L + KS++W+FG+++ E+ +
Sbjct: 144 VKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 203
Query: 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEP 439
K R E + +A RL P L A+ V I C ++
Sbjct: 204 KMPYERFTNSE------TAEHIAQGLRL---YRPHL-------ASEKVYTIMYSCWHEKA 247
Query: 440 SERPTMRSIFEEL 452
ERPT + + +
Sbjct: 248 DERPTFKILLSNI 260
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 21/172 (12%)
Query: 285 KIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET-----DI 339
KI L + L L E + ++ + +NI +D+ + KL +G +G + ++ D
Sbjct: 129 KITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 340 XXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399
+ R +S+VWS GI L EL TGR +P KW+
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR----FPYP-------KWNSV 235
Query: 400 FLADDCRLSLIMD-PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450
F D + D PQL + + + + CL K+ S+RP + + +
Sbjct: 236 F--DQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 98/253 (38%), Gaps = 30/253 (11%)
Query: 205 KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFH 262
+++ + + S EFI + + +L H L +L G + QR +I E + +
Sbjct: 39 QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK----QRPIFIITEYMAN 94
Query: 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322
G L L Y R +++ + + +L + Q ++ + + N ++
Sbjct: 95 GCL--LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGV 149
Query: 323 AKLSGYGCAGHIPETDIXXXXXXXXXXXX---ETLERGLLTPKSNVWSFGIVLLELLTGR 379
K+S +G + ++ + + E L + KS++W+FG+++ E+ +
Sbjct: 150 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 209
Query: 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEP 439
K R E + +A RL P L A+ V I C ++
Sbjct: 210 KMPYERFTNSE------TAEHIAQGLRL---YRPHL-------ASEKVYTIMYSCWHEKA 253
Query: 440 SERPTMRSIFEEL 452
ERPT + + +
Sbjct: 254 DERPTFKILLSNI 266
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 39/245 (15%)
Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLI-----------YGRSDGPPIDWNT 282
QH N+ LLG G ++I E +G L + Y S P ++
Sbjct: 108 QHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 283 R--VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIX 340
R + + AQG+ FL + ++ + + N+ + AK+ +G A I
Sbjct: 166 RDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 341 XXXXXX----XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396
E++ + T +S+VWS+GI+L E+ + N
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN--------------- 267
Query: 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI--FEELDR 454
P + + + ++ + P A + + I C EP+ RPT + I F +
Sbjct: 268 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 327
Query: 455 QESRK 459
QE R+
Sbjct: 328 QEDRR 332
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S + ++++I ++ LA+ HP + KLLG + DG + ++ E G++D ++ G
Sbjct: 48 SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIEFCPGGAVDAIMLELDRG 105
Query: 276 ---PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332
P I R + + L FLH + + ++ + N+ + + +L+ +G +
Sbjct: 106 LTEPQIQVVCRQML-----EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA 157
Query: 333 HIPETDIXXXX-------XXXXXXXXETLERGLLTPKSNVWSFGIVLLEL 375
+T ET++ K+++WS GI L+E+
Sbjct: 158 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 28/175 (16%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
S++ ++F + L HPN+ +LG + LI +GSL +++ ++
Sbjct: 47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF 106
Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS--------- 326
+D + VK AL A+G FLH P + ++ ++ ID+D +A++S
Sbjct: 107 V-VDQSQAVKFALDXARGXAFLHTLEPLIPRH-ALNSRSVXIDEDXTARISXADVKFSFQ 164
Query: 327 ----GYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
Y A PE +T R ++ WSF ++L EL+T
Sbjct: 165 SPGRXYAPAWVAPEA--------LQKKPEDTNRRS-----ADXWSFAVLLWELVT 206
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 98/253 (38%), Gaps = 30/253 (11%)
Query: 205 KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFH 262
+++ + + S EFI + + +L H L +L G + QR +I E + +
Sbjct: 33 QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK----QRPIFIITEYMAN 88
Query: 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322
G L L Y R +++ + + +L + Q ++ + + N ++
Sbjct: 89 GCL--LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGV 143
Query: 323 AKLSGYGCAGHIPETDIXXXXXXXXXXXX---ETLERGLLTPKSNVWSFGIVLLELLTGR 379
K+S +G + ++ + + E L + KS++W+FG+++ E+ +
Sbjct: 144 VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 203
Query: 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEP 439
K R E + +A RL P L A+ V I C ++
Sbjct: 204 KMPYERFTNSE------TAEHIAQGLRL---YRPHL-------ASEKVYTIMYSCWHEKA 247
Query: 440 SERPTMRSIFEEL 452
ERPT + + +
Sbjct: 248 DERPTFKILLSNI 260
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPID 279
++F ++ L +L + K G G L+ E L G L D L R+ +D
Sbjct: 56 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LD 112
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP-ETD 338
+ + + +G+ +L G + ++ + + NI ++ + K++ +G A +P + D
Sbjct: 113 ASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 169
Query: 339 IXXXXXXXXX----XXXETLERGLLTPKSNVWSFGIVLLELLT 377
E+L + + +S+VWSFG+VL EL T
Sbjct: 170 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPID 279
++F ++ L +L + K G G + L+ E L G L D L R+ +D
Sbjct: 53 RDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LD 109
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP-ETD 338
+ + + +G+ +L G + ++ + + NI ++ + K++ +G A +P + D
Sbjct: 110 ASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 166
Query: 339 IXXXXXXXXX----XXXETLERGLLTPKSNVWSFGIVLLELLT 377
E+L + + +S+VWSFG+VL EL T
Sbjct: 167 XXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPID 279
++F ++ L +L + K G G L+ E L G L D L R+ +D
Sbjct: 57 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LD 113
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP-ETD 338
+ + + +G+ +L G + ++ + + NI ++ + K++ +G A +P + D
Sbjct: 114 ASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 170
Query: 339 IXXXXXXXXX----XXXETLERGLLTPKSNVWSFGIVLLELLT 377
E+L + + +S+VWSFG+VL EL T
Sbjct: 171 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 24/160 (15%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNT--LASLQHPNLCK 240
I G +Y+ S + K F S + FIN+ N + ++H N+ +
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVF---------SFANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 241 LLGFHARDGSDQRM---LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
+ R +D RM L+ E +GSL + + + DW + ++A +GL +L
Sbjct: 72 FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYL 127
Query: 298 HEEGPFQAMYN------EFSTANIQIDKDFSAKLSGYGCA 331
H E P Y + ++ N+ + D + +S +G +
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 21/212 (9%)
Query: 177 FFSDRCISEGLSSVMYRASFGD-----DASTSKKFEATVTRLNPSSQGVKE--FINDVNT 229
FSDR + V+ + SFG+ D T ++ V Q + + +V
Sbjct: 23 IFSDRYKGQ---RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 230 LASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALC 289
L L HPN+ KL F G L+ E G L I R +D ++ L
Sbjct: 80 LKQLDHPNIXKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKLSGYGCAGHIPETDIXXXXXXX 346
G+T+ H+ + ++ + N+ ++ KD + ++ +G + H +
Sbjct: 138 ---GITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGT 191
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ G K +VWS G++L LL+G
Sbjct: 192 AYYIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPID 279
++F ++ L +L + K G G L+ E L G L D L R+ +D
Sbjct: 69 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LD 125
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP-ETD 338
+ + + +G+ +L G + ++ + + NI ++ + K++ +G A +P + D
Sbjct: 126 ASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182
Query: 339 IXXXXXXXXX----XXXETLERGLLTPKSNVWSFGIVLLELLT 377
E+L + + +S+VWSFG+VL EL T
Sbjct: 183 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 12/170 (7%)
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
+ LA + HP + KL +A + LI + L G L + R + VK
Sbjct: 82 DILADVNHPFVVKL--HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 135
Query: 288 LCA-AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI--PETDIXXXXX 344
L A GL LH G +Y + NI +D++ KL+ +G + E
Sbjct: 136 LAELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCG 192
Query: 345 XXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + R + ++ WS+G+++ E+LTG + KE L+
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 35/263 (13%)
Query: 193 RASFGDDASTSKKF---EATVTRLNPSSQGVKE---FINDVNTLASLQHPNLCKLLGFHA 246
+ SFG+ + E V +N +S K+ + +V L L HPN+ KL F
Sbjct: 32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL--FEI 89
Query: 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAM 306
+ S ++ E G L I R D +I G+T++H+ +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARIIKQVFSGITYMHKH---NIV 143
Query: 307 YNEFSTANIQID---KDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ + NI ++ KD K+ +G + + + RG K
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKC 203
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G++L LL+G + PF + L K F L
Sbjct: 204 DVWSAGVILYILLSG------------------TPPFYGKNEYDILKRVETGKYAFDLPQ 245
Query: 424 ARTVADIALRCLQKEPSERPTMR 446
RT++D A ++K + P++R
Sbjct: 246 WRTISDDAKDLIRKMLTFHPSLR 268
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 35/263 (13%)
Query: 193 RASFGDDASTSKKF---EATVTRLNPSSQGVKE---FINDVNTLASLQHPNLCKLLGFHA 246
+ SFG+ + E V +N +S K+ + +V L L HPN+ KL F
Sbjct: 32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL--FEI 89
Query: 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAM 306
+ S ++ E G L I R D +I G+T++H+ +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD---AARIIKQVFSGITYMHKH---NIV 143
Query: 307 YNEFSTANIQID---KDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKS 363
+ + NI ++ KD K+ +G + + + RG K
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKC 203
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G++L LL+G + PF + L K F L
Sbjct: 204 DVWSAGVILYILLSG------------------TPPFYGKNEYDILKRVETGKYAFDLPQ 245
Query: 424 ARTVADIALRCLQKEPSERPTMR 446
RT++D A ++K + P++R
Sbjct: 246 WRTISDDAKDLIRKMLTFHPSLR 268
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/201 (17%), Positives = 79/201 (39%), Gaps = 11/201 (5%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
+R + EG +Y + + + + + ++F+++ + +L HP++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + + +I E +G L Y + + T V +L + + +L
Sbjct: 89 KLIGIIEEEPT---WIIMELYPYGELGH--YLERNKNSLKVLTLVLYSLQICKAMAYLES 143
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---XXXXXXETLER 356
++ + + NI + KL +G + +I + D E++
Sbjct: 144 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 357 GLLTPKSNVWSFGIVLLELLT 377
T S+VW F + + E+L+
Sbjct: 201 RRFTTASDVWMFAVCMWEILS 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 26/229 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRV 284
++ L SL HPN+ K+ F + ++ E G L +R++ ++ G +
Sbjct: 70 EIEVLKSLDHPNIIKI--FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA 127
Query: 285 KIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS----AKLSGYGCAGHIPETDIX 340
++ L + H + ++ + NI + +D S K+ +G A +
Sbjct: 128 ELMKQMMNALAYFHSQ---HVVHKDLKPENI-LFQDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 341 XXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF 400
+ + +T K ++WS G+V+ LLTG +E + + P
Sbjct: 184 TNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN 243
Query: 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449
A +CR + PQ D+ + L K+P RP+ +
Sbjct: 244 YAVECR---PLTPQ------------AVDLLKQMLTKDPERRPSAAQVL 277
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/201 (17%), Positives = 79/201 (39%), Gaps = 11/201 (5%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
+R + EG +Y + + + + + ++F+++ + +L HP++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + + +I E +G L Y + + T V +L + + +L
Sbjct: 73 KLIGIIEEEPT---WIIMELYPYGELGH--YLERNKNSLKVLTLVLYSLQICKAMAYLES 127
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---XXXXXXETLER 356
++ + + NI + KL +G + +I + D E++
Sbjct: 128 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 357 GLLTPKSNVWSFGIVLLELLT 377
T S+VW F + + E+L+
Sbjct: 185 RRFTTASDVWMFAVCMWEILS 205
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGRKN------LDSRHPKEERNLVKWSRPFLADDC 405
E+L G+ T KS+VWS+GI+L E+ + N +D+ K +N K +PF A +
Sbjct: 244 ESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATE- 302
Query: 406 RLSLIM 411
+ +IM
Sbjct: 303 EIYIIM 308
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 20/150 (13%)
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLT--P 361
++ + N+ +D +AK++ +G + + + + + G L P
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 362 KSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPL 421
+ ++WS G++L LL G D H P L R + P+
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHV-----------PTLFKKIRGGVFYIPEY------ 233
Query: 422 KAARTVADIALRCLQKEPSERPTMRSIFEE 451
R+VA + + LQ +P +R T++ I E
Sbjct: 234 -LNRSVATLLMHMLQVDPLKRATIKDIREH 262
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLL-GFHARDGSDQRMLIYERLFHGSLDRLIYGRSD 274
S + +++++ +++ LAS HPN+ KLL F+ + ++ E G++D ++
Sbjct: 47 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN---LWILIEFCAGGAVDAVMLELE- 102
Query: 275 GPPIDWNTRVKIALCAAQ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
P+ T +I + Q L +LH+ + ++ + NI D KL+ +G +
Sbjct: 103 -RPL---TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 155
Query: 332 GHIPETDIXX--------XXXXXXXXXXETLERGLLTPKSNVWSFGIVLLEL 375
T I ET + K++VWS GI L+E+
Sbjct: 156 AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 39/265 (14%)
Query: 193 RASFGD-----DASTSKKFEATVTRLNPSSQGVKE---FINDVNTLASLQHPNLCKLLGF 244
+ SFG+ D T +++ V +N +S K+ + +V L L HPN+ KL F
Sbjct: 32 KGSFGEVLKCKDRITQQEYAVKV--INKASAKNKDTSTILREVELLKKLDHPNIMKL--F 87
Query: 245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQ 304
+ S ++ E G L I R D +K G+T++H+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS---GITYMHKHN--- 141
Query: 305 AMYNEFSTANIQID---KDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTP 361
++ + NI ++ KD K+ +G + + + RG
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 362 KSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPL 421
K +VWS G++L LL+G + K E +++K K F L
Sbjct: 202 KCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETG---------------KYAFDL 243
Query: 422 KAARTVADIALRCLQKEPSERPTMR 446
RT++D A ++K + P++R
Sbjct: 244 PQWRTISDDAKDLIRKMLTFHPSLR 268
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/201 (17%), Positives = 79/201 (39%), Gaps = 11/201 (5%)
Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
+R + EG +Y + + + + + ++F+++ + +L HP++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + + +I E +G L Y + + T V +L + + +L
Sbjct: 77 KLIGIIEEEPT---WIIMELYPYGELGH--YLERNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---XXXXXXETLER 356
++ + + NI + KL +G + +I + D E++
Sbjct: 132 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 357 GLLTPKSNVWSFGIVLLELLT 377
T S+VW F + + E+L+
Sbjct: 189 RRFTTASDVWMFAVCMWEILS 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 75 KLIGVITENPV---WIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES 129
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---XXXXXXETLER 356
+ + ++ + + N+ + + KL +G + ++ ++ E++
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 20/150 (13%)
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLT--P 361
++ + N+ +D +AK++ +G + + + + + G L P
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 362 KSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPL 421
+ ++WS G++L LL G D H P L R + P+
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHV-----------PTLFKKIRGGVFYIPEY------ 233
Query: 422 KAARTVADIALRCLQKEPSERPTMRSIFEE 451
R+VA + + LQ +P +R T++ I E
Sbjct: 234 -LNRSVATLLMHMLQVDPLKRATIKDIREH 262
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 22/156 (14%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPETDIXXXXXXXXXXXX 351
L +LHE G +Y + N+ +D + KL+ YG C + D
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 352 ETLERGLLTPKS-NVWSFGIVLLELLTGRKNLD----SRHPKEERNLVKWSRPFLADDCR 406
+ RG S + W+ G+++ E++ GR D S +P + +D
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----------TEDYL 238
Query: 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER 442
+I++ Q+ R P + A + L K+P ER
Sbjct: 239 FQVILEKQI--RIPRSMSVKAASVLKSFLNKDPKER 272
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 22/156 (14%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPETDIXXXXXXXXXXXX 351
L +LHE G +Y + N+ +D + KL+ YG C + D
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 352 ETLERGLLTPKS-NVWSFGIVLLELLTGRKNLD----SRHPKEERNLVKWSRPFLADDCR 406
+ RG S + W+ G+++ E++ GR D S +P + +D
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----------TEDYL 270
Query: 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER 442
+I++ Q+ R P + A + L K+P ER
Sbjct: 271 FQVILEKQI--RIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 94/240 (39%), Gaps = 32/240 (13%)
Query: 224 INDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRL-IYGRSDGPPIDWNT 282
+ ++ L L+H NL LL + + L++E + H LD L ++ +D+
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKK--KKRWYLVFEFVDHTILDDLELFPNG----LDYQV 125
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA------GHIPE 336
K G+ F H ++ + NI + + KL +G A G + +
Sbjct: 126 VQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182
Query: 337 TDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGR------KNLDSRHPKEE 390
++ ++ G +VW+ G ++ E+ G ++D +
Sbjct: 183 DEVATRWYRAPELLVGDVKYG---KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMM 239
Query: 391 --RNLVKWSRPFLADDCRLSLIMDPQLKGRFPL-----KAARTVADIALRCLQKEPSERP 443
NL+ + + + + P++K R PL K + V D+A +CL +P +RP
Sbjct: 240 CLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 77 KLIGVITENPV---WIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES 131
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLER 356
+ + ++ + + N+ + + KL +G + ++ ++ E++
Sbjct: 132 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 188
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 72 KLIGVITENPV---WIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES 126
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLER 356
+ + ++ + + N+ + + KL +G + ++ ++ E++
Sbjct: 127 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 183
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 84/200 (42%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 75 KLIGVITENPV---WIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLES 129
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLER 356
+ + ++ + + N+ + + KL +G + ++ ++ E++
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINF 186
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 455 KLIGVITENPV---WIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLES 509
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLER 356
+ + ++ + + N+ + + KL +G + ++ ++ E++
Sbjct: 510 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 78 KLIGVITENPV---WIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES 132
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLER 356
+ + ++ + + N+ + + KL +G + ++ ++ E++
Sbjct: 133 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 189
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 22/156 (14%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPETDIXXXXXXXXXXXX 351
L +LHE G +Y + N+ +D + KL+ YG C + D
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 178
Query: 352 ETLERGLLTPKS-NVWSFGIVLLELLTGRKNLD----SRHPKEERNLVKWSRPFLADDCR 406
+ RG S + W+ G+++ E++ GR D S +P + +D
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----------TEDYL 227
Query: 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER 442
+I++ Q+ R P + A + L K+P ER
Sbjct: 228 FQVILEKQI--RIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 37/243 (15%)
Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPID---------WNTR- 283
QH N+ LLG G ++I E +G L + +S D +TR
Sbjct: 108 QHENIVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 284 -VKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXX 342
+ + AQG+ FL + ++ + + N+ + AK+ +G A I
Sbjct: 166 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 343 XXXX----XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398
E++ + T +S+VWS+GI+L E+ + N
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN---------------PY 267
Query: 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI--FEELDRQE 456
P + + + ++ + P A + + I C EP+ RPT + I F + QE
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
Query: 457 SRK 459
R+
Sbjct: 328 DRR 330
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 75 KLIGVITENPV---WIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES 129
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---XXXXXXETLER 356
+ + ++ + + N+ + + KL +G + ++ ++ E++
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 278
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 279 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 12/170 (7%)
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
+ L + HP + KL +A + LI + L G L + R + VK
Sbjct: 78 DILVEVNHPFIVKL--HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 131
Query: 288 LCA-AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI--PETDIXXXXX 344
L A L LH G +Y + NI +D++ KL+ +G + E
Sbjct: 132 LAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 188
Query: 345 XXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + R T ++ WSFG+++ E+LTG + KE ++
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 22/156 (14%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPETDIXXXXXXXXXXXX 351
L +LHE G +Y + N+ +D + KL+ YG C + D
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 174
Query: 352 ETLERGLLTPKS-NVWSFGIVLLELLTGRKNLD----SRHPKEERNLVKWSRPFLADDCR 406
+ RG S + W+ G+++ E++ GR D S +P + +D
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----------TEDYL 223
Query: 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER 442
+I++ Q+ R P + A + L K+P ER
Sbjct: 224 FQVILEKQI--RIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 278
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 279 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 103 KLIGVITENPV---WIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES 157
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLER 356
+ + ++ + + N+ + + KL +G + ++ ++ E++
Sbjct: 158 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 214
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 215 RRFTSASDVWMFGVCMWEIL 234
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 218 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP 277
+ +K F +V+ + L H N+ ++ D D L+ E + +L Y S GP
Sbjct: 53 ETLKRFEREVHNSSQLSHQNIVSMIDVDEED--DCYYLVMEYIEGPTLSE--YIESHGP- 107
Query: 278 IDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337
+ +T + G+ H+ + ++ + NI ID + + K+ +G A + ET
Sbjct: 108 LSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164
Query: 338 DIXXXXXXXXXXXXETLE--RGLLTPK-SNVWSFGIVLLELLTG 378
+ + E +G T + ++++S GIVL E+L G
Sbjct: 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 80 KLIGVITENPV---WIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES 134
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLER 356
+ + ++ + + N+ + + KL +G + ++ ++ E++
Sbjct: 135 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 191
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 15/161 (9%)
Query: 223 FINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFHGSLDRLIYGRSDGPPIDW 280
+++V L L HPN+ KL F D+R L+ E G L I R +D
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFF----EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA 123
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKLSGYGCAGHIPET 337
+K L G T+LH+ ++ + N+ ++ +D K+ +G + H
Sbjct: 124 AVIMKQVL---SGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 177
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ R K +VWS G++L LL G
Sbjct: 178 GKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 304
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 305 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/221 (18%), Positives = 91/221 (41%), Gaps = 29/221 (13%)
Query: 164 NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVK 221
N + ++ C NF S R +G+ YR K+ + + L ++ +
Sbjct: 10 NLLIADIELGCGNFGSVR---QGV----YRMR-------KKQIDVAIKVLKQGTEKADTE 55
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + + L +P + +L+G ++ ML+ E G L + + G+ + P+ +
Sbjct: 56 EMMREAQIMHQLDNPYIVRLIGVCQ---AEALMLVMEMAGGGPLHKFLVGKREEIPV--S 110
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
++ + G+ +L E+ ++ + + N+ + AK+S +G + + D
Sbjct: 111 NVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY 167
Query: 342 XXXXX-----XXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
E + + +S+VWS+G+ + E L+
Sbjct: 168 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 278
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 279 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 281
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 282 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 255
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 256 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 270
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 271 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 264
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 265 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 264
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 265 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 24/176 (13%)
Query: 290 AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX--- 346
AQG+ FL + ++ + + N+ + AK+ +G A I
Sbjct: 173 VAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 347 -XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E++ + T +S+VWS+GI+L E+ + N P + +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN---------------PYPGILVNS 274
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI--FEELDRQESRK 459
+ ++ + P A + + I C EP+ RPT + I F + QE R+
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 263
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 264 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411
E++ + T +S+VWS+GI L EL + L P + D + ++
Sbjct: 240 ESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYPGMPVDSKFYKMI 284
Query: 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461
+ P A + DI C +P +RPT + I + +++Q S ++
Sbjct: 285 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411
E++ + T +S+VWS+GI L EL + L P + D + ++
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYPGMPVDSKFYKMI 261
Query: 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461
+ P A + DI C +P +RPT + I + +++Q S ++
Sbjct: 262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 264
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 265 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 263
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 264 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 280
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 281 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 91/240 (37%), Gaps = 36/240 (15%)
Query: 223 FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNT 282
F + ++ L H +L +L + D+ +L+ E + GSLD + + I W
Sbjct: 59 FFEAASMMSKLSHKHL--VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS--------AKLSGYGCAGHI 334
V L AA + FL E ++ NI + ++ KLS G + +
Sbjct: 117 EVAKQLAAA--MHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 335 PETDIXXXXXXXXXXXXETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNL 393
DI E +E L ++ WSFG L E+ +G
Sbjct: 172 LPKDILQERIPWVPP--ECIENPKNLNLATDKWSFGTTLWEICSGG-------------- 215
Query: 394 VKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
+P A D + L + + P A +A++ C+ EP RP+ R+I +L+
Sbjct: 216 ---DKPLSALDSQRKLQFYED-RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E G+ T K++ WSFG++L E+ + G S+ +E F+ R
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-------FVTSGGR---- 290
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453
MDP P V I +C Q +P +RP I E ++
Sbjct: 291 MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 25/187 (13%)
Query: 273 SDG---PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329
SDG PI + + A+G+ FL + ++ + + NI + ++ K+ +G
Sbjct: 188 SDGFYKEPITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFG 244
Query: 330 CAGHIPETDIXXXXXXX----XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSR 385
A I + E++ + + KS+VWS+G++L E+ +
Sbjct: 245 LARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS-------- 296
Query: 386 HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM 445
L P + D + ++ R P + + I L C ++P ERP
Sbjct: 297 -------LGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRF 349
Query: 446 RSIFEEL 452
+ E+L
Sbjct: 350 AELVEKL 356
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/221 (18%), Positives = 90/221 (40%), Gaps = 29/221 (13%)
Query: 164 NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVK 221
N + ++ C NF S R +G+ YR K+ + + L ++ +
Sbjct: 336 NLLIADIELGCGNFGSVR---QGV----YRMR-------KKQIDVAIKVLKQGTEKADTE 381
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + + L +P + +L+G ++ ML+ E G L + + G+ + P+ +
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGVCQ---AEALMLVMEMAGGGPLHKFLVGKREEIPV--S 436
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
++ + G+ +L E+ ++ + N+ + AK+S +G + + D
Sbjct: 437 NVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493
Query: 342 XXXXX-----XXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
E + + +S+VWS+G+ + E L+
Sbjct: 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 209 TVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFHGSLD 266
+ + + S+ + + +V L L HPN+ KL F D+R L+ E G L
Sbjct: 69 IIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF----EDKRNYYLVMECYKGGELF 124
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI---DKDFSA 323
I R +D +K L G+T+LH+ ++ + N+ + +KD
Sbjct: 125 DEIIHRMKFNEVDAAVIIKQVLS---GVTYLHKHN---IVHRDLKPENLLLESKEKDALI 178
Query: 324 KLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
K+ +G + + R K +VWS G++L LL G
Sbjct: 179 KIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 33/216 (15%)
Query: 230 LASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA-- 287
L+ + HP + ++ G + Q +I + + G L L+ P N K
Sbjct: 60 LSIVTHPFIIRMWG--TFQDAQQIFMIMDYIEGGELFSLLRKSQRFP----NPVAKFYAA 113
Query: 288 -LCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX 346
+C A L +LH + +Y + NI +DK+ K++ +G A ++P+
Sbjct: 114 EVCLA--LEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-TYXLCGTP 167
Query: 347 XXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406
E + + WSFGI++ E+L G P + N +K
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT------PFYDSNTMK----------T 211
Query: 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER 442
I++ +L RFP V D+ R + ++ S+R
Sbjct: 212 YEKILNAEL--RFPPFFNEDVKDLLSRLITRDLSQR 245
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411
E++ + T +S+VWS+GI L EL + L P + D + ++
Sbjct: 235 ESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYPGMPVDSKFYKMI 279
Query: 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461
+ P A + DI C +P +RPT + I + +++Q S ++
Sbjct: 280 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 329
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFH--GSLDRLIYGRSDGPPIDWNTR 283
+V +L ++H N+ + +G R S L FH GSL + + WN
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV----VSWNEL 123
Query: 284 VKIALCAAQGLTFLHEEGPF-------QAMYNEFSTANIQIDKDFSAKLSGYGCA 331
IA A+GL +LHE+ P + + + N+ + + +A ++ +G A
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411
E++ + T +S+VWS+GI L EL + L P + D + ++
Sbjct: 233 ESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYPGMPVDSKFYKMI 277
Query: 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461
+ P A + DI C +P +RPT + I + +++Q S ++
Sbjct: 278 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 327
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 12/170 (7%)
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
+ L + HP + KL +A + LI + L G L + R + VK
Sbjct: 79 DILVEVNHPFIVKL--HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 132
Query: 288 LC-AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI--PETDIXXXXX 344
L A L LH G +Y + NI +D++ KL+ +G + E
Sbjct: 133 LAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 189
Query: 345 XXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + R T ++ WSFG+++ E+LTG + KE ++
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 82/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 75 KLIGVITENPV---WIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLES 129
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX---XXXXXXETLER 356
+ + ++ + + N+ + KL +G + ++ ++ E++
Sbjct: 130 K---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 12/170 (7%)
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
+ L + HP + KL +A + LI + L G L + R + VK
Sbjct: 78 DILVEVNHPFIVKL--HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY 131
Query: 288 LC-AAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI--PETDIXXXXX 344
L A L LH G +Y + NI +D++ KL+ +G + E
Sbjct: 132 LAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 188
Query: 345 XXXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
E + R T ++ WSFG+++ E+LTG + KE ++
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKL 241
I EG + ++ A+ + T K + V +++ Q +E + N+V + H N+ +
Sbjct: 53 IGEGSTGIVCIAT---EKHTGK--QVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 242 LGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
+ + D+ ++ E L G+L D + + R + I + L + L++LH +
Sbjct: 108 --YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLHNQ 160
Query: 301 GPFQAMYNEFSTANIQIDKDFSAKLSGYG-CA---GHIPETDIXXXXXXXXXXXXETLER 356
G ++ + + +I + D KLS +G CA +P+ E + R
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR--KXLVGTPYWMAPEVISR 215
Query: 357 GLLTPKSNVWSFGIVLLELLTG 378
+ ++WS GI+++E++ G
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 82/200 (41%), Gaps = 13/200 (6%)
Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
RCI EG +++ + + + A T N +S V+E F+ + T+ HP++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
KL+G + +I E G L + R +D + + A + L +L
Sbjct: 455 KLIGVITENPV---WIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLES 509
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXX---XXXXXETLER 356
+ + ++ + + N+ + KL +G + ++ ++ E++
Sbjct: 510 K---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 357 GLLTPKSNVWSFGIVLLELL 376
T S+VW FG+ + E+L
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 20/203 (9%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQHPNLCKL 241
+ EG V+Y+A S + RL+ +G+ I +++ L L HPN+ L
Sbjct: 29 VGEGTYGVVYKAK----DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 242 LG-FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAA-QGLTFLHE 299
+ H+ E+ LD G D +++KI L +G+ H+
Sbjct: 85 IDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQD-------SQIKIYLYQLLRGVAHCHQ 137
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXXETLERG 357
+ ++ + N+ I+ D + KL+ +G A IP + L
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 358 LLTPKS-NVWSFGIVLLELLTGR 379
S ++WS G + E++TG+
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 15/161 (9%)
Query: 223 FINDVNTLASLQHPNLCKLLGFHARDGSDQR--MLIYERLFHGSLDRLIYGRSDGPPIDW 280
+++V L L HPN+ KL F D+R L+ E G L I R +D
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFF----EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA 106
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKLSGYGCAGHIPET 337
+K L G T+LH+ ++ + N+ ++ +D K+ +G + H
Sbjct: 107 AVIMKQVL---SGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 160
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ R K +VWS G++L LL G
Sbjct: 161 GKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 20/203 (9%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQHPNLCKL 241
+ EG V+Y+A S + RL+ +G+ I +++ L L HPN+ L
Sbjct: 29 VGEGTYGVVYKAK----DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 242 LG-FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAA-QGLTFLHE 299
+ H+ E+ LD G D +++KI L +G+ H+
Sbjct: 85 IDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQD-------SQIKIYLYQLLRGVAHCHQ 137
Query: 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETDIXXXXXXXXXXXXETLERG 357
+ ++ + N+ I+ D + KL+ +G A IP + L
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 358 LLTPKS-NVWSFGIVLLELLTGR 379
S ++WS G + E++TG+
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ G+G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLL-GFHARDGSDQRMLIYERLFHGSLDRLIYGRSD 274
S + +++++ +++ LAS HPN+ KLL F+ + ++ E G++D ++
Sbjct: 74 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN---LWILIEFCAGGAVDAVMLELE- 129
Query: 275 GPPIDWNTRVKIALCAAQ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
P+ T +I + Q L +LH+ + ++ + NI D KL+ +G +
Sbjct: 130 -RPL---TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
Query: 332 GH----IPETDIXXXXXXXXXXXXETLERGLLTP---KSNVWSFGIVLLEL 375
I D E P K++VWS GI L+E+
Sbjct: 183 AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 40/242 (16%)
Query: 223 FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNT 282
F + ++ L H +L +L + D+ +L+ E + GSLD + + I W
Sbjct: 59 FFEAASMMSKLSHKHL--VLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 283 RVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS--------AKLSGYGCAGHI 334
++++A A + FL E ++ NI + ++ KLS G + +
Sbjct: 115 KLEVAKQLAWAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 335 PETDIXXXXXXXXXXXXETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNL 393
DI E +E L ++ WSFG L E+ +G
Sbjct: 172 LPKDILQERIPWVPP--ECIENPKNLNLATDKWSFGTTLWEICSGG-------------- 215
Query: 394 VKWSRPFLADDC--RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451
+P A D +L D + + P A +A++ C+ EP RP+ R+I +
Sbjct: 216 ---DKPLSALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD 269
Query: 452 LD 453
L+
Sbjct: 270 LN 271
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 85/226 (37%), Gaps = 26/226 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 62 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTAT 116
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + + K++ +G + H P +
Sbjct: 117 YITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGT 173
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G PF A
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP------------------PFEAHTY 215
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451
+ + +++ FP D+ R L+ S+R T+ + E
Sbjct: 216 QETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 85/226 (37%), Gaps = 26/226 (11%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
+V + L+HPN+ +L G+ + + LI E G++ R + S D
Sbjct: 62 EVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTAT 116
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
A L++ H + + ++ + N+ + + K++ +G + H P +
Sbjct: 117 YITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGT 173
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405
E +E + K ++WS G++ E L G PF A
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP------------------PFEAHTY 215
Query: 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451
+ + +++ FP D+ R L+ S+R T+ + E
Sbjct: 216 QETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA--GHIPETDIXXXXXXXXXXX 350
L FLH++G +Y + N+ +D + KL+ +G G
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIA 192
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E L+ L P + W+ G++L E+L G
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 43/220 (19%)
Query: 218 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD-----------QRMLIYERLFHGSLD 266
Q VK + ++ + L H N+ K+ GS + I + L
Sbjct: 50 QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLA 109
Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-KDFSAKL 325
++ GP ++ + R+ +GL ++H ++ + AN+ I+ +D K+
Sbjct: 110 NVL---EQGPLLEEHARL-FMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKI 162
Query: 326 SGYGCA----------GHIPETDIXXXXXXXXXXXXETLERGLLTPKS-----NVWSFGI 370
+G A GH+ E + R LL+P + ++W+ G
Sbjct: 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRS---------PRLLLSPNNYTKAIDMWAAGC 213
Query: 371 VLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
+ E+LTG+ H E+ L+ S P + ++ R L+
Sbjct: 214 IFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELL 253
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 204 KKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261
KK+ TV L + V+EF+ + + ++HPNL +LLG + ++ E +
Sbjct: 54 KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLE--PPFYIVTEYMP 111
Query: 262 HGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320
+G+L L Y R + + + +A + + +L ++ ++ + + N + ++
Sbjct: 112 YGNL--LDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 166
Query: 321 FSAKLSGYGCAGHI---PETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
K++ +G + + T E+L + KS+VW+FG++L E+ T
Sbjct: 167 HVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLL-GFHARDGSDQRMLIYERLFHGSLDRLIYGRSD 274
S + +++++ +++ LAS HPN+ KLL F+ + ++ E G++D ++
Sbjct: 74 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN---LWILIEFCAGGAVDAVMLELE- 129
Query: 275 GPPIDWNTRVKIALCAAQ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
P+ T +I + Q L +LH+ + ++ + NI D KL+ +G +
Sbjct: 130 -RPL---TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
Query: 332 GH----IPETDIXXXXXXXXXXXXETLERGLLTP---KSNVWSFGIVLLEL 375
I D E P K++VWS GI L+E+
Sbjct: 183 AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLL-GFHARDGSDQRMLIYERLFHGSLDRLIYGRSD 274
S + +++++ +++ LAS HPN+ KLL F+ + ++ E G++D ++
Sbjct: 74 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN---LWILIEFCAGGAVDAVMLELE- 129
Query: 275 GPPIDWNTRVKIALCAAQ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
P+ T +I + Q L +LH+ + ++ + NI D KL+ +G +
Sbjct: 130 -RPL---TESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
Query: 332 GH----IPETDIXXXXXXXXXXXXETLERGLLTP---KSNVWSFGIVLLEL 375
I D E P K++VWS GI L+E+
Sbjct: 183 AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 111/292 (38%), Gaps = 27/292 (9%)
Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH 235
NF ++ I G S +YRA+ D + + L ++ + I +++ L L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM-DAKARADCIKEIDLLKQLNH 91
Query: 236 PNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLI-YGRSDGPPIDWNTRVK--IALCAAQ 292
PN+ K D ++ ++ E G L R+I + + I T K + LC+A
Sbjct: 92 PNVIKYYASFIED--NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA- 148
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE--TDIXXXXXXXXXXX 350
L +H + M+ + AN+ I KL G T
Sbjct: 149 -LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMS 204
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410
E + KS++WS G +L E+ L S ++ NL + + C
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAA----LQSPFYGDKMNLYSLCKKI--EQCDY--- 255
Query: 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSS 462
P L + R + ++ C+ +P +RP + +++ R + +SS
Sbjct: 256 --PPLPSDHYSEELRQLVNM---CINPDPEKRPDVTYVYDVAKRMHACTASS 302
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ YG A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 7/159 (4%)
Query: 223 FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY-GRSDGPPID-- 279
+++VN L L+HPN+ + + ++ E G L +I G + +D
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI 339
+ RV L A +G ++ + AN+ +D + KL +G A I D
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDT 170
Query: 340 XXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLEL 375
E + R KS++WS G +L EL
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 7/159 (4%)
Query: 223 FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY-GRSDGPPID-- 279
+++VN L L+HPN+ + + ++ E G L +I G + +D
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI 339
+ RV L A +G ++ + AN+ +D + KL +G A I D
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDT 170
Query: 340 XXXXXXX---XXXXXETLERGLLTPKSNVWSFGIVLLEL 375
E + R KS++WS G +L EL
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 5/158 (3%)
Query: 223 FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY-GRSDGPPID-- 279
+++VN L L+HPN+ + + ++ E G L +I G + +D
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI--PET 337
+ RV L A +G ++ + AN+ +D + KL +G A + E
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED 171
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLEL 375
E + R KS++WS G +L EL
Sbjct: 172 FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 75/218 (34%), Gaps = 28/218 (12%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
++ A L HPN+ +L + R IY L + L D
Sbjct: 73 EIEIQAHLHHPNILRLYNYFY-----DRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT 127
Query: 286 IALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXX 345
I A L + H + + ++ + N+ + K++ +G + H P
Sbjct: 128 IMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGT 184
Query: 346 XXXXXXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDS-RHPKEERNLVKWSRPFLADD 404
E +E + K ++W G++ ELL G +S H + R +VK
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVK--------- 235
Query: 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER 442
+ +FP D+ + L+ PSER
Sbjct: 236 ----------VDLKFPASVPTGAQDLISKLLRHNPSER 263
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 119/300 (39%), Gaps = 46/300 (15%)
Query: 166 PLDEVA--AACHNFFSDR----CISEGLSSVMYRA---SFGDDASTSKKFEATVTRLNPS 216
P DE+ AA F+ I G+SSV+ R + G + + K E T RL+P
Sbjct: 79 PEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAV-KIMEVTAERLSPE 137
Query: 217 S-QGVKEFIN-DVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
+ V+E + + L + HP++ L+ + + S L+++ + G L Y
Sbjct: 138 QLEEVREATRRETHILRQVAGHPHIITLID--SYESSSFMFLVFDLMRKGEL--FDYLTE 193
Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333
+ TR I + ++FLH ++ + NI +D + +LS +G + H
Sbjct: 194 KVALSEKETR-SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCH 249
Query: 334 I-PETDIXXXXXXXXXXXXETLERGL------LTPKSNVWSFGIVLLELLTGRKNLDSRH 386
+ P + E L+ + + ++W+ G++L LL G
Sbjct: 250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF---- 305
Query: 387 PKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAAR--TVADIALRCLQKEPSERPT 444
W R + L +IM+ Q + P R TV D+ R LQ +P R T
Sbjct: 306 ---------WHRRQI---LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT 353
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 12/177 (6%)
Query: 224 INDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---IDW 280
I +++ + L+H N+ +L + ++ L++E L + + R+ G ++
Sbjct: 51 IREISLMKELKHENIVRL--YDVIHTENKLTLVFE-FMDNDLKKYMDSRTVGNTPRGLEL 107
Query: 281 NTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH--IPETD 338
N QGL F HE + ++ + N+ I+K KL +G A IP
Sbjct: 108 NLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164
Query: 339 IXXXXXXXXXXXXETLERGLLTPKS-NVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
+ L S ++WS G +L E++TG+ + +E+ L+
Sbjct: 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
GL FLH+ G +Y + N+ +D + K++ +G C H+ +
Sbjct: 132 GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIA 188
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE 389
E + + W++G++L E+L G+ D E
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 203
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH E +Y + N+ +DKD K++ +G C I + +
Sbjct: 260 ALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 202
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 188
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 188
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 188
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 211
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH E +Y + N+ +DKD K++ +G C I + +
Sbjct: 263 ALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 165 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 221
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 189
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 212
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 190
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 189
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH E +Y + N+ +DKD K++ +G C I + +
Sbjct: 122 ALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 135 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 191
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 204
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 197
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 199
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 204
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH E +Y + N+ +DKD K++ +G C I + +
Sbjct: 120 ALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 203
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 212
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 204
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 211
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH E +Y + N+ +DKD K++ +G C I + +
Sbjct: 121 ALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPE 212
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 215
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H G ++ + N+ +++D K+ +G A H + ++
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH-ADAEMTGYVVTRWYRAP 192
Query: 352 ETLERGLLTPKS-NVWSFGIVLLELLTGR 379
E + + ++ ++WS G ++ E+LTG+
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPE 215
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPE 194
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPE 188
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPE 198
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H G ++ + N+ +++D K+ +G A H + ++
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH-ADAEMTGYVVTRWYRAP 210
Query: 352 ETLERGLLTPKS-NVWSFGIVLLELLTGR 379
E + + ++ ++WS G ++ E+LTG+
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 233 LQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQ 292
L+H N+ + LG + +G + + E++ GSL L+ RS P+ N + I Q
Sbjct: 76 LKHKNIVQYLGSFSENGFIK--IFMEQVPGGSLSALL--RSKWGPLKDNEQT-IGFYTKQ 130
Query: 293 ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSA--KLSGYGC----AGHIPETDIXXXX 343
GL +LH+ Q ++ + N+ I+ +S K+S +G AG P T+
Sbjct: 131 ILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTE--TFT 184
Query: 344 XXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGR 379
E +++G +++WS G ++E+ TG+
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXE 352
G+ + H ++ + N+ +D +AK++ +G + + + +
Sbjct: 128 GVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAP 184
Query: 353 TLERGLLT--PKSNVWSFGIVLLELLTGRKNLDSRH 386
+ G L P+ ++WS G++L LL G D H
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220
>pdb|3OQM|A Chain A, Structure Of Ccpa-Hpr-Ser46p-Acka2 Complex
pdb|3OQM|C Chain C, Structure Of Ccpa-Hpr-Ser46p-Acka2 Complex
pdb|3OQN|A Chain A, Structure Of Ccpa-Hpr-Ser46-P-Gntr-Down Cre
pdb|3OQN|C Chain C, Structure Of Ccpa-Hpr-Ser46-P-Gntr-Down Cre
Length = 339
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSS 462
D+ RLSL++ PQL ++ + +A+R L K ++ P I E R E RKS+
Sbjct: 275 DNTRLSLMVRPQLSTV--VQPTYDIGAVAMRLLTKLMNKEPVEEHIVELPHRIELRKSTK 332
Query: 463 S 463
S
Sbjct: 333 S 333
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 17/167 (10%)
Query: 218 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE-----RLFHGSLDRLIYGR 272
+ V F ++ + SL HPN+ +L + + + L+ E LF + + ++
Sbjct: 65 EDVDRFKQEIEIMKSLDHPNIIRL--YETFEDNTDIYLVMELCTGGELFERVVHKRVFRE 122
Query: 273 SDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
SD I + +A C L H + P ++ + D KL +G A
Sbjct: 123 SDAARIMKDVLSAVAYC--HKLNVAHRDLKPENFLF-------LTDSPDSPLKLIDFGLA 173
Query: 332 GHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ + GL P+ + WS G+++ LL G
Sbjct: 174 ARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2FEP|A Chain A, Structure Of Truncated Ccpa In Complex With P-Ser-Hpr And
Sulfate Ions
Length = 289
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSS 462
D+ RLSL++ PQL ++ + +A+R L K ++ P I E R E RKS+
Sbjct: 231 DNTRLSLMVRPQLSTV--VQPTYDIGAVAMRLLTKLMNKEPVEEHIVELPHRIELRKSTK 288
Query: 463 S 463
S
Sbjct: 289 S 289
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 17/167 (10%)
Query: 218 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE-----RLFHGSLDRLIYGR 272
+ V F ++ + SL HPN+ +L + + + L+ E LF + + ++
Sbjct: 48 EDVDRFKQEIEIMKSLDHPNIIRL--YETFEDNTDIYLVMELCTGGELFERVVHKRVFRE 105
Query: 273 SDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
SD I + +A C L H + P ++ + D KL +G A
Sbjct: 106 SDAARIMKDVLSAVAYC--HKLNVAHRDLKPENFLF-------LTDSPDSPLKLIDFGLA 156
Query: 332 GHIPETDIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ + GL P+ + WS G+++ LL G
Sbjct: 157 ARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 233 LQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQ 292
L+H N+ + LG + +G + + E++ GSL L+ RS P+ N + I Q
Sbjct: 62 LKHKNIVQYLGSFSENGFIK--IFMEQVPGGSLSALL--RSKWGPLKDNEQT-IGFYTKQ 116
Query: 293 ---GLTFLHEEGPFQAMYNEFSTANIQIDKDFSA--KLSGYG----CAGHIPETDIXXXX 343
GL +LH+ Q ++ + N+ I+ +S K+S +G AG P T+
Sbjct: 117 ILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTE--TFT 170
Query: 344 XXXXXXXXETLERG--LLTPKSNVWSFGIVLLELLTGR 379
E +++G +++WS G ++E+ TG+
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 470
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 471 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
E + + KS+VWSFG+++ E +
Sbjct: 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 471
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 472 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLELLT 377
E + + KS+VWSFG+++ E +
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXXETLERGLLT--P 361
+ ++ + N+ +D + + K++ +G + + + + + G L P
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 362 KSNVWSFGIVLLELLTGRKNLDS 384
+ +VWS GIVL +L GR D
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|3OQO|A Chain A, Ccpa-Hpr-Ser46p-Syn Cre
pdb|3OQO|C Chain C, Ccpa-Hpr-Ser46p-Syn Cre
Length = 339
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSS 462
D+ RLSL++ PQL ++ + +A+R L K ++ P I E R E RKS+
Sbjct: 275 DNTRLSLMVRPQLSTV--VQPTYDIGAVAMRLLTKLMNKEPVEEHIVELPHRIELRKSTK 332
Query: 463 S 463
+
Sbjct: 333 A 333
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 13/161 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E N+++ L SL HPN+ KL F + L+ E G L I R D
Sbjct: 92 EIYNEISLLKSLDHPNIIKL--FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---FSAKLSGYGCAGHI-PET 337
+K L G+ +LH+ ++ + NI ++ + K+ +G + +
Sbjct: 150 NIMKQIL---SGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 338 DIXXXXXXXXXXXXETLERGLLTPKSNVWSFGIVLLELLTG 378
+ E L++ K +VWS G+++ LL G
Sbjct: 204 KLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCG 243
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ +G H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 126
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 127 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLE 374
E + + KS+VWSFG+++ E
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 128
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 129 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLE 374
E + + KS+VWSFG+++ E
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 128
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 129 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLE 374
E + + KS+VWSFG+++ E
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH +Y + N+ +DKD K++ +G C I + +
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 176
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH +Y + N+ +DKD K++ +G C I + +
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 233 LQHPNLCKLLGFHARDGSD-----QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
L+H N+ LGF A D D Q L+ + HGSL + + + +K+A
Sbjct: 93 LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLA 145
Query: 288 LCAAQGLTFLHEE-----GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
L A GL LH E G + + + NI + K+ + ++ G A
Sbjct: 146 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G +L + G+ + + +L I+DP + FP
Sbjct: 249 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 424 ARTVADIALRCLQKEPSERPTM 445
+ + D+ CL+++P +R ++
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISI 315
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH +Y + N+ +DKD K++ +G C I + +
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 291 AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXX 348
L +LH +Y + N+ +DKD K++ +G C I + +
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 349 XXXETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G +L + G+ + + +L I+DP + FP
Sbjct: 249 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 424 ARTVADIALRCLQKEPSERPTM 445
+ + D+ CL+++P +R ++
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISI 315
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 118
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 119 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLE 374
E + + KS+VWSFG+++ E
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH +Y + N+ +DKD K++ +G C I + +
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH +Y + N+ +DKD K++ +G C I + +
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 178
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 233 LQHPNLCKLLGFHARDGSD-----QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
L+H N+ LGF A D D Q L+ + HGSL + + + +K+A
Sbjct: 80 LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLA 132
Query: 288 LCAAQGLTFLHEE-----GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
L A GL LH E G + + + NI + K+ + ++ G A
Sbjct: 133 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G +L + G+ + + +L I+DP + FP
Sbjct: 202 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 246
Query: 424 ARTVADIALRCLQKEPSERPTM 445
+ + D+ CL+++P +R ++
Sbjct: 247 EKDLQDVLKCCLKRDPKQRISI 268
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 233 LQHPNLCKLLGFHARDGSD-----QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
L+H N+ LGF A D D Q L+ + HGSL + + + +K+A
Sbjct: 54 LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLA 106
Query: 288 LCAAQGLTFLHEE-----GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
L A GL LH E G + + + NI + K+ + ++ G A
Sbjct: 107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H G ++ + N+ +++D K+ +G A ++++
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQ-ADSEMXGXVVTRWYRAP 194
Query: 352 ETLERGL-LTPKSNVWSFGIVLLELLTGR 379
E + + T ++WS G ++ E++TG+
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ G A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 108
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 109 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLE 374
E + + KS+VWSFG+++ E
Sbjct: 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 112
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 113 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLE 374
E + + KS+VWSFG+++ E
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 233 LQHPNLCKLLGFHARDGSD-----QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
L+H N+ LGF A D D Q L+ + HGSL + + + +K+A
Sbjct: 55 LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLA 107
Query: 288 LCAAQGLTFLHEE-----GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
L A GL LH E G + + + NI + K+ + ++ G A
Sbjct: 108 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 233 LQHPNLCKLLGFHARDGSD-----QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
L+H N+ LGF A D D Q L+ + HGSL + + + +K+A
Sbjct: 60 LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLA 112
Query: 288 LCAAQGLTFLHEE-----GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
L A GL LH E G + + + NI + K+ + ++ G A
Sbjct: 113 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G +L + G+ + + +L I+DP + FP
Sbjct: 249 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 424 ARTVADIALRCLQKEPSERPTM 445
+ + D+ CL+++P +R ++
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISI 315
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPE-TDIXXXXXXXXXXX 350
L +LH +Y + N+ +DKD K++ +G C I + +
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 351 XETLERGLLTPKSNVWSFGIVLLELLTGR 379
E LE + W G+V+ E++ GR
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 112
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 113 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLE 374
E + + KS+VWSFG+++ E
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWN 281
E + + N + L +P + +++G ++ ML+ E G L++ Y + + D N
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNK--YLQQNRHVKDKN 106
Query: 282 TRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXX 341
+++ + G+ +L EE F ++ + + N+ + AK+S +G + + +
Sbjct: 107 I-IELVHQVSMGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 342 XXXX-----XXXXXXETLERGLLTPKSNVWSFGIVLLE 374
E + + KS+VWSFG+++ E
Sbjct: 163 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 233 LQHPNLCKLLGFHARDGSD-----QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
L+H N+ LGF A D D Q L+ + HGSL + + + +K+A
Sbjct: 57 LRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLA 109
Query: 288 LCAAQGLTFLHEE-----GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
L A GL LH E G + + + NI + K+ + ++ G A
Sbjct: 110 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G +L + G+ + + +L I+DP + FP
Sbjct: 221 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 265
Query: 424 ARTVADIALRCLQKEPSERPTM 445
+ + D+ CL+++P +R ++
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISI 287
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H G ++ + +N+ +++D ++ +G A E
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPE 190
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELL G+
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G +L + G+ + + +L I+DP + FP
Sbjct: 221 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 265
Query: 424 ARTVADIALRCLQKEPSERPTM 445
+ + D+ CL+++P +R ++
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISI 287
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRV 284
++ L +L+H ++C+L +H + +++ ++ E G L D +I S + TRV
Sbjct: 58 EIEALKNLRHQHICQL--YHVLETANKIFMVLEYCPGGELFDYII---SQDRLSEEETRV 112
Query: 285 KIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG-CAGHIPETD--IXX 341
+ + ++H +G + + N+ D+ KL +G CA D +
Sbjct: 113 VFRQIVS-AVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
Query: 342 XXXXXXXXXXETLE-RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF 400
E ++ + L +++VWS GI+L L+ G PF
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG------------------FLPF 210
Query: 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIAL--RCLQKEPSERPTMRSIF 449
DD + + ++G++ + + + I L + LQ +P +R +M+++
Sbjct: 211 --DDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G +L + G+ + + +L I+DP + FP
Sbjct: 205 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 249
Query: 424 ARTVADIALRCLQKEPSERPTM 445
+ + D+ CL+++P +R ++
Sbjct: 250 EKDLQDVLKCCLKRDPKQRISI 271
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 80/220 (36%), Gaps = 39/220 (17%)
Query: 235 HPNLCKLL-GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQG 293
HP + +LL F ++G ML+ ER D Y GP + +R A
Sbjct: 97 HPGVIRLLDWFETQEGF---MLVLERPLPAQ-DLFDYITEKGPLGEGPSRCFFGQVVA-A 151
Query: 294 LTFLHEEGPFQAMYNEFSTANIQID-KDFSAKLSGYGCAGHI---PETDIXXXXXXXXXX 349
+ H G ++ + NI ID + AKL +G + P TD
Sbjct: 152 IQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPE 208
Query: 350 XXETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409
+ L + VWS GI+L +++ G PF D
Sbjct: 209 WISRHQYHAL--PATVWSLGILLYDMVCG------------------DIPFERD----QE 244
Query: 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449
I++ +L FP + + RCL +PS RP++ I
Sbjct: 245 ILEAEL--HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKA 423
+VWS G +L + G+ + + +L I+DP + FP
Sbjct: 201 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 245
Query: 424 ARTVADIALRCLQKEPSERPTM 445
+ + D+ CL+++P +R ++
Sbjct: 246 EKDLQDVLKCCLKRDPKQRISI 267
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H ++ + +N+ +++D K+ + A H +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPE 192
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/165 (16%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 220 VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPID 279
+++ ++ L L HPN+ KL+ D +++E + G + + + P+
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----PLS 135
Query: 280 WNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD- 338
+ +G+ +LH + + ++ + +N+ + +D K++ +G + +D
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 339 -IXXXXXXXXXXXXETLE--RGLLTPKS-NVWSFGIVLLELLTGR 379
+ E+L R + + K+ +VW+ G+ L + G+
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 14/180 (7%)
Query: 220 VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPID 279
V+ ++ + L+HP L L + +D D M++ + L G L Y
Sbjct: 59 VRNVFKELQIMQGLEHPFLVNL-WYSFQDEEDMFMVV-DLLLGGDLR---YHLQQNVHFK 113
Query: 280 WNTRVKIALCA-AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP-ET 337
T VK+ +C L +L + + ++ + NI +D+ ++ + A +P ET
Sbjct: 114 EET-VKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169
Query: 338 DIXXXXXXXXXXXXETL--ERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394
I E +G + + WS G+ ELL GR+ R + +V
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H G ++ + +N+ +++D ++ +G A E
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELL G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 292 QGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIXXXXXXXXXXXX 351
+GL ++H G ++ + +N+ +++D ++ +G A E
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPE 198
Query: 352 ETLERGLLTPKSNVWSFGIVLLELLTGR 379
L ++WS G ++ ELL G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFIN-----DVNTLASLQHPN 237
+ EG + +Y+A D +T++ +L S+ K+ IN ++ L L HPN
Sbjct: 18 LGEGQFATVYKAR---DKNTNQIVAIKKIKLGHRSEA-KDGINRTALREIKLLQELSHPN 73
Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK-IALCAAQGLTF 296
+ LL G + + L+ +I D + + +K L QGL +
Sbjct: 74 IIGLLDAF---GHKSNISLVFDFMETDLEVII---KDNSLVLTPSHIKAYMLMTLQGLEY 127
Query: 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331
LH+ ++ + N+ +D++ KL+ +G A
Sbjct: 128 LHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 29/165 (17%)
Query: 233 LQHPNLCKLLGFHARD----GS-DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIA 287
++H N+ LGF A D GS Q LI + +GSL Y +D + +K+A
Sbjct: 88 MRHENI---LGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLA 140
Query: 288 LCAAQGLTFLHEE-----GPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI-------- 334
+ GL LH E G + + + NI + K+ + ++ G A
Sbjct: 141 YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD 200
Query: 335 --PETDIXXXXXXXXXXXXETLERGLLTP--KSNVWSFGIVLLEL 375
P T + E+L R ++++SFG++L E+
Sbjct: 201 IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 76/216 (35%), Gaps = 27/216 (12%)
Query: 208 ATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG----SDQRMLIYERLFH 262
A + ++ + +E ++N L H N+ G + DQ L+ E
Sbjct: 52 AAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGA 111
Query: 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322
GS+ LI + G + I +GL+ LH+ + ++ + N+ + ++
Sbjct: 112 GSVTDLI-KNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167
Query: 323 AKLSGYGCAGHIPETDIXXXX-------XXXXXXXXETLERGLLTPKSNVWSFGIVLLEL 375
KL +G + + T + KS++WS GI +E+
Sbjct: 168 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
Query: 376 LTGRKNLDSRHPKEERNLV-----------KWSRPF 400
G L HP L+ KWS+ F
Sbjct: 228 AEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKF 263
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 29/216 (13%)
Query: 173 ACHNFFS-DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLA 231
A +FF + + G +S++YR T K + V + + V+ ++ L
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCK---QKGTQKPYALKVLKKTVDKKIVR---TEIGVLL 103
Query: 232 SLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLI----YGRSDGPPIDWNTRVKI 286
L HPN+ KL + + L+ E + G L DR++ Y D VK
Sbjct: 104 RLSHPNIIKLKEIF--ETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-----DAVKQ 156
Query: 287 ALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---DFSAKLSGYGCAGHIPETDIXXXX 343
L + + +LHE G ++ + N+ D K++ +G + + +
Sbjct: 157 IL---EAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV 210
Query: 344 XXXXXXXXETLERGL-LTPKSNVWSFGIVLLELLTG 378
+ RG P+ ++WS GI+ LL G
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,321,944
Number of Sequences: 62578
Number of extensions: 398187
Number of successful extensions: 2076
Number of sequences better than 100.0: 614
Number of HSP's better than 100.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 424
Number of HSP's that attempted gapping in prelim test: 1391
Number of HSP's gapped (non-prelim): 698
length of query: 473
length of database: 14,973,337
effective HSP length: 102
effective length of query: 371
effective length of database: 8,590,381
effective search space: 3187031351
effective search space used: 3187031351
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)