Query 011995
Match_columns 473
No_of_seqs 364 out of 2741
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 07:30:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011995.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011995hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 2.9E-56 6.4E-61 444.0 26.3 289 161-458 61-355 (361)
2 KOG0581 Mitogen-activated prot 100.0 3.5E-53 7.6E-58 401.2 20.1 256 165-451 76-335 (364)
3 KOG0192 Tyrosine kinase specif 100.0 3.6E-49 7.7E-54 390.8 23.5 255 181-461 47-309 (362)
4 KOG0575 Polo-like serine/threo 100.0 1.3E-48 2.7E-53 390.2 20.4 248 175-451 18-269 (592)
5 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-47 3.1E-52 378.9 22.2 262 161-458 199-464 (468)
6 KOG0595 Serine/threonine-prote 100.0 1.3E-47 2.8E-52 366.3 19.7 249 174-448 9-265 (429)
7 KOG0615 Serine/threonine prote 100.0 3E-48 6.6E-53 370.2 14.4 253 174-451 171-437 (475)
8 KOG0600 Cdc2-related protein k 100.0 3.6E-47 7.8E-52 371.1 19.0 267 174-450 116-399 (560)
9 KOG0593 Predicted protein kina 100.0 8.4E-47 1.8E-51 347.2 17.3 264 175-450 2-283 (396)
10 KOG0591 NIMA (never in mitosis 100.0 8.3E-48 1.8E-52 350.5 10.0 259 176-454 20-284 (375)
11 KOG0598 Ribosomal protein S6 k 100.0 2.3E-46 5E-51 354.8 16.7 243 174-444 24-270 (357)
12 KOG0659 Cdk activating kinase 100.0 1.6E-45 3.4E-50 333.5 19.8 265 175-451 2-281 (318)
13 KOG0592 3-phosphoinositide-dep 100.0 2.3E-45 5E-50 361.2 21.1 252 171-451 69-338 (604)
14 KOG0198 MEKK and related serin 100.0 1.1E-45 2.4E-50 355.5 16.8 257 175-456 17-281 (313)
15 KOG0578 p21-activated serine/t 100.0 3.5E-44 7.6E-49 355.7 27.5 249 175-451 273-523 (550)
16 KOG0663 Protein kinase PITSLRE 100.0 3.9E-45 8.5E-50 340.3 17.1 267 176-451 77-361 (419)
17 KOG0661 MAPK related serine/th 100.0 8.6E-46 1.9E-50 359.1 12.8 266 173-451 8-291 (538)
18 KOG0193 Serine/threonine prote 100.0 3.6E-44 7.9E-49 356.7 23.9 263 161-457 385-655 (678)
19 KOG1026 Nerve growth factor re 100.0 3E-45 6.6E-50 379.0 14.8 261 179-461 490-768 (774)
20 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.3E-44 9.4E-49 357.3 22.1 265 174-458 6-337 (338)
21 KOG0201 Serine/threonine prote 100.0 3.5E-45 7.5E-50 352.2 11.2 248 176-451 14-263 (467)
22 KOG0582 Ste20-like serine/thre 100.0 7.8E-44 1.7E-48 343.0 20.2 261 174-451 25-293 (516)
23 KOG0583 Serine/threonine prote 100.0 1.7E-43 3.7E-48 353.2 22.1 249 172-449 14-273 (370)
24 KOG0597 Serine-threonine prote 100.0 1.6E-43 3.5E-48 348.4 15.4 246 175-450 2-250 (808)
25 cd06649 PKc_MEK2 Catalytic dom 100.0 1.7E-42 3.7E-47 345.0 22.8 267 174-452 4-302 (331)
26 KOG4721 Serine/threonine prote 100.0 1.8E-43 3.9E-48 348.0 15.3 251 160-454 116-367 (904)
27 KOG0588 Serine/threonine prote 100.0 3.2E-43 6.9E-48 352.7 17.4 249 175-452 12-264 (786)
28 PHA02988 hypothetical protein; 100.0 2.4E-42 5.3E-47 336.3 23.1 265 159-456 9-280 (283)
29 cd05096 PTKc_DDR1 Catalytic do 100.0 2.7E-42 5.8E-47 339.2 23.6 265 175-454 5-304 (304)
30 KOG0616 cAMP-dependent protein 100.0 3.1E-43 6.6E-48 323.1 15.5 238 175-442 44-283 (355)
31 KOG0694 Serine/threonine prote 100.0 2.5E-42 5.5E-47 348.8 23.7 243 173-445 366-613 (694)
32 KOG0580 Serine/threonine prote 100.0 3.1E-43 6.7E-48 314.3 13.3 251 174-451 21-273 (281)
33 KOG1095 Protein tyrosine kinas 100.0 7.1E-43 1.5E-47 373.5 18.6 259 176-456 693-962 (1025)
34 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.7E-42 1.7E-46 329.5 24.0 257 175-455 5-265 (266)
35 KOG0585 Ca2+/calmodulin-depend 100.0 8.1E-43 1.8E-47 338.0 16.7 256 172-453 94-374 (576)
36 PLN00034 mitogen-activated pro 100.0 8E-42 1.7E-46 343.2 24.5 246 177-451 76-328 (353)
37 KOG0605 NDR and related serine 100.0 1.8E-42 3.9E-47 341.1 18.3 245 173-444 139-435 (550)
38 KOG0194 Protein tyrosine kinas 100.0 1.2E-42 2.5E-47 349.1 16.8 262 176-460 158-425 (474)
39 cd05104 PTKc_Kit Catalytic dom 100.0 6.3E-42 1.4E-46 346.5 22.0 260 175-455 35-374 (375)
40 KOG0594 Protein kinase PCTAIRE 100.0 5.6E-42 1.2E-46 324.7 19.9 277 175-458 11-311 (323)
41 cd05106 PTKc_CSF-1R Catalytic 100.0 4.7E-42 1E-46 347.2 20.7 261 175-456 38-373 (374)
42 cd05612 STKc_PRKX_like Catalyt 100.0 4.9E-42 1.1E-46 335.4 19.6 247 175-451 1-254 (291)
43 cd05048 PTKc_Ror Catalytic Dom 100.0 3.5E-41 7.7E-46 327.4 24.5 259 175-455 5-283 (283)
44 cd06650 PKc_MEK1 Catalytic dom 100.0 1.5E-41 3.3E-46 338.4 22.2 267 174-451 4-299 (333)
45 KOG0660 Mitogen-activated prot 100.0 1.8E-42 3.9E-47 327.1 13.5 267 173-451 20-310 (359)
46 cd05054 PTKc_VEGFR Catalytic d 100.0 2.2E-41 4.7E-46 337.8 22.0 263 175-457 7-335 (337)
47 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-41 2.4E-46 338.0 19.7 241 181-450 1-250 (323)
48 PTZ00263 protein kinase A cata 100.0 1E-41 2.2E-46 339.1 19.4 248 174-451 17-271 (329)
49 cd05631 STKc_GRK4 Catalytic do 100.0 2E-41 4.4E-46 330.0 21.1 253 176-451 1-261 (285)
50 cd05108 PTKc_EGFR Catalytic do 100.0 5.1E-41 1.1E-45 332.1 23.9 260 175-459 7-272 (316)
51 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.9E-41 4.2E-46 330.7 20.6 265 175-450 5-284 (288)
52 cd07848 STKc_CDKL5 Catalytic d 100.0 3.4E-41 7.3E-46 328.4 21.9 265 175-450 1-283 (287)
53 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.7E-41 8E-46 342.8 22.7 263 174-457 36-399 (400)
54 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.8E-41 6.1E-46 336.4 20.8 254 175-451 1-257 (333)
55 cd05033 PTKc_EphR Catalytic do 100.0 1.3E-40 2.8E-45 320.6 24.4 257 175-455 4-265 (266)
56 KOG0611 Predicted serine/threo 100.0 4.3E-42 9.3E-47 326.5 13.2 250 173-452 51-304 (668)
57 KOG0658 Glycogen synthase kina 100.0 4.7E-42 1E-46 324.8 13.3 270 175-457 24-314 (364)
58 PTZ00426 cAMP-dependent protei 100.0 3.5E-41 7.7E-46 336.5 20.1 249 174-451 29-284 (340)
59 cd05052 PTKc_Abl Catalytic dom 100.0 2.3E-40 5E-45 318.4 24.8 253 175-455 6-262 (263)
60 PF07714 Pkinase_Tyr: Protein 100.0 3.1E-41 6.7E-46 324.2 18.6 250 180-452 4-259 (259)
61 KOG0589 Serine/threonine prote 100.0 1.4E-41 3E-46 335.3 16.4 252 174-451 3-258 (426)
62 PLN00113 leucine-rich repeat r 100.0 1.6E-40 3.4E-45 375.3 27.1 267 174-461 689-957 (968)
63 cd05111 PTK_HER3 Pseudokinase 100.0 2.5E-40 5.4E-45 321.3 24.8 259 175-458 7-271 (279)
64 cd05593 STKc_PKB_gamma Catalyt 100.0 6.6E-41 1.4E-45 333.1 21.1 242 181-451 1-251 (328)
65 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-40 3.7E-45 322.9 23.3 270 178-456 7-282 (283)
66 cd05062 PTKc_IGF-1R Catalytic 100.0 1.7E-40 3.7E-45 321.8 23.1 260 173-454 4-277 (277)
67 cd05049 PTKc_Trk Catalytic dom 100.0 1.6E-40 3.6E-45 322.0 23.0 258 175-454 5-280 (280)
68 cd05585 STKc_YPK1_like Catalyt 100.0 4.9E-41 1.1E-45 331.7 19.0 239 183-450 1-246 (312)
69 cd05094 PTKc_TrkC Catalytic do 100.0 3.3E-40 7.2E-45 322.3 24.6 263 175-459 5-286 (291)
70 cd05072 PTKc_Lyn Catalytic dom 100.0 2.4E-40 5.3E-45 317.7 23.3 252 175-455 6-261 (261)
71 cd05089 PTKc_Tie1 Catalytic do 100.0 3E-40 6.4E-45 323.7 24.3 262 175-459 2-279 (297)
72 cd05088 PTKc_Tie2 Catalytic do 100.0 2.4E-40 5.2E-45 325.4 23.7 263 174-461 6-286 (303)
73 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.4E-40 5.2E-45 316.9 22.6 249 175-453 4-256 (256)
74 cd05068 PTKc_Frk_like Catalyti 100.0 3.4E-40 7.3E-45 316.8 23.7 253 174-455 5-261 (261)
75 cd05584 STKc_p70S6K Catalytic 100.0 1.2E-40 2.7E-45 330.4 21.3 245 181-451 2-256 (323)
76 cd05595 STKc_PKB_beta Catalyti 100.0 6.7E-41 1.5E-45 332.4 19.2 242 181-451 1-251 (323)
77 cd05090 PTKc_Ror1 Catalytic do 100.0 3.6E-40 7.7E-45 320.6 23.7 258 175-454 5-282 (283)
78 KOG0599 Phosphorylase kinase g 100.0 1.2E-41 2.6E-46 308.9 12.0 257 170-451 12-283 (411)
79 cd05093 PTKc_TrkB Catalytic do 100.0 4.8E-40 1E-44 320.7 24.2 263 174-458 4-282 (288)
80 cd05045 PTKc_RET Catalytic dom 100.0 6.1E-40 1.3E-44 320.2 24.9 261 176-458 1-289 (290)
81 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.4E-40 5.2E-45 325.2 22.1 266 174-450 4-287 (303)
82 cd05053 PTKc_FGFR Catalytic do 100.0 3.2E-40 6.9E-45 322.4 22.5 261 174-456 11-292 (293)
83 cd05594 STKc_PKB_alpha Catalyt 100.0 9.3E-41 2E-45 331.6 18.9 242 181-451 1-252 (325)
84 cd07862 STKc_CDK6 Catalytic do 100.0 4.4E-40 9.6E-45 320.9 23.3 269 175-450 1-286 (290)
85 cd05035 PTKc_Axl_like Catalyti 100.0 8.3E-40 1.8E-44 315.6 24.6 259 177-455 1-272 (273)
86 KOG1094 Discoidin domain recep 100.0 2.7E-40 5.9E-45 326.7 21.2 260 177-456 540-805 (807)
87 cd05614 STKc_MSK2_N N-terminal 100.0 1.8E-40 3.8E-45 330.5 20.1 254 176-451 1-267 (332)
88 KOG1989 ARK protein kinase fam 100.0 1.3E-40 2.8E-45 346.2 19.8 262 173-460 35-316 (738)
89 KOG0033 Ca2+/calmodulin-depend 100.0 2.7E-42 5.8E-47 308.8 6.2 253 174-451 10-267 (355)
90 PTZ00284 protein kinase; Provi 100.0 6.9E-40 1.5E-44 341.1 25.1 270 167-450 121-437 (467)
91 cd05109 PTKc_HER2 Catalytic do 100.0 1.2E-39 2.5E-44 316.3 25.1 259 175-458 7-271 (279)
92 PTZ00267 NIMA-related protein 100.0 3.3E-40 7.2E-45 344.0 22.7 250 176-450 68-322 (478)
93 cd05063 PTKc_EphR_A2 Catalytic 100.0 8.1E-40 1.8E-44 315.3 23.7 258 174-455 4-267 (268)
94 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.8E-40 8.3E-45 335.2 22.3 261 175-456 37-400 (401)
95 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.4E-40 1.8E-44 317.1 23.6 259 174-454 5-277 (277)
96 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.1E-40 1.1E-44 328.8 22.7 263 175-457 7-341 (343)
97 cd05032 PTKc_InsR_like Catalyt 100.0 5.9E-40 1.3E-44 317.6 22.4 259 174-454 5-277 (277)
98 cd05599 STKc_NDR_like Catalyti 100.0 1.5E-40 3.3E-45 335.2 19.0 250 175-451 1-296 (364)
99 cd05055 PTKc_PDGFR Catalytic d 100.0 7.6E-40 1.6E-44 321.7 23.2 260 174-455 34-301 (302)
100 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.7E-40 1.7E-44 322.3 23.2 262 175-458 18-302 (307)
101 cd05626 STKc_LATS2 Catalytic d 100.0 3.3E-40 7.1E-45 334.9 21.2 250 176-451 2-305 (381)
102 cd05058 PTKc_Met_Ron Catalytic 100.0 1.2E-39 2.7E-44 312.8 24.0 254 181-457 1-261 (262)
103 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-39 2.8E-44 316.1 24.3 264 174-458 5-279 (280)
104 cd05084 PTKc_Fes Catalytic dom 100.0 8.1E-40 1.8E-44 312.4 22.5 247 181-454 1-252 (252)
105 cd05148 PTKc_Srm_Brk Catalytic 100.0 8.1E-40 1.8E-44 313.9 22.5 255 173-455 4-261 (261)
106 KOG4278 Protein tyrosine kinas 100.0 5.7E-41 1.2E-45 332.8 14.8 260 175-462 267-530 (1157)
107 cd08228 STKc_Nek6 Catalytic do 100.0 7.5E-40 1.6E-44 315.2 22.3 260 175-456 2-266 (267)
108 cd05628 STKc_NDR1 Catalytic do 100.0 3.9E-40 8.4E-45 332.2 21.2 251 175-451 1-293 (363)
109 cd05589 STKc_PKN Catalytic dom 100.0 3.8E-40 8.1E-45 327.1 20.8 245 177-451 1-257 (324)
110 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.4E-40 3.1E-45 333.4 17.8 250 175-451 1-285 (350)
111 cd05091 PTKc_Ror2 Catalytic do 100.0 8.4E-40 1.8E-44 317.8 22.6 257 176-454 6-282 (283)
112 cd05066 PTKc_EphR_A Catalytic 100.0 1.4E-39 3E-44 313.7 23.9 257 175-455 4-266 (267)
113 cd05095 PTKc_DDR2 Catalytic do 100.0 1.6E-39 3.5E-44 318.2 24.7 265 175-454 5-296 (296)
114 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.9E-40 1.1E-44 327.7 21.5 266 176-451 1-290 (338)
115 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.3E-39 2.8E-44 320.2 24.1 263 174-458 14-299 (304)
116 cd05629 STKc_NDR_like_fungal C 100.0 2.4E-40 5.2E-45 335.4 19.4 250 175-451 1-305 (377)
117 cd05097 PTKc_DDR_like Catalyti 100.0 9.8E-40 2.1E-44 319.6 23.0 265 175-454 5-295 (295)
118 cd05051 PTKc_DDR Catalytic dom 100.0 1.5E-39 3.2E-44 318.1 24.2 265 175-454 5-296 (296)
119 KOG0610 Putative serine/threon 100.0 2.9E-40 6.3E-45 316.0 18.6 249 176-449 78-390 (459)
120 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-39 2.7E-44 312.1 23.1 247 176-452 5-255 (256)
121 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 8E-40 1.7E-44 318.2 22.1 274 175-455 4-283 (284)
122 cd06615 PKc_MEK Catalytic doma 100.0 1.3E-39 2.8E-44 321.0 23.8 266 175-452 1-288 (308)
123 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-39 2.4E-44 312.6 22.7 249 175-453 4-256 (256)
124 cd05060 PTKc_Syk_like Catalyti 100.0 1.7E-39 3.8E-44 311.1 23.7 250 181-456 1-256 (257)
125 cd05075 PTKc_Axl Catalytic dom 100.0 2.2E-39 4.7E-44 312.8 24.5 257 178-455 2-271 (272)
126 cd05605 STKc_GRK4_like Catalyt 100.0 6.9E-40 1.5E-44 319.2 21.2 253 176-451 1-261 (285)
127 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.2E-39 4.9E-44 310.9 24.2 250 175-454 6-259 (260)
128 cd05619 STKc_nPKC_theta Cataly 100.0 6.2E-40 1.3E-44 324.4 20.8 241 181-450 1-247 (316)
129 cd05116 PTKc_Syk Catalytic dom 100.0 2.1E-39 4.5E-44 310.7 23.8 247 182-455 2-255 (257)
130 cd05590 STKc_nPKC_eta Catalyti 100.0 4.7E-40 1E-44 325.9 19.8 236 181-445 1-241 (320)
131 cd05582 STKc_RSK_N N-terminal 100.0 2.3E-40 5.1E-45 327.7 17.6 241 181-447 2-245 (318)
132 cd05071 PTKc_Src Catalytic dom 100.0 2.6E-39 5.7E-44 311.1 24.3 252 175-456 6-261 (262)
133 cd05115 PTKc_Zap-70 Catalytic 100.0 3.3E-39 7.2E-44 309.6 24.7 248 182-455 2-255 (257)
134 cd05587 STKc_cPKC Catalytic do 100.0 4.8E-40 1E-44 326.4 19.5 246 176-450 1-256 (324)
135 cd05592 STKc_nPKC_theta_delta 100.0 6.9E-40 1.5E-44 324.1 20.5 241 181-450 1-247 (316)
136 cd05065 PTKc_EphR_B Catalytic 100.0 2.3E-39 4.9E-44 312.5 23.5 257 175-455 4-268 (269)
137 cd05591 STKc_nPKC_epsilon Cata 100.0 7E-40 1.5E-44 324.8 20.4 242 181-451 1-254 (321)
138 cd05616 STKc_cPKC_beta Catalyt 100.0 6.6E-40 1.4E-44 325.2 20.2 246 176-450 1-256 (323)
139 cd05092 PTKc_TrkA Catalytic do 100.0 2.3E-39 4.9E-44 314.7 23.4 257 175-454 5-280 (280)
140 PTZ00036 glycogen synthase kin 100.0 5.1E-40 1.1E-44 339.0 19.9 266 174-451 65-351 (440)
141 cd05047 PTKc_Tie Catalytic dom 100.0 4E-39 8.7E-44 311.1 24.9 251 181-456 1-269 (270)
142 cd05050 PTKc_Musk Catalytic do 100.0 2.5E-39 5.4E-44 315.4 23.7 259 174-454 4-288 (288)
143 KOG0983 Mitogen-activated prot 100.0 5.1E-41 1.1E-45 305.0 10.7 255 165-451 89-349 (391)
144 cd05620 STKc_nPKC_delta Cataly 100.0 7.7E-40 1.7E-44 323.8 20.0 240 181-449 1-246 (316)
145 cd05069 PTKc_Yes Catalytic dom 100.0 4.8E-39 1E-43 308.7 24.8 250 175-454 6-259 (260)
146 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.4E-39 9.4E-44 318.0 25.1 263 175-459 12-297 (314)
147 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.8E-39 3.9E-44 315.9 22.0 273 176-455 5-283 (284)
148 KOG4717 Serine/threonine prote 100.0 3.9E-40 8.5E-45 321.1 17.1 248 176-451 19-270 (864)
149 KOG0196 Tyrosine kinase, EPH ( 100.0 2.7E-41 5.9E-46 343.5 9.3 277 162-464 607-900 (996)
150 cd05056 PTKc_FAK Catalytic dom 100.0 2.7E-39 5.8E-44 312.1 22.8 259 175-458 6-268 (270)
151 cd05625 STKc_LATS1 Catalytic d 100.0 8.6E-40 1.9E-44 331.9 20.2 248 176-450 2-304 (382)
152 cd05570 STKc_PKC Catalytic dom 100.0 1.1E-39 2.3E-44 323.1 20.2 242 181-451 1-252 (318)
153 cd05082 PTKc_Csk Catalytic dom 100.0 5.4E-39 1.2E-43 307.6 24.5 250 175-455 6-256 (256)
154 cd05596 STKc_ROCK Catalytic do 100.0 8.9E-40 1.9E-44 330.2 20.0 253 173-451 41-304 (370)
155 cd05598 STKc_LATS Catalytic do 100.0 4.4E-40 9.6E-45 333.3 17.8 250 175-451 1-301 (376)
156 cd05621 STKc_ROCK2 Catalytic d 100.0 7.1E-40 1.5E-44 330.8 19.0 252 174-451 42-304 (370)
157 cd06619 PKc_MKK5 Catalytic dom 100.0 1.5E-39 3.3E-44 315.6 20.5 252 175-451 1-253 (279)
158 KOG2345 Serine/threonine prote 100.0 3.2E-40 6.8E-45 296.3 14.2 264 174-456 20-301 (302)
159 cd08229 STKc_Nek7 Catalytic do 100.0 3.3E-39 7.1E-44 310.7 22.5 260 175-456 2-266 (267)
160 cd05040 PTKc_Ack_like Catalyti 100.0 5.5E-39 1.2E-43 307.4 23.8 250 181-453 1-256 (257)
161 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.2E-39 1.1E-43 308.4 23.6 252 174-455 5-260 (260)
162 cd00192 PTKc Catalytic domain 100.0 7.3E-39 1.6E-43 306.3 24.5 251 181-453 1-262 (262)
163 KOG0574 STE20-like serine/thre 100.0 9.2E-42 2E-46 313.3 4.1 247 177-451 35-283 (502)
164 PTZ00283 serine/threonine prot 100.0 1.4E-39 3E-44 340.0 21.0 260 169-451 26-297 (496)
165 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 8.9E-39 1.9E-43 308.4 25.1 254 181-453 1-268 (269)
166 KOG0032 Ca2+/calmodulin-depend 100.0 2.2E-39 4.7E-44 323.6 21.4 252 174-451 34-293 (382)
167 PHA03212 serine/threonine kina 100.0 9.6E-40 2.1E-44 331.9 19.1 258 174-450 91-375 (391)
168 cd05608 STKc_GRK1 Catalytic do 100.0 2.7E-39 5.8E-44 314.3 21.3 246 183-451 1-257 (280)
169 cd05601 STKc_CRIK Catalytic do 100.0 4.3E-40 9.4E-45 327.4 16.1 252 175-451 1-263 (330)
170 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.5E-39 5.5E-44 314.8 20.9 260 175-456 5-271 (284)
171 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.9E-39 4.1E-44 319.8 20.2 265 175-450 6-285 (309)
172 cd06625 STKc_MEKK3_like Cataly 100.0 3E-39 6.6E-44 310.1 21.0 250 175-451 2-260 (263)
173 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.8E-39 1E-43 313.0 22.6 255 175-451 1-262 (286)
174 cd05588 STKc_aPKC Catalytic do 100.0 2.2E-39 4.8E-44 322.3 20.7 248 181-450 1-261 (329)
175 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.5E-39 1.6E-43 319.1 24.5 263 175-459 12-297 (334)
176 cd08219 STKc_Nek3 Catalytic do 100.0 5.4E-39 1.2E-43 307.2 22.0 250 176-451 1-252 (255)
177 cd05042 PTKc_Aatyk Catalytic d 100.0 9.3E-39 2E-43 308.2 23.8 254 181-453 1-268 (269)
178 cd05061 PTKc_InsR Catalytic do 100.0 7.4E-39 1.6E-43 312.3 23.3 261 174-456 5-279 (288)
179 cd08529 STKc_FA2-like Catalyti 100.0 9.1E-39 2E-43 305.4 23.5 250 176-451 1-253 (256)
180 cd05057 PTKc_EGFR_like Catalyt 100.0 1.2E-38 2.6E-43 309.2 24.6 259 175-458 7-271 (279)
181 cd05039 PTKc_Csk_like Catalyti 100.0 9.7E-39 2.1E-43 305.6 23.6 251 174-455 5-256 (256)
182 cd05618 STKc_aPKC_iota Catalyt 100.0 3E-39 6.6E-44 321.3 20.9 249 181-451 1-262 (329)
183 cd05034 PTKc_Src_like Catalyti 100.0 1.1E-38 2.4E-43 306.0 23.9 252 174-454 5-260 (261)
184 cd05602 STKc_SGK1 Catalytic do 100.0 2.2E-39 4.7E-44 321.8 19.4 241 181-450 1-246 (325)
185 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.5E-38 3.3E-43 305.7 24.6 259 175-456 2-266 (267)
186 cd05607 STKc_GRK7 Catalytic do 100.0 3.9E-39 8.6E-44 312.6 20.7 249 183-453 1-252 (277)
187 cd05575 STKc_SGK Catalytic dom 100.0 1.8E-39 3.9E-44 322.1 18.6 237 181-446 1-242 (323)
188 KOG0584 Serine/threonine prote 100.0 1.1E-40 2.3E-45 334.0 9.8 249 181-451 46-296 (632)
189 KOG0577 Serine/threonine prote 100.0 1.8E-40 4E-45 327.9 11.2 248 177-453 28-280 (948)
190 cd05615 STKc_cPKC_alpha Cataly 100.0 4.2E-39 9.1E-44 319.5 20.9 241 176-445 1-246 (323)
191 cd06637 STKc_TNIK Catalytic do 100.0 4.7E-39 1E-43 310.5 20.3 253 173-450 4-268 (272)
192 PHA03211 serine/threonine kina 100.0 2E-38 4.3E-43 326.9 26.2 259 175-451 169-455 (461)
193 KOG0667 Dual-specificity tyros 100.0 2.7E-39 5.9E-44 326.6 19.2 264 175-451 186-502 (586)
194 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.1E-39 1.1E-43 311.4 20.2 244 182-453 2-274 (274)
195 PTZ00266 NIMA-related protein 100.0 3.2E-39 6.9E-44 349.0 20.8 264 172-455 10-301 (1021)
196 cd05632 STKc_GRK5 Catalytic do 100.0 1.3E-38 2.8E-43 310.3 23.0 252 177-451 2-261 (285)
197 cd05604 STKc_SGK3 Catalytic do 100.0 2.2E-39 4.8E-44 321.8 17.7 240 181-449 1-245 (325)
198 cd05110 PTKc_HER4 Catalytic do 100.0 1.2E-38 2.7E-43 313.2 22.8 259 175-458 7-271 (303)
199 cd05046 PTK_CCK4 Pseudokinase 100.0 1E-38 2.3E-43 308.7 21.9 259 175-454 5-275 (275)
200 cd05622 STKc_ROCK1 Catalytic d 100.0 4.9E-39 1.1E-43 324.9 20.3 259 168-452 36-305 (371)
201 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.3E-39 1.6E-43 310.8 20.8 271 176-455 5-283 (284)
202 cd05085 PTKc_Fer Catalytic dom 100.0 2.7E-38 5.9E-43 301.3 24.3 245 181-453 1-249 (250)
203 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-38 2.4E-43 310.6 22.1 267 176-450 1-284 (288)
204 cd07876 STKc_JNK2 Catalytic do 100.0 9.8E-39 2.1E-43 321.5 22.3 267 173-451 19-315 (359)
205 cd06646 STKc_MAP4K5 Catalytic 100.0 8.4E-39 1.8E-43 308.0 20.9 254 174-452 8-266 (267)
206 cd07853 STKc_NLK Catalytic dom 100.0 8E-39 1.7E-43 323.7 21.7 266 176-451 1-288 (372)
207 cd07874 STKc_JNK3 Catalytic do 100.0 8E-39 1.7E-43 321.6 21.5 268 172-451 14-311 (355)
208 cd05044 PTKc_c-ros Catalytic d 100.0 1.2E-38 2.6E-43 307.2 21.9 252 181-454 1-269 (269)
209 cd05627 STKc_NDR2 Catalytic do 100.0 2.6E-39 5.7E-44 325.8 18.0 250 175-451 1-293 (360)
210 KOG0199 ACK and related non-re 100.0 5.2E-39 1.1E-43 323.0 19.5 262 162-456 104-373 (1039)
211 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.2E-38 2.6E-43 312.8 21.7 265 175-450 6-285 (301)
212 KOG0579 Ste20-like serine/thre 100.0 3.1E-40 6.8E-45 328.1 10.4 250 176-451 33-289 (1187)
213 cd06651 STKc_MEKK3 Catalytic d 100.0 1.9E-38 4.2E-43 305.6 22.6 250 175-450 2-260 (266)
214 cd05603 STKc_SGK2 Catalytic do 100.0 4.8E-39 1E-43 318.8 18.7 237 181-446 1-242 (321)
215 PHA03209 serine/threonine kina 100.0 1.5E-38 3.3E-43 319.8 22.6 261 173-451 64-351 (357)
216 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.2E-39 9.1E-44 320.0 18.3 243 181-445 1-248 (327)
217 cd05630 STKc_GRK6 Catalytic do 100.0 8.7E-39 1.9E-43 311.5 20.2 251 177-450 2-260 (285)
218 cd06654 STKc_PAK1 Catalytic do 100.0 1.6E-38 3.6E-43 311.3 22.2 249 175-451 20-270 (296)
219 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.1E-38 4.5E-43 303.4 22.3 244 181-453 1-259 (259)
220 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2E-38 4.3E-43 305.2 22.3 245 181-453 1-262 (262)
221 cd05073 PTKc_Hck Catalytic dom 100.0 4.1E-38 9E-43 302.2 24.4 251 175-455 6-260 (260)
222 cd07868 STKc_CDK8 Catalytic do 100.0 1.8E-38 3.8E-43 313.9 22.3 198 180-385 6-219 (317)
223 cd07861 STKc_CDK1_euk Catalyti 100.0 1.3E-38 2.9E-43 309.4 20.9 265 176-450 1-281 (285)
224 cd06609 STKc_MST3_like Catalyt 100.0 2.4E-38 5.3E-43 306.1 22.2 248 175-451 1-251 (274)
225 KOG4257 Focal adhesion tyrosin 100.0 1.6E-39 3.4E-44 323.1 13.8 254 179-458 393-652 (974)
226 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.8E-38 8.3E-43 307.1 23.4 261 175-451 1-266 (287)
227 PRK13184 pknD serine/threonine 100.0 1.6E-38 3.4E-43 342.3 22.7 261 175-458 2-293 (932)
228 cd07875 STKc_JNK1 Catalytic do 100.0 3.1E-38 6.6E-43 318.5 23.0 267 173-451 22-318 (364)
229 cd06652 STKc_MEKK2 Catalytic d 100.0 3.8E-38 8.2E-43 303.3 22.6 250 175-450 2-260 (265)
230 cd06638 STKc_myosinIIIA Cataly 100.0 1.7E-38 3.8E-43 308.9 20.3 265 165-452 8-284 (286)
231 cd05112 PTKc_Itk Catalytic dom 100.0 3.9E-38 8.4E-43 301.3 22.1 249 175-453 4-256 (256)
232 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.3E-38 5E-43 306.9 20.7 246 177-451 6-253 (277)
233 cd06655 STKc_PAK2 Catalytic do 100.0 3.6E-38 7.8E-43 308.9 22.0 248 175-450 19-268 (296)
234 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.3E-37 2.8E-42 300.4 25.4 253 182-453 2-267 (268)
235 cd06640 STKc_MST4 Catalytic do 100.0 6.8E-38 1.5E-42 303.7 23.5 247 176-451 5-253 (277)
236 cd06612 STKc_MST1_2 Catalytic 100.0 5E-38 1.1E-42 300.2 22.3 248 175-450 3-252 (256)
237 cd05597 STKc_DMPK_like Catalyt 100.0 3E-38 6.5E-43 314.5 21.4 254 175-451 1-266 (331)
238 cd06639 STKc_myosinIIIB Cataly 100.0 4E-38 8.6E-43 307.4 21.9 264 165-451 12-287 (291)
239 cd05041 PTKc_Fes_like Catalyti 100.0 7.3E-38 1.6E-42 298.6 23.1 245 181-453 1-250 (251)
240 cd08217 STKc_Nek2 Catalytic do 100.0 5.5E-38 1.2E-42 300.9 22.4 253 176-451 1-262 (265)
241 cd06624 STKc_ASK Catalytic dom 100.0 4.7E-38 1E-42 303.1 21.8 257 169-451 2-265 (268)
242 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.6E-38 7.8E-43 315.3 21.6 268 172-451 12-298 (343)
243 cd06643 STKc_SLK Catalytic dom 100.0 5.8E-38 1.3E-42 304.9 22.4 249 177-451 7-262 (282)
244 cd06613 STKc_MAP4K3_like Catal 100.0 7E-38 1.5E-42 300.3 22.6 252 175-450 3-259 (262)
245 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.1E-37 2.4E-42 301.0 24.1 259 177-455 1-272 (273)
246 KOG4279 Serine/threonine prote 100.0 4.6E-39 1E-43 322.8 14.7 243 181-451 581-832 (1226)
247 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.6E-38 3.5E-43 304.8 17.8 245 181-453 1-258 (258)
248 cd08223 STKc_Nek4 Catalytic do 100.0 8.5E-38 1.8E-42 299.0 22.6 251 176-451 1-254 (257)
249 cd08221 STKc_Nek9 Catalytic do 100.0 9.1E-38 2E-42 298.8 22.7 251 176-452 1-254 (256)
250 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.8E-38 1E-42 305.4 20.9 261 165-450 6-278 (282)
251 cd06631 STKc_YSK4 Catalytic do 100.0 4.7E-38 1E-42 302.4 20.6 248 176-450 1-261 (265)
252 PF00069 Pkinase: Protein kina 100.0 1.9E-38 4.1E-43 303.7 17.6 252 177-450 1-256 (260)
253 cd06611 STKc_SLK_like Catalyti 100.0 4.8E-38 1E-42 305.0 20.6 251 175-451 5-262 (280)
254 cd05083 PTKc_Chk Catalytic dom 100.0 6.5E-38 1.4E-42 299.7 21.1 247 175-454 6-253 (254)
255 PHA03207 serine/threonine kina 100.0 4E-38 8.6E-43 320.7 20.8 262 174-451 91-375 (392)
256 cd05623 STKc_MRCK_alpha Cataly 100.0 2.5E-38 5.4E-43 315.2 18.7 254 175-451 1-266 (332)
257 cd06645 STKc_MAP4K3 Catalytic 100.0 4.6E-38 1E-42 302.9 20.0 251 175-450 9-264 (267)
258 cd05624 STKc_MRCK_beta Catalyt 100.0 2.1E-38 4.6E-43 315.5 18.2 254 175-451 1-266 (331)
259 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-38 2.9E-43 316.8 16.7 240 183-450 1-252 (330)
260 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.4E-37 3.1E-42 299.3 23.2 247 176-450 1-263 (267)
261 cd08227 PK_STRAD_alpha Pseudok 100.0 9.3E-38 2E-42 310.3 22.6 263 180-451 3-307 (327)
262 cd06605 PKc_MAPKK Catalytic do 100.0 4.2E-38 9.1E-43 302.5 19.4 253 175-451 1-257 (265)
263 cd07867 STKc_CDC2L6 Catalytic 100.0 9.5E-38 2.1E-42 308.4 22.1 262 181-450 7-313 (317)
264 cd06656 STKc_PAK3 Catalytic do 100.0 8.8E-38 1.9E-42 306.3 21.3 248 175-450 19-268 (297)
265 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-37 3.2E-42 302.1 22.7 265 175-450 1-282 (286)
266 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.4E-37 3.1E-42 298.8 22.3 255 175-450 1-263 (267)
267 KOG0596 Dual specificity; seri 100.0 7.3E-39 1.6E-43 315.4 13.4 250 175-451 361-627 (677)
268 smart00219 TyrKc Tyrosine kina 100.0 2.2E-37 4.9E-42 295.7 23.4 253 177-452 1-258 (258)
269 cd06644 STKc_STK10_LOK Catalyt 100.0 1.1E-37 2.5E-42 304.4 21.7 250 175-450 12-268 (292)
270 KOG0986 G protein-coupled rece 100.0 4.6E-39 1E-43 310.0 11.5 249 175-446 185-436 (591)
271 cd07833 STKc_CDKL Catalytic do 100.0 7.7E-38 1.7E-42 304.4 20.3 265 175-450 1-284 (288)
272 PHA03210 serine/threonine kina 100.0 5.5E-38 1.2E-42 328.7 20.5 274 172-451 145-454 (501)
273 cd06658 STKc_PAK5 Catalytic do 100.0 8.6E-38 1.9E-42 305.6 20.0 244 180-451 27-272 (292)
274 cd05580 STKc_PKA Catalytic dom 100.0 1.6E-37 3.4E-42 303.2 21.7 246 175-450 1-253 (290)
275 cd06608 STKc_myosinIII_like Ca 100.0 1.6E-37 3.4E-42 299.6 21.4 255 173-450 4-271 (275)
276 cd05574 STKc_phototropin_like 100.0 1.7E-37 3.7E-42 306.7 22.1 251 175-450 1-288 (316)
277 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.6E-37 3.5E-42 301.6 21.5 251 175-450 1-260 (283)
278 cd06632 STKc_MEKK1_plant Catal 100.0 2.6E-37 5.5E-42 295.5 22.5 248 176-450 1-254 (258)
279 cd07836 STKc_Pho85 Catalytic d 100.0 2.1E-37 4.5E-42 300.9 22.0 263 176-450 1-280 (284)
280 cd06659 STKc_PAK6 Catalytic do 100.0 1.3E-37 2.9E-42 305.0 20.7 245 179-451 25-271 (297)
281 cd06641 STKc_MST3 Catalytic do 100.0 3E-37 6.6E-42 299.1 22.8 246 177-451 6-253 (277)
282 cd08220 STKc_Nek8 Catalytic do 100.0 2.9E-37 6.2E-42 295.0 22.3 250 176-451 1-253 (256)
283 cd06630 STKc_MEKK1 Catalytic d 100.0 2.4E-37 5.2E-42 297.8 21.7 251 176-450 1-263 (268)
284 cd05609 STKc_MAST Catalytic do 100.0 1.8E-37 3.9E-42 305.2 20.8 254 175-454 1-273 (305)
285 KOG0666 Cyclin C-dependent kin 100.0 8.9E-39 1.9E-43 295.1 10.7 280 169-453 18-339 (438)
286 cd08218 STKc_Nek1 Catalytic do 100.0 3.5E-37 7.6E-42 294.7 22.1 250 176-451 1-253 (256)
287 cd08528 STKc_Nek10 Catalytic d 100.0 2.4E-37 5.3E-42 298.2 21.2 255 176-453 1-268 (269)
288 cd07843 STKc_CDC2L1 Catalytic 100.0 2.8E-37 6.1E-42 301.7 21.6 267 175-450 5-289 (293)
289 cd07839 STKc_CDK5 Catalytic do 100.0 1.4E-37 3.1E-42 302.2 19.4 264 176-450 1-280 (284)
290 cd06626 STKc_MEKK4 Catalytic d 100.0 3.8E-37 8.3E-42 295.5 22.0 250 176-450 1-260 (264)
291 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.3E-37 2.8E-42 302.6 18.8 265 175-450 1-282 (286)
292 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.8E-37 1E-41 295.5 22.4 250 175-450 2-260 (264)
293 cd07832 STKc_CCRK Catalytic do 100.0 2.9E-37 6.4E-42 300.0 21.0 265 176-451 1-282 (286)
294 cd07844 STKc_PCTAIRE_like Cata 100.0 3.3E-37 7.1E-42 300.8 21.4 265 175-450 5-287 (291)
295 cd06623 PKc_MAPKK_plant_like C 100.0 4.1E-37 9E-42 295.1 21.7 252 175-451 1-256 (264)
296 cd06917 STKc_NAK1_like Catalyt 100.0 4.3E-37 9.3E-42 297.7 22.0 248 176-451 2-255 (277)
297 KOG4645 MAPKKK (MAP kinase kin 100.0 1.7E-39 3.6E-44 346.0 5.2 254 171-451 1231-1494(1509)
298 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.3E-37 1.1E-41 296.3 21.9 253 176-451 2-269 (272)
299 PHA02882 putative serine/threo 100.0 3.9E-37 8.5E-42 301.3 21.1 259 175-453 12-294 (294)
300 KOG0604 MAP kinase-activated p 100.0 9.1E-38 2E-42 287.2 15.3 252 173-451 59-322 (400)
301 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.2E-37 9.2E-42 300.2 21.0 267 173-450 3-287 (291)
302 cd07860 STKc_CDK2_3 Catalytic 100.0 2.3E-37 5E-42 300.7 19.0 264 176-450 1-280 (284)
303 cd07831 STKc_MOK Catalytic dom 100.0 8.1E-37 1.8E-41 296.3 22.8 265 177-451 1-279 (282)
304 cd07841 STKc_CDK7 Catalytic do 100.0 7.9E-37 1.7E-41 299.2 22.7 265 176-451 1-282 (298)
305 cd06648 STKc_PAK_II Catalytic 100.0 1.1E-36 2.3E-41 296.8 22.6 246 177-450 21-268 (285)
306 cd05578 STKc_Yank1 Catalytic d 100.0 3.7E-37 7.9E-42 295.1 18.9 248 176-449 1-253 (258)
307 cd06614 STKc_PAK Catalytic dom 100.0 1.3E-36 2.8E-41 296.0 23.0 252 172-450 16-269 (286)
308 cd07845 STKc_CDK10 Catalytic d 100.0 9.5E-37 2.1E-41 300.5 22.1 269 174-451 6-290 (309)
309 cd06616 PKc_MKK4 Catalytic dom 100.0 3.9E-37 8.6E-42 299.8 19.1 255 176-451 5-267 (288)
310 cd05122 PKc_STE Catalytic doma 100.0 1.7E-36 3.8E-41 287.8 22.9 249 176-450 1-250 (253)
311 cd06647 STKc_PAK_I Catalytic d 100.0 5.9E-37 1.3E-41 299.9 20.2 249 175-451 19-269 (293)
312 cd05633 STKc_GRK3 Catalytic do 100.0 8.7E-37 1.9E-41 296.5 20.8 244 182-451 1-255 (279)
313 cd06607 STKc_TAO Catalytic dom 100.0 1.7E-36 3.7E-41 298.5 22.1 248 175-451 15-267 (307)
314 cd07837 STKc_CdkB_plant Cataly 100.0 2E-36 4.3E-41 295.8 22.0 267 175-450 1-290 (295)
315 cd08225 STKc_Nek5 Catalytic do 100.0 1.6E-36 3.5E-41 289.9 21.0 250 176-451 1-254 (257)
316 KOG0690 Serine/threonine prote 100.0 6.2E-38 1.3E-42 290.9 10.6 240 175-443 168-411 (516)
317 cd07849 STKc_ERK1_2_like Catal 100.0 8.1E-37 1.8E-41 304.7 19.5 271 174-456 4-299 (336)
318 KOG0662 Cyclin-dependent kinas 100.0 2E-37 4.3E-42 265.7 12.7 265 176-451 3-283 (292)
319 cd05572 STKc_cGK_PKG Catalytic 100.0 1.6E-36 3.4E-41 291.4 20.6 243 183-450 1-251 (262)
320 cd07850 STKc_JNK Catalytic dom 100.0 2.8E-36 6.1E-41 302.9 23.3 267 173-451 14-311 (353)
321 KOG0586 Serine/threonine prote 100.0 2.7E-37 5.9E-42 309.2 15.3 252 172-452 53-307 (596)
322 cd07835 STKc_CDK1_like Catalyt 100.0 1.4E-36 3E-41 295.1 19.9 263 177-450 1-279 (283)
323 KOG3653 Transforming growth fa 100.0 3.3E-37 7.2E-42 299.2 15.2 266 181-461 216-509 (534)
324 cd08226 PK_STRAD_beta Pseudoki 100.0 4.4E-36 9.6E-41 298.4 22.7 262 181-451 4-308 (328)
325 cd08530 STKc_CNK2-like Catalyt 100.0 3.7E-36 8E-41 287.1 21.1 251 176-451 1-253 (256)
326 cd07865 STKc_CDK9 Catalytic do 100.0 4.2E-36 9.1E-41 295.3 22.0 268 174-450 11-306 (310)
327 cd05577 STKc_GRK Catalytic dom 100.0 3.2E-36 7E-41 291.9 20.9 245 183-450 1-253 (277)
328 cd06606 STKc_MAPKKK Catalytic 100.0 6E-36 1.3E-40 285.3 22.4 251 176-450 1-256 (260)
329 cd07840 STKc_CDK9_like Catalyt 100.0 2.5E-36 5.5E-41 293.2 20.1 265 177-450 1-283 (287)
330 cd07852 STKc_MAPK15 Catalytic 100.0 2.7E-36 5.9E-41 301.0 20.5 267 173-451 5-295 (337)
331 PLN00009 cyclin-dependent kina 100.0 5.3E-36 1.1E-40 292.9 21.9 266 175-450 2-283 (294)
332 cd06635 STKc_TAO1 Catalytic do 100.0 6.7E-36 1.5E-40 295.7 22.6 251 177-456 27-282 (317)
333 cd05606 STKc_beta_ARK Catalyti 100.0 7.5E-36 1.6E-40 289.7 21.8 244 182-451 1-255 (278)
334 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.3E-36 1.1E-40 299.0 21.1 272 174-456 4-298 (337)
335 cd05118 STKc_CMGC Catalytic do 100.0 8.7E-36 1.9E-40 289.0 21.8 262 177-450 1-279 (283)
336 cd06657 STKc_PAK4 Catalytic do 100.0 7.5E-36 1.6E-40 292.0 21.5 242 181-450 26-269 (292)
337 cd07842 STKc_CDK8_like Catalyt 100.0 4.8E-36 1E-40 295.9 19.7 270 176-450 1-312 (316)
338 cd07855 STKc_ERK5 Catalytic do 100.0 5.1E-36 1.1E-40 298.7 19.9 268 174-451 4-294 (334)
339 cd05579 STKc_MAST_like Catalyt 100.0 5.2E-36 1.1E-40 287.2 19.2 242 183-453 1-256 (265)
340 cd07864 STKc_CDK12 Catalytic d 100.0 1.3E-35 2.9E-40 290.9 22.4 269 172-450 4-298 (302)
341 KOG4250 TANK binding protein k 100.0 2.1E-36 4.5E-41 306.7 17.0 276 176-458 14-313 (732)
342 KOG1025 Epidermal growth facto 100.0 1.1E-36 2.3E-41 311.1 14.9 254 180-458 701-960 (1177)
343 cd07834 STKc_MAPK Catalytic do 100.0 4.1E-36 9E-41 298.6 18.9 272 176-457 1-297 (330)
344 cd08215 STKc_Nek Catalytic dom 100.0 1.9E-35 4E-40 282.0 22.6 251 176-451 1-255 (258)
345 cd07866 STKc_BUR1 Catalytic do 100.0 9.2E-36 2E-40 293.0 20.8 267 174-450 7-307 (311)
346 cd08216 PK_STRAD Pseudokinase 100.0 3.3E-35 7.1E-40 290.0 24.5 260 181-451 8-295 (314)
347 cd08222 STKc_Nek11 Catalytic d 100.0 2E-35 4.2E-40 283.4 22.1 253 176-451 1-257 (260)
348 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-35 2.6E-40 297.0 21.2 278 166-456 2-304 (342)
349 cd05583 STKc_MSK_N N-terminal 100.0 9.7E-36 2.1E-40 290.1 20.0 257 176-455 1-267 (288)
350 cd06618 PKc_MKK7 Catalytic dom 100.0 1.5E-35 3.3E-40 290.1 21.4 254 174-452 14-274 (296)
351 cd07830 STKc_MAK_like Catalyti 100.0 1.7E-35 3.6E-40 287.4 21.5 264 177-450 1-279 (283)
352 cd06634 STKc_TAO2 Catalytic do 100.0 1.9E-35 4.2E-40 291.2 22.0 251 177-456 17-272 (308)
353 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.7E-35 3.6E-40 296.4 21.9 275 164-451 6-300 (345)
354 cd05581 STKc_PDK1 Catalytic do 100.0 8.5E-36 1.8E-40 288.5 19.0 247 175-450 1-276 (280)
355 cd06633 STKc_TAO3 Catalytic do 100.0 2.4E-35 5.3E-40 291.2 22.6 246 177-451 23-273 (313)
356 cd06627 STKc_Cdc7_like Catalyt 100.0 2.9E-35 6.4E-40 280.4 22.2 247 176-450 1-250 (254)
357 cd05613 STKc_MSK1_N N-terminal 100.0 1.8E-35 3.9E-40 288.6 21.1 253 176-451 1-268 (290)
358 cd05611 STKc_Rim15_like Cataly 100.0 1.4E-35 3.1E-40 284.3 19.9 246 181-453 2-250 (260)
359 cd07838 STKc_CDK4_6_like Catal 100.0 4.6E-35 1E-39 284.6 23.6 265 177-450 1-283 (287)
360 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-35 2.5E-40 297.2 19.0 264 175-450 5-299 (342)
361 PHA03390 pk1 serine/threonine- 100.0 2.7E-35 5.9E-40 284.2 20.9 252 166-450 5-261 (267)
362 KOG1006 Mitogen-activated prot 100.0 1.9E-37 4E-42 280.8 4.9 263 160-450 56-326 (361)
363 PTZ00024 cyclin-dependent prot 100.0 2E-35 4.3E-40 294.5 20.0 264 175-450 8-312 (335)
364 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.5E-35 5.4E-40 293.1 20.4 269 170-451 5-288 (328)
365 KOG0587 Traf2- and Nck-interac 100.0 1.1E-35 2.3E-40 307.0 17.6 258 169-450 13-281 (953)
366 KOG0200 Fibroblast/platelet-de 100.0 3.3E-35 7.1E-40 312.9 21.7 261 175-456 296-580 (609)
367 KOG1024 Receptor-like protein 100.0 2.1E-35 4.5E-40 280.1 17.5 270 168-458 277-558 (563)
368 cd07829 STKc_CDK_like Catalyti 100.0 7E-35 1.5E-39 282.5 21.7 262 177-450 1-278 (282)
369 KOG1035 eIF-2alpha kinase GCN2 100.0 8.3E-36 1.8E-40 316.5 16.1 254 171-450 475-870 (1351)
370 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.8E-35 1E-39 292.8 20.5 266 172-450 12-297 (343)
371 KOG0669 Cyclin T-dependent kin 100.0 6.7E-37 1.5E-41 275.2 6.2 267 176-451 18-315 (376)
372 KOG0607 MAP kinase-interacting 100.0 1.9E-35 4E-40 274.0 15.7 265 165-450 73-360 (463)
373 cd07851 STKc_p38 Catalytic dom 100.0 3.9E-35 8.5E-40 293.4 18.4 267 172-450 12-297 (343)
374 cd07857 STKc_MPK1 Catalytic do 100.0 9.3E-35 2E-39 289.4 19.6 267 176-451 1-292 (332)
375 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-34 3.7E-39 274.8 20.6 236 183-447 1-240 (250)
376 KOG2052 Activin A type IB rece 100.0 9.6E-35 2.1E-39 280.1 17.7 259 174-457 210-505 (513)
377 cd05610 STKc_MASTL Catalytic d 100.0 2.3E-34 5E-39 310.6 21.6 148 174-332 3-152 (669)
378 KOG4236 Serine/threonine prote 100.0 1.2E-35 2.5E-40 290.6 9.9 245 180-450 569-818 (888)
379 KOG0603 Ribosomal protein S6 k 100.0 3.1E-35 6.7E-40 295.9 13.1 241 174-451 321-563 (612)
380 KOG0612 Rho-associated, coiled 100.0 2.2E-35 4.7E-40 311.1 10.7 254 169-450 69-337 (1317)
381 KOG1151 Tousled-like protein k 100.0 3.2E-35 7E-40 282.4 10.0 256 175-450 463-740 (775)
382 KOG0696 Serine/threonine prote 100.0 1.1E-34 2.3E-39 276.7 12.2 241 175-444 349-594 (683)
383 KOG0671 LAMMER dual specificit 100.0 1.6E-34 3.4E-39 274.2 12.5 267 172-451 86-406 (415)
384 cd05576 STKc_RPK118_like Catal 100.0 6.4E-34 1.4E-38 269.6 16.2 220 186-445 4-223 (237)
385 KOG0614 cGMP-dependent protein 100.0 2.3E-34 5E-39 280.7 7.6 243 175-444 420-665 (732)
386 PLN03225 Serine/threonine-prot 100.0 1.4E-32 3E-37 290.1 19.7 264 173-451 130-450 (566)
387 smart00220 S_TKc Serine/Threon 100.0 7E-32 1.5E-36 254.2 20.9 238 187-450 1-240 (244)
388 KOG0664 Nemo-like MAPK-related 100.0 2.4E-34 5.2E-39 261.4 3.6 268 176-453 54-345 (449)
389 KOG0668 Casein kinase II, alph 100.0 3.9E-33 8.4E-38 247.8 11.0 262 174-451 37-322 (338)
390 PLN03224 probable serine/threo 100.0 7.1E-32 1.5E-36 278.4 21.1 264 173-451 143-500 (507)
391 KOG0984 Mitogen-activated prot 100.0 3.8E-33 8.2E-38 244.4 9.2 200 180-387 51-257 (282)
392 KOG1290 Serine/threonine prote 100.0 3.9E-31 8.6E-36 257.5 20.7 268 174-451 77-550 (590)
393 KOG0608 Warts/lats-like serine 100.0 1.8E-32 3.9E-37 273.3 11.4 240 177-443 631-917 (1034)
394 KOG1027 Serine/threonine prote 100.0 4.5E-32 9.8E-37 279.0 10.5 242 177-450 511-766 (903)
395 KOG0695 Serine/threonine prote 100.0 1.3E-31 2.8E-36 249.8 10.5 250 174-444 249-503 (593)
396 KOG0670 U4/U6-associated splic 100.0 1.7E-31 3.6E-36 261.4 9.7 267 174-451 431-746 (752)
397 KOG0576 Mitogen-activated prot 100.0 1.5E-31 3.3E-36 268.7 8.0 251 175-450 15-270 (829)
398 cd00180 PKc Catalytic domain o 100.0 6.2E-29 1.3E-33 228.2 20.5 211 183-452 1-215 (215)
399 KOG1152 Signal transduction se 100.0 1.3E-30 2.7E-35 258.2 9.5 199 174-383 560-770 (772)
400 KOG0665 Jun-N-terminal kinase 100.0 3.3E-30 7.1E-35 239.7 10.5 264 175-451 17-310 (369)
401 smart00221 STYKc Protein kinas 100.0 9.4E-28 2E-32 224.0 19.5 198 177-384 1-202 (225)
402 KOG1167 Serine/threonine prote 100.0 5.6E-28 1.2E-32 232.7 12.7 268 170-451 31-381 (418)
403 KOG1345 Serine/threonine kinas 99.9 7.8E-28 1.7E-32 219.0 10.3 255 173-453 22-286 (378)
404 PLN00181 protein SPA1-RELATED; 99.9 5.1E-28 1.1E-32 267.2 10.9 195 232-451 28-265 (793)
405 smart00750 KIND kinase non-cat 99.9 8.4E-27 1.8E-31 210.3 14.6 170 263-458 1-172 (176)
406 KOG1164 Casein kinase (serine/ 99.9 2.7E-24 5.8E-29 213.0 22.5 261 176-459 19-301 (322)
407 KOG0195 Integrin-linked kinase 99.9 1.1E-25 2.3E-30 205.1 7.0 249 181-456 196-447 (448)
408 KOG1165 Casein kinase (serine/ 99.9 1.8E-24 4E-29 202.3 14.9 261 175-459 28-303 (449)
409 PRK09188 serine/threonine prot 99.9 4.1E-24 8.9E-29 212.1 14.1 178 169-366 12-210 (365)
410 KOG1163 Casein kinase (serine/ 99.9 5.5E-24 1.2E-28 191.0 12.0 260 173-456 13-285 (341)
411 COG0515 SPS1 Serine/threonine 99.9 2.3E-22 4.9E-27 196.5 23.7 255 177-451 2-275 (384)
412 KOG0590 Checkpoint kinase and 99.9 3.2E-24 6.9E-29 226.2 6.2 255 179-451 322-585 (601)
413 KOG0603 Ribosomal protein S6 k 99.9 2.3E-22 5E-27 203.3 4.3 229 183-445 2-232 (612)
414 KOG1240 Protein kinase contain 99.9 4.6E-22 1E-26 210.4 6.8 245 176-453 24-293 (1431)
415 PRK12274 serine/threonine prot 99.8 1.3E-20 2.8E-25 171.0 14.1 182 179-386 6-211 (218)
416 PF14531 Kinase-like: Kinase-l 99.8 6.1E-21 1.3E-25 181.9 11.8 237 176-442 13-288 (288)
417 PRK10359 lipopolysaccharide co 99.8 5.7E-21 1.2E-25 176.9 10.3 174 173-376 29-216 (232)
418 KOG4158 BRPK/PTEN-induced prot 99.8 7.4E-21 1.6E-25 182.0 10.1 196 234-453 274-512 (598)
419 cd05147 RIO1_euk RIO kinase fa 99.8 2.7E-20 5.9E-25 169.8 12.8 140 180-334 2-167 (190)
420 KOG1033 eIF-2alpha kinase PEK/ 99.8 8.9E-22 1.9E-26 195.5 2.8 170 252-447 330-508 (516)
421 KOG1023 Natriuretic peptide re 99.8 6.9E-20 1.5E-24 185.3 13.5 217 230-460 1-229 (484)
422 cd05145 RIO1_like RIO kinase f 99.8 3.1E-19 6.8E-24 163.2 14.7 142 180-336 2-169 (190)
423 PRK10345 hypothetical protein; 99.8 1.1E-18 2.4E-23 161.0 13.9 138 178-331 5-156 (210)
424 KOG1166 Mitotic checkpoint ser 99.8 7.4E-19 1.6E-23 189.5 14.8 253 169-461 692-959 (974)
425 PRK14879 serine/threonine prot 99.8 4.1E-18 8.8E-23 158.3 14.0 135 181-333 2-143 (211)
426 PRK09605 bifunctional UGMP fam 99.8 3.5E-18 7.6E-23 180.6 12.2 147 171-334 329-477 (535)
427 KOG0606 Microtubule-associated 99.7 2.2E-18 4.8E-23 182.7 8.7 137 291-445 153-306 (1205)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 3.1E-17 6.8E-22 150.9 11.2 131 182-333 1-138 (199)
429 smart00090 RIO RIO-like kinase 99.7 7E-17 1.5E-21 152.4 13.2 145 176-335 29-199 (237)
430 cd05144 RIO2_C RIO kinase fami 99.7 2E-16 4.4E-21 145.6 12.8 148 167-336 7-177 (198)
431 PRK01723 3-deoxy-D-manno-octul 99.6 3.5E-15 7.5E-20 141.1 13.7 143 181-334 37-192 (239)
432 cd05120 APH_ChoK_like Aminogly 99.6 8.2E-15 1.8E-19 127.5 13.1 134 180-333 3-138 (155)
433 KOG0590 Checkpoint kinase and 99.6 1.8E-16 3.8E-21 167.7 0.1 252 177-451 22-286 (601)
434 cd05119 RIO RIO kinase family, 99.6 9.7E-15 2.1E-19 132.9 9.9 138 180-335 2-165 (187)
435 KOG0601 Cyclin-dependent kinas 99.5 3.7E-13 8E-18 136.8 12.9 248 176-450 115-378 (524)
436 KOG1266 Protein kinase [Signal 99.5 6.9E-14 1.5E-18 131.7 6.5 204 227-452 118-332 (458)
437 TIGR01982 UbiB 2-polyprenylphe 99.4 4.6E-12 1E-16 130.1 13.4 143 180-335 122-308 (437)
438 cd05151 ChoK Choline Kinase (C 99.3 9.3E-12 2E-16 111.2 10.6 130 181-333 4-136 (170)
439 KOG0601 Cyclin-dependent kinas 99.3 1.9E-12 4E-17 131.7 6.3 252 173-456 263-519 (524)
440 KOG1243 Protein kinase [Genera 99.3 1.1E-10 2.3E-15 120.2 16.9 147 218-378 51-199 (690)
441 KOG0606 Microtubule-associated 99.2 2.9E-12 6.2E-17 136.9 2.9 245 175-446 804-1084(1205)
442 PRK04750 ubiB putative ubiquin 99.2 3.2E-11 6.9E-16 125.6 8.6 148 174-336 119-316 (537)
443 KOG3087 Serine/threonine prote 99.2 2.7E-10 5.8E-15 99.9 10.8 149 179-333 11-165 (229)
444 COG4248 Uncharacterized protei 99.2 2E-09 4.3E-14 105.2 17.8 264 180-460 16-305 (637)
445 COG3642 Mn2+-dependent serine/ 99.1 2.9E-10 6.3E-15 100.1 10.6 137 181-333 2-140 (204)
446 cd05154 ACAD10_11_like Acyl-Co 99.1 6.6E-10 1.4E-14 103.5 13.4 145 181-333 4-206 (223)
447 cd05146 RIO3_euk RIO kinase fa 99.1 1.2E-09 2.7E-14 99.2 13.9 141 180-334 2-174 (197)
448 KOG3741 Poly(A) ribonuclease s 98.9 6.8E-08 1.5E-12 97.0 17.8 218 188-452 289-522 (655)
449 PF06293 Kdo: Lipopolysacchari 98.8 8.2E-08 1.8E-12 88.8 14.1 141 188-334 17-171 (206)
450 PRK15123 lipopolysaccharide co 98.8 1E-07 2.3E-12 91.3 14.6 108 222-333 74-194 (268)
451 PRK09902 hypothetical protein; 98.8 1.6E-07 3.4E-12 85.8 13.6 154 174-332 17-178 (216)
452 KOG2137 Protein kinase [Signal 98.7 3.3E-09 7.2E-14 109.8 2.3 145 289-449 107-263 (700)
453 COG0478 RIO-like serine/threon 98.6 2.5E-07 5.4E-12 86.5 9.5 135 177-332 93-250 (304)
454 PF01163 RIO1: RIO1 family; I 98.5 2.4E-07 5.3E-12 83.9 7.6 98 222-334 54-156 (188)
455 KOG0576 Mitogen-activated prot 98.3 1.4E-07 3.1E-12 96.9 1.2 181 181-383 248-431 (829)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 1.1E-05 2.4E-10 75.6 13.1 138 181-332 7-181 (226)
457 PF12260 PIP49_C: Protein-kina 98.3 4.7E-06 1E-10 75.7 9.3 104 224-333 7-111 (188)
458 PF06176 WaaY: Lipopolysacchar 98.2 1.4E-05 3E-10 73.4 10.1 68 251-333 116-183 (229)
459 cd05150 APH Aminoglycoside 3'- 98.1 3.3E-05 7.3E-10 73.2 12.9 140 182-332 5-192 (244)
460 PF01636 APH: Phosphotransfera 98.1 5.2E-05 1.1E-09 70.8 12.6 144 181-332 3-196 (239)
461 PLN02876 acyl-CoA dehydrogenas 98.0 9.2E-05 2E-09 82.6 15.1 153 180-333 43-257 (822)
462 COG1718 RIO1 Serine/threonine 98.0 0.00012 2.6E-09 68.1 13.1 153 165-335 35-217 (268)
463 COG2112 Predicted Ser/Thr prot 98.0 4.7E-05 1E-09 67.0 9.8 129 180-334 27-156 (201)
464 COG0661 AarF Predicted unusual 98.0 4.1E-05 9E-10 79.7 10.8 79 251-336 239-317 (517)
465 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.0002 4.2E-09 65.5 13.7 135 179-332 5-171 (199)
466 cd05155 APH_ChoK_like_1 Unchar 97.9 0.00012 2.6E-09 69.1 12.2 32 302-333 163-194 (235)
467 KOG1035 eIF-2alpha kinase GCN2 97.9 3.3E-05 7.2E-10 85.0 8.0 198 223-453 229-436 (1351)
468 KOG1235 Predicted unusual prot 97.9 0.00012 2.6E-09 76.2 11.7 141 181-336 167-357 (538)
469 PF13095 FTA2: Kinetochore Sim 97.9 0.00034 7.4E-09 63.6 13.1 128 175-331 37-206 (207)
470 PRK10593 hypothetical protein; 97.7 0.00054 1.2E-08 67.1 13.1 78 180-265 19-100 (297)
471 cd05157 ETNK_euk Ethanolamine 97.6 0.00065 1.4E-08 63.9 12.1 30 303-332 170-200 (235)
472 cd05153 HomoserineK_II Homoser 97.5 0.0016 3.6E-08 63.5 12.7 155 169-332 3-204 (296)
473 TIGR02721 ycfN_thiK thiamine k 97.4 0.00098 2.1E-08 63.7 10.5 137 183-333 4-175 (256)
474 TIGR00938 thrB_alt homoserine 97.3 0.008 1.7E-07 59.1 15.4 160 165-332 7-216 (307)
475 KOG1826 Ras GTPase activating 97.3 3.7E-05 8.1E-10 86.4 -1.8 160 223-382 1276-1440(2724)
476 cd05156 ChoK_euk Choline Kinas 97.2 0.0033 7.1E-08 61.6 11.6 31 302-332 178-212 (302)
477 PRK05231 homoserine kinase; Pr 97.1 0.018 3.9E-07 56.8 15.1 30 303-332 187-216 (319)
478 PRK09550 mtnK methylthioribose 97.0 0.0092 2E-07 60.5 12.3 77 181-264 32-117 (401)
479 cd05152 MPH2' Macrolide 2'-Pho 96.8 0.024 5.3E-07 54.8 13.0 31 303-333 185-216 (276)
480 PLN02236 choline kinase 96.7 0.023 4.9E-07 56.9 12.4 144 181-332 42-230 (344)
481 COG3173 Predicted aminoglycosi 96.6 0.029 6.3E-07 55.0 12.1 32 303-334 198-229 (321)
482 KOG1093 Predicted protein kina 96.6 0.0025 5.5E-08 65.0 4.5 166 220-448 26-191 (725)
483 TIGR01767 MTRK 5-methylthiorib 96.3 0.027 5.8E-07 56.1 10.1 78 182-263 2-85 (370)
484 KOG2268 Serine/threonine prote 96.1 0.01 2.3E-07 57.5 5.9 131 177-329 94-247 (465)
485 PF03881 Fructosamin_kin: Fruc 96.1 0.044 9.6E-07 53.2 10.4 73 180-263 22-97 (288)
486 COG5072 ALK1 Serine/threonine 96.1 0.02 4.4E-07 56.3 7.7 73 251-334 299-371 (488)
487 KOG2270 Serine/threonine prote 95.8 0.15 3.2E-06 50.6 12.2 144 178-332 147-312 (520)
488 PLN02421 phosphotransferase, a 95.8 0.12 2.6E-06 51.4 11.9 30 303-332 182-212 (330)
489 PF01633 Choline_kinase: Choli 95.6 0.025 5.4E-07 52.3 5.8 29 304-332 144-173 (211)
490 COG2334 Putative homoserine ki 95.4 0.49 1.1E-05 46.9 14.7 159 165-332 11-227 (331)
491 PLN02756 S-methyl-5-thioribose 95.4 0.29 6.4E-06 49.7 13.0 77 181-262 38-119 (418)
492 PTZ00384 choline kinase; Provi 95.1 0.25 5.4E-06 50.1 11.9 78 181-266 56-137 (383)
493 PRK11768 serine/threonine prot 94.8 1.3 2.8E-05 43.9 15.8 29 303-333 196-224 (325)
494 PRK12396 5-methylribose kinase 94.7 0.1 2.2E-06 52.7 7.6 78 181-262 35-117 (409)
495 PF07387 Seadorna_VP7: Seadorn 94.5 0.2 4.4E-06 46.2 8.3 125 220-380 102-226 (308)
496 KOG1236 Predicted unusual prot 93.4 0.34 7.5E-06 48.7 8.2 62 251-318 318-379 (565)
497 COG3001 Uncharacterized protei 93.2 1.6 3.5E-05 40.7 11.7 46 219-266 51-99 (286)
498 PRK06148 hypothetical protein; 92.9 1.5 3.2E-05 50.4 13.6 30 304-333 204-236 (1013)
499 PTZ00296 choline kinase; Provi 92.7 1.5 3.2E-05 45.5 12.0 29 303-332 284-312 (442)
500 PLN03150 hypothetical protein; 92.2 0.072 1.6E-06 57.7 1.8 40 35-78 470-509 (623)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-56 Score=444.03 Aligned_cols=289 Identities=43% Similarity=0.732 Sum_probs=250.7
Q ss_pred CCcCCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChh-hHhHHHHHHHHHhCCCCCcc
Q 011995 161 TLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG-VKEFINDVNTLASLQHPNLC 239 (473)
Q Consensus 161 ~~~~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Ei~~l~~l~HpnIv 239 (473)
..+.|+++||..+|++|...+.||+|+||.||+|.+.++. . ++|+++...... ..+|.+|+++|.+++|||+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~----~--vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv 134 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGT----V--VAVKRLSSNSGQGEREFLNEVEILSRLRHPNLV 134 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCC----E--EEEEEecCCCCcchhHHHHHHHHHhcCCCcCcc
Confidence 5677999999999999999999999999999999998862 2 444555543332 66799999999999999999
Q ss_pred cceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 240 ~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
+|+|||.+.+. +.+||||||++|+|.++|+..... .++|..|++||.++|+||+|||...+++|||||||++|||||+
T Consensus 135 ~LlGyC~e~~~-~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 135 KLLGYCLEGGE-HRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred cEEEEEecCCc-eEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC
Confidence 99999997631 699999999999999999875433 8999999999999999999999999888999999999999999
Q ss_pred CCcEEEeccCCCcccCC-CCc-cCc-ccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh
Q 011995 320 DFSAKLSGYGCAGHIPE-TDI-SNS-SVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~-~~~-~~~-~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~ 396 (473)
++++||+|||+|+..+. ... ... .||.+|++||++..+..+.++|||||||+|+||+||+.+.+...+.....++.|
T Consensus 213 ~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w 292 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEW 292 (361)
T ss_pred CCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHH
Confidence 99999999999977654 322 222 789999999999999999999999999999999999999987655555568899
Q ss_pred cccccccccccccccccccC-CCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 397 SRPFLADDCRLSLIMDPQLK-GRFPL-KAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~-~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
..+.+.++ .+..++|+.+. +.++. .....+..++.+|++.+|.+||+|.||++.|+.+...
T Consensus 293 ~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 293 AKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 88877776 88999999987 66664 6778899999999999999999999999999776644
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-53 Score=401.23 Aligned_cols=256 Identities=24% Similarity=0.380 Sum_probs=220.2
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceee
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGF 244 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~ 244 (473)
+++.||+.. +.||+|..|+||++. +..+.+.+|.|++.+.......+++.+|+++++.++||+||.+||.
T Consensus 76 i~~~dle~~-------~~lG~G~gG~V~kv~---Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~yga 145 (364)
T KOG0581|consen 76 ISLSDLERL-------GVLGSGNGGTVYKVR---HKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGA 145 (364)
T ss_pred cCHHHhhhh-------hhcccCCCcEEEEEE---EcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEE
Confidence 677788776 999999999999999 4556788999999888888889999999999999999999999999
Q ss_pred eecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCCceeeCCCCcE
Q 011995 245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTANIQIDKDFSA 323 (473)
Q Consensus 245 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~NILl~~~~~v 323 (473)
|+.++. .++|+||||++|||++++.. .+.+++....+|+.+|++||.|||+ ++ ||||||||+|||++..|+|
T Consensus 146 F~~~~~-~isI~mEYMDgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeV 218 (364)
T KOG0581|consen 146 FYSNGE-EISICMEYMDGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEV 218 (364)
T ss_pred EEeCCc-eEEeehhhcCCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCE
Confidence 998743 69999999999999999843 3579999999999999999999996 66 9999999999999999999
Q ss_pred EEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCCh--HHHHhHhhhccccc
Q 011995 324 KLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHP--KEERNLVKWSRPFL 401 (473)
Q Consensus 324 kl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~ 401 (473)
||||||.++.+.+....+++||..|||||.+.++.|+.++||||||++++||.+|+.||..... .....+..
T Consensus 219 KicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~------ 292 (364)
T KOG0581|consen 219 KICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC------ 292 (364)
T ss_pred EeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH------
Confidence 9999999998877777889999999999999999999999999999999999999999987411 11111111
Q ss_pred ccccccccccccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ADDCRLSLIMDPQLKGRFPLK-AARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.+.. ...+|.. ++.++++|+..||++||.+||++.|++++
T Consensus 293 -------~Iv~~p-pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 293 -------AIVDEP-PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred -------HHhcCC-CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 122211 1123443 88999999999999999999999999874
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-49 Score=390.75 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=211.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC---CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
..||+|+||+||+|.+++... ++++.+.. .....+.|.+|+.+|.+++|||||+++|+|.... ..++|||
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~------vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~-~~~~iVt 119 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDV------VAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP-GSLCIVT 119 (362)
T ss_pred hhcccCCceeEEEEEeCCcee------EEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-CceEEEE
Confidence 669999999999999987652 33333332 2222678999999999999999999999998752 2699999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-cEEEeccCCCcccCC
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF-SAKLSGYGCAGHIPE 336 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-~vkl~DFGla~~~~~ 336 (473)
|||++|+|.++++.. ....+++..++.|+.|||+||.|||++++ |||||||++|||++.++ ++||+|||+++....
T Consensus 120 Ey~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred EeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 999999999999764 35679999999999999999999999984 99999999999999997 999999999987755
Q ss_pred --CCccCcccccccCChhhhh--cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 337 --TDISNSSVAAANLSVETLE--RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 337 --~~~~~~~~t~~y~aPE~~~--~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
...+...||..|||||++. ...|+.++|||||||++|||+||+.||.+....+.... +..
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~----------------v~~ 260 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASA----------------VVV 260 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHH----------------HHh
Confidence 3444578999999999999 56899999999999999999999999998775322111 112
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
...+..++..+...+..++.+||..||.+||++.+|+..|+.+......
T Consensus 261 ~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 261 GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 2233344556788999999999999999999999999999988776554
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-48 Score=390.16 Aligned_cols=248 Identities=21% Similarity=0.380 Sum_probs=216.3
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..|..+++||+|||+.||+++ +..++..+|+|++... .+....+.+.+||+|.+.|+|||||++++||++. ++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~---~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs--~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEAR---DLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS--NN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEE---EcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC--Cc
Confidence 468999999999999999998 4445566677776543 3556678899999999999999999999999876 89
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|||+|+|..++|..++. ....+++.++..++.||+.||.|||+++ |||||||..|+||+++.+|||+|||||.
T Consensus 93 VYivLELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt 166 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLAT 166 (592)
T ss_pred eEEEEEecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceee
Confidence 999999999999999985 3457999999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.+... .-.+.+|||.|+|||++.....+..+||||+|||+|-||.|++||....-.+....|.-..
T Consensus 167 ~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~------------ 234 (592)
T KOG0575|consen 167 QLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE------------ 234 (592)
T ss_pred eecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC------------
Confidence 88643 4467799999999999999889999999999999999999999999877666655553221
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..+|..++.++.+||.++|+.||.+|||+.+||..
T Consensus 235 ------Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 235 ------YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ------cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 12366788999999999999999999999999864
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-47 Score=378.89 Aligned_cols=262 Identities=23% Similarity=0.411 Sum_probs=220.3
Q ss_pred CCcCCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCccc
Q 011995 161 TLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240 (473)
Q Consensus 161 ~~~~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~ 240 (473)
....+..+++... +.||+|-||.||.|.+..... ++++.+.......+.|.+|+++|.+|+|+|||+
T Consensus 199 d~wei~r~~l~l~-------~~LG~G~FG~V~~g~~~~~~~------vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~ 265 (468)
T KOG0197|consen 199 DPWEIPREELKLI-------RELGSGQFGEVWLGKWNGSTK------VAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVK 265 (468)
T ss_pred CCeeecHHHHHHH-------HHhcCCccceEEEEEEcCCCc------ccceEEeccccChhHHHHHHHHHHhCcccCeEE
Confidence 3445666777665 899999999999999987643 333333333455688999999999999999999
Q ss_pred ceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 241 l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
++|+|..+ +.+|||||||+.|+|.++|.. ..+..+.....+.++.|||+|++||++++ +|||||.+.||||+++
T Consensus 266 l~gV~~~~--~piyIVtE~m~~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~ 339 (468)
T KOG0197|consen 266 LYGVCTKQ--EPIYIVTEYMPKGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDED 339 (468)
T ss_pred EEEEEecC--CceEEEEEecccCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccC
Confidence 99999876 579999999999999999975 34677999999999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCCCCccCccc---ccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhh
Q 011995 321 FSAKLSGYGCAGHIPETDISNSSV---AAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~~~~~~~~---t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~ 396 (473)
..+||+|||+|+....+.+....+ ...|.|||.+..+.++.+||||||||+||||+| |+.||.+....+....++
T Consensus 340 ~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le- 418 (468)
T KOG0197|consen 340 LVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLE- 418 (468)
T ss_pred ceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHh-
Confidence 999999999999665555543333 468999999999999999999999999999998 999999887766555443
Q ss_pred cccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
.+.++ ..|..++.++.+++..||..+|++|||++.+...|+++...
T Consensus 419 ------~GyRl----------p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 419 ------RGYRL----------PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ------ccCcC----------CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 22222 23778899999999999999999999999999999987653
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-47 Score=366.35 Aligned_cols=249 Identities=21% Similarity=0.348 Sum_probs=201.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..+|...+.||+|+||+||+|++.+... .+++|.+.... .....+.+..|+.+|+.++|||||.|++++..+ +.
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~---~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~--~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGT---EVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD--DF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCc---eEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC--Ce
Confidence 4678888999999999999999876553 33333332222 445567788999999999999999999999887 89
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC------CcEEEe
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD------FSAKLS 326 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~------~~vkl~ 326 (473)
+|||||||+||+|.++|+.+ +.+++.++..++.|++.||++||+++ ||||||||.||||+.. -.+||+
T Consensus 84 i~lVMEyC~gGDLs~yi~~~---~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIA 157 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRRR---GRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIA 157 (429)
T ss_pred EEEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEec
Confidence 99999999999999999654 37999999999999999999999999 9999999999999764 468999
Q ss_pred ccCCCcccCCCCc-cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 327 GYGCAGHIPETDI-SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 327 DFGla~~~~~~~~-~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
|||+|+.+..... .+.+|++.|||||++....|+.|+|+||+|+|+|+|++|.+||......+....++....
T Consensus 158 DFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~------ 231 (429)
T KOG0595|consen 158 DFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE------ 231 (429)
T ss_pred ccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc------
Confidence 9999999976644 567999999999999999999999999999999999999999998777666554433221
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 448 (473)
+...++...+..+.+++...++.++.+|.+..+-
T Consensus 232 ---------~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 232 ---------IVPVLPAELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred ---------ccCchhhhccCchhhhhhHHHhcCccccCchHHh
Confidence 1112233444555667777777777777665543
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-48 Score=370.16 Aligned_cols=253 Identities=17% Similarity=0.252 Sum_probs=207.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh------hhHhHHHHHHHHHhCCCCCcccceeeeec
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ------GVKEFINDVNTLASLQHPNLCKLLGFHAR 247 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~ 247 (473)
.+.|...+.||+|+||.|-+|. ...+++.+|+|++....... ....+.+|+++|++++|||||++++++..
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~---e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAY---EKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV 247 (475)
T ss_pred cceeEeeeeecCCceeEEEEEE---EcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence 4567888999999999999998 56677888888876543211 23446799999999999999999999987
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---CcEE
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---FSAK 324 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~~vk 324 (473)
. +..||||||+.||+|.+.+.. .+.+.+..-+.+++|++.||.|||++| |+||||||+|||+..+ ..+|
T Consensus 248 ~--ds~YmVlE~v~GGeLfd~vv~---nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llK 319 (475)
T KOG0615|consen 248 P--DSSYMVLEYVEGGELFDKVVA---NKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLK 319 (475)
T ss_pred C--CceEEEEEEecCccHHHHHHh---ccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEE
Confidence 6 788999999999999999954 446788888999999999999999999 9999999999999766 7799
Q ss_pred EeccCCCcccCCCC-ccCcccccccCChhhhhcCC---CCCcCCchHHHHHHHHHHcCCCCCCCCChHH-HHhHhhhccc
Q 011995 325 LSGYGCAGHIPETD-ISNSSVAAANLSVETLERGL---LTPKSNVWSFGIVLLELLTGRKNLDSRHPKE-ERNLVKWSRP 399 (473)
Q Consensus 325 l~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~---~s~~sDvwSlGvvl~elltG~~p~~~~~~~~-~~~~~~~~~~ 399 (473)
|+|||+|+...... +.+.+||+.|.|||++.+.. +..++||||+||+||.+++|.+||.+..... ..+.+...+-
T Consensus 320 ItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y 399 (475)
T KOG0615|consen 320 ITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY 399 (475)
T ss_pred ecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc
Confidence 99999999886553 46779999999999997654 3348899999999999999999998765443 3333322111
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. ........++++..+||.+||..||++|||+.|+|+.
T Consensus 400 ~--------------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 400 A--------------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred c--------------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 0 0011245788999999999999999999999999874
No 8
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-47 Score=371.10 Aligned_cols=267 Identities=22% Similarity=0.272 Sum_probs=217.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.+.|+....||+|+||.||+|+ +..+++.+|+|.+++.. ......-..+||.||++|.|||||+|.+...+.....
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr---~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKAR---DLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEee---ecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 3456666899999999999998 66788899999998876 3444566789999999999999999999998875678
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|||+|||++ +|..++. ..+..|+..+++.++.|++.||+|||.++ |+|||||.+|||||.+|.+||+|||||+
T Consensus 193 iYlVFeYMdh-DL~GLl~--~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr 266 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLS--SPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLAR 266 (560)
T ss_pred EEEEEecccc-hhhhhhc--CCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEecccccee
Confidence 9999999987 8988884 34567999999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCC---CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc-
Q 011995 333 HIPET---DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL- 407 (473)
Q Consensus 333 ~~~~~---~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 407 (473)
++... .+++.++|.||.|||.+.|.. |+.+.|+||.||||.||++|++.|.+..+.++.+.|-.......++.+.
T Consensus 267 ~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~ 346 (560)
T KOG0600|consen 267 FYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPV 346 (560)
T ss_pred eccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccc
Confidence 77543 467789999999999998864 9999999999999999999999999999888877663221111111110
Q ss_pred ---c--ccccc------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 408 ---S--LIMDP------QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 408 ---~--~~~~~------~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. ..+.+ .+.+. -...+....+|+..+|..||.+|.|+.++|+
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccCCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0 01111 11111 1234567789999999999999999999885
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.4e-47 Score=347.19 Aligned_cols=264 Identities=18% Similarity=0.277 Sum_probs=206.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChh-hHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG-VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
+.|+...++|+|+||+||+|+.+ .++..+|+|...-...... .+-.++||.+|++++|+|+|.|+++|... ..+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk---~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk--rkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNK---DTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRK--RKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccC---CcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhc--cee
Confidence 46777899999999999999844 4556655555443333333 44568999999999999999999999776 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+||+|||+. ++.+-|... ...++...+.+++.|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+.
T Consensus 77 hLVFE~~dh-TvL~eLe~~--p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~ 150 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERY--PNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFART 150 (396)
T ss_pred EEEeeecch-HHHHHHHhc--cCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHh
Confidence 999999988 444445433 334888999999999999999999999 99999999999999999999999999998
Q ss_pred cC--CCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc-cc-------cc
Q 011995 334 IP--ETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR-PF-------LA 402 (473)
Q Consensus 334 ~~--~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~-~~-------~~ 402 (473)
+. ...++..+.|.||.|||.+.+ ..|+..+|||++||++.||++|++.|.+..+.++...|.... .. ..
T Consensus 151 L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 151 LSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred hcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 85 334566788999999999988 569999999999999999999999999988777665553211 00 11
Q ss_pred c-----ccccccccccc-cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 403 D-----DCRLSLIMDPQ-LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 403 ~-----~~~~~~~~~~~-l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. +..+....++. +...++ ..+.-+.+|+..||+.||++|++.++++.
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1 11111111211 122222 55668899999999999999999999985
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.3e-48 Score=350.55 Aligned_cols=259 Identities=15% Similarity=0.225 Sum_probs=206.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|++.++||+|.||.||++.. ..+++.++.|.+.... .....+....|+.+|++|+|||||+++++...++..-++
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~---~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQC---LLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHcCCcchheEEeee---ccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 466669999999999999983 3344555555444432 345567789999999999999999999865544435589
Q ss_pred EEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC-CceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 255 LIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGP-FQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~-~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
||||||++|+|..++... .....+++.++++++.|++.||.++|..-+ ..|+||||||.||+|+.+|.|||+||||++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 999999999999998553 345678999999999999999999998331 139999999999999999999999999999
Q ss_pred ccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.+.... ..+.+|||.||+||.+.+..|+.+|||||+||++|||+.-++||.+.+-.+.-..|...
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg------------- 243 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG------------- 243 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-------------
Confidence 886553 24568999999999999999999999999999999999999999987544433222211
Q ss_pred cccccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 411 MDPQLKGRFP-LKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 411 ~~~~l~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
. ...+| ...+.++..+|..|+..||..||+.-.++..+..
T Consensus 244 ---d-~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 244 ---D-YPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ---C-CCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1 11124 6788999999999999999999996555555543
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-46 Score=354.77 Aligned_cols=243 Identities=19% Similarity=0.248 Sum_probs=206.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|+..+.||+|+||.||.++.. .+.+.+|+|+.+... .....+...+|..||..++||+||+++-.|++. +
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~---dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~--~ 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKK---DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE--E 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEc---ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC--C
Confidence 457888899999999999999854 567888888766542 334567889999999999999999998777665 8
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+|||+||+.||.|.-+|. ..+.+++..+.-++.+|+.||.|||+++ ||||||||+|||||.+|+++|+||||+
T Consensus 99 kLylVld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLC 172 (357)
T ss_pred eEEEEEeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccc
Confidence 9999999999999999994 3457999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
+..... ...+.+||+.|||||++.+..|+.++|+||||+++|||++|.+||...+.....+.+....
T Consensus 173 k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k----------- 241 (357)
T KOG0598|consen 173 KEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK----------- 241 (357)
T ss_pred hhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----------
Confidence 855332 3455699999999999999999999999999999999999999999888766655443221
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT 444 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt 444 (473)
....+...+.++++++.++|.+||.+|.-
T Consensus 242 ------~~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 242 ------LPLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred ------CCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 00113346788999999999999999963
No 12
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.6e-45 Score=333.48 Aligned_cols=265 Identities=18% Similarity=0.278 Sum_probs=215.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh-hhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.+|...+.||+|.||+||+|+ +..+++.+|+|.+++....+ ......+||+.|+.++|+||+.++++|... +.+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~---d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~--~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKAR---DTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK--SNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEE---ecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC--Cce
Confidence 357777999999999999998 55677888888877765433 346789999999999999999999999766 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
.||+|||+. +|...+.. ....++...+..++.++++||+|||.++ |+||||||.|+||+.+|.+||+|||+|+.
T Consensus 77 ~lVfEfm~t-dLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~ 150 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARF 150 (318)
T ss_pred EEEEEeccc-cHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhc
Confidence 999999966 99999954 4567899999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCC--ccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc--------cccc
Q 011995 334 IPETD--ISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR--------PFLA 402 (473)
Q Consensus 334 ~~~~~--~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~--------~~~~ 402 (473)
+.... ....+.|.||.|||.+.|.. |+...||||.|||+.||+-|.+-|.+..+.++...+-.+. |-+.
T Consensus 151 f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 151 FGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred cCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccc
Confidence 86543 34448899999999997764 9999999999999999999999999988887776663221 1111
Q ss_pred ---cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 403 ---DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 403 ---~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+-..+...-.+.+..-| ..++.++.+|+..+|..||.+|+|+.|++++
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf-~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLF-PAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccHHHHhcCCCCcccccc-ccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111111122222222 3566777999999999999999999999864
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-45 Score=361.19 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=214.4
Q ss_pred HHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeec
Q 011995 171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHAR 247 (473)
Q Consensus 171 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~ 247 (473)
....++|..++.||+|+|++|++|+ +..+.+.+|+||.... ..+..++.+.+|-++|.+| .||.||+|+--|.+
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~---~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD 145 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAR---EKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD 145 (604)
T ss_pred cCChhhcchhheeccccceeEEEee---ecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec
Confidence 4556889999999999999999998 4557788888875433 2344556778899999999 89999999877766
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
+ ..+|+|+||+++|+|.++|.+ -+.|++.....++.+|+.||+|||++| ||||||||+|||||.||.+||.|
T Consensus 146 ~--~sLYFvLe~A~nGdll~~i~K---~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITD 217 (604)
T KOG0592|consen 146 E--ESLYFVLEYAPNGDLLDLIKK---YGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITD 217 (604)
T ss_pred c--cceEEEEEecCCCcHHHHHHH---hCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEee
Confidence 5 899999999999999999954 357999999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccCCCC---------------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh
Q 011995 328 YGCAGHIPETD---------------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN 392 (473)
Q Consensus 328 FGla~~~~~~~---------------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~ 392 (473)
||.|+.+.... ...++||..|.+||++..+..++.+|||+||||||.|+.|.+||.+.++.....
T Consensus 218 FGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq 297 (604)
T KOG0592|consen 218 FGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ 297 (604)
T ss_pred ccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHH
Confidence 99998774211 134789999999999999999999999999999999999999999888766555
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.|.. +.-.|+...++.+.+||.++|..||.+|+|..+|.++
T Consensus 298 kI~~------------------l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 298 KIQA------------------LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHH------------------hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 4431 1123456666899999999999999999999888654
No 14
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-45 Score=355.53 Aligned_cols=257 Identities=21% Similarity=0.343 Sum_probs=203.3
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|...+.||+|+||+||++...++ +...++|......... .+.+.+|+.+|++++|||||+++|.........++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~---g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKT---GELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred chhhhhccccCccceEEEEEEecCC---Ccceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 4567779999999999999996653 3344455554442222 67789999999999999999999975443213689
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC-CCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK-DFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~-~~~vkl~DFGla~~ 333 (473)
+.|||+++|+|.+++.... + .|++..+..++.||+.||+|||+++ ||||||||+|||++. ++.+||+|||++..
T Consensus 93 i~mEy~~~GsL~~~~~~~g-~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYG-G-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeeeccCCCcHHHHHHHcC-C-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccc
Confidence 9999999999999996542 2 7999999999999999999999999 999999999999999 79999999999987
Q ss_pred cCC-----CCccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCC-ChHHHHhHhhhcccccccccc
Q 011995 334 IPE-----TDISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSR-HPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 334 ~~~-----~~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 406 (473)
... .......||+.|||||++..+ ....++|||||||+++||+||.+||... ........+
T Consensus 168 ~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~i------------ 235 (313)
T KOG0198|consen 168 LESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLI------------ 235 (313)
T ss_pred cccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHH------------
Confidence 652 223456889999999999853 3446999999999999999999999863 211111111
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
........+|..++.++.+|+.+|+.+||++||||.++|+..--..
T Consensus 236 ----g~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 236 ----GREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred ----hccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 0001112456778899999999999999999999999998766433
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-44 Score=355.65 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=207.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
..|.....||+|..|.||.|.-.. ....++++.+.+. .....+-+++|+.+|+..+|+|||.+++.|... +.+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~---~~~~VaiK~m~l~-~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~--deLW 346 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKIS---TKQEVAIKRMDLR-KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG--DELW 346 (550)
T ss_pred hhhcchhhhccccccceeeeeecc---CCceEEEEEEEec-cCCchhhhHHHHHHHHhccchHHHHHHHHhccc--ceeE
Confidence 346777899999999999998433 3333444444332 223345578999999999999999999988876 8899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|||||++|+|.|.+. ...+++.+++.|++++++||+|||.++ |+|||||.+|||++.+|.+||+|||++..+
T Consensus 347 VVMEym~ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi 419 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQI 419 (550)
T ss_pred EEEeecCCCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecc
Confidence 9999999999999983 345999999999999999999999999 999999999999999999999999998776
Q ss_pred CCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
... ...+.+||+.|||||++....|+++.||||||+|++||+.|++||-..++.....++.-.
T Consensus 420 ~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n--------------- 484 (550)
T KOG0578|consen 420 SEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN--------------- 484 (550)
T ss_pred ccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc---------------
Confidence 544 345669999999999999999999999999999999999999999877666555444211
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....-..+..++..+++|+.+||+.|+.+|+++.|+|+.
T Consensus 485 g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 485 GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 111223477889999999999999999999999999974
No 16
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.9e-45 Score=340.30 Aligned_cols=267 Identities=19% Similarity=0.241 Sum_probs=214.7
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhh-HhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|+..+.|++|+||.||+|+ +..+...+|.|..+......+. -.-++||.+|.+++|||||.+-.+.....-+.+|
T Consensus 77 efe~lnrI~EGtyGiVYRak---dk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAK---DKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHhhcccCcceeEEEec---cCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 34555999999999999998 5556666666666554433332 3468999999999999999999998877778899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
||||||++ +|..++... ..+|...+++.++.|++.||+|||.++ |+|||||++|+|+++.|.+||+|||+|+.+
T Consensus 154 ~VMe~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeHHHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhh
Confidence 99999977 999988543 467999999999999999999999999 999999999999999999999999999988
Q ss_pred CCC--CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc--------ccccc
Q 011995 335 PET--DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR--------PFLAD 403 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~--------~~~~~ 403 (473)
... .++..++|.||.|||.+.+.. |+.+.||||+|||+.||+++.+.|.+....++.+.|-... |-+..
T Consensus 228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 654 467779999999999998765 9999999999999999999999999988877766553111 11110
Q ss_pred c-----cccccccccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 D-----CRLSLIMDPQLKGRFPLK-AARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~-----~~~~~~~~~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
- ..........++..|+.. .++..++|+..+|..||.+|.|+.|.|+.
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 0 011111222344455544 67889999999999999999999999864
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-46 Score=359.06 Aligned_cols=266 Identities=19% Similarity=0.247 Sum_probs=210.2
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHh--HHHHHHHHHhCC-CCCcccceeeeecCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE--FINDVNTLASLQ-HPNLCKLLGFHARDG 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ei~~l~~l~-HpnIv~l~g~~~~~~ 249 (473)
..++|...+.||.|+||.||+|+-. ..+..+|+|.++.+ -...++ =+||+..|++++ |||||+|.+++.+..
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~---~~~~~VAIK~MK~K--f~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~ 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSK---ETGELVAIKKMKKK--FYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND 82 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeec---CCCceeeHHHHHhh--hccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC
Confidence 3567888899999999999999843 34444444433322 222333 368999999998 999999999988763
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
..+++|||||+. +|.+++..+ ...|++..+..|+.||++||+|+|.+| +.|||+||+|||+..+..+||+|||
T Consensus 83 -~~L~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFG 155 (538)
T KOG0661|consen 83 -RILYFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFG 155 (538)
T ss_pred -ceEeeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccc
Confidence 399999999966 999999665 678999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCC-CccCcccccccCChhhhh-cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc----
Q 011995 330 CAGHIPET-DISNSSVAAANLSVETLE-RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD---- 403 (473)
Q Consensus 330 la~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---- 403 (473)
+|+.+... .++..+.|.||.|||++. .+.|+.+.|||++|||++|+++-++.|.+.++.++...+......-..
T Consensus 156 LARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 156 LAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred cccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 99988655 456678899999999985 566999999999999999999999999999888877666432111111
Q ss_pred -ccccccccccc--------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 -DCRLSLIMDPQ--------LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 -~~~~~~~~~~~--------l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+..+...++=. +..-++ +++.++.++|.+|+.+||.+||||.++++.
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111111111 111122 488999999999999999999999999975
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-44 Score=356.69 Aligned_cols=263 Identities=21% Similarity=0.345 Sum_probs=209.1
Q ss_pred CCcCCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcc
Q 011995 161 TLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLC 239 (473)
Q Consensus 161 ~~~~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv 239 (473)
....++++|+... ..||+|.||+||+|.|.++. |||+.... ...+..+.|++|+.++++-+|.||+
T Consensus 385 ~~WeIp~~ev~l~-------~rIGsGsFGtV~Rg~whGdV------AVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIl 451 (678)
T KOG0193|consen 385 EEWEIPPEEVLLG-------ERIGSGSFGTVYRGRWHGDV------AVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENIL 451 (678)
T ss_pred cccccCHHHhhcc-------ceeccccccceeecccccce------EEEEEecCCCCHHHHHHHHHHHHHHhhcchhhhe
Confidence 4455666666544 89999999999999998763 24444333 3555678899999999999999999
Q ss_pred cceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 240 ~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
-+.|||..+ .+.||..+|.|-+|+.+|+.. ...|+..+...||.||++|+.|||.++ |||||||..||+|++
T Consensus 452 LFMG~~~~p---~~AIiTqwCeGsSLY~hlHv~--etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~ 523 (678)
T KOG0193|consen 452 LFMGACMNP---PLAIITQWCEGSSLYTHLHVQ--ETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHE 523 (678)
T ss_pred eeehhhcCC---ceeeeehhccCchhhhhccch--hhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEcc
Confidence 999999765 449999999999999999754 357999999999999999999999999 999999999999999
Q ss_pred CCcEEEeccCCCcccC----CCCccCcccccccCChhhhhc---CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh
Q 011995 320 DFSAKLSGYGCAGHIP----ETDISNSSVAAANLSVETLER---GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN 392 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~----~~~~~~~~~t~~y~aPE~~~~---~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~ 392 (473)
++.|||+||||+..-. ........+...|||||++.. ..|++.+||||||||+|||+||..||......+
T Consensus 524 ~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq--- 600 (678)
T KOG0193|consen 524 DLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ--- 600 (678)
T ss_pred CCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh---
Confidence 9999999999986432 233445567789999999854 358999999999999999999999998433222
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
|-|.. ..+.. ..|. .....++..++.+|+..||..++++||.+.+||..|+.+..
T Consensus 601 -IifmV---GrG~l---~pd~---s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 601 -IIFMV---GRGYL---MPDL---SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred -eEEEe---ccccc---Cccc---hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 22211 11100 0000 01134677899999999999999999999999998888776
No 19
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3e-45 Score=378.97 Aligned_cols=261 Identities=25% Similarity=0.417 Sum_probs=224.5
Q ss_pred cCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 179 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
..+.||+|.||.||+|...+.........|+||.+++ +.+...+|.+|+++|..++|||||+|+|.|..+ +.+|||
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~--~P~~Mv 567 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG--DPLCMV 567 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC--CeeEEE
Confidence 3389999999999999987776666777788887765 344678999999999999999999999999877 899999
Q ss_pred EEeccCCChhhhhhcCC-------CC----CCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEE
Q 011995 257 YERLFHGSLDRLIYGRS-------DG----PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 325 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~-------~~----~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl 325 (473)
+|||..|||.++|.... .+ .+|+..+.+.||.|||.|++||-++. +|||||.+.|+||+++..|||
T Consensus 568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VKI 644 (774)
T KOG1026|consen 568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVKI 644 (774)
T ss_pred EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEEe
Confidence 99999999999996532 12 23889999999999999999999998 999999999999999999999
Q ss_pred eccCCCcccCCCCccCcc----cccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccc
Q 011995 326 SGYGCAGHIPETDISNSS----VAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPF 400 (473)
Q Consensus 326 ~DFGla~~~~~~~~~~~~----~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 400 (473)
+|||+++.+...++.... ..++||+||.+..++|+.+||||||||+|||+++ |..||.+....+-.+.+...
T Consensus 645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g--- 721 (774)
T KOG1026|consen 645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG--- 721 (774)
T ss_pred cccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC---
Confidence 999999998887765443 4579999999999999999999999999999998 89999887666654444321
Q ss_pred cccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
++ -..|.+++.++++|+..||+.+|.+||++.||-..|+.+......
T Consensus 722 -------------~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 722 -------------QL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred -------------Cc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 11 134788999999999999999999999999999999988765543
No 20
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.3e-44 Score=357.34 Aligned_cols=265 Identities=21% Similarity=0.344 Sum_probs=205.7
Q ss_pred hcccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|++.+.||+|+||.||+|.+.. .......+++|+............+.+|+.++..+ +|||||+++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN- 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC-
Confidence 3578888999999999999997532 22333445555554333344456789999999999 8999999999887543
Q ss_pred CceEEEEEeccCCChhhhhhcCCC--------------------------------------------------------
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSD-------------------------------------------------------- 274 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~-------------------------------------------------------- 274 (473)
..+++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 568999999999999999864311
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCc----cCcccccc
Q 011995 275 ---GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAA 347 (473)
Q Consensus 275 ---~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~ 347 (473)
...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....... ....++..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 134888999999999999999999999 99999999999999999999999999976533211 12234578
Q ss_pred cCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHH
Q 011995 348 NLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAART 426 (473)
Q Consensus 348 y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 426 (473)
|+|||++.+..++.++|||||||++|||++ |..||.+.......... +..+. ....+..++..
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~------~~~~~----------~~~~~~~~~~~ 305 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQR------LKDGT----------RMRAPENATPE 305 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH------HhcCC----------CCCCCCCCCHH
Confidence 999999998899999999999999999997 99999865432211100 00000 00113345678
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 427 VADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 427 l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
+.+++.+||+.||.+|||+.+|++.|+++..+
T Consensus 306 l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 306 IYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999987653
No 21
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-45 Score=352.17 Aligned_cols=248 Identities=21% Similarity=0.328 Sum_probs=215.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
.|....+||+|.||.||+|. +..+.+.+++|++.+.......+.+.+|+.+|..++++||.++||.+..+ ..+++
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~---d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g--~~Lwi 88 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAI---DNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG--TKLWI 88 (467)
T ss_pred ccccchhccccccceeeeee---eccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec--ccHHH
Confidence 46666899999999999998 66688999999999998888889999999999999999999999998876 88999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
+||||.+|++.+.|. .+..+++..+..++.+++.||.|||.++ .+|||||+.|||+..+|.+||+|||++....
T Consensus 89 iMey~~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~ 162 (467)
T KOG0201|consen 89 IMEYCGGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLT 162 (467)
T ss_pred HHHHhcCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeee
Confidence 999999999999993 4455688899999999999999999999 9999999999999999999999999998776
Q ss_pred CCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 336 ETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 336 ~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
... ..+++||+.|||||++....|+.++||||||++.+||.+|.+|+...+++.... ++..
T Consensus 163 ~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf-----------------lIpk 225 (467)
T KOG0201|consen 163 NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF-----------------LIPK 225 (467)
T ss_pred chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE-----------------eccC
Confidence 553 357799999999999998899999999999999999999999999877633221 1111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....+...++..+++|+..||.+||+.||+|.++|+.
T Consensus 226 ~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 226 SAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 22222334667889999999999999999999999864
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-44 Score=343.01 Aligned_cols=261 Identities=21% Similarity=0.304 Sum_probs=211.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.+.|+....||.|..++||+|+.. .....+++|+..+.........+.+|+..|+.++||||++++..|..+ ..+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~---p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~--~~L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCI---PTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD--SEL 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeec---ccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec--cee
Confidence 356888899999999999999843 344666777777776666789999999999999999999999888876 899
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|+||.||.+||+.+++...... .+++..+..|+++++.||.|||.+| .||||||+.||||+.+|.|||+|||.+..
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~ 175 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSAS 175 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeee
Confidence 9999999999999999764333 4999999999999999999999999 99999999999999999999999998755
Q ss_pred cCCC------CccCcccccccCChhhhh--cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 334 IPET------DISNSSVAAANLSVETLE--RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 334 ~~~~------~~~~~~~t~~y~aPE~~~--~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
+... +..+.++|++|||||++. ...|+.|+||||||++.+||.+|+.||....+.......-...+....
T Consensus 176 l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~-- 253 (516)
T KOG0582|consen 176 LFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL-- 253 (516)
T ss_pred ecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc--
Confidence 4322 124568899999999953 345999999999999999999999999988776655433322222111
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+..+-....+..+++++..||++||.+|||++++++.
T Consensus 254 ------t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 254 ------TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred ------cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 0011111133456689999999999999999999999863
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=353.21 Aligned_cols=249 Identities=20% Similarity=0.252 Sum_probs=207.2
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC---CC-hhhHhHHHHHHHHHhCC-CCCcccceeeee
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SS-QGVKEFINDVNTLASLQ-HPNLCKLLGFHA 246 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~ 246 (473)
...++|..++.||+|+||.|+.|.... +...+++++..... .. ...+.+.+|+.++++++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~---t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~ 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRL---TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeecc---CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe
Confidence 446789999999999999999998543 33555666443321 11 34566778999999998 999999999998
Q ss_pred cCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEE
Q 011995 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKL 325 (473)
Q Consensus 247 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl 325 (473)
.. ..+++||||+.+|+|.+++.. ..++.+..+..++.|++.|++|||+++ |+||||||+|||++.+ +++||
T Consensus 91 t~--~~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl 162 (370)
T KOG0583|consen 91 TP--TKIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKL 162 (370)
T ss_pred cC--CeEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEE
Confidence 87 669999999999999999954 457899999999999999999999999 9999999999999999 99999
Q ss_pred eccCCCcccC--CCCccCcccccccCChhhhhcCC-CC-CcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc
Q 011995 326 SGYGCAGHIP--ETDISNSSVAAANLSVETLERGL-LT-PKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL 401 (473)
Q Consensus 326 ~DFGla~~~~--~~~~~~~~~t~~y~aPE~~~~~~-~s-~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 401 (473)
+|||++.... .....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||...+.......+....
T Consensus 163 ~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~--- 239 (370)
T KOG0583|consen 163 SDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGE--- 239 (370)
T ss_pred eccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCC---
Confidence 9999999883 34567789999999999999877 75 78999999999999999999999865544433322110
Q ss_pred ccccccccccccccCCCCCHHH-HHHHHHHHHHhcccCCCCCCCHHHHH
Q 011995 402 ADDCRLSLIMDPQLKGRFPLKA-ARTVADIALRCLQKEPSERPTMRSIF 449 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~~-~~~l~~li~~cl~~dP~~RPt~~eil 449 (473)
-.+|..+ +.++..++.+||..||.+|+|+.+|+
T Consensus 240 ---------------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 240 ---------------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ---------------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 1234444 89999999999999999999999999
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.6e-43 Score=348.44 Aligned_cols=246 Identities=21% Similarity=0.318 Sum_probs=207.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|.+...||+|.||+||+|+ ...+.+.++++.+... ..+...+.+.+|++|++.++|||||.++++|+.. .++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgr---rK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~--~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGR---RKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS--AHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecc---cccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc--ceE
Confidence 467777899999999999998 5556667777765443 2444567799999999999999999999999876 899
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|+|.||+.| +|..+|. ....+++..+..|+.+++.||.|||+.+ |+|||+||.|||++..|.+|+||||+|+.
T Consensus 77 ~vVte~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~ 149 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARA 149 (808)
T ss_pred EEEehhhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhh
Confidence 999999966 9999994 4557999999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 334 IPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
+..+. .+...||+.|||||.+.+..|+..+|+||+|||+|||++|++||...... +++.. ...+
T Consensus 150 m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~---~Lv~~---I~~d-------- 215 (808)
T KOG0597|consen 150 MSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT---QLVKS---ILKD-------- 215 (808)
T ss_pred cccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH---HHHHH---HhcC--------
Confidence 75442 35568999999999999999999999999999999999999999653322 22221 1111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+. .+|.+.+..+.+|+...|.+||.+|.|-.+++.
T Consensus 216 -~v---~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 216 -PV---KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -CC---CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 11 236688999999999999999999999998875
No 25
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-42 Score=344.97 Aligned_cols=267 Identities=19% Similarity=0.298 Sum_probs=206.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||++..... ...+++++............+.+|+++|+.++||||+++++++..+ +..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPS---GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCC---CcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--CEE
Confidence 36788999999999999999986543 3455566655443444567899999999999999999999998776 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ .|+||||||+|||++.++.+||+|||++..
T Consensus 79 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 153 (331)
T cd06649 79 SICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (331)
T ss_pred EEEeecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccc
Confidence 999999999999999954 335899999999999999999999864 399999999999999999999999999987
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc-------
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR------- 406 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 406 (473)
..........++..|+|||++.+..++.++|||||||++|||++|+.||......+....+.. +.......
T Consensus 154 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 231 (331)
T cd06649 154 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGR--PVVDGEEGEPHSISP 231 (331)
T ss_pred ccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc--cccccccCCccccCc
Confidence 655444556788999999999988899999999999999999999999976554332221110 00000000
Q ss_pred -------------------------cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 407 -------------------------LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 407 -------------------------~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
...+.............+.++.+|+.+||+.||++|||+.+|++.-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000000000001123567899999999999999999999998764
No 26
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=347.99 Aligned_cols=251 Identities=22% Similarity=0.396 Sum_probs=210.0
Q ss_pred CCCcCCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcc
Q 011995 160 GTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239 (473)
Q Consensus 160 ~~~~~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv 239 (473)
.....+++++|... .-||.|+.|.||+|++.+..++ ||+.+ +.-..+|+-|++|+|+|||
T Consensus 116 ~e~WeiPFe~IsEL-------eWlGSGaQGAVF~Grl~netVA-------VKKV~------elkETdIKHLRkLkH~NII 175 (904)
T KOG4721|consen 116 EELWEIPFEEISEL-------EWLGSGAQGAVFLGRLHNETVA-------VKKVR------ELKETDIKHLRKLKHPNII 175 (904)
T ss_pred hhhccCCHHHhhhh-------hhhccCcccceeeeeccCceeh-------hHHHh------hhhhhhHHHHHhccCccee
Confidence 45667888988877 7899999999999999876643 32221 2223688999999999999
Q ss_pred cceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 240 ~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
.+.|+|... .++|||||||+.|-|...|. .+..+.......|..+||.|+.|||.+. |||||||.=||||..
T Consensus 176 ~FkGVCtqs--PcyCIiMEfCa~GqL~~VLk---a~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~ 247 (904)
T KOG4721|consen 176 TFKGVCTQS--PCYCIIMEFCAQGQLYEVLK---AGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISY 247 (904)
T ss_pred eEeeeecCC--ceeEEeeeccccccHHHHHh---ccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeec
Confidence 999999876 89999999999999999994 4567888999999999999999999998 999999999999999
Q ss_pred CCcEEEeccCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc
Q 011995 320 DFSAKLSGYGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 398 (473)
+..|||+|||-++...... ...+.||..|||||++.+...+.|+|||||||||||||||..||.+-+... |-|.
T Consensus 248 ~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----IIwG- 322 (904)
T KOG4721|consen 248 DDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----IIWG- 322 (904)
T ss_pred cceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----eEEe-
Confidence 9999999999988765442 345789999999999999999999999999999999999999998654322 1121
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
+-...+.-..|..++.-+.-|+++||+..|..||++++|+..|+-
T Consensus 323 -----------VGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 323 -----------VGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred -----------ccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 111122223467788999999999999999999999999999984
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-43 Score=352.74 Aligned_cols=249 Identities=18% Similarity=0.236 Sum_probs=213.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
+-|+.++-||.|+-|.|-.|+ +..++...++|++... ........+.+||.||+.+.||||+.+|+++++. .+
T Consensus 12 GpwkLgkTLG~Gstg~vrlak---h~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~--~~ 86 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAK---HAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK--QH 86 (786)
T ss_pred cceeccccccCCCCceehhhh---cccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccC--ce
Confidence 457788999999999999998 5556666667766544 2333456788999999999999999999999876 89
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|||+||+++|.|++++.. .+++++.++++++.||+.|+.|||..+ |+||||||+|+|||..+++||+|||+|.
T Consensus 87 lylvlEyv~gGELFdylv~---kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAs 160 (786)
T KOG0588|consen 87 LYLVLEYVPGGELFDYLVR---KGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMAS 160 (786)
T ss_pred EEEEEEecCCchhHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceee
Confidence 9999999999999999954 357999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC-CccCcccccccCChhhhhcCCCC-CcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPET-DISNSSVAAANLSVETLERGLLT-PKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~s-~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.-..+ ...+.||.+.|.+||++.|..|. .++||||.|||||.||||+.||++.+.......++...
T Consensus 161 Le~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~------------ 228 (786)
T KOG0588|consen 161 LEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV------------ 228 (786)
T ss_pred cccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc------------
Confidence 76544 45678999999999999999985 78999999999999999999999877666555444221
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
...|.+++.++++|+.+||..||++|.|++||+++-
T Consensus 229 ------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 229 ------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred ------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 123678889999999999999999999999999864
No 28
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-42 Score=336.28 Aligned_cols=265 Identities=18% Similarity=0.300 Sum_probs=207.1
Q ss_pred CCCCcCCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCC
Q 011995 159 TGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHP 236 (473)
Q Consensus 159 ~~~~~~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~Hp 236 (473)
....+.++.+++. ......||+|++|.||+|.+.+. .+++|+..... .....+.|.+|+.+|.+++||
T Consensus 9 ~~~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 78 (283)
T PHA02988 9 INDIKCIESDDID-----KYTSVLIKENDQNSIYKGIFNNK-----EVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSN 78 (283)
T ss_pred cCcceecCHHHcC-----CCCCeEEeeCCceEEEEEEECCE-----EEEEEeccccccccHHHHHHHHHHHHHHHhcCCC
Confidence 3455667777773 33336799999999999997443 33344333221 122246788999999999999
Q ss_pred Ccccceeeeec--CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCC
Q 011995 237 NLCKLLGFHAR--DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTA 313 (473)
Q Consensus 237 nIv~l~g~~~~--~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~ 313 (473)
|||+++|++.+ ++...+++||||+++|+|.+++.. ...+++.....++.+++.||.|||.. + ++||||||+
T Consensus 79 nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~ 152 (283)
T PHA02988 79 NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSV 152 (283)
T ss_pred CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChh
Confidence 99999999876 434678999999999999999954 34689999999999999999999985 6 889999999
Q ss_pred ceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhc--CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHH
Q 011995 314 NIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLER--GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER 391 (473)
Q Consensus 314 NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~--~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~ 391 (473)
|||++.++.+||+|||++....... ....++..|+|||++.+ ..++.++|||||||++|||++|..||......+..
T Consensus 153 nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~ 231 (283)
T PHA02988 153 SFLVTENYKLKIICHGLEKILSSPP-FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY 231 (283)
T ss_pred hEEECCCCcEEEcccchHhhhcccc-ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 9999999999999999987654322 34467889999999976 67999999999999999999999999876544332
Q ss_pred hHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 392 NLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
..+. ... ....++..++..+.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus 232 ~~i~------~~~----------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 232 DLII------NKN----------NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHH------hcC----------CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 2211 000 011123345678999999999999999999999999998764
No 29
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.7e-42 Score=339.24 Aligned_cols=265 Identities=20% Similarity=0.360 Sum_probs=202.3
Q ss_pred cccccCcceeecCCceEEEEEECCCC-------------eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDA-------------STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKL 241 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l 241 (473)
++|...+.||+|+||.||+|.+.+.. .....+++|+............|.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 46888899999999999999865432 12234555555443344456789999999999999999999
Q ss_pred eeeeecCCCCceEEEEEeccCCChhhhhhcCC----------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCce
Q 011995 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRS----------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQA 305 (473)
Q Consensus 242 ~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~i 305 (473)
++++.+. +..++||||+.+|+|.+++.... ....+++..+..++.||+.||.|||+.+ |
T Consensus 85 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i 159 (304)
T cd05096 85 LGVCVDE--DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---F 159 (304)
T ss_pred EEEEecC--CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---c
Confidence 9999876 77999999999999999885421 1134788999999999999999999999 9
Q ss_pred eecCCCCCceeeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc--CC
Q 011995 306 MYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT--GR 379 (473)
Q Consensus 306 vHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt--G~ 379 (473)
+||||||+|||++.++.+||+|||+++....... ....++..|+|||++.++.++.++|||||||++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999976543322 22344678999999988889999999999999999986 56
Q ss_pred CCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 380 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.||...........+. ........ ......+..++..+.+|+.+||+.||.+|||+.+|.+.|++
T Consensus 240 ~p~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTDEQVIENAG---EFFRDQGR-------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCHHHHHHHHH---HHhhhccc-------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 7787654333221111 00000000 00001123455789999999999999999999999998863
No 30
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-43 Score=323.07 Aligned_cols=238 Identities=16% Similarity=0.236 Sum_probs=203.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|+..+.||.|+||.|.+++.+. ++..+|+|+..... .-...+...+|..+|+.+.||+++++++-+.+. ..
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~---~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~--~~ 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKH---SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN--SN 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEcc---CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC--Ce
Confidence 456667999999999999998544 45566666654432 223346678899999999999999999888765 89
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+||||||++||.|..+|++ .++|++..+..+|.||+.||+|||+.+ |++|||||+|||||.+|.+||.|||+|+
T Consensus 119 lymvmeyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK 192 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAK 192 (355)
T ss_pred EEEEEeccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceE
Confidence 9999999999999999954 457999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 333 HIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 333 ~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... ..+.+||+.|+|||.++...|+.++|.|+|||++|||+.|.+||...++....+.|...
T Consensus 193 ~v~~r-T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~--------------- 256 (355)
T KOG0616|consen 193 RVSGR-TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG--------------- 256 (355)
T ss_pred EecCc-EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC---------------
Confidence 87554 66789999999999999999999999999999999999999999988876655444311
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSER 442 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~R 442 (473)
. -.||...+.++.+|+..+|+.|-.+|
T Consensus 257 -~--v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 -K--VKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred -c--ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 1 13577788999999999999999999
No 31
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-42 Score=348.76 Aligned_cols=243 Identities=19% Similarity=0.275 Sum_probs=209.0
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~ 249 (473)
..++|...++||+|.||.|+++.+..+. ..+|+|+.+... ....++..+.|..|+... +||.++.|+..|.+.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~---e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~- 441 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTN---EYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK- 441 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCC---cEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC-
Confidence 3567888899999999999999976544 466676665442 556778889999998888 599999999999877
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
+++|+||||+.||++..+. ....|++..+..++.+|+.||+|||+++ |||||||.+|||||.+|.+||+|||
T Consensus 442 -~~l~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFG 513 (694)
T KOG0694|consen 442 -EHLFFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFG 513 (694)
T ss_pred -CeEEEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccc
Confidence 8999999999999965554 3346999999999999999999999999 9999999999999999999999999
Q ss_pred CCccc--CCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 330 CAGHI--PETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 330 la~~~--~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
+++.. .....++.+||+.|||||++.+..|+.++|+|||||+||||+.|+.||.+.++.+..+-|....
T Consensus 514 lcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~--------- 584 (694)
T KOG0694|consen 514 LCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE--------- 584 (694)
T ss_pred cccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC---------
Confidence 99764 3445677899999999999999999999999999999999999999999988877666543211
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM 445 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 445 (473)
..||..++.++.+++.++|.++|++|.-+
T Consensus 585 ---------~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 ---------VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---------CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 13577888999999999999999999866
No 32
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-43 Score=314.31 Aligned_cols=251 Identities=19% Similarity=0.254 Sum_probs=212.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|++++.||+|-||.||.|+.+.+. -.+++||.-.. ...+...++.+|++|-+.|+||||+++|+||.++ .
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~---~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~--~ 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSL---FIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS--K 95 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCC---cEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc--c
Confidence 467888899999999999999965543 33444443322 1334457899999999999999999999999877 8
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..||++||...|+|...|... ....+++.....++.|+|.||.|+|..+ ||||||||+|+|++.++.+||+|||-+
T Consensus 96 riyLilEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred eeEEEEEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCce
Confidence 899999999999999999653 3556899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 332 GHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 332 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
...+.+...+.+||..|++||...+...+..+|+|++|++.||++.|.+||......+....+....
T Consensus 172 V~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~------------- 238 (281)
T KOG0580|consen 172 VHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD------------- 238 (281)
T ss_pred eecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc-------------
Confidence 8877777778899999999999999999999999999999999999999998766444333332111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
-.+|..++..+.++|.+|+.++|.+|.+..|+++.
T Consensus 239 -----~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 239 -----LKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -----ccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 12366788999999999999999999999999875
No 33
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-43 Score=373.49 Aligned_cols=259 Identities=23% Similarity=0.410 Sum_probs=218.2
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
+....+.||+|.||.||+|.+.+.......+.+++|.+.. +.+...+|.+|..+|+.++|||||+++|+|.+. ...
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~--~~~ 770 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS--GPP 770 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC--CCc
Confidence 3445588999999999999997765544456666666654 577788999999999999999999999999985 788
Q ss_pred EEEEEeccCCChhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 254 MLIYERLFHGSLDRLIYGRS----DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
+|++|||.+|+|..+|+... ....+.....+.++.+||+|+.||++++ +|||||...|+||++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 99999999999999997531 1456899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCCCccCccc----ccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccc
Q 011995 330 CAGHIPETDISNSSV----AAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 330 la~~~~~~~~~~~~~----t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
+|+.+...++....+ ...|||||.+..+.++.++|||||||++||++| |..||...+..+....+. ..+
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~------~gg 921 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVL------EGG 921 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHH------hCC
Confidence 999776655543322 368999999999999999999999999999998 999999887666543221 111
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
++ ..|..++..+.++|.+||+.+|++||++..|++.+..+.
T Consensus 922 -RL----------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 922 -RL----------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred -cc----------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 11 237788899999999999999999999999999888654
No 34
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.7e-42 Score=329.46 Aligned_cols=257 Identities=20% Similarity=0.329 Sum_probs=204.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|++.+.||+|+||.||+|.+.........++++.............+.+|+.++..++||||++++|++... +..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG--NTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC--CCcE
Confidence 46888899999999999999875443344455555554433344456789999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.++++|||.+...
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 83 IVTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 999999999999998643 346899999999999999999999999 999999999999999999999999987654
Q ss_pred CCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
..... ....++..|+|||.+.+..++.++|||||||++|||++ |..||...........+. ++.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-------~~~----- 225 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVE-------DGF----- 225 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-------CCC-----
Confidence 22211 11234568999999999999999999999999999775 999998765443222211 100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
....+..++..+.+++.+||+.+|.+||++.+|++.|+++
T Consensus 226 -----~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 -----RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0011344567899999999999999999999999999865
No 35
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-43 Score=337.99 Aligned_cols=256 Identities=20% Similarity=0.261 Sum_probs=207.8
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC--------Ch-----hhHhHHHHHHHHHhCCCCCc
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--------SQ-----GVKEFINDVNTLASLQHPNL 238 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~--------~~-----~~~~~~~Ei~~l~~l~HpnI 238 (473)
...+.|++.+.||+|.||.|-+|. +....+.+|+|+.....- .. -.+.+.+||.+|++++||||
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar---~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLAR---DEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred eehhheehhhhhcCCccceEEEEe---ecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 456889999999999999999998 555566777776543311 11 12578899999999999999
Q ss_pred ccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCC-CCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee
Q 011995 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP-IDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI 317 (473)
Q Consensus 239 v~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl 317 (473)
|+|+++..+...+.+|||+|||..|.+...= ...+ +++.++.+++.+++.||+|||.++ ||||||||+|+||
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl 243 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLL 243 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEE
Confidence 9999999888889999999999999875432 3334 999999999999999999999999 9999999999999
Q ss_pred CCCCcEEEeccCCCcccCCC-------CccCcccccccCChhhhhcCC----CCCcCCchHHHHHHHHHHcCCCCCCCCC
Q 011995 318 DKDFSAKLSGYGCAGHIPET-------DISNSSVAAANLSVETLERGL----LTPKSNVWSFGIVLLELLTGRKNLDSRH 386 (473)
Q Consensus 318 ~~~~~vkl~DFGla~~~~~~-------~~~~~~~t~~y~aPE~~~~~~----~s~~sDvwSlGvvl~elltG~~p~~~~~ 386 (473)
+++|.|||+|||.+..+... ......||+.|||||.+.++. .+.+.||||+||+||.|+.|+.||-+..
T Consensus 244 ~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~ 323 (576)
T KOG0585|consen 244 SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF 323 (576)
T ss_pred cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch
Confidence 99999999999999866322 234578999999999997743 3578999999999999999999998876
Q ss_pred hHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 387 PKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
..+..+.| ++..+.-....++.+++.+||.++|.+||++|.+..+|....-
T Consensus 324 ~~~l~~KI----------------vn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 324 ELELFDKI----------------VNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred HHHHHHHH----------------hcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 65544433 2222222222356789999999999999999999999977654
No 36
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8e-42 Score=343.16 Aligned_cols=246 Identities=18% Similarity=0.287 Sum_probs=190.8
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
|+..+.||+|+||.||+|....+ ++.+++|+............+.+|+++++.++|+||+++++++... +.+++|
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 150 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPT---GRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN--GEIQVL 150 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCC---CCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC--CeEEEE
Confidence 44458999999999999986533 3455666654444444567889999999999999999999998765 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|||+++|+|.+.. .+.+..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..+..
T Consensus 151 ~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 151 LEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred EecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 9999999986533 3567788899999999999999999 99999999999999999999999999987643
Q ss_pred CC--ccCcccccccCChhhhhc-----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 337 TD--ISNSSVAAANLSVETLER-----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 337 ~~--~~~~~~t~~y~aPE~~~~-----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
.. .....++..|+|||++.. ...+.++|||||||++|||++|+.||............... ..
T Consensus 221 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~----------~~ 290 (353)
T PLN00034 221 TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI----------CM 290 (353)
T ss_pred ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH----------hc
Confidence 32 234578899999998743 22456899999999999999999999743322111111100 00
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
......+..++.++.+||.+||+.||++|||+.||++.
T Consensus 291 ----~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 291 ----SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ----cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011233556789999999999999999999999975
No 37
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.8e-42 Score=341.05 Aligned_cols=245 Identities=18% Similarity=0.236 Sum_probs=202.2
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
..++|+....||+|+||.||+|+- ..++..+|+|+.+... ....++.++.|-.+|....+++||+||-.|.+.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarK---k~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~-- 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARK---KDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK-- 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEE---ccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC--
Confidence 357899999999999999999984 4466777777765432 344567889999999999999999998777665
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+.+||||||++||++-.+|.. ...|++..+..++.+++.||+-||+.| +|||||||+|+|||..|++||+||||
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGL 287 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGL 287 (550)
T ss_pred CeeEEEEEecCCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccc
Confidence 899999999999999999943 457999999999999999999999999 99999999999999999999999999
Q ss_pred CcccCC----------------------CC---------------------------ccCcccccccCChhhhhcCCCCC
Q 011995 331 AGHIPE----------------------TD---------------------------ISNSSVAAANLSVETLERGLLTP 361 (473)
Q Consensus 331 a~~~~~----------------------~~---------------------------~~~~~~t~~y~aPE~~~~~~~s~ 361 (473)
+.-+.. .+ ....+|||.|||||++.+..|+.
T Consensus 288 s~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~ 367 (550)
T KOG0605|consen 288 STGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGK 367 (550)
T ss_pred cchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCc
Confidence 842210 00 12356899999999999999999
Q ss_pred cCCchHHHHHHHHHHcCCCCCCCCChHHHHhH-hhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCC
Q 011995 362 KSNVWSFGIVLLELLTGRKNLDSRHPKEERNL-VKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPS 440 (473)
Q Consensus 362 ~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~ 440 (473)
.+|+||||||+||||.|.+||....+.+.-.. +.|...+... -...++.++.+||.+|+. ||+
T Consensus 368 ~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP---------------~~~~~s~eA~DLI~rll~-d~~ 431 (550)
T KOG0605|consen 368 ECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFP---------------EEVDLSDEAKDLITRLLC-DPE 431 (550)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCC---------------CcCcccHHHHHHHHHHhc-CHH
Confidence 99999999999999999999999888776543 3443221110 022345899999999999 999
Q ss_pred CCCC
Q 011995 441 ERPT 444 (473)
Q Consensus 441 ~RPt 444 (473)
+|.-
T Consensus 432 ~RLG 435 (550)
T KOG0605|consen 432 NRLG 435 (550)
T ss_pred HhcC
Confidence 9976
No 38
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=349.09 Aligned_cols=262 Identities=22% Similarity=0.391 Sum_probs=213.9
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeE-EEEEEEec--CCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKK-FEATVTRL--NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
+-...++||+|+||.||+|++......... +|++..+. ........+|.+|.++|+.++|||||++||++... ..
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~--~P 235 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE--EP 235 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--Cc
Confidence 334448999999999999998654332222 45555543 13456678999999999999999999999999876 88
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
++||||+|.||+|.++|.... ..++..++..++.++|.||+|||+++ +|||||...|+|++.++.+||+|||+++
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNK--KSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCcccccc
Confidence 999999999999999996543 36999999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCcc--CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 333 HIPETDIS--NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 333 ~~~~~~~~--~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....-... .......|+|||.+..+.|+.++|||||||++||+++ |..||.+....+....+...
T Consensus 311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~------------ 378 (474)
T KOG0194|consen 311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKN------------ 378 (474)
T ss_pred CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhc------------
Confidence 65422221 2235689999999999999999999999999999998 88999988776655444111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
..+-..+...+.++..++.+||..||++||+|.++.+.|+.+.....
T Consensus 379 ----~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 379 ----GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ----CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 11112244667889999999999999999999999999999886655
No 39
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.3e-42 Score=346.53 Aligned_cols=260 Identities=19% Similarity=0.319 Sum_probs=201.1
Q ss_pred cccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
++|+..+.||+|+||.||+|++.. .......+++|+.+........+.+.+|+.+|..+ +|||||+++++|... +
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~--~ 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG--G 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC--C
Confidence 457778999999999999997522 12233445555544333344456789999999999 899999999999766 7
Q ss_pred ceEEEEEeccCCChhhhhhcCC----------------------------------------------------------
Q 011995 252 QRMLIYERLFHGSLDRLIYGRS---------------------------------------------------------- 273 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 273 (473)
..++||||+++|+|.+++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 8999999999999999986421
Q ss_pred --------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCc
Q 011995 274 --------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI 339 (473)
Q Consensus 274 --------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~ 339 (473)
....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 1125789999999999999999999999 99999999999999999999999999976643321
Q ss_pred c----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 340 S----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 340 ~----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
. ...++..|+|||++.+..++.++|||||||++|||++ |..||......... ..+ +..+.
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~--~~~----~~~~~--------- 334 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKF--YKM----IKEGY--------- 334 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHH--HHH----HHhCc---------
Confidence 1 1233467999999999999999999999999999998 89999765432211 111 01110
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
....+...+.++.+|+.+||+.||++||++.+|++.|++.
T Consensus 335 -~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 335 -RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0011223456899999999999999999999999999864
No 40
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.6e-42 Score=324.70 Aligned_cols=277 Identities=17% Similarity=0.206 Sum_probs=211.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh-hhHhHHHHHHHHHhCCCCC-cccceeeeecCC---
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-GVKEFINDVNTLASLQHPN-LCKLLGFHARDG--- 249 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Ei~~l~~l~Hpn-Iv~l~g~~~~~~--- 249 (473)
..|...++||+|+||+||+|+. ..+++.+++|..++....+ .-....+|+.+|+.++|+| ||.|++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~---~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARS---KRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEE---ecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence 3455558899999999999994 4455777888888876533 3456789999999999999 999999998762
Q ss_pred -CCceEEEEEeccCCChhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 250 -SDQRMLIYERLFHGSLDRLIYGRSDG-PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 250 -~~~~~lV~E~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
...++||+||++. +|.+++...... ..++...++.++.||+.||+|||+++ |+||||||.||||+.+|.+||+|
T Consensus 88 ~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 88 GIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred ccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeec
Confidence 1278999999955 999999654321 35777899999999999999999999 99999999999999999999999
Q ss_pred cCCCcccC--CCCccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 328 YGCAGHIP--ETDISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 328 FGla~~~~--~~~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
||+|+... ...+++.++|.+|.|||++.+. .|+...||||+|||+.||+++++.|.+..+.++...+-.....-...
T Consensus 164 FGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 164 FGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred cchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 99998764 3346777999999999999887 59999999999999999999999999987766554442111110000
Q ss_pred cccccccccc----cCC-----CCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhhcc
Q 011995 405 CRLSLIMDPQ----LKG-----RFP---LKAARTVADIALRCLQKEPSERPTMRSIFEE--LDRQESR 458 (473)
Q Consensus 405 ~~~~~~~~~~----l~~-----~~~---~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~l~~~ 458 (473)
.+.....-+. ... .+. .....+..+++.+||+.+|.+|.|+..++++ +..+...
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 0000000000 000 011 1222578899999999999999999999987 6655443
No 41
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.7e-42 Score=347.25 Aligned_cols=261 Identities=21% Similarity=0.324 Sum_probs=202.7
Q ss_pred cccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
++|+..+.||+|+||.||+|.... .....+.+++|+............+.+|+++++.+ +|+|||+++++|... +
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~--~ 115 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG--G 115 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC--C
Confidence 467788999999999999998532 22233445555554433344456788999999999 899999999998766 7
Q ss_pred ceEEEEEeccCCChhhhhhcCC----------------------------------------------------------
Q 011995 252 QRMLIYERLFHGSLDRLIYGRS---------------------------------------------------------- 273 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 273 (473)
..++||||+++|+|.+++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 8999999999999999885421
Q ss_pred ---------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCcc----
Q 011995 274 ---------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIS---- 340 (473)
Q Consensus 274 ---------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~---- 340 (473)
....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.........
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 1135788999999999999999999999 999999999999999999999999998765332211
Q ss_pred CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCC
Q 011995 341 NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419 (473)
Q Consensus 341 ~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 419 (473)
...++..|||||++.+..++.++|||||||++|||++ |..||............. . .......
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~------~----------~~~~~~~ 336 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV------K----------RGYQMSR 336 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH------H----------cccCccC
Confidence 1233467999999988889999999999999999997 999997654322111100 0 0001111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 420 PLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 420 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
+...+.++.+++.+||+.||.+|||+.+|++.|+++.
T Consensus 337 ~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 337 PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 2234578999999999999999999999999999864
No 42
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.9e-42 Score=335.44 Aligned_cols=247 Identities=15% Similarity=0.193 Sum_probs=201.3
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|+..+.||+|+||.||+|.... ..+.+++|+..... .......+.+|+++++.++||||+++++++.+. +.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRI---SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ--RF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC--Ce
Confidence 468888999999999999998543 33455566554332 223456688999999999999999999988765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~ 149 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAK 149 (291)
T ss_pred EEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcch
Confidence 9999999999999999854 346899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 333 HIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 333 ~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... .....+++.|+|||++.+..++.++|||||||++|||++|..||...........+....
T Consensus 150 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-------------- 214 (291)
T cd05612 150 KLRDR-TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK-------------- 214 (291)
T ss_pred hccCC-cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--------------
Confidence 66432 234568899999999998889999999999999999999999998765544332221110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPT-----MRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 451 (473)
..++...+..+.+|+.+||+.||.+|++ +.++++.
T Consensus 215 ----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 215 ----LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ----cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 1123344678999999999999999995 8888765
No 43
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.5e-41 Score=327.39 Aligned_cols=259 Identities=21% Similarity=0.378 Sum_probs=207.1
Q ss_pred cccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|+..+.||+|+||.||+|...... ...+.++++.............|.+|+.++..++||||+++++++... ..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE--QP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC--Cc
Confidence 36777799999999999999875433 233455555544333444566789999999999999999999998765 77
Q ss_pred eEEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
.+++|||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcC
Confidence 8999999999999999865321 145889999999999999999999999 999999999999999
Q ss_pred CCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHh
Q 011995 320 DFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLV 394 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~ 394 (473)
++.++|+|||++....... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI 239 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999987653322 123345688999999988889999999999999999998 99999876554433222
Q ss_pred hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
... .....+..++.++.+|+.+||+.||.+||++.+|++.|+.+
T Consensus 240 ~~~-----------------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 240 RSR-----------------QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HcC-----------------CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 110 01112445678999999999999999999999999999853
No 44
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-41 Score=338.39 Aligned_cols=267 Identities=20% Similarity=0.316 Sum_probs=202.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||++..... ...+++++............+.+|+++++.++|+||+++++++.++ +..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPS---GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCC---CcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC--CEE
Confidence 36899999999999999999986533 3444555555443444557799999999999999999999999876 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ .|+|+||||+|||++.++.+||+|||++..
T Consensus 79 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 153 (333)
T cd06650 79 SICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (333)
T ss_pred EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchh
Confidence 999999999999999954 345889999999999999999999853 299999999999999999999999999876
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh----hcccccccccc---
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK----WSRPFLADDCR--- 406 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~----~~~~~~~~~~~--- 406 (473)
..........++..|+|||.+.+..++.++|||||||++|||++|+.||............. ...........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T cd06650 154 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP 233 (333)
T ss_pred hhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence 64443444568899999999998889999999999999999999999997654433221110 00000000000
Q ss_pred ---------------------cccccccccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 407 ---------------------LSLIMDPQLKGRFP-LKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 407 ---------------------~~~~~~~~l~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+.... ...++ ...+.++.+|+.+||++||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 234 PGRPLSSYGPDSRPPMAIFELLDYIVNEP-PPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccchhhhhcccccccccHHHHHHHHhcCC-CccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 00000000 00011 1245678999999999999999999999753
No 45
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=327.11 Aligned_cols=267 Identities=18% Similarity=0.251 Sum_probs=210.8
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeec---C
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR---D 248 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~---~ 248 (473)
....|...+.||+|+||.|+.+.... +++.+|+|.+... ......++..+|+.+|+.++|+|||.+++++.. +
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~---t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKR---TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD 96 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcC---CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc
Confidence 34556667899999999999998544 3455555544311 244556788999999999999999999998865 3
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
....+|+|+|+| ..+|...|.. +..|+...+..+++|+++||.|+|+.+ |+||||||+|+|++.+..+||+||
T Consensus 97 ~f~DvYiV~elM-etDL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHHc---CccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccc
Confidence 346799999999 5599999943 445999999999999999999999999 999999999999999999999999
Q ss_pred CCCcccC----CCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 329 GCAGHIP----ETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 329 Gla~~~~----~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
|+|+... ....+..+.|.||.|||.+.. ..|+.+.||||.|||+.||++|++.|.+.+..++..++....+...
T Consensus 170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~- 248 (359)
T KOG0660|consen 170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPS- 248 (359)
T ss_pred cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCC-
Confidence 9999885 344567788999999999855 4599999999999999999999999999888777776653332221
Q ss_pred ccccccccc----------c-----ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 DCRLSLIMD----------P-----QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~~~~~~----------~-----~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+..+.. + .+...|+ ++++.+.+|+.+||..||.+|+|++|.|+.
T Consensus 249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111111 0 0111123 677889999999999999999999999864
No 46
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.2e-41 Score=337.78 Aligned_cols=263 Identities=20% Similarity=0.361 Sum_probs=205.3
Q ss_pred cccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
++|++.+.||+|+||.||+|...+ +..+.+.+++|+.+........+.+..|+.++.++ +|+||++++++|...+ .
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~-~ 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG-G 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC-C
Confidence 468888999999999999997533 22344566666554333334456788999999999 8999999999887553 6
Q ss_pred ceEEEEEeccCCChhhhhhcCCC---------------------------------------------------------
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSD--------------------------------------------------------- 274 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~--------------------------------------------------------- 274 (473)
.++++|||+++|+|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 78999999999999999854221
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC----ccCcccccccC
Q 011995 275 -GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD----ISNSSVAAANL 349 (473)
Q Consensus 275 -~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~ 349 (473)
...++|..+..++.||+.||+|||+.+ |+||||||+|||++.++.++|+|||++..+.... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 126899999999999999999999998 9999999999999999999999999998763322 12223457899
Q ss_pred ChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHH
Q 011995 350 SVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVA 428 (473)
Q Consensus 350 aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 428 (473)
|||++.+..++.++|||||||++|||++ |..||.+....+... . .+... .....+...+.++.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~--~----~~~~~----------~~~~~~~~~~~~~~ 306 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFC--R----RLKEG----------TRMRAPEYATPEIY 306 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHH--H----HHhcc----------CCCCCCccCCHHHH
Confidence 9999999999999999999999999997 999997643322110 0 00000 00111334557899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 429 DIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 429 ~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
+++.+||+.+|++||++.||++.|+++..
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998765
No 47
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-41 Score=338.02 Aligned_cols=241 Identities=18% Similarity=0.248 Sum_probs=195.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
+.||+|+||.||++.... .++.+++|+..... .......+.+|+.++.+++||||+++++++... +..|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKA---TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH--DRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC--CEEEEEEe
Confidence 469999999999998544 34556666654321 233456778999999999999999999988766 78999999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC-
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET- 337 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~- 337 (473)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 76 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 149 (323)
T cd05571 76 YANGGELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC
Confidence 9999999999853 346899999999999999999999999 999999999999999999999999998754222
Q ss_pred -CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccC
Q 011995 338 -DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416 (473)
Q Consensus 338 -~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 416 (473)
......+|+.|+|||++.+..++.++|||||||++|||++|..||...........+... +
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--------------~---- 211 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--------------E---- 211 (323)
T ss_pred CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--------------C----
Confidence 223456899999999999989999999999999999999999999775543332222100 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 011995 417 GRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFE 450 (473)
Q Consensus 417 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~ 450 (473)
..++...+.++.+|+.+||+.||++|| ++.++++
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 212 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 122445668899999999999999999 7999875
No 48
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1e-41 Score=339.08 Aligned_cols=248 Identities=14% Similarity=0.217 Sum_probs=201.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+.++.+++||||+++++++..+ +
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGT---GEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE--N 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCC---CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC--C
Confidence 35788889999999999999986543 3455566554321 223456788999999999999999999998776 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~ 165 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFA 165 (329)
T ss_pred EEEEEEcCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCc
Confidence 89999999999999999854 346889999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 332 GHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 332 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
....... ....+++.|+|||++.+..++.++|||||||++|||++|..||.+.........+...
T Consensus 166 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~-------------- 230 (329)
T PTZ00263 166 KKVPDRT-FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG-------------- 230 (329)
T ss_pred eEcCCCc-ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--------------
Confidence 8664332 3457889999999999988999999999999999999999999876544332222110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPT-----MRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 451 (473)
. ..++...+..+.+|+.+||+.||.+|++ +.+++..
T Consensus 231 --~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 231 --R--LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred --C--cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0 0123335577899999999999999997 6777754
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2e-41 Score=330.04 Aligned_cols=253 Identities=19% Similarity=0.259 Sum_probs=199.3
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.|+..+.||+|+||.||+|....+ .+.+++++..... .......+.+|+.++..++|+||+++++++.++ +..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~--~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRAT---GKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK--DAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecC---CceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC--CeE
Confidence 367779999999999999986443 3445555443321 223345678999999999999999999988765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 76 ~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~ 151 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQ 151 (285)
T ss_pred EEEEEecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEE
Confidence 9999999999999888543 2346899999999999999999999999 99999999999999999999999999977
Q ss_pred cCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 334 IPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 334 ~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... .....++..|+|||++.+..++.++|||||||++|||++|+.||...........+... +.
T Consensus 152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~------------~~- 218 (285)
T cd05631 152 IPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR------------VK- 218 (285)
T ss_pred cCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH------------hh-
Confidence 64332 23456889999999999999999999999999999999999999865432211111100 00
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPT-----MRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 451 (473)
.....++...+.++.+|+.+||+.||.+||+ ++++++.
T Consensus 219 -~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 219 -EDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred -cccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 0011234456788999999999999999997 8888874
No 50
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.1e-41 Score=332.10 Aligned_cols=260 Identities=20% Similarity=0.342 Sum_probs=206.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.+|+..+.||+|+||.||+|.+..+.. ....+++|+..........+++.+|+.+++.++||||++++|+|.. ...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~---~~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---STV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC---CCc
Confidence 468888999999999999998754332 2334555554433344556789999999999999999999999875 457
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++|+||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 84 QLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccc
Confidence 8999999999999999643 345889999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
...... .....+..|++||.+.+..++.++|||||||++|||++ |..||.+....+....... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~-------~~~-- 229 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-------GER-- 229 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhC-------CCC--
Confidence 643321 12233568999999999999999999999999999998 9999987554332221111 000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
...+..++.++.+++.+||..||.+||++.+++..|.++....
T Consensus 230 --------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 230 --------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred --------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 0112234567899999999999999999999999999887544
No 51
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.9e-41 Score=330.68 Aligned_cols=265 Identities=17% Similarity=0.220 Sum_probs=200.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|+||.||+|....+ ...+++|+.+..........+.+|+.+++.++||||+++++++... +..+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLT---ENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE--RCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCC---CCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC--CeEE
Confidence 5688889999999999999985433 3455566555443334456778999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++ +|.+++... +..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 80 lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAK 153 (288)
T ss_pred EEEeCCCc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeec
Confidence 99999974 899888542 345789999999999999999999999 999999999999999999999999998765
Q ss_pred CCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc--------cccc
Q 011995 335 PET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP--------FLAD 403 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~--------~~~~ 403 (473)
... ......+++.|+|||.+.+ ..++.++|||||||++|||++|++||.+....+....+..... ....
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred cCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence 322 2234567899999999865 4589999999999999999999999987765544333211100 0000
Q ss_pred ccccccccccccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 DCRLSLIMDPQLKG----RFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 ~~~~~~~~~~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.........+.... ......+.++.+|+.+||+.||.+|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000011111000 001234578899999999999999999999985
No 52
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.4e-41 Score=328.35 Aligned_cols=265 Identities=15% Similarity=0.174 Sum_probs=200.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|++.+.||+|+||.||+|+...+ ...+++++..... .....+.+.+|+++++.++|+||+++++++..+ +..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKET---KEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR--GKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCC---CcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC--CEE
Confidence 4688899999999999999996543 3344555544332 233456788999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+.++.+..+.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 76 ~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~ 149 (287)
T cd07848 76 YLVFEYVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARN 149 (287)
T ss_pred EEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccc
Confidence 99999999877765542 2346899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccc--------
Q 011995 334 IPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA-------- 402 (473)
Q Consensus 334 ~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~-------- 402 (473)
..... .....++..|+|||++.+..++.++|||||||++|||++|++||...........+......+.
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 150 LSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred ccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 64322 2334678999999999988899999999999999999999999987654433222211100000
Q ss_pred ccccccccccccc------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 403 DDCRLSLIMDPQL------KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 403 ~~~~~~~~~~~~l------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..........+.. ...+....+.++.+|+.+||+.||++|||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000000 01112235678999999999999999999999985
No 53
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.7e-41 Score=342.77 Aligned_cols=263 Identities=17% Similarity=0.283 Sum_probs=205.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~ 250 (473)
.++|.+.+.||+|+||.||+|+..... .....+++|+..........+.+.+|+++|.++. |||||++++++...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~-- 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS-- 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC--
Confidence 356788899999999999999864322 2334455555543334444577999999999996 99999999999765
Q ss_pred CceEEEEEeccCCChhhhhhcCC---------------------------------------------------------
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRS--------------------------------------------------------- 273 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~--------------------------------------------------------- 273 (473)
+..||||||+++|+|.++|....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 78999999999999999886421
Q ss_pred ------------------------------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee
Q 011995 274 ------------------------------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI 317 (473)
Q Consensus 274 ------------------------------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl 317 (473)
....+++..+..++.||+.||.|||+.+ |+||||||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEE
Confidence 0134788899999999999999999999 9999999999999
Q ss_pred CCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHh
Q 011995 318 DKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERN 392 (473)
Q Consensus 318 ~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~ 392 (473)
+.++.+||+|||++........ ....++..|+|||.+.+..++.++|||||||++|||++ |..||..........
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 9999999999999876543221 22345678999999998889999999999999999997 999997643322111
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
.. +..+ .....+..++.++.+++.+||+.||++||++.+|.+.|+++.+
T Consensus 351 ~~------~~~~----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 351 NK------IKSG----------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HH------HhcC----------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 00 0000 0011233456789999999999999999999999999998754
No 54
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.8e-41 Score=336.42 Aligned_cols=254 Identities=17% Similarity=0.201 Sum_probs=203.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|++.+.||+|+||.||+|...+. ...+++|+..... .......+.+|++++..++||||+++++++... +.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDT---GEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD--EY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCC---CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC--CE
Confidence 4688899999999999999996543 3445555554321 223456788999999999999999999988765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.||||||+++|+|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~ 149 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSK 149 (333)
T ss_pred EEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCc
Confidence 9999999999999999953 346899999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh-hccccccccccccccc
Q 011995 333 HIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK-WSRPFLADDCRLSLIM 411 (473)
Q Consensus 333 ~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 411 (473)
.... ......+++.|+|||++.+..++.++|||||||++|||++|..||......+....+. |... ..
T Consensus 150 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~--------- 218 (333)
T cd05600 150 GIVT-YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET-LQ--------- 218 (333)
T ss_pred cccc-ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc-cc---------
Confidence 6543 3345578999999999998899999999999999999999999998766554333222 2110 00
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.. .......+.++.+++.+||..+|.+||++.++++.
T Consensus 219 ~~~~-~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 219 RPVY-DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCC-CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0000 00012456789999999999999999999999975
No 55
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.3e-40 Score=320.56 Aligned_cols=257 Identities=20% Similarity=0.363 Sum_probs=205.3
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||+|.+.........+++++............|.+|+.+++.++|+||+++++++... +..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS--RPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC--CceE
Confidence 57888899999999999999976543333444555544333444567789999999999999999999988765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+|+||||+|||++.++.++|+|||++...
T Consensus 82 iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 82 IITEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 999999999999999543 346899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC--cc--CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 335 PETD--IS--NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 335 ~~~~--~~--~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
.... .. ....+..|+|||.+.+..++.++||||||+++|||++ |..||...........+.. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-------~~---- 225 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVED-------GY---- 225 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHc-------CC----
Confidence 4211 11 1233568999999998889999999999999999998 9999976543332221110 00
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
....+..++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 226 ------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 ------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011234457889999999999999999999999999875
No 56
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.3e-42 Score=326.53 Aligned_cols=250 Identities=15% Similarity=0.250 Sum_probs=208.5
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
..++|++.+.||+|+||.|-+|. ....++.++++.++.. .+++..-.+.+||+||+.|+||||+.+|++|...
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~---e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk-- 125 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAY---EHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK-- 125 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehh---hccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC--
Confidence 34678888999999999999997 4345556666655543 2566677899999999999999999999999765
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+.+.|||||..+|.|+|++.. .+.|++.++..+++||..|+.|+|.++ ++|||||.+|||||.++++||+||||
T Consensus 126 dKIvivMEYaS~GeLYDYiSe---r~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGL 199 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYISE---RGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGL 199 (668)
T ss_pred ceEEEEEEecCCccHHHHHHH---hccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccch
Confidence 899999999999999999944 457999999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCC-ccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIPETD-ISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~~~~-~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
+..+.... ..+++|++-|.+||++.+..| ++.+|.|||||+||-|+.|..||++.+-......+...
T Consensus 200 SNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G----------- 268 (668)
T KOG0611|consen 200 SNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG----------- 268 (668)
T ss_pred hhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc-----------
Confidence 98876554 467899999999999999887 58999999999999999999999987544332222111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
.. +....+.++.-||+.||..+|++|.|+.+|...-
T Consensus 269 -----aY---rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 269 -----AY---REPETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred -----cc---cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 00 0123346678899999999999999999997653
No 57
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-42 Score=324.84 Aligned_cols=270 Identities=19% Similarity=0.239 Sum_probs=203.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC---
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD--- 251 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~--- 251 (473)
-.|...+++|+|+||+||+|.+... ...+|+|..-- .. +.--+|+++|+.+.|||||+|.-+|......
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~---~~~vAIKKv~~--d~---r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRET---EEEVAIKKVLQ--DK---RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCC---CceeEEEEecC--CC---CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchh
Confidence 3577779999999999999998765 34444443321 11 2223799999999999999999887754433
Q ss_pred ceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEeccC
Q 011995 252 QRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLSGYG 329 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~DFG 329 (473)
+..||||||+. +|.+.++.. ..+..++...++-++.||.+||.|||..+ |+||||||.|+|+|.+ |.+||||||
T Consensus 96 ~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 96 YLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred HHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCC
Confidence 67799999977 999988632 12456888889999999999999999998 9999999999999976 999999999
Q ss_pred CCcccCCCCcc-CcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 330 CAGHIPETDIS-NSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 330 la~~~~~~~~~-~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
.|+.+..+..+ +...|..|.|||.+.+.. |+.+.||||.|||+.||+-|++.|.+....++...+-.....-.++ .+
T Consensus 172 SAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e-~I 250 (364)
T KOG0658|consen 172 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTRE-DI 250 (364)
T ss_pred cceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHH-HH
Confidence 99988655443 446789999999998764 9999999999999999999999999987766554442111111100 00
Q ss_pred c-------cccccccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhhc
Q 011995 408 S-------LIMDPQLKG-----RFPLKAARTVADIALRCLQKEPSERPTMRSIFEE--LDRQES 457 (473)
Q Consensus 408 ~-------~~~~~~l~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~l~~ 457 (473)
. ....+.+.. -+....+.++.+|+.++|+.+|.+|.++.|++.. ++++..
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 0 111122211 1345677899999999999999999999999853 444443
No 58
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.5e-41 Score=336.51 Aligned_cols=249 Identities=15% Similarity=0.179 Sum_probs=201.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|.+.+.. ...+++++.... ........+.+|+.++..++||||+++++++.+. +
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--~ 104 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNED--FPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE--S 104 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCC--CeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC--C
Confidence 346888899999999999999864432 234445544322 1233456788999999999999999999999776 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..|+||||+.+|+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a 178 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFA 178 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCC
Confidence 89999999999999999954 346899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 332 GHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 332 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..... ......+|+.|+|||++.+..++.++|||||||++|||++|..||...........+...
T Consensus 179 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~-------------- 243 (340)
T PTZ00426 179 KVVDT-RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG-------------- 243 (340)
T ss_pred eecCC-CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC--------------
Confidence 76643 234457899999999999888999999999999999999999999876544322222100
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
. ..++...+..+.+++.+||+.||.+|+ +++++++.
T Consensus 244 --~--~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 244 --I--IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred --C--CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0 012344567789999999999999995 89988765
No 59
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.3e-40 Score=318.41 Aligned_cols=253 Identities=18% Similarity=0.321 Sum_probs=203.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|...+.||+|+||.||+|.+.+.. +.+++++ ..........+.+|+++++.++|+||+++++++..+ +..+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~---~~~~~K~--~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 78 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYS---LTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFY 78 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCC---ceEEEEE--ecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCC--CCcE
Confidence 35777799999999999999875432 3333433 333444567889999999999999999999998765 7889
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ....+++..++.++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||++...
T Consensus 79 lv~e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~ 154 (263)
T cd05052 79 IITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 154 (263)
T ss_pred EEEEeCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccc
Confidence 999999999999998653 2446899999999999999999999998 999999999999999999999999998776
Q ss_pred CCCCccC---cccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDISN---SSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~~~---~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
....... ...+..|+|||.+.+..++.++|||||||++|||++ |..||...........+..
T Consensus 155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-------------- 220 (263)
T cd05052 155 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-------------- 220 (263)
T ss_pred ccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC--------------
Confidence 4432221 223567999999998899999999999999999998 9999987554332222110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
......+..++..+.+++.+||..||++||++.++++.|+.+
T Consensus 221 ---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 221 ---GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 011122344568899999999999999999999999999875
No 60
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.1e-41 Score=324.17 Aligned_cols=250 Identities=28% Similarity=0.492 Sum_probs=194.7
Q ss_pred CcceeecCCceEEEEEEC-CCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEE
Q 011995 180 DRCISEGLSSVMYRASFG-DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
.+.||.|.||.||+|.+. ........+++++..........+.|.+|++++++++||||++++|++... +..++|||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~--~~~~lv~e 81 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN--EPLFLVME 81 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS--SSEEEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccc--cccccccc
Confidence 478999999999999988 333444555555553333444578999999999999999999999999854 66999999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD 338 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~ 338 (473)
|+++|+|.++|... ....+++..+..|+.||+.||.|||+++ ++|+||+++|||++.++.+||+|||++.......
T Consensus 82 ~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 82 YCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp --TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred cccccccccccccc-cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 99999999999765 2456999999999999999999999998 9999999999999999999999999997763221
Q ss_pred c----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 339 I----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 339 ~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
. ........|+|||.+.+..++.++||||||+++|||++ |+.||......+....+.....
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-------------- 223 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-------------- 223 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE--------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------------
Confidence 1 22345678999999999889999999999999999999 7899987655443222211110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
...+..++..+.+++.+||..||.+|||+.+|++.|
T Consensus 224 ---~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ---LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 112334567899999999999999999999999986
No 61
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-41 Score=335.30 Aligned_cols=252 Identities=21% Similarity=0.275 Sum_probs=215.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|...+.+|+|+||.++..+.. ...+.+.+|.+++.. +....+..++|+.++++++|||||.+.+.|..+ +.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk---~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~--~~ 77 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHK---SDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED--GQ 77 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhc---cCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC--Cc
Confidence 357888899999999999999743 334566677777654 445556789999999999999999999999877 55
Q ss_pred -eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 253 -RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 253 -~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
++|||+||+||+|.+.|.... +.-+++..+..|+.|++.|+.|||+.+ |+|||||+.||+++.++.|||+|||+|
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGla 153 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLA 153 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhh
Confidence 999999999999999997653 677999999999999999999999888 999999999999999999999999999
Q ss_pred cccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
+...... ..+..||+.||+||.+.+..|+.++|||||||++|||++-+++|...+.......+...
T Consensus 154 K~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~------------ 221 (426)
T KOG0589|consen 154 KILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRG------------ 221 (426)
T ss_pred hhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhc------------
Confidence 9987664 45678999999999999999999999999999999999999999887655543322211
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....+...+.++..+|..||..+|..||++.++|..
T Consensus 222 -----~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 -----LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -----cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1123366778999999999999999999999999976
No 62
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.6e-40 Score=375.30 Aligned_cols=267 Identities=26% Similarity=0.464 Sum_probs=203.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
...|...+.||+|+||.||+|....+. +.+++| .+.... .....|++++++++|||||+++|+|.+. +..
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~---~~vavK--~~~~~~---~~~~~~~~~l~~l~HpnIv~~~~~~~~~--~~~ 758 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNG---MQFVVK--EINDVN---SIPSSEIADMGKLQHPNIVKLIGLCRSE--KGA 758 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCC---cEEEEE--EccCCc---cccHHHHHHHhhCCCCCcceEEEEEEcC--CCC
Confidence 345777889999999999999864332 333344 332211 1223568999999999999999999876 678
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|+||||+++|+|.++++ .++|..+..++.||+.||+|||..+.++|+||||||+||+++.++..++. ||.+..
T Consensus 759 ~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~ 831 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGL 831 (968)
T ss_pred EEEEeCCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccc
Confidence 99999999999999993 28999999999999999999996644459999999999999999888875 666544
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
.... ....++..|||||++.+..++.++|||||||++|||+||+.||..... .....+.|.+.... ......+.++
T Consensus 832 ~~~~--~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~ 907 (968)
T PLN00113 832 LCTD--TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYS-DCHLDMWIDP 907 (968)
T ss_pred cccC--CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcC-ccchhheeCc
Confidence 3221 233678899999999998999999999999999999999999954322 12234445443222 2233445555
Q ss_pred ccCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 414 QLKGR--FPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 414 ~l~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
.+... .+.....++.+++.+||+.||++||||.||++.|+++....++
T Consensus 908 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~ 957 (968)
T PLN00113 908 SIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSS 957 (968)
T ss_pred cccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccc
Confidence 55332 3445667888999999999999999999999999998664443
No 63
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.5e-40 Score=321.28 Aligned_cols=259 Identities=19% Similarity=0.307 Sum_probs=203.3
Q ss_pred cccccCcceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||.||+|.+..+.. ....++++............++..|+.++.++.||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---ASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC---Ccc
Confidence 356777999999999999998754322 2334445444333333445678889999999999999999998743 567
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++++||+++|+|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.
T Consensus 84 ~~i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCcccee
Confidence 8999999999999999643 346899999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
..... .....++..|++||.+.++.++.++|||||||++|||++ |..||.+........++.- +...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-------~~~~- 230 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK-------GERL- 230 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-------CCcC-
Confidence 54322 122345678999999998899999999999999999998 9999987655443332221 0000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
..+..+..++.+++.+||..||++|||+.|+++.|..+...
T Consensus 231 ---------~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 231 ---------AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 00122346788999999999999999999999999987654
No 64
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.6e-41 Score=333.12 Aligned_cols=242 Identities=17% Similarity=0.243 Sum_probs=195.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
+.||+|+||.||++.... ..+.+++|+.... ........+.+|+.+++.++||||+++++++... +..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKA---SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK--DRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--CEEEEEEe
Confidence 469999999999998543 3445556655432 1234456788999999999999999999988765 78999999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC-
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET- 337 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~- 337 (473)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 76 y~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~ 149 (328)
T cd05593 76 YVNGGELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA 149 (328)
T ss_pred CCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcc
Confidence 9999999988843 346899999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccC
Q 011995 338 -DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416 (473)
Q Consensus 338 -~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 416 (473)
......+|+.|+|||++.+..++.++|||||||++|||++|+.||...........+... +
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~--------------~---- 211 (328)
T cd05593 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--------------D---- 211 (328)
T ss_pred cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC--------------C----
Confidence 223456899999999999888999999999999999999999999765543322222110 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 417 GRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 417 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
..++...+.++.+|+.+||+.||.+|+ ++.++++.
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 212 IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 112445567899999999999999997 89999864
No 65
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.7e-40 Score=322.87 Aligned_cols=270 Identities=22% Similarity=0.325 Sum_probs=204.1
Q ss_pred ccCcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 178 FSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 178 ~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
...+.||+|+||+||++.+.. .......+++|+............+.+|+++++.++||||+++++++........++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 777999999999999876532 1223445556655443333456778899999999999999999999876544678999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|||+++++|.+++.. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||++.....
T Consensus 87 ~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 87 MEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCC
Confidence 999999999999843 24999999999999999999999999 99999999999999999999999999876643
Q ss_pred CCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 337 TDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 337 ~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
... ....++..|++||.+.+..++.++|||||||++|||++|..||........ ....+..... ....+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 237 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQM-TVVRLIELL 237 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhccccccc-chhhhhhhh
Confidence 221 122345679999999888899999999999999999999999865432211 1111111000 000111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
+.......+...+..+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111112224455688999999999999999999999999999875
No 66
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.7e-40 Score=321.85 Aligned_cols=260 Identities=20% Similarity=0.348 Sum_probs=203.2
Q ss_pred HhcccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
..++|+..+.||+|+||.||+|.+.... .....+++++...........++.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~-- 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-- 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 4578999999999999999999865321 223445555443322333456788999999999999999999998765
Q ss_pred CceEEEEEeccCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcE
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSD-------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 323 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~v 323 (473)
...++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCE
Confidence 789999999999999999864321 234688899999999999999999998 9999999999999999999
Q ss_pred EEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcc
Q 011995 324 KLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 324 kl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 398 (473)
+|+|||++........ ....++..|+|||.+.+..++.++|||||||++|||++ |..||...........+....
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 238 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGG 238 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999876543322 12234678999999998889999999999999999999 789997765433222211000
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
. ...+..++..+.+++.+||+.||++|||+.|+++.|++
T Consensus 239 ----------------~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 239 ----------------L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ----------------c-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 0 01133445789999999999999999999999999863
No 67
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.6e-40 Score=322.03 Aligned_cols=258 Identities=21% Similarity=0.376 Sum_probs=205.2
Q ss_pred cccccCcceeecCCceEEEEEECCC--CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|.+.+.||+|+||.||+|...+. ....+.+++|+............+.+|+++|..++|+||+++++++... ..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG--DP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC--CC
Confidence 4577779999999999999986543 2233445555544333333567899999999999999999999998876 78
Q ss_pred eEEEEEeccCCChhhhhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRS-----------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~ 321 (473)
.++||||+++++|.+++.... ....+++..+..++.|++.||.|||+++ ++||||||+|||++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCC
Confidence 999999999999999996532 1245789999999999999999999999 99999999999999999
Q ss_pred cEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhh
Q 011995 322 SAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~ 396 (473)
.+||+|||++........ ....++..|+|||++.+..++.++|||||||++|||++ |..||...........+..
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~ 239 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ 239 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 999999999876533321 22234678999999999999999999999999999998 9999976654433222210
Q ss_pred cccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
. .....+...+..+.+++.+||+.||++||++.||++.|++
T Consensus 240 ~-----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 240 G-----------------RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred C-----------------CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 0 0001123456789999999999999999999999999863
No 68
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.9e-41 Score=331.68 Aligned_cols=239 Identities=18% Similarity=0.206 Sum_probs=192.5
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
||+|+||.||+|...++ .+.+++|+.... ........+.+|+.++.+++||||+++++++... +..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDT---QRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP--EKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC--CeEEEEEcCC
Confidence 79999999999986543 345556655432 1334456788999999999999999999988765 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC--C
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET--D 338 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~--~ 338 (473)
++|+|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 76 ~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 149 (312)
T cd05585 76 NGGELFHHLQR---EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK 149 (312)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc
Confidence 99999999854 346899999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCC
Q 011995 339 ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGR 418 (473)
Q Consensus 339 ~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 418 (473)
.....+|+.|+|||++.+..++.++|||||||++|||++|..||...........+.. . ...
T Consensus 150 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~------~------------~~~ 211 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ------E------------PLR 211 (312)
T ss_pred cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc------C------------CCC
Confidence 2345689999999999998999999999999999999999999987654332221110 0 012
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 011995 419 FPLKAARTVADIALRCLQKEPSERPT---MRSIFE 450 (473)
Q Consensus 419 ~~~~~~~~l~~li~~cl~~dP~~RPt---~~eil~ 450 (473)
++...+.++.+++.+||..||.+||+ +.+++.
T Consensus 212 ~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 212 FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 34456688999999999999999985 566654
No 69
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.3e-40 Score=322.32 Aligned_cols=263 Identities=22% Similarity=0.372 Sum_probs=205.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.+|...+.||+|+||.||+|...+.........++++.... .....+.+.+|++++++++|+||+++++++... +..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG--DPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC--Cce
Confidence 45777899999999999999864432222222234444432 233346789999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
++||||+++++|.+++.... ....+++..++.++.||+.||+|||+++ |+||||||+|||++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccC
Confidence 99999999999999996532 1235899999999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhh
Q 011995 321 FSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 395 (473)
+.++|+|||++........ ....++..|+|||.+.+..++.++|||||||++|||++ |..||...........+.
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 239 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT 239 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence 9999999999876543321 22345678999999998889999999999999999998 999997765443222111
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
. ... ...+...+..+.+++.+||+.||.+||++.+|++.|+++.+..
T Consensus 240 ~-------~~~----------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 240 Q-------GRV----------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred C-------CCC----------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 0 000 0112234578999999999999999999999999999986643
No 70
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.4e-40 Score=317.66 Aligned_cols=252 Identities=21% Similarity=0.374 Sum_probs=201.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|+||.||+|...++. . ++++.........+.+.+|+.+++.++|+||+++++++... +..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~----~--v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 77 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNST----K--VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE--EPIY 77 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCc----e--EEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--CCcE
Confidence 57888899999999999999865442 2 33333333344467899999999999999999999988665 7789
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 78 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 153 (261)
T cd05072 78 IITEYMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVI 153 (261)
T ss_pred EEEecCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceec
Confidence 999999999999998653 3456899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
..... ....++..|+|||++.+..++.++|||||||++|||++ |..||...........+... ..
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-------~~---- 222 (261)
T cd05072 154 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-------YR---- 222 (261)
T ss_pred CCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-------CC----
Confidence 43321 12234567999999988889999999999999999998 99999765543322221100 00
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
. .....++.++.+++.+||..+|++||++.++++.|+++
T Consensus 223 --~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 223 --M----PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred --C----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0 01123457789999999999999999999999999864
No 71
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3e-40 Score=323.70 Aligned_cols=262 Identities=19% Similarity=0.309 Sum_probs=204.3
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|++.+.||+|+||.||+|...++... ..++++...........+.+.+|++++.++ +||||+++++++... +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~-~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~--~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLK-MNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR--GYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCc-ceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC--Ccc
Confidence 5788889999999999999987654321 122333333222334456789999999999 799999999998765 679
Q ss_pred EEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+++ |+||||||+|||++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~ 155 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGEN 155 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCC
Confidence 99999999999999996432 1235889999999999999999999998 9999999999999999
Q ss_pred CcEEEeccCCCcccCCCCc-cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcc
Q 011995 321 FSAKLSGYGCAGHIPETDI-SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~~~-~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 398 (473)
+.+||+|||++........ .....+..|+|||++.+..++.++|||||||++|||++ |..||...........+..
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~-- 233 (297)
T cd05089 156 LASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-- 233 (297)
T ss_pred CeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc--
Confidence 9999999999864322111 11223457999999988889999999999999999997 9999987654432221110
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
......+..++..+.+|+.+||+.+|.+||++.++++.|+.+...+
T Consensus 234 ---------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 234 ---------------GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred ---------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 0011123345678999999999999999999999999999887654
No 72
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.4e-40 Score=325.39 Aligned_cols=263 Identities=21% Similarity=0.376 Sum_probs=205.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|++.+.||+|+||.||+|.+.++. ..+.++++... ........+.+|++++.++ +|+||+++++++..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~-- 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDG---LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-- 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCC---ceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC--
Confidence 467888899999999999999875432 22223333332 2344567889999999999 899999999998765
Q ss_pred CceEEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI 317 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl 317 (473)
+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEe
Confidence 78999999999999999996432 1236899999999999999999999999 9999999999999
Q ss_pred CCCCcEEEeccCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhh
Q 011995 318 DKDFSAKLSGYGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 318 ~~~~~vkl~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 395 (473)
+.++.+||+|||++....... ......+..|+|||.+.+..++.++|||||||++|||+| |..||......+....+.
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 237 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 237 (303)
T ss_pred cCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence 999999999999986432111 111233567999999988889999999999999999998 999997654433222111
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
. . .....+...+..+.+|+.+||+.+|.+||++.++++.|+++...+..
T Consensus 238 ~-------~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~ 286 (303)
T cd05088 238 Q-------G----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 286 (303)
T ss_pred c-------C----------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhh
Confidence 0 0 00011233457789999999999999999999999999988766654
No 73
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.4e-40 Score=316.91 Aligned_cols=249 Identities=18% Similarity=0.351 Sum_probs=198.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|+||.||++.+.+.. .++++ ...........+.+|+.++++++||||+++++++... +..+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~----~~a~K--~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 75 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQI----KVAIK--AINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ--KPLY 75 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCc----eEEEE--ecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccC--CCEE
Confidence 45777899999999999999875432 23333 3333333456789999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++|+|.+++... ...+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++...
T Consensus 76 iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~ 150 (256)
T cd05114 76 IVTEFMENGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYV 150 (256)
T ss_pred EEEEcCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCcccc
Confidence 999999999999998643 235899999999999999999999999 999999999999999999999999998765
Q ss_pred CCCCcc---CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDIS---NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~~---~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
...... ...++..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+... .. .
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~-------~~---~ 220 (256)
T cd05114 151 LDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG-------FR---L 220 (256)
T ss_pred CCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-------CC---C
Confidence 433222 1233467999999988889999999999999999999 99999876544332222110 00 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
..+...+..+.+++.+||+.||.+||++.++++.|.
T Consensus 221 -------~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 221 -------YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 012223467899999999999999999999998873
No 74
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.4e-40 Score=316.80 Aligned_cols=253 Identities=21% Similarity=0.359 Sum_probs=202.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|.+.++ +.++++. ........+++.+|+.++++++|+||+++++++... +..
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~----~~v~iK~--~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 76 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNT----TPVAVKT--LKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE--EPI 76 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCC----eEEEEEe--eCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecC--CCe
Confidence 35688889999999999999986543 2333433 333334457799999999999999999999988765 788
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++.... +..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 152 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARV 152 (261)
T ss_pred eeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEE
Confidence 99999999999999996542 456899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCccCcc---cccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETDISNSS---VAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~~~~~~---~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
.......... .+..|+|||++.+..++.++||||||+++|||++ |+.||.+.........+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~------------ 220 (261)
T cd05068 153 IKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG------------ 220 (261)
T ss_pred ccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC------------
Confidence 6533222222 2357999999988889999999999999999999 99999876544332222100
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
.....+...+..+.+++.+||+.+|.+||++.+|++.|+.+
T Consensus 221 -----~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 221 -----YRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred -----CCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 00011334567899999999999999999999999999864
No 75
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.2e-40 Score=330.43 Aligned_cols=245 Identities=18% Similarity=0.232 Sum_probs=197.5
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC---CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||++....+....+.+++|+.... ........+.+|+.+|+.++||||+++++++..+ +..|+||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~--~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG--GKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC--CeEEEEE
Confidence 6799999999999987554455666777765532 1223345678899999999999999999998776 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~ 337 (473)
||+++|+|.+++.. ...+.+..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 80 EYLSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred eCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 99999999999853 345788999999999999999999999 999999999999999999999999998754222
Q ss_pred --CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 338 --DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 338 --~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
......+++.|+|||++.+..++.++|||||||++|||++|..||...........+... .
T Consensus 154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~----------------~- 216 (323)
T cd05584 154 GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG----------------K- 216 (323)
T ss_pred CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC----------------C-
Confidence 223346889999999999888999999999999999999999999876544322222110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
..++...+..+.+|+.+||+.||++|| ++.++++.
T Consensus 217 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 217 -LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 012334567889999999999999999 78888763
No 76
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.7e-41 Score=332.36 Aligned_cols=242 Identities=17% Similarity=0.250 Sum_probs=194.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
+.||+|+||.||++.... .++.+++|+.... ........+.+|+.++..++||||+++++++... +..|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~--~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--DRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC--CEEEEEEe
Confidence 469999999999998543 3345556655432 1233456678899999999999999999988766 78999999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC-
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET- 337 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~- 337 (473)
|+++|+|..++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 76 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 149 (323)
T cd05595 76 YANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC
Confidence 9999999988843 346899999999999999999999999 999999999999999999999999998754222
Q ss_pred -CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccC
Q 011995 338 -DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416 (473)
Q Consensus 338 -~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 416 (473)
......+++.|+|||++.+..++.++|||||||++|||++|..||...........+... +
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~--------------~---- 211 (323)
T cd05595 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--------------E---- 211 (323)
T ss_pred CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------------C----
Confidence 223456889999999999889999999999999999999999999766544332222110 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 417 GRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 417 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
..++...+.++.+++.+||+.||.+|+ ++.++++.
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 212 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 012445568899999999999999998 88888763
No 77
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.6e-40 Score=320.59 Aligned_cols=258 Identities=21% Similarity=0.331 Sum_probs=202.1
Q ss_pred cccccCcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||.||+|.+.. +....+.++++.............+.+|+++++.++|+||+++++++... +..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE--QPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--Cce
Confidence 467778999999999999998532 22233444454444333344456789999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 254 MLIYERLFHGSLDRLIYGRSD--------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
|+||||+++++|.+++..... ...+++..+..++.|++.||.|||+++ |+|+||||+|||++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcC
Confidence 999999999999999853211 235789999999999999999999999 999999999999999
Q ss_pred CCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHh
Q 011995 320 DFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLV 394 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~ 394 (473)
++.+||+|||++....... .....++..|+|||++.+..++.++|||||||++|||++ |..||.+.........+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999997653322 122334567999999988889999999999999999998 99999765543322222
Q ss_pred hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.... ....+..++..+.+++.+||+.||++||++.+|++.|..
T Consensus 240 ~~~~-----------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 RKRQ-----------------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HcCC-----------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1100 001133455789999999999999999999999999875
No 78
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=308.94 Aligned_cols=257 Identities=18% Similarity=0.290 Sum_probs=209.4
Q ss_pred HHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC----Ch---hhHhHHHHHHHHHhC-CCCCcccc
Q 011995 170 VAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQ---GVKEFINDVNTLASL-QHPNLCKL 241 (473)
Q Consensus 170 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~Ei~~l~~l-~HpnIv~l 241 (473)
-....++|...+.||+|..++|-++. ...+++.++++++..... +. ..+.-++|+.||+++ .||+|+++
T Consensus 12 a~~fy~~y~pkeilgrgvss~vrRci---~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l 88 (411)
T KOG0599|consen 12 AKGFYAKYEPKEILGRGVSSVVRRCI---HKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDL 88 (411)
T ss_pred HhhHHhhcChHHHhcccchhhhhhhh---hcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEe
Confidence 34456788899999999999999998 445667777777665432 11 124456799999998 79999999
Q ss_pred eeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC
Q 011995 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321 (473)
Q Consensus 242 ~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~ 321 (473)
.+++..+ ..+++|+|.|+.|.|+|+|. ...++++....+|+.|+..|++|||.++ ||||||||+|||++++.
T Consensus 89 ~D~yes~--sF~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~ 160 (411)
T KOG0599|consen 89 QDVYESD--AFVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNM 160 (411)
T ss_pred eeeccCc--chhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeecccc
Confidence 9999876 88999999999999999994 3457999999999999999999999999 99999999999999999
Q ss_pred cEEEeccCCCcccCCC-CccCcccccccCChhhhhcC------CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh
Q 011995 322 SAKLSGYGCAGHIPET-DISNSSVAAANLSVETLERG------LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~------~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~ 394 (473)
++||+|||+++.+..+ .....+||++|+|||.+... .|+..+|+|++|||+|-|+.|.+||.-.....+...+
T Consensus 161 ~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~I 240 (411)
T KOG0599|consen 161 NIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMI 240 (411)
T ss_pred ceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Confidence 9999999999988655 45677999999999998543 4788999999999999999999999754433333333
Q ss_pred hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....- .+...-..+.+.+..+||.+||+.||.+|.|++|+|..
T Consensus 241 meGky--------------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 241 MEGKY--------------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred Hhccc--------------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 21110 01111245778899999999999999999999999864
No 79
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.8e-40 Score=320.70 Aligned_cols=263 Identities=22% Similarity=0.381 Sum_probs=205.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|.+.+.||+|+||.||++...+.........++++.+.. .......+.+|++++.+++|+||+++++++... +.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG--DP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC--Cc
Confidence 357888899999999999999753321111122233344332 334456799999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRS----------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~ 322 (473)
.++||||+++++|.+++.... ....+++..+..++.|++.||+|||+++ ++||||||+|||++.++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 999999999999999986432 1235899999999999999999999999 999999999999999999
Q ss_pred EEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhc
Q 011995 323 AKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWS 397 (473)
Q Consensus 323 vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 397 (473)
+||+|||++........ ....++..|+|||.+.+..++.++|||||||++|||++ |..||...........+...
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~ 238 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 238 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999876543321 22234678999999998889999999999999999998 99999776543322222110
Q ss_pred ccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 398 RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
.. . ..+...+.++.+|+.+||+.||.+|||+.++++.|+++...
T Consensus 239 ~~-------------~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 239 RV-------------L----QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred Cc-------------C----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 00 0 01223456799999999999999999999999999998754
No 80
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.1e-40 Score=320.20 Aligned_cols=261 Identities=23% Similarity=0.397 Sum_probs=204.0
Q ss_pred ccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
+|+..+.||+|+||.||+|...... .....+++++............+.+|+.+++.++||||+++++++... +..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD--GPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--CCc
Confidence 4777899999999999999864321 122334444433333334456789999999999999999999998765 778
Q ss_pred EEEEEeccCCChhhhhhcCC---------------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRS---------------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFST 312 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp 312 (473)
++|+||+.+|+|.+++.... ....+++..+..++.|++.||.|||+.+ |+||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhh
Confidence 99999999999999885421 1235889999999999999999999998 99999999
Q ss_pred CceeeCCCCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCCh
Q 011995 313 ANIQIDKDFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHP 387 (473)
Q Consensus 313 ~NILl~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~ 387 (473)
+|||++.++.+||+|||+++...... .....++..|+|||.+.+..++.++||||||+++|||++ |..||.+...
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99999999999999999987653221 122244578999999988889999999999999999998 9999977654
Q ss_pred HHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 388 KEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
......+.. . .....+...+.++.+|+.+||+.||.+||++.++++.|+++..+
T Consensus 236 ~~~~~~~~~-------~----------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 236 ERLFNLLKT-------G----------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred HHHHHHHhC-------C----------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 432222110 0 00111334557899999999999999999999999999988654
No 81
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.4e-40 Score=325.25 Aligned_cols=266 Identities=17% Similarity=0.219 Sum_probs=196.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|.... ..+.+++|+............+.+|+.+++.++||||+++++++.+. +..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKV---NGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTK--ETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECC---CCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecC--CeE
Confidence 4689999999999999999998543 34555666655443333445678999999999999999999998766 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+. ++|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 79 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 152 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARA 152 (303)
T ss_pred EEEEECCC-cCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCccee
Confidence 99999995 6888877542 345889999999999999999999999 99999999999999999999999999875
Q ss_pred cCCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH-HHhHhhhccccccccc----
Q 011995 334 IPET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE-ERNLVKWSRPFLADDC---- 405 (473)
Q Consensus 334 ~~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~---- 405 (473)
.... ......+++.|+|||++.+ ..++.++|||||||++|||++|..||.+..... ....+.+.........
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 153 KSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred ccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccch
Confidence 4322 2234567899999999865 457899999999999999999999998754322 1111111000000000
Q ss_pred ---------ccccccccccCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 ---------RLSLIMDPQLKGRF-PLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 ---------~~~~~~~~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.........+...+ ....+..+.+|+.+||+.||.+|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000000000000 0012357889999999999999999999986
No 82
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.2e-40 Score=322.42 Aligned_cols=261 Identities=21% Similarity=0.377 Sum_probs=207.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|+..+.||+|+||.||++...+.. .....++++.............+.+|++++.++ +|+||+++++++..+
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~-- 88 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE-- 88 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC--
Confidence 456888899999999999999875432 233445555544433444556789999999999 899999999998765
Q ss_pred CceEEEEEeccCCChhhhhhcC-------------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee
Q 011995 251 DQRMLIYERLFHGSLDRLIYGR-------------SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI 317 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl 317 (473)
+..++||||+++|+|.+++... .....+++..++.++.|++.||.|||+.+ |+||||||+|||+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence 6899999999999999998642 22456899999999999999999999998 9999999999999
Q ss_pred CCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHh
Q 011995 318 DKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERN 392 (473)
Q Consensus 318 ~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~ 392 (473)
+.++.+||+|||++........ ....++..|+|||++.+..++.++|||||||++|||++ |..||......+...
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 245 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence 9999999999999987644322 11233467999999988889999999999999999997 999998765444332
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
.+... .....+..++..+.+|+.+||..||++|||+.++++.|+.+-
T Consensus 246 ~~~~~-----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 246 LLKEG-----------------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHcC-----------------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 22100 001123345678999999999999999999999999998763
No 83
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9.3e-41 Score=331.60 Aligned_cols=242 Identities=17% Similarity=0.247 Sum_probs=194.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
+.||+|+||.||++.... .++.+++|+.... ........+.+|++++..++||||+++++++... +..|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~--~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKA---TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--DRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC--CEEEEEEe
Confidence 469999999999998543 3455566655432 1233456778899999999999999999988766 78999999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~ 337 (473)
|+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||++......
T Consensus 76 ~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~ 149 (325)
T cd05594 76 YANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 149 (325)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCC
Confidence 9999999988843 3468999999999999999999997 67 999999999999999999999999998754322
Q ss_pred --CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 338 --DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 338 --~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
......+|+.|+|||++.+..++.++|||||||++|||++|..||...........+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~----------------- 212 (325)
T cd05594 150 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE----------------- 212 (325)
T ss_pred CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC-----------------
Confidence 2234568999999999999899999999999999999999999998765443332221110
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
..++...+.++.+|+.+||+.||.+|+ ++.++++.
T Consensus 213 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 213 -IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred -CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 012334567899999999999999997 89999864
No 84
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.4e-40 Score=320.94 Aligned_cols=269 Identities=17% Similarity=0.226 Sum_probs=197.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhC---CCCCcccceeeeecC--
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASL---QHPNLCKLLGFHARD-- 248 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~~~-- 248 (473)
++|+..+.||+|+||.||+|..... .+..+++|+.+.... ......+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~ 78 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 78 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCC--CCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC
Confidence 3688889999999999999985322 223445555544322 22334567788777766 699999999988532
Q ss_pred -CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 249 -GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 249 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
....+++||||+. ++|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|
T Consensus 79 ~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 79 DRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CCCCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcc
Confidence 2356899999996 6899988653 2345899999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh-hhccccccccc
Q 011995 328 YGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV-KWSRPFLADDC 405 (473)
Q Consensus 328 FGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 405 (473)
||++....... .....+++.|+|||.+.+..++.++|||||||++|||++|.+||.+....+....+ ...........
T Consensus 154 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 154 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred ccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 99997664332 23456789999999998888999999999999999999999999876654433222 11110000000
Q ss_pred cc-----ccccccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 RL-----SLIMDPQLK---GRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 ~~-----~~~~~~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.. ......... ..+....+..+.+++.+||+.||++|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00 000000000 0011235677889999999999999999999985
No 85
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.3e-40 Score=315.60 Aligned_cols=259 Identities=20% Similarity=0.380 Sum_probs=204.4
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC----C
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS----D 251 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~----~ 251 (473)
|.+.+.||+|+||.||+|.+..+....+.++++...... .......+.+|+++++.++|+||+++++++..... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456789999999999999976655445566666655432 23445688999999999999999999998865421 2
Q ss_pred ceEEEEEeccCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 252 QRMLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
..++||||+++|+|..++.... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 4799999999999998885432 2246899999999999999999999998 999999999999999999999999
Q ss_pred CCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccc
Q 011995 329 GCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 329 Gla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
|+++....... .....+..|++||.+.+..++.++|||||||++|||++ |..||...........+. .
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~-------~ 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLR-------H 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-------c
Confidence 99986643321 11234568999999988889999999999999999999 999997655433222111 0
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
+. ....+..++..+.+++.+||+.||.+||++.+|++.|+++
T Consensus 231 ~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GN----------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC----------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0112344567899999999999999999999999999876
No 86
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-40 Score=326.72 Aligned_cols=260 Identities=21% Similarity=0.387 Sum_probs=210.7
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
..+.++||+|-||.|..+.... ..++|+|..+-........+|.+|+++|.+++|||||.|+|+|..+ +.+++|
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg----~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D--ePicmI 613 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEG----PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD--DPLCMI 613 (807)
T ss_pred eehhhhhcCcccceeEEEEecC----ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC--CchHHH
Confidence 3445999999999999997654 3455555555555666778999999999999999999999999988 889999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
+|||++|+|.+++..... +.+.-....+|+.||+.||+||.+-+ +|||||.+.|+|+|.++++||+|||+++.+..
T Consensus 614 ~EYmEnGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHHhcCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCccccccccc
Confidence 999999999999976432 23455667789999999999999999 99999999999999999999999999998877
Q ss_pred CCccCcc----cccccCChhhhhcCCCCCcCCchHHHHHHHHHHc--CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 337 TDISNSS----VAAANLSVETLERGLLTPKSNVWSFGIVLLELLT--GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 337 ~~~~~~~----~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.++.... ..+.|||+|.+.-++++.++|||+||+++||+++ .+.||......+. ++-...+..+......
T Consensus 690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v---ven~~~~~~~~~~~~~- 765 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV---VENAGEFFRDQGRQVV- 765 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH---HHhhhhhcCCCCccee-
Confidence 7665443 4589999999999999999999999999999864 7889976654432 2222223332222111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
...|.-++..+.+++.+||..|-++||+++++...|++..
T Consensus 766 ------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 766 ------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred ------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 1225567788999999999999999999999999998653
No 87
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.8e-40 Score=330.53 Aligned_cols=254 Identities=20% Similarity=0.249 Sum_probs=198.6
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC---CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
+|++.+.||+|+||.||++....+....+.+++|+.... ......+.+..|+.++..+ +|+||+++++++..+ +
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~--~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE--A 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC--C
Confidence 578889999999999999986555555666777766432 1233446688999999999 599999999888765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~ 152 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLS 152 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCC
Confidence 89999999999999999854 345899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC---ccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 332 GHIPETD---ISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 332 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
+...... .....+|+.|+|||++.+.. ++.++|||||||++|||++|..||...........+.. ...
T Consensus 153 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~--~~~------ 224 (332)
T cd05614 153 KEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR--RIL------ 224 (332)
T ss_pred ccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH--HHh------
Confidence 7653321 22446899999999997654 78999999999999999999999965332111110100 000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
..++ .++...+..+.+++.+||+.||++|| +++++++.
T Consensus 225 --~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 225 --KCDP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred --cCCC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 0111 22344567889999999999999999 77788754
No 88
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=346.15 Aligned_cols=262 Identities=17% Similarity=0.232 Sum_probs=210.2
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceee-eec---
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGF-HAR--- 247 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~-~~~--- 247 (473)
...++++.+.|.+|||+.||.|...... +.+++|..... .+...+.+++||++|+.|. |+|||.+++. ...
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~---~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGG---KKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCC---ceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 3467788899999999999999865443 56666665555 6778889999999999995 9999999993 222
Q ss_pred CC-CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 248 DG-SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 248 ~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
.+ .-+++|+||||.+|+|-|++..+.. ..|++.++++|+.++++|+++||...+ +|||||||-+||||+.++..|||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq-~~lte~eVLkIf~dv~~AVa~mH~~~p-PiIHRDLKiENvLls~~g~~KLC 188 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQ-TRLTEDEVLKIFYDVCEAVAAMHYLKP-PIIHRDLKIENVLLSADGNYKLC 188 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHh-ccCChHHHHHHHHHHHHHHHHHhcCCC-ccchhhhhhhheEEcCCCCEEeC
Confidence 11 2468899999999999999976543 349999999999999999999999975 59999999999999999999999
Q ss_pred ccCCCcccCCCCc-----------cCcccccccCChhhh---hcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh
Q 011995 327 GYGCAGHIPETDI-----------SNSSVAAANLSVETL---ERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN 392 (473)
Q Consensus 327 DFGla~~~~~~~~-----------~~~~~t~~y~aPE~~---~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~ 392 (473)
|||.++....... -....|+.|++||++ .+...++|+|||+|||+||-|+....||+......
T Consensus 189 DFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la--- 265 (738)
T KOG1989|consen 189 DFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA--- 265 (738)
T ss_pred cccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee---
Confidence 9999865422110 122458999999987 45678999999999999999999999998643211
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccC
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
|++....-.-....+..+.+||..||+.||.+||++-+++..+-+|.....
T Consensus 266 -----------------Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 266 -----------------ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred -----------------EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 122222111124788999999999999999999999999999998876543
No 89
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-42 Score=308.81 Aligned_cols=253 Identities=17% Similarity=0.241 Sum_probs=207.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|++...||+|.|+.||++. +..++..++++++..+. ...+.+.+.+|+.|-+.++|||||+|++-+..+ ..
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~---~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~--~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCV---HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE--SF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHH---hccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc--ce
Confidence 4567777899999999999998 45566666666665542 455788999999999999999999999987665 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---CcEEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---FSAKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~~vkl~DFG 329 (473)
.|||+|+|.|++|..-|-.+ .-+++..+-..+.||+.+|.|+|.++ |||||+||+|+|+... .-+||+|||
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FG 158 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFG 158 (355)
T ss_pred eEEEEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccc
Confidence 99999999999997666433 34688888999999999999999999 9999999999999533 459999999
Q ss_pred CCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 330 CAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 330 la~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
+|..+... ......||++|||||++....|+..+|||+.|||||-|+.|.+||.+.......+.+....
T Consensus 159 vAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~---------- 228 (355)
T KOG0033|consen 159 LAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA---------- 228 (355)
T ss_pred eEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc----------
Confidence 99887643 3456789999999999999999999999999999999999999999866555444332111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
-...+....++++++++|+.+||..||.+|.|+.|.|+.
T Consensus 229 ----yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 229 ----YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred ----cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 011222345788999999999999999999999998754
No 90
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=6.9e-40 Score=341.12 Aligned_cols=270 Identities=14% Similarity=0.176 Sum_probs=196.0
Q ss_pred HHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCC------CCccc
Q 011995 167 LDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH------PNLCK 240 (473)
Q Consensus 167 ~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~H------pnIv~ 240 (473)
.+++...+++|.+.+.||+|+||+||+|.... ..+.+++|+.+.. ......+..|++++..++| .+++.
T Consensus 121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~---~~~~vAvK~i~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~ 195 (467)
T PTZ00284 121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDRK---RKEYCAVKIVRNV--PKYTRDAKIEIQFMEKVRQADPADRFPLMK 195 (467)
T ss_pred CCccccCCCcEEEEEEEEeccCEEEEEEEEcC---CCeEEEEEEEecc--hhhHHHHHHHHHHHHHHhhcCcccCcceee
Confidence 34555567899999999999999999998543 3345556655422 2233456677777777754 45888
Q ss_pred ceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCC
Q 011995 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 241 l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~ 319 (473)
+++++..+ ...+|+|||++ +++|.+++.. ...+++..+..|+.||+.||.|||++ + ||||||||+|||++.
T Consensus 196 i~~~~~~~-~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~ 267 (467)
T PTZ00284 196 IQRYFQNE-TGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMET 267 (467)
T ss_pred eEEEEEcC-CceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEec
Confidence 88888754 36789999988 7789888854 34699999999999999999999984 7 999999999999987
Q ss_pred CC----------------cEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCC
Q 011995 320 DF----------------SAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLD 383 (473)
Q Consensus 320 ~~----------------~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~ 383 (473)
++ .+||+|||++.... .......+|+.|+|||++.+..++.++|||||||++|||++|++||.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~-~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDER-HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred CCcccccccccccCCCCceEEECCCCccccCc-cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 65 49999999876432 22345678999999999999999999999999999999999999998
Q ss_pred CCChHHHHhHhhhccccccccc-------cccccc------ccccCC----------CC-CHHHHHHHHHHHHHhcccCC
Q 011995 384 SRHPKEERNLVKWSRPFLADDC-------RLSLIM------DPQLKG----------RF-PLKAARTVADIALRCLQKEP 439 (473)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~------~~~l~~----------~~-~~~~~~~l~~li~~cl~~dP 439 (473)
+....+....+......+.... ....+. .+.... .. .......+.+||.+||++||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 7765544433321110000000 000000 000000 00 01124567899999999999
Q ss_pred CCCCCHHHHHH
Q 011995 440 SERPTMRSIFE 450 (473)
Q Consensus 440 ~~RPt~~eil~ 450 (473)
.+|||++|+|+
T Consensus 427 ~~R~ta~e~L~ 437 (467)
T PTZ00284 427 QKRLNARQMTT 437 (467)
T ss_pred hhCCCHHHHhc
Confidence 99999999997
No 91
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.2e-39 Score=316.29 Aligned_cols=259 Identities=20% Similarity=0.345 Sum_probs=205.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||+||+|.+..+.. ....+++|+............+.+|+.++..++|+||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~~ 83 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---STV 83 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC---CCc
Confidence 567888999999999999998644332 2334566665544455556788999999999999999999999864 457
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++++||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 84 QLVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceee
Confidence 8999999999999998542 346899999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
...... ....++..|++||.+.+..++.++|||||||++|||++ |..||...........+.. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-------~~~-- 229 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-------GER-- 229 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-------CCc--
Confidence 643221 12234568999999988889999999999999999998 9999976544332222210 000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...+...+.++.+++.+||..||++||++.++++.|+++...
T Consensus 230 --------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 230 --------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred --------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 011234557889999999999999999999999999887543
No 92
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.3e-40 Score=344.02 Aligned_cols=250 Identities=22% Similarity=0.285 Sum_probs=199.5
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
.|...+.||+|+||.||+|....+. ...+++|+.... .......+.+|+.+|..++|||||++++++... +.+||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~--~~~vv~K~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~--~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDP--KEKVVAKFVMLN-DERQAAYARSELHCLAACDHFGIVKHFDDFKSD--DKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCC--CeEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC--CEEEE
Confidence 3888899999999999999854331 233334333222 333445678899999999999999999999876 78999
Q ss_pred EEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 256 IYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
||||+++|+|.+++... .....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..+
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence 99999999999988542 22456899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+....+....
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~------------ 287 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGK------------ 287 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------------
Confidence 4322 234468999999999998889999999999999999999999998765443322221110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...++..++.++.+||.+||..||++||++.+++.
T Consensus 288 -----~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 288 -----YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -----CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 00123345678999999999999999999999875
No 93
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=8.1e-40 Score=315.26 Aligned_cols=258 Identities=18% Similarity=0.327 Sum_probs=203.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|...+.||+|+||.||+|....+......++++.............+..|++++..++|+||+++++++... +..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 81 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--KPA 81 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC--CCc
Confidence 457888899999999999999976443333344455444333344567789999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++..
T Consensus 82 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 82 MIITEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred EEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCcccee
Confidence 9999999999999998542 356899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCCccC-----cccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 334 IPETDISN-----SSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 334 ~~~~~~~~-----~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
........ ...+..|++||++.+..++.++|||||||++|||++ |..||...........+.. .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~-------~--- 226 (268)
T cd05063 157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND-------G--- 226 (268)
T ss_pred cccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc-------C---
Confidence 54322111 122357999999988889999999999999999997 9999976544332221110 0
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
.....+..++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 227 -------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 -------FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00011223457889999999999999999999999999876
No 94
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.8e-40 Score=335.21 Aligned_cols=261 Identities=19% Similarity=0.290 Sum_probs=203.9
Q ss_pred cccccCcceeecCCceEEEEEECCC--CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSD 251 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~ 251 (473)
++|...+.||+|+||.||+|++.+. ....+.+++|+............+.+|+.+|.++. |||||++++++... .
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~--~ 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG--G 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC--C
Confidence 3566669999999999999997642 22344556665554333444567899999999997 99999999999776 6
Q ss_pred ceEEEEEeccCCChhhhhhcCCC---------------------------------------------------------
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSD--------------------------------------------------------- 274 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~--------------------------------------------------------- 274 (473)
..++||||+.+|+|.++++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 89999999999999999965321
Q ss_pred --------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCcee
Q 011995 275 --------------------------------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQ 316 (473)
Q Consensus 275 --------------------------------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NIL 316 (473)
...+++..+..++.|++.||+|||+.+ |+||||||+|||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEE
Confidence 124678889999999999999999998 999999999999
Q ss_pred eCCCCcEEEeccCCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHH
Q 011995 317 IDKDFSAKLSGYGCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEER 391 (473)
Q Consensus 317 l~~~~~vkl~DFGla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~ 391 (473)
++.++.+||+|||+++...... .....++..|+|||.+.+..++.++|||||||++|||++ |..||......+..
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~ 351 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF 351 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence 9999999999999997653221 122345678999999988889999999999999999998 89999765433321
Q ss_pred hHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 392 NLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
.... ..+ .....+..++.++.+|+.+||..+|.+||++.+|++.|+++.
T Consensus 352 ~~~~------~~~----------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 YNAI------KRG----------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHH------HcC----------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1110 000 011123345688999999999999999999999999999763
No 95
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=8.4e-40 Score=317.07 Aligned_cols=259 Identities=19% Similarity=0.315 Sum_probs=201.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
+++|.+.+.||+|+||.||+|.+.+.. .....++++.............|.+|+.+++.++|+||+++++++.+. +
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER--L 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--C
Confidence 467888899999999999999875421 123333344333333344456789999999999999999999988765 6
Q ss_pred ceEEEEEeccCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC---cEE
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSD----GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF---SAK 324 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~---~vk 324 (473)
..++||||+++++|.+++..... ...+++..+..++.||+.||+|||+.+ ++|+||||+|||++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceE
Confidence 78999999999999999865421 235899999999999999999999999 99999999999998654 599
Q ss_pred EeccCCCcccCCCCcc----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccc
Q 011995 325 LSGYGCAGHIPETDIS----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 325 l~DFGla~~~~~~~~~----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|+|||+++........ ....+..|+|||++.+..++.++|||||||++|||++ |..||...........+...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-- 237 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG-- 237 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC--
Confidence 9999999876432221 1223467999999998899999999999999999997 99999876544332222100
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
....++..++..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 238 ---------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 238 ---------------GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred ---------------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 0111233456789999999999999999999999999863
No 96
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.1e-40 Score=328.77 Aligned_cols=263 Identities=20% Similarity=0.325 Sum_probs=204.1
Q ss_pred cccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
++|++.+.||+|+||.||+|...+ .....+.+++|+.+..........+.+|+.++.++ +|+||+++++++...+ .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-~ 85 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-G 85 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC-C
Confidence 478888999999999999998532 23345666676665443444556788999999999 7899999999886553 5
Q ss_pred ceEEEEEeccCCChhhhhhcCCC---------------------------------------------------------
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSD--------------------------------------------------------- 274 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~--------------------------------------------------------- 274 (473)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 78999999999999999864210
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCc----cCcc
Q 011995 275 -------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI----SNSS 343 (473)
Q Consensus 275 -------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~----~~~~ 343 (473)
...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........ ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 124788899999999999999999999 99999999999999999999999999876532211 1223
Q ss_pred cccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHH
Q 011995 344 VAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLK 422 (473)
Q Consensus 344 ~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 422 (473)
++..|+|||.+.+..++.++|||||||++|||++ |..||............ +..+.. ...+..
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~------~~~~~~----------~~~~~~ 306 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR------LKEGTR----------MRAPDY 306 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH------HhccCC----------CCCCCC
Confidence 4567999999988889999999999999999996 99999764332211110 000000 011222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 423 AARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 423 ~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
.+.++.+++..||+.||.+|||+.+|++.|+.+.+
T Consensus 307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 44678999999999999999999999999998765
No 97
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.9e-40 Score=317.65 Aligned_cols=259 Identities=21% Similarity=0.349 Sum_probs=205.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|...+.||+|+||.||+|...+.. ...+.++++.............+.+|+.++..++|+||+++++++... .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~ 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG--Q 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC--C
Confidence 357888899999999999999875433 233455555543333334456788999999999999999999998765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEE
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSD-------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEE
Confidence 89999999999999999865321 234789999999999999999999998 99999999999999999999
Q ss_pred EeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccc
Q 011995 325 LSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 325 l~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|+|||+++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||...........+....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~- 238 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG- 238 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC-
Confidence 999999876543321 22345678999999988889999999999999999998 999997655444332221000
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
....+..++..+.+++.+||+.+|++|||+.++++.|++
T Consensus 239 ----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 239 ----------------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ----------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 001233346789999999999999999999999999863
No 98
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.5e-40 Score=335.15 Aligned_cols=250 Identities=18% Similarity=0.230 Sum_probs=198.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|+..+.||+|+||+||+|.... .++.+++|+..... .......+.+|+++|..++|+||+++++++.+. +.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~--~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKD---TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE--NY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--Ce
Confidence 478889999999999999998544 34455666655321 223446678999999999999999999998876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|+||||+.+|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 149 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred EEEEECCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccce
Confidence 9999999999999999854 346899999999999999999999999 9999999999999999999999999986
Q ss_pred ccCCCC----------------------------------------ccCcccccccCChhhhhcCCCCCcCCchHHHHHH
Q 011995 333 HIPETD----------------------------------------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVL 372 (473)
Q Consensus 333 ~~~~~~----------------------------------------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl 372 (473)
.+.... .....||+.|+|||++.+..++.++|||||||++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 229 (364)
T cd05599 150 GLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIM 229 (364)
T ss_pred eccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHH
Confidence 542211 0123589999999999988899999999999999
Q ss_pred HHHHcCCCCCCCCChHHHHhHh-hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHH
Q 011995 373 LELLTGRKNLDSRHPKEERNLV-KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---MRSI 448 (473)
Q Consensus 373 ~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~ei 448 (473)
|||++|..||......+....+ .|.... ... .....+.++.+++.+|+. +|.+|++ +.++
T Consensus 230 ~el~~G~~Pf~~~~~~~~~~~i~~~~~~~-------------~~~--~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l 293 (364)
T cd05599 230 YEMLVGYPPFCSDNPQETYRKIINWKETL-------------QFP--DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI 293 (364)
T ss_pred HHhhcCCCCCCCCCHHHHHHHHHcCCCcc-------------CCC--CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH
Confidence 9999999999876654432222 221110 000 011346788999999996 9999998 8888
Q ss_pred HHH
Q 011995 449 FEE 451 (473)
Q Consensus 449 l~~ 451 (473)
++.
T Consensus 294 l~h 296 (364)
T cd05599 294 KSH 296 (364)
T ss_pred hcC
Confidence 773
No 99
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.6e-40 Score=321.72 Aligned_cols=260 Identities=18% Similarity=0.308 Sum_probs=204.3
Q ss_pred hcccccCcceeecCCceEEEEEECC--CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|...+.||+|+||.||++.... .......++++..+........+.+.+|+++++++ +|+||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG-- 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC--
Confidence 3578889999999999999997532 12234455555444333344456789999999999 799999999998766
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+..++||||+.+|+|.+++.... ...+++.++..++.|++.||.|||+++ |+|+||||+|||++.++.++|+|||+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcc
Confidence 78999999999999999996532 334899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccc
Q 011995 331 AGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 331 a~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
+........ ....++..|+|||.+.+..++.++|||||||++|||++ |..||.............. ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~------~~- 260 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK------EG- 260 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH------cC-
Confidence 876543221 12234578999999998889999999999999999998 9999976554332211100 00
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
.....+...+.++.+|+.+||..+|++|||+.+|++.|+++
T Consensus 261 ---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 ---------YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ---------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00011223457899999999999999999999999999875
No 100
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.7e-40 Score=322.28 Aligned_cols=262 Identities=21% Similarity=0.358 Sum_probs=207.0
Q ss_pred cccccCcceeecCCceEEEEEECCCC----eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDA----STSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG 249 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~ 249 (473)
++|.+.+.||+|+||.||++...+.. .....+++++............+.+|++++..+ +|+||+++++++...
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~- 96 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD- 96 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-
Confidence 57899999999999999999753321 123345555554333344556788999999999 899999999998766
Q ss_pred CCceEEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCcee
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQ 316 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NIL 316 (473)
+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+.+ ++||||||+|||
T Consensus 97 -~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nil 172 (307)
T cd05098 97 -GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL 172 (307)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheE
Confidence 789999999999999999965321 235899999999999999999999998 999999999999
Q ss_pred eCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHH
Q 011995 317 IDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEER 391 (473)
Q Consensus 317 l~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~ 391 (473)
++.++.+||+|||++........ .....+..|+|||.+.+..++.++|||||||++|||++ |..||......+..
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~ 252 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 252 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 99999999999999876543221 11223468999999998889999999999999999998 88999765543322
Q ss_pred hHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 392 NLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
..+.... ....+...+.++.+++.+||..+|.+||++.+|++.|+++...
T Consensus 253 ~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 253 KLLKEGH-----------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHcCC-----------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 2221100 0112334567899999999999999999999999999998754
No 101
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.3e-40 Score=334.85 Aligned_cols=250 Identities=18% Similarity=0.198 Sum_probs=196.7
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.|+..+.||+|+||+||+|.... +.+.+++|+..... .......+.+|++++..++|+||+++++++.+. +.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~--~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVD---THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK--DNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC--CEE
Confidence 57888999999999999998544 34556666655432 233456789999999999999999999999865 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||..+ |+||||||+||||+.++.+||+|||++..
T Consensus 77 ~lv~E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~ 150 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTG 150 (381)
T ss_pred EEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence 999999999999999854 346889999999999999999999999 99999999999999999999999998753
Q ss_pred cCCC-------------------------------------------------CccCcccccccCChhhhhcCCCCCcCC
Q 011995 334 IPET-------------------------------------------------DISNSSVAAANLSVETLERGLLTPKSN 364 (473)
Q Consensus 334 ~~~~-------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~s~~sD 364 (473)
+... ......||+.|+|||++.+..++.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D 230 (381)
T cd05626 151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCD 230 (381)
T ss_pred cccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccc
Confidence 3100 011346889999999999888999999
Q ss_pred chHHHHHHHHHHcCCCCCCCCChHHHHh-HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHH--hcccCCCC
Q 011995 365 VWSFGIVLLELLTGRKNLDSRHPKEERN-LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALR--CLQKEPSE 441 (473)
Q Consensus 365 vwSlGvvl~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~--cl~~dP~~ 441 (473)
||||||++|||++|..||......+... ++.|.... ........+.++.+|+.+ |+..++..
T Consensus 231 iwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------~~~~~~~~s~~~~dli~~ll~~~~~~~~ 295 (381)
T cd05626 231 WWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTL---------------HIPPQVKLSPEAVDLITKLCCSAEERLG 295 (381)
T ss_pred eeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccccc---------------CCCCCCCCCHHHHHHHHHHccCcccccC
Confidence 9999999999999999998765443222 22221110 000012356788899988 55666777
Q ss_pred CCCHHHHHHH
Q 011995 442 RPTMRSIFEE 451 (473)
Q Consensus 442 RPt~~eil~~ 451 (473)
|+++.+|++.
T Consensus 296 R~~~~~~l~h 305 (381)
T cd05626 296 RNGADDIKAH 305 (381)
T ss_pred CCCHHHHhcC
Confidence 9999999875
No 102
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.2e-39 Score=312.77 Aligned_cols=254 Identities=20% Similarity=0.370 Sum_probs=195.5
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+.||+|+||.||+|.+.+.......+++|.............+.+|+.+++.++||||+++++++...+ ...++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE-GSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC-CCcEEEEecC
Confidence 468999999999998755443334444544332223344678889999999999999999999876543 5678999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC--
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD-- 338 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~-- 338 (473)
.+|+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 80 KHGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 999999999643 334678888999999999999999998 9999999999999999999999999987553321
Q ss_pred ----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 339 ----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 339 ----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
.....++..|+|||.+.+..++.++|||||||++|||++ |.+||...........+.... ..
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 221 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR-------------RL 221 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-------------CC
Confidence 112344668999999988889999999999999999999 566776544333222111100 00
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
..+...+..+.+++.+||..+|++||++.+|++.|+++..
T Consensus 222 ----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 222 ----LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0122335678999999999999999999999999998753
No 103
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-39 Score=316.08 Aligned_cols=264 Identities=21% Similarity=0.362 Sum_probs=208.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCC-eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDA-STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|...+.||+|+||.||+|.+.+.. .....++++.............+.+|+.+++.++|+||+++++++...+ ..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG-EP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-CC
Confidence 467888899999999999999976522 1233344444333333445677899999999999999999999887643 67
Q ss_pred eEEEEEeccCCChhhhhhcCCCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDG-----PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
.++++||+++|+|.+++...... ..+++..+..++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence 89999999999999998653222 56899999999999999999999998 99999999999999999999999
Q ss_pred cCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccc
Q 011995 328 YGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 328 FGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
||+++.+..... ....++..|+|||++.+..++.++|||||||++||+++ |+.||...........+.
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~------- 233 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK------- 233 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHH-------
Confidence 999986543321 12234567999999988889999999999999999999 999998765433222111
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
.+... ..+..++.++.+++.+||..||++|||+.++++.|+.+.++
T Consensus 234 ~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 234 DGYRL----------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred cCCCC----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 11000 11223457889999999999999999999999999988754
No 104
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=8.1e-40 Score=312.37 Aligned_cols=247 Identities=19% Similarity=0.371 Sum_probs=195.1
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+.||+|+||.||+|....+ .+.++++.............+.+|+++++.++|+||+++++++... ...++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRAD---NTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecC---CceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--CCeEEEEeec
Confidence 3699999999999986543 2334444433223344557799999999999999999999998765 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCcc
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIS 340 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 340 (473)
++++|.+++... ...+++..+..++.|++.||.|||+++ |+|+||||+|||++.++.+||+|||++.........
T Consensus 76 ~~~~L~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 150 (252)
T cd05084 76 QGGDFLTFLRTE--GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA 150 (252)
T ss_pred cCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCccccccccc
Confidence 999999998542 346899999999999999999999999 999999999999999999999999998765432211
Q ss_pred Cc----ccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 341 NS----SVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 341 ~~----~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
.. ..+..|+|||.+.++.++.++|||||||++|||++ |..||...........+... .
T Consensus 151 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~-----------------~ 213 (252)
T cd05084 151 STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG-----------------V 213 (252)
T ss_pred ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC-----------------C
Confidence 11 22356999999998889999999999999999997 99999765543322222110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
...++...+..+.+++.+||+.||++|||+.+|++.|++
T Consensus 214 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 214 RLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 111233456789999999999999999999999999863
No 105
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=8.1e-40 Score=313.89 Aligned_cols=255 Identities=23% Similarity=0.413 Sum_probs=204.1
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
...+|...+.||.|+||.||+|...++ +.+++++.... .......+.+|+.+++.++|+||+++++++... +.
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~----~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 76 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNR----VRVAIKILKSD-DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG--EP 76 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCC----CcEEEEecccc-chhhHHHHHHHHHHHhcCCCcchhheeeeEecC--CC
Confidence 356788889999999999999987653 22333333221 222456788999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++... .+..+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~ 152 (261)
T cd05148 77 VYIITELMEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLAR 152 (261)
T ss_pred eEEEEeecccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchh
Confidence 99999999999999999654 3456899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 333 HIPETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 333 ~~~~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....... ....++..|++||.+.+..++.++||||||+++|+|++ |+.||......+....+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~------------- 219 (261)
T cd05148 153 LIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITA------------- 219 (261)
T ss_pred hcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHh-------------
Confidence 6643321 12234568999999988889999999999999999998 8999977654333222210
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
......+..++..+.+++.+||+.||.+|||+.+|++.|+.+
T Consensus 220 ----~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 220 ----GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ----CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 001112345567899999999999999999999999999864
No 106
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-41 Score=332.84 Aligned_cols=260 Identities=19% Similarity=0.310 Sum_probs=222.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+....++||.|.||.||.|.|.....+ ++|+.++......++|+.|..+|+.++|||+|+|+|+|..+ ..+|
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslT-----vAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~E--pPFY 339 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLT-----VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE--PPFY 339 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeecccee-----eehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccC--CCeE
Confidence 3445568999999999999999876543 77778877778889999999999999999999999999876 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
||.|||..|+|.++|+... ..-++....++++.||..|++||..++ +|||||...|+|+.++-.|||+||||++++
T Consensus 340 IiTEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred EEEecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhh
Confidence 9999999999999997653 345777888999999999999999999 999999999999999999999999999999
Q ss_pred CCCCccCccc---ccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDISNSSV---AAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~~~~~~---t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
..+.++...| .+.|.|||-+....++.++|||+|||+|||+.| |..||.+.+..+...+.+ .+.+
T Consensus 416 tgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLE-------kgyR---- 484 (1157)
T KOG4278|consen 416 TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLE-------KGYR---- 484 (1157)
T ss_pred cCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHh-------cccc----
Confidence 8776655444 478999999999999999999999999999987 889999876555443332 2212
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCC
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSS 462 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~ 462 (473)
-+-|..|++.+.+|+..||+..|.+||+++||-+.|+.|.+..+.+
T Consensus 485 ------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSis 530 (1157)
T KOG4278|consen 485 ------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSIS 530 (1157)
T ss_pred ------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccccc
Confidence 2237788899999999999999999999999999999888766543
No 107
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=7.5e-40 Score=315.17 Aligned_cols=260 Identities=18% Similarity=0.229 Sum_probs=203.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|++.+.||+|+||.||+|+...+ .+.+++|..... ........+.+|+++++.++||||+++++++... +.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLD---RKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED--NE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCC---CCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC--Ce
Confidence 5788999999999999999986443 334445544322 2334456788999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.++|+||+++|+|.+++.... ....+++..+..++.|++.||.|||+++ ++|+||||+|||++.++.++|+|||++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~ 153 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccc
Confidence 899999999999998885322 2345889999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
........ ....++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~-~~~~~~----------~~ 222 (267)
T cd08228 154 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF-SLCQKI----------EQ 222 (267)
T ss_pred eeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH-HHHHHH----------hc
Confidence 77643321 234577899999999888899999999999999999999999965432111 111100 00
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
...+ .......+..+.+++.+||..+|++||++.+|++.|+++.
T Consensus 223 ~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 223 CDYP---PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCCC---CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0001 1112345678999999999999999999999999999764
No 108
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.9e-40 Score=332.20 Aligned_cols=251 Identities=16% Similarity=0.212 Sum_probs=196.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|+..+.||+|+||+||+|.... ..+.+++|+..... .......+.+|+.++..++|+||+++++++.+. ..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~--~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKD---TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK--LN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC--Ce
Confidence 478889999999999999998543 34556666655321 223346788999999999999999999988765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+||||||+++|+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 76 ~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred EEEEEcCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcc
Confidence 9999999999999999954 346899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC-------------------------------------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHH
Q 011995 333 HIPETD-------------------------------------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLEL 375 (473)
Q Consensus 333 ~~~~~~-------------------------------------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~el 375 (473)
.+.... ....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~el 229 (363)
T cd05628 150 GLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229 (363)
T ss_pred cccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHH
Confidence 542210 1234689999999999998999999999999999999
Q ss_pred HcCCCCCCCCChHHHHhHhh-hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcc--cCCCCCCCHHHHHHH
Q 011995 376 LTGRKNLDSRHPKEERNLVK-WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQ--KEPSERPTMRSIFEE 451 (473)
Q Consensus 376 ltG~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~--~dP~~RPt~~eil~~ 451 (473)
++|..||.+....+....+. |.... .+.. ....+.++.+++.+++. .++..||+++||++.
T Consensus 230 l~G~~Pf~~~~~~~~~~~i~~~~~~~-------------~~p~--~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 230 LIGYPPFCSETPQETYKKVMNWKETL-------------IFPP--EVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HhCCCCCCCCCHHHHHHHHHcCcCcc-------------cCCC--cCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 99999998766544333221 11100 0000 11245678888887553 344456899999886
No 109
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.8e-40 Score=327.12 Aligned_cols=245 Identities=19% Similarity=0.285 Sum_probs=193.3
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHH---HhCCCCCcccceeeeecCCCC
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTL---ASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l---~~l~HpnIv~l~g~~~~~~~~ 251 (473)
|.+.+.||+|+||.||+|....+ .+.+++|+..... .....+.+.+|+.++ ..++||||+++++++... +
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~--~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKT---GELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE--D 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC--C
Confidence 56678999999999999986443 3455566554321 222345566776655 566899999999998765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..|+||||+++|+|..++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~ 148 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLC 148 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCC
Confidence 89999999999999988842 35999999999999999999999999 999999999999999999999999998
Q ss_pred cccCC--CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPE--TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
..... .......+++.|||||.+.+..++.++|||||||++|||++|..||...........+....
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~----------- 217 (324)
T cd05589 149 KEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE----------- 217 (324)
T ss_pred ccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------
Confidence 75422 22234568899999999998889999999999999999999999998765443332221110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
..++...+..+.+++.+||+.||.+|| ++.++++.
T Consensus 218 -------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 218 -------VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred -------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 012344567889999999999999999 57777663
No 110
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.4e-40 Score=333.42 Aligned_cols=250 Identities=19% Similarity=0.261 Sum_probs=201.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||+|.... ..+.+++|+..... .......+.+|++++..++|+||+++++++.++ +.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKD---TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE--EH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECC---CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC--Ce
Confidence 468889999999999999998653 34555666654321 223456788999999999999999999988765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~ 149 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCK 149 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCc
Confidence 99999999999999999543 46899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC-------------------------------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCC
Q 011995 333 HIPETD-------------------------------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKN 381 (473)
Q Consensus 333 ~~~~~~-------------------------------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p 381 (473)
...... .....+|+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~P 229 (350)
T cd05573 150 KMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP 229 (350)
T ss_pred cCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCC
Confidence 654332 2334678999999999999999999999999999999999999
Q ss_pred CCCCChHHHHhHh-hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 011995 382 LDSRHPKEERNLV-KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT-MRSIFEE 451 (473)
Q Consensus 382 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~eil~~ 451 (473)
|...........+ .|.... .+. ....++.++.+||.+||. ||.+||+ +.++++.
T Consensus 230 f~~~~~~~~~~~i~~~~~~~-------------~~p--~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 230 FYSDTLQETYNKIINWKESL-------------RFP--PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCCHHHHHHHHhccCCcc-------------cCC--CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 9876644433222 111100 000 011256889999999997 9999999 9999975
No 111
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.4e-40 Score=317.84 Aligned_cols=257 Identities=21% Similarity=0.313 Sum_probs=201.9
Q ss_pred ccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
+|...+.||+|+||.||+|...+.. ...+.+++|+............+.+|+.++..++||||+++++++... ...
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~~ 83 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE--QPL 83 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--Cce
Confidence 4556689999999999999875432 233445555544333333456788999999999999999999998766 678
Q ss_pred EEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 254 MLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
++++||+.+++|.+++.... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.+
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCC
Confidence 99999999999999985321 1235889999999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhh
Q 011995 321 FSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 395 (473)
+.+||+|||+++....... ....+++.|+|||.+.++.++.++|||||||++|||++ |..||.+....+....+.
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~ 240 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIR 240 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 9999999999876543221 22344678999999988889999999999999999998 888987765443322221
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.. . ...++..++..+.+|+.+||+.+|.+||++.+|+..|+.
T Consensus 241 ~~----------------~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 241 NR----------------Q-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred cC----------------C-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 10 0 011234556789999999999999999999999999874
No 112
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.4e-39 Score=313.69 Aligned_cols=257 Identities=18% Similarity=0.344 Sum_probs=202.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|.+.+.||+|+||.||+|...........++++.............+.+|+.++.+++||||+++++++..+ +..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--KPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC--CccE
Confidence 57888899999999999999864333333344444443333334457889999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ...+++.++..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++..+
T Consensus 82 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 82 IVTEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 999999999999999643 346899999999999999999999999 999999999999999999999999998866
Q ss_pred CCCCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 335 PETDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 335 ~~~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
..... .....+..|++||.+.+..++.++|+|||||++||+++ |..||......+....+. ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-------~~~~-- 227 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE-------EGYR-- 227 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh-------CCCc--
Confidence 43221 11122457999999998889999999999999999886 999997655433222111 0000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
...+..++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 228 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 --------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 011233457889999999999999999999999999875
No 113
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.6e-39 Score=318.22 Aligned_cols=265 Identities=19% Similarity=0.328 Sum_probs=200.8
Q ss_pred cccccCcceeecCCceEEEEEECCC-------------CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDD-------------ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKL 241 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l 241 (473)
++|++.+.||+|+||.||++...+. ......+++++............+.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 4688889999999999999864321 112233445544433344456789999999999999999999
Q ss_pred eeeeecCCCCceEEEEEeccCCChhhhhhcCCC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCC
Q 011995 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD--------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTA 313 (473)
Q Consensus 242 ~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~ 313 (473)
++++... +..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ ++|+||||+
T Consensus 85 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~ 159 (296)
T cd05095 85 LAVCITS--DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATR 159 (296)
T ss_pred EEEEecC--CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChh
Confidence 9998776 678999999999999999865321 234788899999999999999999999 999999999
Q ss_pred ceeeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc--CCCCCCCCCh
Q 011995 314 NIQIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT--GRKNLDSRHP 387 (473)
Q Consensus 314 NILl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt--G~~p~~~~~~ 387 (473)
|||++.++.++|+|||++..+..... .....+..|++||...++.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 99999999999999999876543321 12233578999999988889999999999999999998 7788876544
Q ss_pred HHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 388 KEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.+....... +...... .. ....+..++..+.+|+.+||+.||.+||++.+|++.|++
T Consensus 240 ~~~~~~~~~---~~~~~~~--~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQVIENTGE---FFRDQGR--QV-----YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHH---HHhhccc--cc-----cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 332211100 0000000 00 001122345789999999999999999999999999874
No 114
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.9e-40 Score=327.70 Aligned_cols=266 Identities=16% Similarity=0.229 Sum_probs=194.6
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC---C
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS---D 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~---~ 251 (473)
+|+..+.||+|+||.||+|....+ +..+++|..... ........+.+|+.+++.++||||+++++++..... .
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 77 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHT---GEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK 77 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCC---CCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCc
Confidence 477889999999999999985433 344555544322 122344678899999999999999999998864321 3
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 78 DIYVVFELME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred eEEEEEecCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccc
Confidence 5899999995 689988843 346899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC-----ccCcccccccCChhhhhc--CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc--cc--
Q 011995 332 GHIPETD-----ISNSSVAAANLSVETLER--GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR--PF-- 400 (473)
Q Consensus 332 ~~~~~~~-----~~~~~~t~~y~aPE~~~~--~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~--~~-- 400 (473)
+...... .....++..|+|||++.+ ..++.++|||||||++|||++|++||.+.........+.... +.
T Consensus 151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred cccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 7653221 123468899999999876 578999999999999999999999998765433222111000 00
Q ss_pred ----ccccc--ccccccccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 401 ----LADDC--RLSLIMDPQLKGRF---PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 401 ----~~~~~--~~~~~~~~~l~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.... .....+.......+ ....+..+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 00000000000000 01245678899999999999999999999975
No 115
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-39 Score=320.17 Aligned_cols=263 Identities=19% Similarity=0.341 Sum_probs=206.6
Q ss_pred hcccccCcceeecCCceEEEEEECC----CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGD----DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~ 248 (473)
.++|.+.+.||+|+||.||+|.... .......+++++............+.+|+.++..+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 4678888999999999999997532 12222344444443332344567899999999999 899999999998766
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCce
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI 315 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NI 315 (473)
...++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+++ |+||||||+||
T Consensus 94 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Ni 168 (304)
T cd05101 94 --GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNV 168 (304)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceE
Confidence 788999999999999999965321 235789999999999999999999999 99999999999
Q ss_pred eeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHH
Q 011995 316 QIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEE 390 (473)
Q Consensus 316 Ll~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~ 390 (473)
|++.++.+||+|||++........ ....++..|+|||++.+..++.++|||||||++|||++ |..||......+.
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 999999999999999986643221 12234568999999988889999999999999999998 8888876554443
Q ss_pred HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 391 RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...+.. ... ...+..++..+.+|+.+||+.+|.+||++.++++.|+++..-
T Consensus 249 ~~~~~~-------~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 249 FKLLKE-------GHR----------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHc-------CCc----------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 322210 000 011334567899999999999999999999999999987654
No 116
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.4e-40 Score=335.40 Aligned_cols=250 Identities=16% Similarity=0.202 Sum_probs=196.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||++.... ..+.+++|+..... .......+.+|++++..++|||||++++++.+. +.
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~--~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKD---TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA--QY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--Ce
Confidence 478888999999999999998543 34555666554321 233456788999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+||||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 76 ~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred eEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccc
Confidence 9999999999999999853 346889999999999999999999999 9999999999999999999999999986
Q ss_pred ccCCCC-------------------------------------------------ccCcccccccCChhhhhcCCCCCcC
Q 011995 333 HIPETD-------------------------------------------------ISNSSVAAANLSVETLERGLLTPKS 363 (473)
Q Consensus 333 ~~~~~~-------------------------------------------------~~~~~~t~~y~aPE~~~~~~~s~~s 363 (473)
.+.... .....||+.|+|||++.+..++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 229 (377)
T cd05629 150 GFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQEC 229 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCce
Confidence 331100 0023588999999999988899999
Q ss_pred CchHHHHHHHHHHcCCCCCCCCChHHHHhHh-hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 011995 364 NVWSFGIVLLELLTGRKNLDSRHPKEERNLV-KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER 442 (473)
Q Consensus 364 DvwSlGvvl~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~R 442 (473)
|||||||++|||++|..||......+....+ .|.... .+.. ....+.++.+|+.+||. +|.+|
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-------------~~p~--~~~~s~~~~dli~~lL~-~~~~r 293 (377)
T cd05629 230 DWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETL-------------YFPD--DIHLSVEAEDLIRRLIT-NAENR 293 (377)
T ss_pred eeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCcc-------------CCCC--CCCCCHHHHHHHHHHhc-CHhhc
Confidence 9999999999999999999876654332221 221100 0000 11345788999999997 67765
Q ss_pred ---CCHHHHHHH
Q 011995 443 ---PTMRSIFEE 451 (473)
Q Consensus 443 ---Pt~~eil~~ 451 (473)
+++.++++.
T Consensus 294 ~~r~~~~~~l~h 305 (377)
T cd05629 294 LGRGGAHEIKSH 305 (377)
T ss_pred CCCCCHHHHhcC
Confidence 599998875
No 117
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=9.8e-40 Score=319.62 Aligned_cols=265 Identities=18% Similarity=0.327 Sum_probs=199.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCe-----------eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCccccee
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAS-----------TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLG 243 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g 243 (473)
++|++.+.||+|+||.||++...+... ....+++|+.+..........|.+|++++.+++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 478888999999999999997643211 112344444443333444567999999999999999999999
Q ss_pred eeecCCCCceEEEEEeccCCChhhhhhcCC---------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCc
Q 011995 244 FHARDGSDQRMLIYERLFHGSLDRLIYGRS---------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTAN 314 (473)
Q Consensus 244 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~---------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~N 314 (473)
++... +..++||||+++++|.+++.... ....+++..++.++.|++.||+|||+.+ ++|+||||+|
T Consensus 85 ~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~N 159 (295)
T cd05097 85 VCVSD--DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRN 159 (295)
T ss_pred EEcCC--CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhh
Confidence 98765 78999999999999999985431 1124789999999999999999999999 9999999999
Q ss_pred eeeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc--CCCCCCCCChH
Q 011995 315 IQIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT--GRKNLDSRHPK 388 (473)
Q Consensus 315 ILl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt--G~~p~~~~~~~ 388 (473)
||++.++.+||+|||++........ ....++..|+|||.+.++.++.++|||||||++|||++ |..||......
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 9999999999999999876543221 12234568999999988889999999999999999988 66788765443
Q ss_pred HHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 389 EERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.....+.. +......... ...+...+..+.+|+.+||+.||++||++.+|++.|++
T Consensus 240 ~~~~~~~~---~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 QVIENTGE---FFRNQGRQIY-------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHH---hhhhcccccc-------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 32211110 0000000000 00122345789999999999999999999999999864
No 118
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.5e-39 Score=318.12 Aligned_cols=265 Identities=22% Similarity=0.378 Sum_probs=203.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCee-------------eeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAST-------------SKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKL 241 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l 241 (473)
.+|++.+.||+|+||.||+|...+.... ...+++++............+.+|++++.+++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 5788889999999999999987543221 133445544433344556789999999999999999999
Q ss_pred eeeeecCCCCceEEEEEeccCCChhhhhhcCC--------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCC
Q 011995 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRS--------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTA 313 (473)
Q Consensus 242 ~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~ 313 (473)
++++..+ +..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+++ |+|+||||+
T Consensus 85 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~ 159 (296)
T cd05051 85 LGVCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATR 159 (296)
T ss_pred EEEEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchh
Confidence 9998766 78999999999999999986532 1126899999999999999999999999 999999999
Q ss_pred ceeeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc--CCCCCCCCCh
Q 011995 314 NIQIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT--GRKNLDSRHP 387 (473)
Q Consensus 314 NILl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt--G~~p~~~~~~ 387 (473)
||+++.++.++|+|||++........ ....++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 99999999999999999876543322 22344678999999988889999999999999999998 7788866543
Q ss_pred HHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 388 KEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
....... ....... ........+..++.++.+++.+||+.||.+|||+.+|++.|++
T Consensus 240 ~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 QQVIENA---GHFFRDD-------GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHHHHH---Hhccccc-------cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 3321111 0010000 0000011123455789999999999999999999999998863
No 119
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-40 Score=316.03 Aligned_cols=249 Identities=21% Similarity=0.226 Sum_probs=204.1
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.|+..+.||.|.-|+||++.+.+.. ..+|+||+.... ......+...|-+||..+.||.++.||..+..+ ...
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~---~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~--~~~ 152 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTN---CLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD--KYS 152 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCC---ceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc--cee
Confidence 4455599999999999999976644 677888876542 334456778899999999999999999999877 899
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|||||||+||+|..+++.+ .+..|++..+..++.+|+.||+|||..| ||+|||||+||||.++|++.|+||.|+..
T Consensus 153 cl~meyCpGGdL~~LrqkQ-p~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~ 228 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQ-PGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLR 228 (459)
T ss_pred EEEEecCCCccHHHHHhhC-CCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeecccccc
Confidence 9999999999999988765 5778999999999999999999999999 99999999999999999999999998632
Q ss_pred cCC-----------------------------------C-----------------------CccCcccccccCChhhhh
Q 011995 334 IPE-----------------------------------T-----------------------DISNSSVAAANLSVETLE 355 (473)
Q Consensus 334 ~~~-----------------------------------~-----------------------~~~~~~~t~~y~aPE~~~ 355 (473)
+.. . .....+||-.|+|||++.
T Consensus 229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~ 308 (459)
T KOG0610|consen 229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR 308 (459)
T ss_pred CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence 210 0 012346788899999999
Q ss_pred cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhc
Q 011995 356 RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCL 435 (473)
Q Consensus 356 ~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl 435 (473)
|+.-+.++|+|.|||++|||+.|..||.+.+..+....|-. ..+.-.-...++..+++||+++|
T Consensus 309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~----------------~~l~Fp~~~~vs~~akDLIr~LL 372 (459)
T KOG0610|consen 309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG----------------QPLKFPEEPEVSSAAKDLIRKLL 372 (459)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc----------------CCCcCCCCCcchhHHHHHHHHHh
Confidence 99999999999999999999999999999887765543321 11111112367789999999999
Q ss_pred ccCCCCCCC----HHHHH
Q 011995 436 QKEPSERPT----MRSIF 449 (473)
Q Consensus 436 ~~dP~~RPt----~~eil 449 (473)
.+||.+|.. +.||-
T Consensus 373 vKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 373 VKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred ccChhhhhccccchHHhh
Confidence 999999998 55553
No 120
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.2e-39 Score=312.12 Aligned_cols=247 Identities=18% Similarity=0.339 Sum_probs=196.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
+|...+.||+|+||.||+|.+.+. ..+++|+. .........+.+|+++++.++|+||+++++++... +..++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~----~~~~iK~~--~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l 76 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGK----IDVAIKMI--REGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ--RPIFI 76 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCC----ccEEEEEe--ccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--CceEE
Confidence 477779999999999999986533 22334433 22223345788999999999999999999988765 78999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 77 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 77 VTEYMANGCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred EEecCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecc
Confidence 99999999999999643 236899999999999999999999999 9999999999999999999999999987664
Q ss_pred CCCccCc---ccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 336 ETDISNS---SVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 336 ~~~~~~~---~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
....... ..+..|+|||.+.+..++.++|||||||++|||++ |..||......+....+...
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-------------- 217 (256)
T cd05059 152 DDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-------------- 217 (256)
T ss_pred cccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC--------------
Confidence 3322222 22357999999998889999999999999999999 89999765443322211100
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
.....+...+..+.+++.+||..+|++|||+.++++.|
T Consensus 218 ---~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 218 ---YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 00111334567899999999999999999999999987
No 121
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=8e-40 Score=318.15 Aligned_cols=274 Identities=19% Similarity=0.259 Sum_probs=200.9
Q ss_pred cccccCcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.+|++.+.||+|+||.||++.+.. +......++++.... ......+.+.+|++++..++||||+++++++...+...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQH-STAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 467788999999999999998642 222344445554332 233445678999999999999999999998866555678
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 83 ~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccc
Confidence 9999999999999998542 345899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCcc-----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPETDIS-----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~~~-----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
....... ....+..|+|||.+.+..++.++|||||||++|||++|..++.......... .............+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 236 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRM-MGNDKQGQMIVYHLI 236 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhh-cccccccccchHHHH
Confidence 6433211 1122346999999988889999999999999999999887764332111000 000000000000000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
...........+..++.++.+|+.+||..+|++|||+.+|++.|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 ELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 01111111112334567899999999999999999999999999875
No 122
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.3e-39 Score=320.98 Aligned_cols=266 Identities=20% Similarity=0.303 Sum_probs=202.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|+||.||++..... ...++++............++.+|++++.+++||||+++++++..+ +.++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPS---GLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD--GEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCC---CeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC--CEEE
Confidence 4688899999999999999986543 3344454444333334456788999999999999999999999876 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+||||+++++|.+++... ..+++..+..++.|++.||.|||+. + ++|+||||+|||++.++.+||+|||++..
T Consensus 76 lv~ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQ 149 (308)
T ss_pred EEeeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccc
Confidence 999999999999999543 4689999999999999999999984 6 99999999999999999999999999876
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc-------
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR------- 406 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 406 (473)
..........++..|+|||.+.+..++.++|||||||++|||++|..||........................
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 150 LIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred ccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCC
Confidence 6544444557789999999998888999999999999999999999999765433222111110000000000
Q ss_pred -------------cccccccccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 407 -------------LSLIMDPQLKGRFP-LKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 407 -------------~~~~~~~~l~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
...+... .....+ ...+.++.+|+.+||..||++|||+.+|++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNE-PPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCCccchhhHHHHHHHHhcC-CCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000 000011 12456799999999999999999999999873
No 123
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.1e-39 Score=312.57 Aligned_cols=249 Identities=18% Similarity=0.328 Sum_probs=197.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|...+.||+|+||.||.|.+.+.. . ++++...........+.+|+.++..++||||+++++++... +..+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~----~--~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 75 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQY----D--VAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ--RPIY 75 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCC----c--EEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccC--CCcE
Confidence 35777899999999999999865432 1 33333333333456799999999999999999999998765 6789
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+.+|+|.+++... ...+++..+..++.||+.||+|||+.+ ++|+||||+|||++.++.+||+|||+++..
T Consensus 76 lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~ 150 (256)
T cd05113 76 IVTEYMSNGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYV 150 (256)
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceec
Confidence 999999999999998643 236899999999999999999999999 999999999999999999999999998765
Q ss_pred CCCCccC---cccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDISN---SSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~~~---~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
....... ..++..|++||.+.+..++.++|||||||++|||++ |..||...........+.... .
T Consensus 151 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-------~---- 219 (256)
T cd05113 151 LDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL-------R---- 219 (256)
T ss_pred CCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC-------C----
Confidence 4332222 234567999999988889999999999999999998 999997655433222221100 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
...+...+..+.+++.+||+.||.+||++.+|++.|+
T Consensus 220 ------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 220 ------LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0112234578899999999999999999999998774
No 124
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.7e-39 Score=311.14 Aligned_cols=250 Identities=20% Similarity=0.339 Sum_probs=198.3
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+.||+|+||.||+|.+.......+.+++|...........+.+.+|+.+++.+.|+||+++++++.. +..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---CceEEEEEeC
Confidence 4699999999999987554433345555554433333456789999999999999999999998753 5689999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCcc
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIS 340 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 340 (473)
++|+|.+++... ..+++..+..++.|++.||+|||..+ ++|+||||+|||++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 78 PLGPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 999999999543 36899999999999999999999999 999999999999999999999999998766432211
Q ss_pred -----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 341 -----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 341 -----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
...++..|+|||.+.+..++.++|||||||++|||++ |..||...........+.... .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~-------~-------- 216 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE-------R-------- 216 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-------c--------
Confidence 1122357999999988889999999999999999998 999997765433322221110 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
...+..++..+.+++.+||..+|.+||++.+|++.|+++.
T Consensus 217 --~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 --LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0113345578999999999999999999999999998753
No 125
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.2e-39 Score=312.82 Aligned_cols=257 Identities=18% Similarity=0.353 Sum_probs=198.8
Q ss_pred ccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC----CCc
Q 011995 178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG----SDQ 252 (473)
Q Consensus 178 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~----~~~ 252 (473)
.+++.||+|+||.||+|.+.+... ...++++..... ........+.+|+++++.++|+||+++++++.... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~-~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDS-ILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEccCCC-eeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 456899999999999998765432 233444444332 23344677899999999999999999999875421 235
Q ss_pred eEEEEEeccCCChhhhhhcC---CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 253 RMLIYERLFHGSLDRLIYGR---SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
.++||||+.+|+|.+++... .....+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 78999999999999887422 12345899999999999999999999998 9999999999999999999999999
Q ss_pred CCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccc
Q 011995 330 CAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 330 la~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
+++....... .....+..|++||.+.+..++.++|||||||++|||++ |+.||...........+. .+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-------~~ 230 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR-------QG 230 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-------cC
Confidence 9987643321 12234568999999998889999999999999999999 899997655433222111 00
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
... ..+..++..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 231 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 NRL----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 11234457789999999999999999999999999875
No 126
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.9e-40 Score=319.24 Aligned_cols=253 Identities=20% Similarity=0.260 Sum_probs=199.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
+|+..+.||+|+||.||++.... ....+++++..... .......+.+|+.+++.++|+||+++++++... +.+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK--DAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcC---CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC--CeE
Confidence 47788999999999999998543 33455555544321 122345678899999999999999999988765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~ 151 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVE 151 (285)
T ss_pred EEEEeccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999999999999888643 2346899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCCc-cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 334 IPETDI-SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 334 ~~~~~~-~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
...... ....++..|+|||.+.+..++.++|||||||++|||++|+.||.+.........+... +.
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~---~~---------- 218 (285)
T cd05605 152 IPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR---VK---------- 218 (285)
T ss_pred cCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHH---hh----------
Confidence 643322 3346789999999998888999999999999999999999999865433221111100 00
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
.....++...+..+.+|+.+||+.||.+|| ++.++++.
T Consensus 219 -~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 219 -EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 001122445667899999999999999999 88888764
No 127
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.2e-39 Score=310.91 Aligned_cols=250 Identities=21% Similarity=0.394 Sum_probs=198.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|++.+.||+|+||.||+|...++.. ++++ ...........+.+|+.++++++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~k--~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~ 76 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTK----VAVK--TLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE---EPIY 76 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCce----eEEE--EecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC---CCcE
Confidence 467788999999999999998654432 2333 333333345679999999999999999999998743 5689
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ....+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...
T Consensus 77 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~ 152 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLI 152 (260)
T ss_pred EEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeec
Confidence 999999999999998653 2346899999999999999999999999 999999999999999999999999999765
Q ss_pred CCCCcc---CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDIS---NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~~---~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
...... ...++..|+|||.+.+..++.++||||||+++|||++ |..||......+....+...
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~------------- 219 (260)
T cd05070 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG------------- 219 (260)
T ss_pred cCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-------------
Confidence 433221 2234567999999988889999999999999999999 89999765543322221100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.....+...+..+.+|+.+||..||.+|||+.++++.|++
T Consensus 220 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 220 ----YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ----CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111233456789999999999999999999999999875
No 128
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.2e-40 Score=324.45 Aligned_cols=241 Identities=20% Similarity=0.315 Sum_probs=191.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|...++ .+.+++|+..... .......+..|..++..+ +||||+++++++.+. +.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGT---NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--ENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCC---CCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--CEEEEEE
Confidence 4699999999999986543 3445566554321 123345667788888764 999999999998776 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC--
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP-- 335 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~-- 335 (473)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 76 ey~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05619 76 EYLNGGDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLG 149 (316)
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCC
Confidence 99999999999853 346899999999999999999999999 9999999999999999999999999987532
Q ss_pred CCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 336 ETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 336 ~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
........+|..|+|||++.+..++.++|||||||++|||++|..||......+....+.... +
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--------------~-- 213 (316)
T cd05619 150 DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN--------------P-- 213 (316)
T ss_pred CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--------------C--
Confidence 222344568899999999998889999999999999999999999998766544333222111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMR-SIFE 450 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-eil~ 450 (473)
.++...+.++.+++.+||+.||.+||++. ++++
T Consensus 214 --~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 214 --CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred --CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 12334557889999999999999999997 5643
No 129
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.1e-39 Score=310.74 Aligned_cols=247 Identities=16% Similarity=0.303 Sum_probs=197.0
Q ss_pred ceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 182 ~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
.||+|+||.||+|.+... ...+.+++|+..... .....+++.+|+.+++.+.|+||+++++++.. +..++||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~ 77 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMK-KSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWMLVMELA 77 (257)
T ss_pred cCCCcCCcceEEeEEecC-CCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEEEEecC
Confidence 589999999999976432 234455566554332 23345788999999999999999999998753 5679999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCc-
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI- 339 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~- 339 (473)
++|+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||.|||++.++.+||+|||++........
T Consensus 78 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 78 ELGPLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 99999999853 346899999999999999999999999 99999999999999999999999999976643321
Q ss_pred ----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 340 ----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 340 ----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
....++..|+|||.+....++.++|||||||++|||++ |..||......+....+...
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~----------------- 214 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG----------------- 214 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-----------------
Confidence 11223468999999988889999999999999999998 99999876544333222211
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
.....+..++.++.++|.+||+.||++||++.+|.+.|+..
T Consensus 215 ~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 215 ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 01112345668899999999999999999999999999863
No 130
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.7e-40 Score=325.89 Aligned_cols=236 Identities=19% Similarity=0.282 Sum_probs=189.6
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|....+ .+.+++|+.... ........+..|+.++..+ +||||+++++++... +.+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~--~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKES---GRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP--DRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCC---CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC--CEEEEEE
Confidence 4699999999999986443 345556655432 1233456678899998877 799999999988765 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC-
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE- 336 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~- 336 (473)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 76 Ey~~~g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~ 149 (320)
T cd05590 76 EFVNGGDLMFHIQK---SRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN 149 (320)
T ss_pred cCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC
Confidence 99999999998854 346899999999999999999999999 99999999999999999999999999875422
Q ss_pred -CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 337 -TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 337 -~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
.......+|+.|+|||++.+..++.++|||||||++|||++|+.||...........+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~----------------- 212 (320)
T cd05590 150 GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE----------------- 212 (320)
T ss_pred CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC-----------------
Confidence 22334568999999999998889999999999999999999999998766544332221100
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTM 445 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 445 (473)
..++...+.++.+++.+||+.||.+||++
T Consensus 213 -~~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 213 -VVYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 01233456788999999999999999998
No 131
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.3e-40 Score=327.69 Aligned_cols=241 Identities=17% Similarity=0.231 Sum_probs=194.3
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEe
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~ 259 (473)
+.||+|+||.||++....+...+..+++++..... .......+.+|+++|.+++||||+++++++..+ +..|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE--GKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC--CEEEEEEcC
Confidence 67999999999999754344455666677665322 222345677899999999999999999998766 789999999
Q ss_pred ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC--
Q 011995 260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET-- 337 (473)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~-- 337 (473)
+.+|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 80 ~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 80 LRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 999999999843 346899999999999999999999999 999999999999999999999999998765433
Q ss_pred CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCC
Q 011995 338 DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG 417 (473)
Q Consensus 338 ~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 417 (473)
......+++.|+|||.+.+..++.++|||||||++|||++|+.||...........+... ..
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~------------------~~ 215 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA------------------KL 215 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC------------------CC
Confidence 223456889999999998888999999999999999999999999876544332222100 00
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 011995 418 RFPLKAARTVADIALRCLQKEPSERPTMRS 447 (473)
Q Consensus 418 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 447 (473)
.++...+.++.+++.+||+.||.+||++.+
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 123445678899999999999999999544
No 132
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.6e-39 Score=311.11 Aligned_cols=252 Identities=22% Similarity=0.372 Sum_probs=201.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|.+.+.||+|+||.||+|...++. .+++ +.+.........+.+|+++++.++|+||+++++++.. +..+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~----~val--K~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~ 76 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTT----RVAI--KTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIY 76 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCc----eEEE--EecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC---CCcE
Confidence 46888999999999999999865442 2333 3333333345678999999999999999999988743 5679
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 77 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~ 152 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI 152 (262)
T ss_pred EEEEcCCCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeec
Confidence 999999999999999643 2346899999999999999999999999 999999999999999999999999999766
Q ss_pred CCCCcc---CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDIS---NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~~---~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
...... ...++..|++||++.+..++.++|||||||++|||++ |..||...........+....
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~------------ 220 (262)
T cd05071 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY------------ 220 (262)
T ss_pred cccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC------------
Confidence 433221 2234567999999988889999999999999999999 888997765443322221110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
....+...+..+.+++.+||+.||++||++.++++.|++..
T Consensus 221 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 221 -----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred -----CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 00113345678899999999999999999999999998753
No 133
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.3e-39 Score=309.58 Aligned_cols=248 Identities=16% Similarity=0.293 Sum_probs=195.9
Q ss_pred ceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEecc
Q 011995 182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261 (473)
Q Consensus 182 ~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~ 261 (473)
.||+|+||.||+|.+.... ....+++++..........+.+.+|+.++++++|+||+++++++.. ...++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~-~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRK-KQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCC-CceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEEEEEeCC
Confidence 3899999999999865322 2233445554433334445679999999999999999999998743 57899999999
Q ss_pred CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCc--
Q 011995 262 HGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI-- 339 (473)
Q Consensus 262 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~-- 339 (473)
+|+|.+++... ...+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++........
T Consensus 78 ~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 78 GGPLNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred CCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence 99999998542 346899999999999999999999999 99999999999999999999999999875533211
Q ss_pred ---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 340 ---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 340 ---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
....++..|+|||.+.+..++.++|||||||++|||++ |..||...........+... .
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----------------~ 215 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG-----------------K 215 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-----------------C
Confidence 11122468999999988889999999999999999996 99999876544332222110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
...++..++.++.+++.+||..||++||++.+|.+.|+.+
T Consensus 216 ~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 216 RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1122345568899999999999999999999999999864
No 134
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.8e-40 Score=326.35 Aligned_cols=246 Identities=19% Similarity=0.238 Sum_probs=195.7
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCC-CcccceeeeecCCCCc
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHP-NLCKLLGFHARDGSDQ 252 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~Hp-nIv~l~g~~~~~~~~~ 252 (473)
+|...+.||+|+||.||+|...+. .+.+++|+.... ......+.+..|++++..+.|+ +|+.+++++... +.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGT---DELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM--DR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC--CE
Confidence 477889999999999999986543 345566655432 1234456788899999999765 577888887765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCK 149 (324)
T ss_pred EEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcce
Confidence 9999999999999998853 345899999999999999999999999 9999999999999999999999999986
Q ss_pred ccC--CCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIP--ETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~--~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
... ........+|+.|+|||++.+..++.++|||||||++|||++|+.||...........+...
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------------- 216 (324)
T cd05587 150 ENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------------- 216 (324)
T ss_pred ecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-------------
Confidence 432 22233456889999999999989999999999999999999999999876544333222100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM-----RSIFE 450 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~ 450 (473)
...++...+.++.+++.+||..||.+|++. .++++
T Consensus 217 -----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 256 (324)
T cd05587 217 -----NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE 256 (324)
T ss_pred -----CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 012234456789999999999999999976 56654
No 135
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=6.9e-40 Score=324.11 Aligned_cols=241 Identities=20% Similarity=0.298 Sum_probs=190.3
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|...+. .+.+++|+.+... .......+..|..++..+ +||||+++++++... +.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~--~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGT---NEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK--EHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC--CEEEEEE
Confidence 4699999999999986543 3445566554321 223345566777777654 899999999988765 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~ 337 (473)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 76 e~~~gg~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~ 149 (316)
T cd05592 76 EYLNGGDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG 149 (316)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCC
Confidence 99999999998853 346899999999999999999999999 999999999999999999999999998754322
Q ss_pred --CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 338 --DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 338 --~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
......+|+.|+|||.+.+..++.++|||||||++|||++|..||.+.........+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~----------------- 212 (316)
T cd05592 150 EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR----------------- 212 (316)
T ss_pred CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------------
Confidence 2234568999999999998889999999999999999999999998766543332221110
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMR-SIFE 450 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-eil~ 450 (473)
..++...+.++.+++.+||+.||.+||++. ++++
T Consensus 213 -~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 213 -PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 112344567889999999999999999875 5543
No 136
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.3e-39 Score=312.46 Aligned_cols=257 Identities=19% Similarity=0.338 Sum_probs=203.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|...+.||+|+||.||+|....+......+++|+............|..|+.+++.++||||+++++++..+ ...+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--RPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC--CceE
Confidence 35777899999999999999976554433445555544333444567899999999999999999999998665 7889
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++|+|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++...
T Consensus 82 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 82 IITEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccc
Confidence 999999999999998543 346899999999999999999999999 999999999999999999999999998765
Q ss_pred CCCCc----cCcc---cccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 335 PETDI----SNSS---VAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 335 ~~~~~----~~~~---~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
..... .... .+..|++||.+.+..++.++|||||||++|||++ |..||...........+.. ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~-------~~~ 229 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ-------DYR 229 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-------CCc
Confidence 43221 1111 1347999999998899999999999999999886 9999977654332222210 000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
...+..++..+.+++.+||+.+|.+||++.+|+..|+++
T Consensus 230 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 ----------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ----------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 011234457789999999999999999999999999865
No 137
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=7e-40 Score=324.77 Aligned_cols=242 Identities=18% Similarity=0.268 Sum_probs=193.7
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|...+. ...+++|+.... ........+..|++++..+ +||||+++++++... +..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~--~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGT---DEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK--DRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCC---CCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CeEEEEE
Confidence 4699999999999986543 344556655432 1234456678899999876 899999999998766 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~ 337 (473)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 76 E~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~ 149 (321)
T cd05591 76 EYVNGGDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILN 149 (321)
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccC
Confidence 99999999988853 346899999999999999999999999 999999999999999999999999998754222
Q ss_pred --CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 338 --DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 338 --~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
......+++.|+|||++.+..++.++|||||||++|||++|+.||...........+... .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~------~----------- 212 (321)
T cd05591 150 GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD------D----------- 212 (321)
T ss_pred CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------C-----------
Confidence 233456889999999999889999999999999999999999999876654433222110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-------CHHHHHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERP-------TMRSIFEE 451 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-------t~~eil~~ 451 (473)
..++...+.++.+++.+||+.||++|+ ++.++++.
T Consensus 213 -~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 213 -VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred -CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 012333567889999999999999999 78888754
No 138
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.6e-40 Score=325.24 Aligned_cols=246 Identities=18% Similarity=0.231 Sum_probs=196.0
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCc
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~ 252 (473)
+|...+.||+|+||.||+|....+ .+.+++|+..... .......+..|..++..+ +|++|+++++++... +.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGT---DELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM--DR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC--CE
Confidence 577889999999999999986543 3445566554321 223345677788888877 688999999988765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~ 149 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred EEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCce
Confidence 9999999999999998854 245899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
..... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||...........+...
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------------- 216 (323)
T cd05616 150 ENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------------- 216 (323)
T ss_pred ecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------
Confidence 54322 223456889999999999999999999999999999999999999876654433222110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM-----RSIFE 450 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~ 450 (473)
...++...+.++.+++.+||+.||.+|+++ .++++
T Consensus 217 -----~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 217 -----NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred -----CCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 012244566889999999999999999984 55553
No 139
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.3e-39 Score=314.66 Aligned_cols=257 Identities=20% Similarity=0.344 Sum_probs=200.0
Q ss_pred cccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.+|.....||+|+||.||++...+.. .....++++... .........+.+|+++++.++|+||+++++++... +.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTVLQHQHIVRFYGVCTEG--RP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecC-cCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC--Cc
Confidence 45677799999999999999754321 122333333322 22334456899999999999999999999998765 77
Q ss_pred eEEEEEeccCCChhhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSD------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+.+ ++||||||+|||++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCC
Confidence 8999999999999999865321 135899999999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhh
Q 011995 321 FSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 395 (473)
+.+||+|||++........ ....+++.|+|||.+.+..++.++|||||||++|||++ |.+||...........+.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 9999999999876543221 12234578999999998889999999999999999998 999997655443332221
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.... ...+..++..+.+|+.+||+.||.+||++.+|++.|++
T Consensus 239 ~~~~-----------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 239 QGRE-----------------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred cCcc-----------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1100 01123445778999999999999999999999998863
No 140
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.1e-40 Score=338.95 Aligned_cols=266 Identities=15% Similarity=0.181 Sum_probs=194.1
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecC-----
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD----- 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~----- 248 (473)
..+|...+.||+|+||.||+|...+. ...+++|+.... .....+|+.+|+.++|+|||++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~---~~~vAiK~i~~~-----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDT---SEKVAIKKVLQD-----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCC---CCEEEEEEEecC-----cchHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence 45799999999999999999986543 334445443221 12345799999999999999999886532
Q ss_pred -CCCceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-cEEE
Q 011995 249 -GSDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF-SAKL 325 (473)
Q Consensus 249 -~~~~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-~vkl 325 (473)
....+++||||+++ +|.+++... .....+++..+..++.||+.||+|||+++ |+||||||+||||+.++ .+||
T Consensus 137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceee
Confidence 11246799999975 777666421 23457899999999999999999999999 99999999999999664 7999
Q ss_pred eccCCCcccCCC-CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc--cccc
Q 011995 326 SGYGCAGHIPET-DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS--RPFL 401 (473)
Q Consensus 326 ~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~~~ 401 (473)
+|||+++.+... ......+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+....+....+... .+..
T Consensus 213 ~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 213 CDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred eccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 999999876433 23345678999999998764 5899999999999999999999999876654433222111 0000
Q ss_pred cc---------ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 AD---------DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~~---------~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.. ...+..+....+...++...+.++.+|+.+||++||.+|||+.|+++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00 000000111111222344456789999999999999999999999854
No 141
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4e-39 Score=311.12 Aligned_cols=251 Identities=22% Similarity=0.390 Sum_probs=194.7
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|.+.++.. .+.++++... ........+.+|++++.++ +||||+++++++... +..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGL---RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCC---eeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--CCceEEE
Confidence 368999999999999765432 2223333333 2334556789999999999 899999999998765 6789999
Q ss_pred EeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEE
Q 011995 258 ERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+ ++|+||||+|||++.++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEE
Confidence 9999999999986432 1235889999999999999999999998 99999999999999999999
Q ss_pred EeccCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccc
Q 011995 325 LSGYGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 325 l~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
|+|||++....... ......+..|+|||++....++.++|||||||++|||++ |..||...........+..
T Consensus 153 l~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~------ 226 (270)
T cd05047 153 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ------ 226 (270)
T ss_pred ECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC------
Confidence 99999985332111 111223567999999988889999999999999999997 9999976543332221110
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
. .....+...+.++.+++.+||..||.+|||+.++++.|+++.
T Consensus 227 -~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 -G----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -C----------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 000112334567899999999999999999999999998864
No 142
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.5e-39 Score=315.44 Aligned_cols=259 Identities=23% Similarity=0.352 Sum_probs=203.0
Q ss_pred hcccccCcceeecCCceEEEEEECCC--CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|+..+.||+|+||.||+|..... ......+++++............+.+|+.+++.++||||+++++++..+ +
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~--~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG--K 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--C
Confidence 46788899999999999999986431 1233455555544333344567799999999999999999999998765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCC-------------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRS-------------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFST 312 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp 312 (473)
..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+.+ ++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccH
Confidence 8899999999999999996421 1235788999999999999999999999 99999999
Q ss_pred CceeeCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCCh
Q 011995 313 ANIQIDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHP 387 (473)
Q Consensus 313 ~NILl~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~ 387 (473)
+|||++.++.++|+|||++........ .....+..|+|||.+.+..++.++|||||||++|||++ |..||.+...
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999876533321 12233567999999998899999999999999999997 8888876554
Q ss_pred HHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 388 KEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.+....+.... . ...+...+.++.+|+.+||+.||.+|||+.||++.|++
T Consensus 239 ~~~~~~~~~~~----------------~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 EEVIYYVRDGN----------------V-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHHhcCC----------------C-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 33222111100 0 01123445789999999999999999999999999974
No 143
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-41 Score=304.99 Aligned_cols=255 Identities=19% Similarity=0.329 Sum_probs=204.1
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCccccee
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLG 243 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g 243 (473)
....||+.. ..||.|+.|.||+++++. +++.++||..+.....+..++++..++++...+ .|+||+++|
T Consensus 89 ~dindl~~l-------~dlGsGtcG~V~k~~~rs---~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~G 158 (391)
T KOG0983|consen 89 ADINDLENL-------GDLGSGTCGQVWKMRFRS---TGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFG 158 (391)
T ss_pred cChHHhhhH-------HhhcCCCccceEEEEEcc---cceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeee
Confidence 444555544 889999999999999654 456777888877777778889999999988875 999999999
Q ss_pred eeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcE
Q 011995 244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 323 (473)
Q Consensus 244 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~v 323 (473)
||..+ ..+++.||.|. ..++.++.. -..++++..+-++...++.||.||.+++ .|||||+||+|||+|+.|++
T Consensus 159 yFi~n--~dV~IcMelMs-~C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~Gni 231 (391)
T KOG0983|consen 159 YFITN--TDVFICMELMS-TCAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNI 231 (391)
T ss_pred EEeeC--chHHHHHHHHH-HHHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCE
Confidence 99987 67889999983 356666643 2346999999999999999999999887 69999999999999999999
Q ss_pred EEeccCCCcccCCCC-ccCcccccccCChhhhhc---CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-HhHhhhcc
Q 011995 324 KLSGYGCAGHIPETD-ISNSSVAAANLSVETLER---GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RNLVKWSR 398 (473)
Q Consensus 324 kl~DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~---~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~~~~~~~ 398 (473)
|+||||++..+.... .+...|.+.|||||.+.- ..|+.++||||||+.++||.||+.||.+.+...+ ...+....
T Consensus 232 KlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e 311 (391)
T KOG0983|consen 232 KLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE 311 (391)
T ss_pred EeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC
Confidence 999999998775543 345678899999999843 4589999999999999999999999988544322 22221111
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.|.+.+ ....+..+.+|+..||.+|+.+||...++|+.
T Consensus 312 -------------PP~L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 312 -------------PPLLPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred -------------CCCCCc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 122222 22377899999999999999999999999864
No 144
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=7.7e-40 Score=323.77 Aligned_cols=240 Identities=20% Similarity=0.298 Sum_probs=190.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|....+ ++.+++|+..... .......+..|..++... +||||+++++++.+. +.+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGK---GEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK--EHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCC---CCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC--CEEEEEE
Confidence 4699999999999986543 3455565554321 123445667788888764 899999999998766 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC--
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP-- 335 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~-- 335 (473)
||+.+|+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 76 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05620 76 EFLNGGDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG 149 (316)
T ss_pred CCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC
Confidence 99999999998853 346899999999999999999999999 9999999999999999999999999987432
Q ss_pred CCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 336 ETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 336 ~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
........+++.|+|||++.+..++.++|||||||++|||++|+.||...........+.... +
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~--------------~-- 213 (316)
T cd05620 150 DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT--------------P-- 213 (316)
T ss_pred CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--------------C--
Confidence 222344578999999999999999999999999999999999999998765543332221110 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMR-SIF 449 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-eil 449 (473)
.++...+.++.+++.+||+.||.+||++. +++
T Consensus 214 --~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 214 --HYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred --CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 12334567889999999999999999985 555
No 145
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.8e-39 Score=308.71 Aligned_cols=250 Identities=22% Similarity=0.370 Sum_probs=199.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|.....||+|+||.||+|.+.+.. .+++ +...........+.+|+.+++.++|+|++++++++.. +..+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~----~~~l--K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 76 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTT----KVAI--KTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE---EPIY 76 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCc----eEEE--EEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC---CCcE
Confidence 45888899999999999999865542 2233 3333333445678899999999999999999988743 5689
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+.+|+|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 77 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~ 152 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLI 152 (260)
T ss_pred EEEEcCCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEc
Confidence 999999999999999653 2345899999999999999999999999 999999999999999999999999999766
Q ss_pred CCCCcc---CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDIS---NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~~---~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
...... ...++..|++||.+.+..++.++|||||||++|||++ |..||.+.........+...
T Consensus 153 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~------------- 219 (260)
T cd05069 153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG------------- 219 (260)
T ss_pred cCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------
Confidence 433221 2234578999999988889999999999999999999 99999876544332221110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
....++...+..+.+++.+||..||.+||++++|++.|++
T Consensus 220 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 220 ----YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ----CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0001233456789999999999999999999999999985
No 146
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.4e-39 Score=318.00 Aligned_cols=263 Identities=21% Similarity=0.358 Sum_probs=205.4
Q ss_pred cccccCcceeecCCceEEEEEECCC----CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDD----ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG 249 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~ 249 (473)
++|.+.+.||+|+||.||++...+. ......+++|.............+.+|+.++..+ +||||+++++++...
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE- 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC-
Confidence 5677889999999999999975321 1122334444444333444566789999999999 699999999998765
Q ss_pred CCceEEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCcee
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQ 316 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NIL 316 (473)
+..++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+++ |+||||||+|||
T Consensus 91 -~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nil 166 (314)
T cd05099 91 -GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVL 166 (314)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEE
Confidence 67999999999999999996532 1245899999999999999999999999 999999999999
Q ss_pred eCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHH
Q 011995 317 IDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEER 391 (473)
Q Consensus 317 l~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~ 391 (473)
++.++.+||+|||+++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.........
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999976643221 11223467999999988889999999999999999999 89999766544333
Q ss_pred hHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 392 NLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
..+.. ... ...+..++.++.+++.+||..||++|||+.++++.|+++....
T Consensus 247 ~~~~~-------~~~----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 247 KLLRE-------GHR----------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HHHHc-------CCC----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 22210 000 0113345578899999999999999999999999999886543
No 147
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.8e-39 Score=315.89 Aligned_cols=273 Identities=19% Similarity=0.284 Sum_probs=202.7
Q ss_pred ccccCcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.|+..+.||+|+||.||.+.+.. +....+.+++|.............+.+|+++++.++|+||+++++++...+....+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 46778999999999999998642 23344555566554333444557799999999999999999999998876557789
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+++ ++||||||+|||++.++.++|+|||++...
T Consensus 85 lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence 999999999999998543 336899999999999999999999999 999999999999999999999999999866
Q ss_pred CCCCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 335 PETDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 335 ~~~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
..... ....++..|+|||++.+..++.++|||||||++|||++++.|+...........-.+.... ... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 237 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQM-TVT-RLVR 237 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccc-cHH-HHHH
Confidence 43221 1234556799999998888999999999999999999987765332110000000000000 000 0000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
..........+..++..+.+|+.+||+.||.+||++.++++.|+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000001111334568899999999999999999999999999875
No 148
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=321.14 Aligned_cols=248 Identities=18% Similarity=0.285 Sum_probs=212.1
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
=|...+.||+|.|++|-+|+ +..++.+++||++.... ..-....+.+|+..|+.++|||||+||++..+. ..+|
T Consensus 19 LYDLekTlG~GHFAVVKLAr---HVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ--TKly 93 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLAR---HVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ--TKLY 93 (864)
T ss_pred eehhhhhhcCCceehhhhhh---hhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc--ceEE
Confidence 36666889999999999997 77888888888876543 344557789999999999999999999987655 8899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-CCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-KDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~~vkl~DFGla~~ 333 (473)
||+|+-++|+|+|+|.+. ...+.+....+++.||+.||.|+|+.+ +|||||||+||.+- .-|.|||.|||++..
T Consensus 94 LiLELGD~GDl~DyImKH--e~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 94 LILELGDGGDLFDYIMKH--EEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNK 168 (864)
T ss_pred EEEEecCCchHHHHHHhh--hccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeecccccc
Confidence 999999999999999654 445899999999999999999999998 99999999998775 569999999999976
Q ss_pred cC-CCCccCcccccccCChhhhhcCCCC-CcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 334 IP-ETDISNSSVAAANLSVETLERGLLT-PKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~-~~~~~~~~~t~~y~aPE~~~~~~~s-~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
+. .....+.+|+..|-|||++.+..|+ +++||||||||||.|++|++||...++.+....| +
T Consensus 169 f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmI----------------m 232 (864)
T KOG4717|consen 169 FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMI----------------M 232 (864)
T ss_pred CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhh----------------h
Confidence 64 4466788999999999999999986 7899999999999999999999987766644333 2
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
|-.. ..|..++.++++||..||+.||.+|.+.+||...
T Consensus 233 DCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 233 DCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred cccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 2221 2377899999999999999999999999999753
No 149
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-41 Score=343.49 Aligned_cols=277 Identities=18% Similarity=0.344 Sum_probs=224.7
Q ss_pred CcCCCHHHHHHHhcc---------cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHH
Q 011995 162 LRNFPLDEVAAACHN---------FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTL 230 (473)
Q Consensus 162 ~~~~~~~el~~~~~~---------f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l 230 (473)
...++|++--++... ..+.++||.|-||.||+|+++-... +.+.|++|.++ ..+....+|+.|..||
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgk--re~~VAIKTLK~GytekqrrdFL~EAsIM 684 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGK--REITVAIKTLKAGYTEKQRRDFLSEASIM 684 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCC--cceeEEEeeeccCccHHHHhhhhhhhhhc
Confidence 344666554444333 3466899999999999999866543 34445555555 3566678899999999
Q ss_pred HhCCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCC
Q 011995 231 ASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310 (473)
Q Consensus 231 ~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 310 (473)
.+++||||++|.|+.... ..++||.|||++|+|+.+|+.+ .+.|.+.+..-++++|+.|+.||-+.+ +|||||
T Consensus 685 GQFdHPNIIrLEGVVTks--~PvMIiTEyMENGsLDsFLR~~--DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDL 757 (996)
T KOG0196|consen 685 GQFDHPNIIRLEGVVTKS--KPVMIITEYMENGSLDSFLRQN--DGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDL 757 (996)
T ss_pred ccCCCCcEEEEEEEEecC--ceeEEEhhhhhCCcHHHHHhhc--CCceEeehHHHHHHHHHHHhHHHhhcC---chhhhh
Confidence 999999999999998765 7899999999999999999764 456999999999999999999999999 999999
Q ss_pred CCCceeeCCCCcEEEeccCCCcccCCCC---ccCccc--ccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCC
Q 011995 311 STANIQIDKDFSAKLSGYGCAGHIPETD---ISNSSV--AAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDS 384 (473)
Q Consensus 311 kp~NILl~~~~~vkl~DFGla~~~~~~~---~~~~~~--t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~ 384 (473)
...|||++.+..+||+|||+++.+.++. +++..| ...|.|||.+...+++.+||||||||++||.++ |+.||.+
T Consensus 758 AARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd 837 (996)
T KOG0196|consen 758 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 837 (996)
T ss_pred hhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc
Confidence 9999999999999999999999775443 222222 378999999999999999999999999999876 9999998
Q ss_pred CChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCCCcc
Q 011995 385 RHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSSSST 464 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~~~~ 464 (473)
....+-...++ ++.++ .-|.+++..+.+|+..||++|-.+||.+.+|+..|+++-..-.+=+.
T Consensus 838 mSNQdVIkaIe-------~gyRL----------PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~ 900 (996)
T KOG0196|consen 838 MSNQDVIKAIE-------QGYRL----------PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKT 900 (996)
T ss_pred cchHHHHHHHH-------hccCC----------CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcc
Confidence 77665444332 22222 12678889999999999999999999999999999998765555333
No 150
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.7e-39 Score=312.11 Aligned_cols=259 Identities=17% Similarity=0.330 Sum_probs=204.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||+|.+.+.......++++...........+.+.+|+.+++.++|+||+++++++.+ +..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE---NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC---CCcE
Confidence 4577789999999999999987544222233444444433334456789999999999999999999998864 5678
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++|+|.+++... ...+++..+..++.+++.||.|||+.+ ++|+||||+|||++.++.+||+|||++...
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 83 IVMELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeec
Confidence 999999999999999543 335899999999999999999999998 999999999999999999999999998766
Q ss_pred CCCCc---cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDI---SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~---~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
..... .....+..|+|||.+....++.++|||||||++|||++ |..||......+....+.... ..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-------~~--- 227 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE-------RL--- 227 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-------cC---
Confidence 43321 11223467999999988889999999999999999986 999997765443322221110 00
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
..+..++..+.+++.+||..+|.+|||+.++++.|+.+...
T Consensus 228 -------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11334567899999999999999999999999999988754
No 151
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=8.6e-40 Score=331.94 Aligned_cols=248 Identities=18% Similarity=0.199 Sum_probs=194.0
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.|+..+.||+|+||.||+|.... ..+.+++|+..... .......+.+|+.+++.++|+|||++++++.+. +.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~--~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVD---TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK--DNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECC---CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC--CEE
Confidence 57888999999999999998544 34455566554321 223456788999999999999999999998866 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 77 ~lv~E~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~ 150 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (382)
T ss_pred EEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence 9999999999999998543 45889999999999999999999999 99999999999999999999999999753
Q ss_pred cCCC-------------------------------------------------CccCcccccccCChhhhhcCCCCCcCC
Q 011995 334 IPET-------------------------------------------------DISNSSVAAANLSVETLERGLLTPKSN 364 (473)
Q Consensus 334 ~~~~-------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~s~~sD 364 (473)
+... ......||+.|+|||++.+..++.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D 230 (382)
T cd05625 151 FRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 230 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeee
Confidence 2100 001236789999999999889999999
Q ss_pred chHHHHHHHHHHcCCCCCCCCChHHHHhH-hhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 011995 365 VWSFGIVLLELLTGRKNLDSRHPKEERNL-VKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP 443 (473)
Q Consensus 365 vwSlGvvl~elltG~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 443 (473)
||||||++|||++|++||......+.... +.|... +........+.++.+++.+|+ .+|.+|+
T Consensus 231 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------~~~p~~~~~s~~~~~li~~l~-~~p~~R~ 294 (382)
T cd05625 231 WWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTS---------------LHIPPQAKLSPEASDLIIKLC-RGPEDRL 294 (382)
T ss_pred EEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCC---------------cCCCCcccCCHHHHHHHHHHc-cCHhHcC
Confidence 99999999999999999987665443221 222110 000012245677888888876 5999999
Q ss_pred C---HHHHHH
Q 011995 444 T---MRSIFE 450 (473)
Q Consensus 444 t---~~eil~ 450 (473)
+ +.++++
T Consensus 295 ~~~~~~ei~~ 304 (382)
T cd05625 295 GKNGADEIKA 304 (382)
T ss_pred CCCCHHHHhc
Confidence 7 888775
No 152
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.1e-39 Score=323.06 Aligned_cols=242 Identities=20% Similarity=0.278 Sum_probs=193.4
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|....+ ...+++|+.+.. ........+.+|++++..+ +||||+++++++... +.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~--~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGT---DELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK--DRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCC---CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CEEEEEE
Confidence 4699999999999986543 344556655432 1233456678899999888 799999999998765 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC-
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE- 336 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~- 336 (473)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 76 e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 149 (318)
T cd05570 76 EYVNGGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG 149 (318)
T ss_pred cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcC
Confidence 99999999988853 346999999999999999999999999 99999999999999999999999999865322
Q ss_pred -CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 337 -TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 337 -~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
.......++..|+|||++.+..++.++|||||||++|||++|..||...........+...
T Consensus 150 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~------------------ 211 (318)
T cd05570 150 GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED------------------ 211 (318)
T ss_pred CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC------------------
Confidence 2223446889999999999999999999999999999999999999876543322211100
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTM-----RSIFEE 451 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~~ 451 (473)
...++...+..+.+|+.+||+.||.+||++ .++++.
T Consensus 212 ~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 212 EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 001233456789999999999999999999 777653
No 153
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.4e-39 Score=307.56 Aligned_cols=250 Identities=20% Similarity=0.336 Sum_probs=198.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||++...+.. ++++... .....+.+.+|+.++++++|+|++++++++...+ +..+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~-----~~~k~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~ 76 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGNK-----VAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-GGLY 76 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCCc-----EEEEEeC---CCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCC-CceE
Confidence 46888899999999999999865432 2333332 2233567899999999999999999999875442 6789
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ....+++..+..++.|++.||+|||+++ ++||||||+||+++.++.+||+|||++...
T Consensus 77 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~ 152 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152 (256)
T ss_pred EEEECCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceec
Confidence 999999999999998653 2345899999999999999999999999 999999999999999999999999998755
Q ss_pred CCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 335 PETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 335 ~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
.... .....+..|+|||++.+..++.++|||||||++|||++ |..||...........+.. +
T Consensus 153 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-------~--------- 215 (256)
T cd05082 153 SSTQ-DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-------G--------- 215 (256)
T ss_pred cccC-CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-------C---------
Confidence 3322 23344568999999988889999999999999999997 9999976544332221110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
.....+..++..+.+++.+||+.||++|||+.++++.|+++
T Consensus 216 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 216 -YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00112334567899999999999999999999999999864
No 154
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=8.9e-40 Score=330.23 Aligned_cols=253 Identities=14% Similarity=0.145 Sum_probs=198.7
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
..++|+..+.||+|+||.||++.... ..+.+++|+.... ........+.+|+.+++.++||||+++++++.+.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~-- 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKS---SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD-- 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC--
Confidence 35689999999999999999998644 3345556655421 1223345578899999999999999999988765
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+.+|+||||+++|+|.+++.. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~ 188 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 188 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccc
Confidence 789999999999999999843 24788899999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCC---ccCcccccccCChhhhhcC----CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 331 AGHIPETD---ISNSSVAAANLSVETLERG----LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 331 a~~~~~~~---~~~~~~t~~y~aPE~~~~~----~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
+....... .....+|+.|+|||++.+. .++.++|||||||++|||++|..||...........+.....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~---- 264 (370)
T cd05596 189 CMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN---- 264 (370)
T ss_pred eeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC----
Confidence 87654332 2345689999999998653 378999999999999999999999987654433222211000
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE--RPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 451 (473)
.+........+.++.+|+.+||..+|.+ |+++.++++.
T Consensus 265 ----------~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 ----------SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ----------cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0000001235688999999999999988 9999999765
No 155
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.4e-40 Score=333.34 Aligned_cols=250 Identities=19% Similarity=0.191 Sum_probs=196.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|++.+.||+|+||.||+|.... ..+.+++|+..... .......+.+|+++|..++|+||+++++++.++ +.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~--~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVD---TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK--DN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECC---CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC--CE
Confidence 368889999999999999998544 34556666554321 122346688999999999999999999998766 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~ 149 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (376)
T ss_pred EEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence 9999999999999999954 345888999999999999999999999 9999999999999999999999999975
Q ss_pred ccCCC---------------------------------------------CccCcccccccCChhhhhcCCCCCcCCchH
Q 011995 333 HIPET---------------------------------------------DISNSSVAAANLSVETLERGLLTPKSNVWS 367 (473)
Q Consensus 333 ~~~~~---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~s~~sDvwS 367 (473)
.+... ......||+.|||||++.+..++.++||||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 229 (376)
T cd05598 150 GFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 229 (376)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeee
Confidence 32100 001246889999999999989999999999
Q ss_pred HHHHHHHHHcCCCCCCCCChHHHHhHh-hhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC---
Q 011995 368 FGIVLLELLTGRKNLDSRHPKEERNLV-KWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP--- 443 (473)
Q Consensus 368 lGvvl~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP--- 443 (473)
|||++|||++|+.||......+....+ .|... +.......++.++.+++.+|+ .+|.+|+
T Consensus 230 lGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---------------~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~ 293 (376)
T cd05598 230 VGVILYEMLVGQPPFLADTPAETQLKVINWETT---------------LHIPSQAKLSREASDLILRLC-CGAEDRLGKN 293 (376)
T ss_pred ccceeeehhhCCCCCCCCCHHHHHHHHhccCcc---------------ccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCC
Confidence 999999999999999876654432222 22110 000011235677888999876 5999999
Q ss_pred CHHHHHHH
Q 011995 444 TMRSIFEE 451 (473)
Q Consensus 444 t~~eil~~ 451 (473)
++.++++.
T Consensus 294 t~~ell~h 301 (376)
T cd05598 294 GADEIKAH 301 (376)
T ss_pred CHHHHhCC
Confidence 89999865
No 156
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=7.1e-40 Score=330.78 Aligned_cols=252 Identities=15% Similarity=0.165 Sum_probs=196.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|+..+.||+|+||.||++....+ .+.+++|+.... ........+.+|+.+++.++||||+++++++.++ +
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~--~ 116 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSS---QKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD--K 116 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--C
Confidence 57899999999999999999986543 345555554321 1223345678999999999999999999998765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+|+||||+++|+|.+++.. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccc
Confidence 89999999999999999843 24888999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC---ccCcccccccCChhhhhcC----CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 332 GHIPETD---ISNSSVAAANLSVETLERG----LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 332 ~~~~~~~---~~~~~~t~~y~aPE~~~~~----~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
....... .....+|+.|+|||++.+. .++.++|||||||++|||++|..||...........+... .
T Consensus 190 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~------~ 263 (370)
T cd05621 190 MKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDH------K 263 (370)
T ss_pred eecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhC------C
Confidence 8664322 2345689999999999754 3788999999999999999999999876544332222100 0
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE--RPTMRSIFEE 451 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 451 (473)
. .+........+..+.+++.+||..++.+ |+++.++++.
T Consensus 264 ~--------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 264 N--------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred c--------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0 0000011245678899999999855543 8899999886
No 157
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.5e-39 Score=315.64 Aligned_cols=252 Identities=18% Similarity=0.263 Sum_probs=197.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|+||.||+|.... ....+++++............+.+|++++.+++||||+++++++..+ +..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLL---TRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE--NRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcC---CCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC--CEEE
Confidence 357778999999999999998543 34456666655444445567799999999999999999999999876 7889
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|..+. .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++...
T Consensus 76 lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~ 145 (279)
T cd06619 76 ICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQL 145 (279)
T ss_pred EEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence 999999999996542 3678899999999999999999999 999999999999999999999999999876
Q ss_pred CCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh-Hhhhccccccccccccccccc
Q 011995 335 PETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN-LVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 335 ~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 413 (473)
.........++..|+|||++.+..++.++|||||||++|+|++|..||.......... ...+. ..+.+.
T Consensus 146 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~----------~~~~~~ 215 (279)
T cd06619 146 VNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLL----------QCIVDE 215 (279)
T ss_pred ccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHH----------HHHhcc
Confidence 5444455678899999999998889999999999999999999999996533211100 00000 000000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..........+.++.+++.+||+.||.+||+++++++.
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 216 DPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00000012345678999999999999999999999875
No 158
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-40 Score=296.30 Aligned_cols=264 Identities=19% Similarity=0.270 Sum_probs=209.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecC---CC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD---GS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~---~~ 250 (473)
-++|.+.+.||+|||+-||.+. +..+.+.+|+|.+.... .+..+..++|++..++++||||++++++...+ +.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~---~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVK---GLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred CceEEEeeeecCCCceeeeeec---ccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 3579999999999999999997 66677777777665543 56778899999999999999999999887543 44
Q ss_pred CceEEEEEeccCCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
.+.||+++|...|+|.+.+..... +..+++.+++.|+.+|++||++||+..+ ++.||||||.|||+++.+.++|.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEecc
Confidence 679999999999999999976543 4478999999999999999999999985 59999999999999999999999999
Q ss_pred CCcccCCC-----------CccCcccccccCChhhhhc---CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh
Q 011995 330 CAGHIPET-----------DISNSSVAAANLSVETLER---GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 330 la~~~~~~-----------~~~~~~~t~~y~aPE~~~~---~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~ 395 (473)
.++...-. +......|..|.|||.+.- ...+.++|||||||+||+|+.|..||+.... . ..-+
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-~-GgSl- 251 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-Q-GGSL- 251 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-c-CCeE-
Confidence 98765321 1123345889999999853 3478999999999999999999999975332 1 1100
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
.-.+.+..+.-.-....++.+.++|..||+.||.+||++.+++..++.+-
T Consensus 252 -----------aLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 252 -----------ALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -----------EEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 01111112111112236789999999999999999999999999998763
No 159
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.3e-39 Score=310.72 Aligned_cols=260 Identities=20% Similarity=0.260 Sum_probs=203.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||+|....+ .+.++++...... .......+.+|+.+++.++|+||+++++++..+ +.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~---~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLD---GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED--NE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCC---CceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC--Ce
Confidence 4688889999999999999985433 3344454433221 223456788999999999999999999998876 78
Q ss_pred eEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.++||||+++++|.+++.... ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~ 153 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhh
Confidence 999999999999999885422 2356899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....... .....++..|+|||++.+..++.++||||||+++|||++|..||........ ..... +..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~----------~~~ 222 (267)
T cd08229 154 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCKK----------IEQ 222 (267)
T ss_pred hccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-HHhhh----------hhc
Confidence 7664322 2234677899999999888899999999999999999999999975432211 11110 000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
...+.. .....+..+.+++.+||..||.+|||+.+|++.++++.
T Consensus 223 ~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 223 CDYPPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCCCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 001111 12346678999999999999999999999999998864
No 160
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.5e-39 Score=307.39 Aligned_cols=250 Identities=20% Similarity=0.321 Sum_probs=198.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+.||+|++|.||+|.+.........++++...........+.+.+|+.++++++|+||+++++++.. ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEEEec
Confidence 4689999999999997654333334455554443333556789999999999999999999998865 6789999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC--
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD-- 338 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~-- 338 (473)
++|+|.+++..... ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++..+....
T Consensus 78 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 78 PLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999999965432 56899999999999999999999999 9999999999999999999999999998764421
Q ss_pred ---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 339 ---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 339 ---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
.....++..|++||.+.+..++.++|||||||++|||++ |..||......+....+.. ....
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~------~~~~-------- 219 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK------EGER-------- 219 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh------cCCc--------
Confidence 112345678999999998889999999999999999998 9999976554432222210 0000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
...+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 220 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 220 --LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0112334578999999999999999999999999885
No 161
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.2e-39 Score=308.38 Aligned_cols=252 Identities=22% Similarity=0.373 Sum_probs=200.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..++||+|+||.||+|...++ +.+++|. +.........+.+|+.++++++|+||+++++++.. +..
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~----~~~a~K~--~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 75 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGH----TKVAIKS--LKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ---EPI 75 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCC----ceEEEEE--ecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEcc---CCc
Confidence 35788889999999999999986543 3344443 33333445789999999999999999999988643 578
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+.+++|.+++... .+..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++..
T Consensus 76 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 151 (260)
T cd05067 76 YIITEYMENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARL 151 (260)
T ss_pred EEEEEcCCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceee
Confidence 9999999999999998653 3457899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCCcc---CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETDIS---NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~~~---~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....... ...++..|+|||++.+..++.++||||||+++|||++ |..||............. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-------~~----- 219 (260)
T cd05067 152 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE-------RG----- 219 (260)
T ss_pred cCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH-------cC-----
Confidence 6432221 2234578999999988889999999999999999999 999998665433222111 00
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
.....+...+.++.+++.+||..+|++||++++++..|+.+
T Consensus 220 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 220 -----YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 00011233457899999999999999999999999999853
No 162
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=7.3e-39 Score=306.28 Aligned_cols=251 Identities=21% Similarity=0.426 Sum_probs=202.8
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+.||+|+||.||+|...........+++++............+.+|++++..++|+||+++++++... ...++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE--EPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC--CceEEEEEec
Confidence 46999999999999976542334455555554433333467899999999999999999999998774 7899999999
Q ss_pred cCCChhhhhhcCCC------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 261 FHGSLDRLIYGRSD------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 261 ~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
++++|.+++..... ...+++..+..++.|++.||+|||+++ ++|+||+|+||+++.++.+||+|||.+...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccc
Confidence 99999999965311 367999999999999999999999999 999999999999999999999999999877
Q ss_pred CCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 335 PETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 335 ~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
.... .....++..|+|||.+....++.++|||||||++|||++ |..||...........+.. .
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-------~----- 223 (262)
T cd00192 156 YDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-------G----- 223 (262)
T ss_pred ccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-------C-----
Confidence 5432 233456789999999988889999999999999999999 6999987644332222110 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
.....+..++.++.+++.+||..||.+|||+.++++.|+
T Consensus 224 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 -----YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -----CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 011224455788999999999999999999999999874
No 163
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-42 Score=313.33 Aligned_cols=247 Identities=20% Similarity=0.314 Sum_probs=207.0
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
|.+..+||+|+||.||+|.++. .+..++++.+.. ....++++.||.+|.++..+++|++||.+... ..+|+|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~E---sG~v~AIK~VPV---~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~--sDLWIV 106 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRE---SGHVLAIKKVPV---DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKH--SDLWIV 106 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhc---cCcEEEEEecCc---cchHHHHHHHHHHHHHcCCchhhhhhhhhccC--CceEee
Confidence 4445889999999999998544 444444444433 35678999999999999999999999988765 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
||||..|++.|+++.+ ..+|.+.++..++...+.||+|||... -||||||..||||+-+|.+||+|||+|..+..
T Consensus 107 MEYCGAGSiSDI~R~R--~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD 181 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRAR--RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTD 181 (502)
T ss_pred hhhcCCCcHHHHHHHh--cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhh
Confidence 9999999999999654 568999999999999999999999998 89999999999999999999999999988765
Q ss_pred CC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 337 TD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 337 ~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
.. .++..||+-|||||+++.-.|+.++||||||+...||..|++||.+.++......+. .+|.
T Consensus 182 TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP---------------T~PP 246 (502)
T KOG0574|consen 182 TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP---------------TKPP 246 (502)
T ss_pred hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc---------------CCCC
Confidence 53 356689999999999999999999999999999999999999998876544221111 1122
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..-.-|...+.++.+|++.||.+.|++|-|+-++++.
T Consensus 247 PTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 247 PTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 2223377889999999999999999999999988764
No 164
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-39 Score=340.00 Aligned_cols=260 Identities=16% Similarity=0.196 Sum_probs=206.2
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeec
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHAR 247 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~ 247 (473)
++....++|.+.+.||+|+||+||+|.... ..+.+++|+..... .......+.+|+.++..++|+||+++++.+..
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~ 102 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVS---DGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAK 102 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcC---CCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceec
Confidence 333445799999999999999999998543 34566677665543 33445678899999999999999999877654
Q ss_pred CCC------CceEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 248 DGS------DQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 248 ~~~------~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
... ..+++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.+
T Consensus 103 ~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~ 179 (496)
T PTZ00283 103 KDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSN 179 (496)
T ss_pred ccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCC
Confidence 321 13689999999999999986432 2456899999999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCCC----CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh
Q 011995 321 FSAKLSGYGCAGHIPET----DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW 396 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~----~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~ 396 (473)
+.+||+|||+++..... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||...........+..
T Consensus 180 ~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~ 259 (496)
T PTZ00283 180 GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA 259 (496)
T ss_pred CCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence 99999999998765422 12345789999999999998999999999999999999999999987654332221110
Q ss_pred cccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. ....++..++.++.+++.+||+.||.+||++.++++.
T Consensus 260 ~-----------------~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 260 G-----------------RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred C-----------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 0 0011244556889999999999999999999999864
No 165
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=8.9e-39 Score=308.45 Aligned_cols=254 Identities=21% Similarity=0.270 Sum_probs=191.8
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+.||+|+||.||+|.+.++. ....++++..+..........+.+|+.++++++||||+++++++.+. ...++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGY-TPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--TPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--CCcEEEEECC
Confidence 46899999999999875432 33444455544443344456789999999999999999999998765 7789999999
Q ss_pred cCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC
Q 011995 261 FHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD 338 (473)
Q Consensus 261 ~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~ 338 (473)
++|+|.+++..... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence 99999999965322 235678888999999999999999999 9999999999999999999999999987553332
Q ss_pred c----cCcccccccCChhhhhcC-------CCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 339 I----SNSSVAAANLSVETLERG-------LLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 339 ~----~~~~~t~~y~aPE~~~~~-------~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
. ....++..|+|||++.+. .++.++|||||||++|||++ |..||......+...... . . .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~-~----~---~ 226 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTV-R----E---Q 226 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHh-h----c---c
Confidence 1 123456789999998642 35789999999999999996 999997655433221110 0 0 0
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
.....++.+ ....+..+.+++.+|| .+|++|||+.+|++.|+
T Consensus 227 ~~~~~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 QLKLPKPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCCCCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 011111111 2234467889999999 68999999999998875
No 166
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=323.64 Aligned_cols=252 Identities=18% Similarity=0.206 Sum_probs=213.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~ 250 (473)
...|+..+.||+|.||.||+++... +++.+++|++.... .......+.+|+.+|+++. |||||.+++.+.+.
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~---tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~-- 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKS---TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP-- 108 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecC---CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC--
Confidence 4568888999999999999998544 46666777665442 2335578999999999998 99999999999877
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC----CcEEEe
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD----FSAKLS 326 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~----~~vkl~ 326 (473)
+.+++|||++.||.|.+.+... .+++..+..++.|++.++.|||+.+ |+||||||+|+|+... +.+|++
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~ 181 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLI 181 (382)
T ss_pred CeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEe
Confidence 7999999999999999999664 3999999999999999999999999 9999999999999533 579999
Q ss_pred ccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 327 GYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 327 DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
|||++...... .....+||+.|+|||++....|+..+||||+||++|.|++|.+||.+.........+.....
T Consensus 182 DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~------ 255 (382)
T KOG0032|consen 182 DFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF------ 255 (382)
T ss_pred eCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC------
Confidence 99999888653 45667999999999999999999999999999999999999999998876655543332211
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.......++..+.+||..|+..||.+|+|+.++|+.
T Consensus 256 --------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 --------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred --------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 22223345678999999999999999999999999995
No 167
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.6e-40 Score=331.89 Aligned_cols=258 Identities=17% Similarity=0.219 Sum_probs=191.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||+|+||.||+|.... +.+.+++|+. ....+.+|+++|++++|||||++++++... ...
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~---~~~~vaiK~~-------~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~ 158 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNK---TCEHVVIKAG-------QRGGTATEAHILRAINHPSIIQLKGTFTYN--KFT 158 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECC---CCCEEEEech-------hhhhhHHHHHHHHhCCCCCCCCEeEEEEEC--Cee
Confidence 3579999999999999999998543 3344445432 134578999999999999999999998765 788
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++|+|++. ++|..++.. ...+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||++..
T Consensus 159 ~lv~e~~~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~ 231 (391)
T PHA03212 159 CLILPRYK-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACF 231 (391)
T ss_pred EEEEecCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccc
Confidence 99999984 689888843 346899999999999999999999999 99999999999999999999999999975
Q ss_pred cCC---CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCCh-------HHHH-hHhhhccccc-
Q 011995 334 IPE---TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHP-------KEER-NLVKWSRPFL- 401 (473)
Q Consensus 334 ~~~---~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~-------~~~~-~~~~~~~~~~- 401 (473)
... .......+|+.|+|||++.+..++.++|||||||++|||++|..||..... .... .++.......
T Consensus 232 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~ 311 (391)
T PHA03212 232 PVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPN 311 (391)
T ss_pred cccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChh
Confidence 422 223345789999999999988999999999999999999999988753221 0111 1111000000
Q ss_pred ----cccccccc---------ccccccCCCC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 402 ----ADDCRLSL---------IMDPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 402 ----~~~~~~~~---------~~~~~l~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.....+.. ...+.....+ ....+.++.+|+.+||+.||.+|||+.|+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 312 EFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000 0000000000 1134668899999999999999999999985
No 168
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.7e-39 Score=314.29 Aligned_cols=246 Identities=17% Similarity=0.237 Sum_probs=192.3
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
||+|+||+||++.... ..+.+++|+..... .....+.+..|+++++.++|+||+++++++... ...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRA---TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK--TDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEcc---CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC--CeEEEEEeCC
Confidence 7999999999998543 33455555544321 222346678899999999999999999888765 7899999999
Q ss_pred cCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC-
Q 011995 261 FHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD- 338 (473)
Q Consensus 261 ~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~- 338 (473)
++|+|.+++... .....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++..+....
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 152 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS 152 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc
Confidence 999999887542 23456899999999999999999999999 9999999999999999999999999987654332
Q ss_pred -ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHH-hHhhhcccccccccccccccccccC
Q 011995 339 -ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER-NLVKWSRPFLADDCRLSLIMDPQLK 416 (473)
Q Consensus 339 -~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~ 416 (473)
.....+++.|+|||.+.+..++.++|||||||++|||++|+.||......... ..... +....
T Consensus 153 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-------------~~~~~-- 217 (280)
T cd05608 153 KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR-------------ILNDS-- 217 (280)
T ss_pred cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHh-------------hcccC--
Confidence 23346789999999999999999999999999999999999999764322111 11110 00000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 417 GRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 417 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
..++...+..+.+++.+||+.||++|| +++++++.
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 218 VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 122445668899999999999999999 77888764
No 169
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.3e-40 Score=327.43 Aligned_cols=252 Identities=16% Similarity=0.177 Sum_probs=199.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||++....+ .+.+++|+..... .......+.+|+.++..++|+||+++++++.+. +.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~--~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKAT---GDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK--DN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC--Ce
Confidence 4788899999999999999985443 3455566555321 233456788999999999999999999988765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred EEEEECCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCe
Confidence 99999999999999999543 346899999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCCCc---cCcccccccCChhhhh------cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 333 HIPETDI---SNSSVAAANLSVETLE------RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 333 ~~~~~~~---~~~~~t~~y~aPE~~~------~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
....... ....+|+.|+|||++. ...++.++|||||||++|||++|..||...........+.....
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~---- 226 (330)
T cd05601 151 RLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR---- 226 (330)
T ss_pred ECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC----
Confidence 6643322 2236789999999986 45678999999999999999999999987654433222211000
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+........+.++.+|+.+||. +|.+||++.++++.
T Consensus 227 ----------~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 ----------FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ----------ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 00000012356788999999997 99999999999863
No 170
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.5e-39 Score=314.85 Aligned_cols=260 Identities=21% Similarity=0.331 Sum_probs=203.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|+||+||++....+ ++.+++++............+.+|+++++.++||||+++++++... +.++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPT---GTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE--NNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCC---CcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC--CEEE
Confidence 4677779999999999999986543 3445555555444455567899999999999999999999999876 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+||||+++++|.+++.. ...+++..+..++.+++.+|.|||+ ++ ++|+||+|+||+++.++.++|+|||++..
T Consensus 80 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~ 153 (284)
T cd06620 80 MCMEFMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGE 153 (284)
T ss_pred EEEecCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccc
Confidence 99999999999998854 3468999999999999999999997 46 99999999999999999999999999876
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH-----HHhHhhhcccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE-----ERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 408 (473)
..........++..|+|||++.+..++.++|||||||++|||++|..||....... ......+.....
T Consensus 154 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 226 (284)
T cd06620 154 LINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV------- 226 (284)
T ss_pred hhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh-------
Confidence 54333344567899999999988889999999999999999999999998654321 111111111000
Q ss_pred cccccccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 409 LIMDPQLKGRFP-LKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 409 ~~~~~~l~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
... ...++ ...+.++.+|+.+||+.||++|||+.|+++...-+.
T Consensus 227 ---~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 227 ---QEP-PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred ---hcc-CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 000 00111 125578999999999999999999999998754333
No 171
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.9e-39 Score=319.77 Aligned_cols=265 Identities=17% Similarity=0.228 Sum_probs=198.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||+|+... ....+++|.............+.+|+.++++++|+||+++++++..+ +..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKL---TENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD--KSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecC---CCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC--CeEE
Confidence 568888999999999999998543 33445566555443344445678999999999999999999998766 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+.+ +|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 81 lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred EEEeCCCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceec
Confidence 99999965 888887543 345889999999999999999999999 999999999999999999999999998754
Q ss_pred CCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc--------ccc
Q 011995 335 PET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF--------LAD 403 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~--------~~~ 403 (473)
... ......++..|+|||.+.+ ..++.++|||||||++|||++|++||......+....+...... +..
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 155 SVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred CCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcc
Confidence 322 2233467889999999865 45889999999999999999999999876654433332211000 000
Q ss_pred ccccccccccccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 DCRLSLIMDPQLKG----RFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 ~~~~~~~~~~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.........+.... ......+.++.+++.+||+.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000000000 011235678899999999999999999999987
No 172
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3e-39 Score=310.09 Aligned_cols=250 Identities=16% Similarity=0.250 Sum_probs=199.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC----ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
++|...+.||+|++|.||+|...+ ..+.+++++...... ......+.+|++++++++||||+++++++.++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~---~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVD---TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD-- 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcC---CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC--
Confidence 578999999999999999998543 234455555443221 12245688999999999999999999999776
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+..++|+||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||+
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~ 150 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGA 150 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeccc
Confidence 799999999999999999854 245889999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCCc-----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 331 AGHIPETDI-----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 331 a~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
+........ ....++..|+|||.+.+..++.++|||||||++|||++|+.||.............
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~---------- 220 (263)
T cd06625 151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA---------- 220 (263)
T ss_pred ceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHh----------
Confidence 875532211 23356789999999998889999999999999999999999997654332221110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.......++...+..+.+++.+||..+|.+|||+.++++.
T Consensus 221 ------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 221 ------TQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ------ccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0001112344566789999999999999999999999864
No 173
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.8e-39 Score=313.01 Aligned_cols=255 Identities=20% Similarity=0.320 Sum_probs=201.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|+||.||++..... .+.++++.............+.+|++++.+++|+||+++++++..+ +..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPT---GVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE--GAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCC---CcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC--CeEE
Confidence 3677889999999999999986533 3445555554443444557899999999999999999999988776 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+||||+++++|..++........+++..+..++.|++.||.|||+. + |+|+||||+||+++.++.+||+|||++..
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 152 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGN 152 (286)
T ss_pred EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCccc
Confidence 9999999999999886533344789999999999999999999974 6 99999999999999999999999999876
Q ss_pred cCCCCccCcccccccCChhhhhcCC------CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGL------LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~------~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
..........++..|+|||.+.+.. ++.++|||||||++|||++|..||.............
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~------------ 220 (286)
T cd06622 153 LVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLS------------ 220 (286)
T ss_pred ccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHH------------
Confidence 6544444556778999999985543 4789999999999999999999997644322211111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.+. ....++..++.++.+|+.+||+.+|.+||++.+++..
T Consensus 221 -~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 221 -AIVDG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -HHhhc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 00000 0112344577889999999999999999999999974
No 174
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.2e-39 Score=322.29 Aligned_cols=248 Identities=18% Similarity=0.277 Sum_probs=191.5
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+.++..+ +||||+++++++.+. +.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~--~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKT---RRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE--SRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC--CEEEEEE
Confidence 4699999999999986543 3455666655321 233456688999999998 799999999998766 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC--
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP-- 335 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~-- 335 (473)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 76 e~~~~g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 149 (329)
T cd05588 76 EFVSGGDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP 149 (329)
T ss_pred eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC
Confidence 99999999988843 346999999999999999999999999 9999999999999999999999999987532
Q ss_pred CCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH--HHhHhhhccccccccccccccccc
Q 011995 336 ETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE--ERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 336 ~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
........+|..|+|||++.+..++.++|||||||++|||++|+.||....... ......+.. ..+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~---------~~~~~~ 220 (329)
T cd05588 150 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLF---------QVILEK 220 (329)
T ss_pred CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHH---------HHHHcC
Confidence 222334578999999999999899999999999999999999999996422111 000000000 000011
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPT------MRSIFE 450 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt------~~eil~ 450 (473)
. ..++..++.++.+++.+||+.||.+|++ ++++++
T Consensus 221 ~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 221 Q--IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred C--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 1 1124455678999999999999999997 667764
No 175
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.5e-39 Score=319.11 Aligned_cols=263 Identities=20% Similarity=0.345 Sum_probs=205.3
Q ss_pred cccccCcceeecCCceEEEEEECCCC----eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDA----STSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG 249 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~ 249 (473)
.+|.+.+.||+|+||.||+|...+.. .....+++++...........++.+|++++.++ +|+||+++++++...
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD- 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC-
Confidence 36888899999999999999753211 111233444433333344567899999999999 899999999998765
Q ss_pred CCceEEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCcee
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQ 316 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NIL 316 (473)
+..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+++ |+||||||+|||
T Consensus 91 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil 166 (334)
T cd05100 91 -GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVL 166 (334)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEE
Confidence 68899999999999999986532 1245889999999999999999999999 999999999999
Q ss_pred eCCCCcEEEeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHH
Q 011995 317 IDKDFSAKLSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEER 391 (473)
Q Consensus 317 l~~~~~vkl~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~ 391 (473)
++.++.+||+|||+++....... ....++..|+|||++.+..++.++|||||||++|||++ |..||.........
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 246 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246 (334)
T ss_pred EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 99999999999999876543221 11233467999999998889999999999999999998 88999776544432
Q ss_pred hHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 392 NLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
..+... .....+...+..+.+++.+||+.+|.+||++.++++.|+++....
T Consensus 247 ~~~~~~-----------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 247 KLLKEG-----------------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHcC-----------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 222100 000113344578999999999999999999999999999887444
No 176
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.4e-39 Score=307.25 Aligned_cols=250 Identities=19% Similarity=0.254 Sum_probs=202.5
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
+|+..+.||+|+||.||++.... ..+.++++..+........+.+.+|+.+++.++|+||+++++++.+. +.+++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVN---SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD--GHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcC---CCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC--CEEEE
Confidence 47788999999999999998543 34556666665544445567888999999999999999999998765 78999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++....
T Consensus 76 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 151 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLT 151 (255)
T ss_pred EEeeCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeec
Confidence 99999999999988543 3446889999999999999999999999 9999999999999999999999999987664
Q ss_pred CCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 336 ETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 336 ~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
... .....++..|+|||++.+..++.++||||||+++|+|++|..||...........+....
T Consensus 152 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~--------------- 216 (255)
T cd08219 152 SPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS--------------- 216 (255)
T ss_pred ccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC---------------
Confidence 322 223467788999999988889999999999999999999999998655433222111000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....+...+..+.+|+.+||+.||++||++.+|+..
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 --YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 001233456778999999999999999999999864
No 177
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9.3e-39 Score=308.20 Aligned_cols=254 Identities=22% Similarity=0.283 Sum_probs=189.0
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+.||+|+||.||+|...+.. ....++++.............+.+|+.+++.++|+||+++++++... ...++||||+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--~~~~lv~e~~ 77 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGM-SKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--IPYLLVLEFC 77 (269)
T ss_pred CcCCccCCceEEEEEEecCC-CCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--CceEEEEEeC
Confidence 35899999999999764432 22233344333333344456788999999999999999999998765 7899999999
Q ss_pred cCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC
Q 011995 261 FHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD 338 (473)
Q Consensus 261 ~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~ 338 (473)
++|+|.+++..... ...+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccch
Confidence 99999999965422 234578888999999999999999999 9999999999999999999999999986543221
Q ss_pred c----cCcccccccCChhhhhc-------CCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 339 I----SNSSVAAANLSVETLER-------GLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 339 ~----~~~~~t~~y~aPE~~~~-------~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
. ....++..|+|||++.. ..++.++|||||||++|||++ |..||......+....+... .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~--------~ 226 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE--------Q 226 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc--------c
Confidence 1 22234567999999753 346789999999999999999 78898765443322111100 0
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
...+..+ ..+...+..+.+++..|| .||++|||+.+|++.|.
T Consensus 227 ~~~~~~~----~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 227 DIKLPKP----QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CccCCCC----cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0011111 123345577888999999 59999999999999873
No 178
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=7.4e-39 Score=312.30 Aligned_cols=261 Identities=21% Similarity=0.370 Sum_probs=201.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCC--eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|++.+.||+|+||.||+|...+.. .....+++|.............+.+|+.+++.++|+||+++++++... +
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 82 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG--Q 82 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--C
Confidence 567889999999999999999765321 122344444433222233445688999999999999999999998765 6
Q ss_pred ceEEEEEeccCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEE
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSD-------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEE
Confidence 88999999999999999964321 234577888999999999999999999 99999999999999999999
Q ss_pred EeccCCCcccCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccc
Q 011995 325 LSGYGCAGHIPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 325 l~DFGla~~~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|+|||+++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||...........+.
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~---- 235 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM---- 235 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH----
Confidence 999999876543221 12234567999999998889999999999999999998 788997654433222111
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
.... ...+...+..+.+++.+||+.||.+|||+.++++.|++..
T Consensus 236 ---~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 ---DGGY----------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred ---cCCC----------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 0000 0112334578999999999999999999999999998753
No 179
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=9.1e-39 Score=305.37 Aligned_cols=250 Identities=19% Similarity=0.266 Sum_probs=201.6
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|...+.||+|+||.||+|....+. +.++++..... ........+.+|+++++.++||||+++++++... +..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADK---RVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK--GKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCC---cEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC--CEEE
Confidence 4777799999999999999875443 44445544432 2344567889999999999999999999998766 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 76 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~ 151 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLL 151 (256)
T ss_pred EEEEeCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceec
Confidence 999999999999999653 2457899999999999999999999998 999999999999999999999999998766
Q ss_pred CCCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... ....++..|+|||++.+..++.++|||||||++|||++|+.||...........+..
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---------------- 215 (256)
T cd08529 152 SDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR---------------- 215 (256)
T ss_pred cCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc----------------
Confidence 43321 233567899999999988899999999999999999999999987653332211110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....++...+..+.+++.+||+.+|++||++.++++.
T Consensus 216 -~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 216 -GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -CCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 00011223456789999999999999999999999864
No 180
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.2e-38 Score=309.15 Aligned_cols=259 Identities=20% Similarity=0.342 Sum_probs=205.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCee-eeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAST-SKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.+|+..+.||+|+||.||+|.+.++... ...+++++............+.+|+.++.+++|+||+++++++.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS---SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---Cce
Confidence 4677779999999999999987554322 233444444333334455788999999999999999999999875 678
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|||++..
T Consensus 84 ~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccc
Confidence 9999999999999999643 345899999999999999999999998 99999999999999999999999999976
Q ss_pred cCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
...... .....+..|++||.+....++.++|||||||++|||++ |..||......+....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------- 229 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER--------- 229 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC---------
Confidence 643221 11123467999999988889999999999999999998 9999987655443322221000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
...+..++..+.+++.+||..||.+||++.++++.|+++.+.
T Consensus 230 --------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 230 --------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 011223446789999999999999999999999999998653
No 181
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=9.7e-39 Score=305.63 Aligned_cols=251 Identities=22% Similarity=0.382 Sum_probs=201.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|+..+.||.|+||.||+|...+. .+++|.... .....+++.+|+.+++.++|+||+++++++... +..
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~-----~v~iK~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 75 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQ-----KVAVKCLKD--DSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG--NPL 75 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCc-----EEEEEEecc--chhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC--CCe
Confidence 35678889999999999999986532 333444332 223567899999999999999999999998764 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++..
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~ 151 (256)
T cd05039 76 YIVTEYMAKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKE 151 (256)
T ss_pred EEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccc
Confidence 99999999999999986532 236899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... .....+..|+|||.+.+..++.++||||||+++|||++ |..||...........+.. +
T Consensus 152 ~~~~~-~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-------~-------- 215 (256)
T cd05039 152 ASQGQ-DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK-------G-------- 215 (256)
T ss_pred ccccc-ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc-------C--------
Confidence 63322 23344568999999988889999999999999999997 9999976654332221110 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
.....+...+..+.+++.+||..+|++||++.++++.|+.+
T Consensus 216 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 216 --YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred --CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 00111234467899999999999999999999999999764
No 182
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3e-39 Score=321.29 Aligned_cols=249 Identities=17% Similarity=0.274 Sum_probs=190.8
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|....+ .+.+++|+.... ........+.+|+.++.++ +||||+++++++... +..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKT---ERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE--SRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCC---CCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC--CEEEEEE
Confidence 4699999999999986543 344556555432 2334456678899998877 899999999998776 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC-
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE- 336 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~- 336 (473)
||+++|+|..++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 76 E~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~ 149 (329)
T cd05618 76 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 149 (329)
T ss_pred eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCC
Confidence 99999999988843 346899999999999999999999999 99999999999999999999999999875422
Q ss_pred -CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH--HhHhhhccccccccccccccccc
Q 011995 337 -TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 337 -~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
.......+|..|+|||++.+..++.++|||||||++|||++|..||........ .....+.. ..+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~---------~~i~~~ 220 (329)
T cd05618 150 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF---------QVILEK 220 (329)
T ss_pred CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHH---------HHHhcC
Confidence 222345789999999999999999999999999999999999999953211100 00000000 000000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPT------MRSIFEE 451 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt------~~eil~~ 451 (473)
...++...+..+.+++.+||+.||.+||+ +.++++.
T Consensus 221 --~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 221 --QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred --CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 11234556688999999999999999998 4566543
No 183
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.1e-38 Score=306.01 Aligned_cols=252 Identities=22% Similarity=0.404 Sum_probs=201.7
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|.+.+.||+|+||.||+|...++ +.+++| .+.........+.+|+.+++.++|+||+++++++... ...
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~----~~~~vK--~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 76 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGT----TKVAVK--TLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE--EPI 76 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCC----ceEEEE--EecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecC--Cce
Confidence 46788899999999999999986543 223333 3333344567899999999999999999999988765 678
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++... .+..+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++..
T Consensus 77 ~~v~e~~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~ 152 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARL 152 (261)
T ss_pred EEEEeccCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECcccccee
Confidence 9999999999999999653 3456899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCCcc---CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 334 IPETDIS---NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 334 ~~~~~~~---~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
+...... ....+..|+|||.+.+..++.++|||||||++|||++ |+.||.+.........+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~------------ 220 (261)
T cd05034 153 IEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG------------ 220 (261)
T ss_pred ccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC------------
Confidence 6432211 2233568999999998889999999999999999998 99999765543322221110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.....+...+.++.+++.+||..+|.+||++.++++.|+.
T Consensus 221 -----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 221 -----YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0001122335789999999999999999999999999875
No 184
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.2e-39 Score=321.80 Aligned_cols=241 Identities=19% Similarity=0.205 Sum_probs=187.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHH-HHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~-~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||+||+|....+ .+.+++|+..... .......+..|.. +++.++|+||+++++++... +..|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~--~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAE---EKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--DKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCC---CCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC--CeEEEEE
Confidence 4699999999999986543 3445566554321 1222344455544 56788999999999988766 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC-
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE- 336 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~- 336 (473)
||+++|+|.+++.. ...+.+..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 76 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~ 149 (325)
T cd05602 76 DYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 149 (325)
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccC
Confidence 99999999999854 345788889999999999999999999 99999999999999999999999999875422
Q ss_pred -CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 337 -TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 337 -~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
.......+|+.|+|||++.+..++.++|||||||++|||++|..||...........+.. ..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~----------------~~- 212 (325)
T cd05602 150 NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN----------------KP- 212 (325)
T ss_pred CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh----------------CC-
Confidence 223345789999999999999999999999999999999999999987655443222110 00
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..++...+..+.+++.+||+.||.+|+++.+.+.
T Consensus 213 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 213 -LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred -cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 0112345678899999999999999999875443
No 185
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.5e-38 Score=305.74 Aligned_cols=259 Identities=19% Similarity=0.259 Sum_probs=204.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||+|.... .++.++++..+.. ........+.+|++++++++|+||+++++++... +.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~--~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLL---DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN--NE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcC---CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC--Ce
Confidence 678999999999999999998653 2344455544322 1233457789999999999999999999998776 78
Q ss_pred eEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.++||||+++|+|.+++... .....+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~ 153 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEecccee
Confidence 89999999999999988542 22456899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....... .....++..|+|||.+.+..++.++|||||||++|+|++|..||........ ...... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~----~~------ 222 (267)
T cd08224 154 RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCKKI----EK------ 222 (267)
T ss_pred eeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH-HHHhhh----hc------
Confidence 7654322 2234577889999999888899999999999999999999999965432110 111100 00
Q ss_pred ccccccCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 410 IMDPQLKGRFPL-KAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 410 ~~~~~l~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
......+. ..+..+.+++.+||..+|++|||+.+|++.|+++.
T Consensus 223 ----~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 223 ----CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ----CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00011122 55678999999999999999999999999999874
No 186
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.9e-39 Score=312.59 Aligned_cols=249 Identities=16% Similarity=0.224 Sum_probs=190.5
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
||+|+||.||++..... ++.++++...... .......+..|+++++.++||||+++++++..+ ...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~---~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~--~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNT---GKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK--THLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccC---CcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC--CeEEEEEecC
Confidence 79999999999986543 3445555443221 122334566799999999999999999988765 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC-c
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD-I 339 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~-~ 339 (473)
++++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||++....... .
T Consensus 76 ~g~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 151 (277)
T cd05607 76 NGGDLKYHIYNV-GERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI 151 (277)
T ss_pred CCCCHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCcee
Confidence 999999888543 2345899999999999999999999999 9999999999999999999999999987664332 2
Q ss_pred cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCC
Q 011995 340 SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419 (473)
Q Consensus 340 ~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 419 (473)
....++..|+|||++.+..++.++|||||||++|||++|..||...........+.. .... ..... .
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~--~~~~----------~~~~~-~ 218 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR--RTLE----------DEVKF-E 218 (277)
T ss_pred eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH--Hhhc----------ccccc-c
Confidence 334678899999999988899999999999999999999999976433211111100 0000 00000 0
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 420 PLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 420 ~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
....+.++.+++.+||+.||.+||+++|+++.+.
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 1235678899999999999999999977664433
No 187
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.8e-39 Score=322.13 Aligned_cols=237 Identities=20% Similarity=0.220 Sum_probs=186.6
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHH-HHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~-~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|....+ ++.+++|+..... .......+..|.. +++.++||||+++++++... +..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~--~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKAD---GKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA--DKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCC---CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC--CEEEEEE
Confidence 4699999999999986443 3455566554321 2223345555555 56789999999999988765 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC-
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE- 336 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~- 336 (473)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 76 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 149 (323)
T cd05575 76 DYVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH 149 (323)
T ss_pred cCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC
Confidence 99999999998853 346899999999999999999999999 99999999999999999999999999875422
Q ss_pred -CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 337 -TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 337 -~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
.......+|+.|+|||++.+..++.++|||||||++|||++|..||......+....+... .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~----------------~- 212 (323)
T cd05575 150 SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK----------------P- 212 (323)
T ss_pred CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC----------------C-
Confidence 2223456899999999999989999999999999999999999999876544332222100 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMR 446 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 446 (473)
..++...+..+.+++.+||+.||.+||++.
T Consensus 213 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 213 -LRLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -CCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 011233467899999999999999999985
No 188
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-40 Score=333.99 Aligned_cols=249 Identities=17% Similarity=0.255 Sum_probs=202.2
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
.+||+|+|-+||+|........+.+-.+++..+..+....++|..|+.+|+.|+|+|||++|.++.+....++.+|.|+|
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 67999999999999854443333333344444445667778999999999999999999999999887667799999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEeccCCCcccCCCCc
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLSGYGCAGHIPETDI 339 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~DFGla~~~~~~~~ 339 (473)
..|+|..|+.+ ...++...++.|++||+.||.|||++.| +|||||||.+||+|+.+ |.|||+|+|||........
T Consensus 126 TSGtLr~Y~kk---~~~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 126 TSGTLREYRKK---HRRVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred cCCcHHHHHHH---hccCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 99999999954 4468889999999999999999999986 59999999999999865 9999999999998877777
Q ss_pred cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH-HHhHhhhcccccccccccccccccccCCC
Q 011995 340 SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE-ERNLVKWSRPFLADDCRLSLIMDPQLKGR 418 (473)
Q Consensus 340 ~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 418 (473)
....|||.|||||.+. ..|+..+||||||+.++||+|+..||..-.... ....+.-... ...+..
T Consensus 202 ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiK----P~sl~k--------- 267 (632)
T KOG0584|consen 202 KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIK----PAALSK--------- 267 (632)
T ss_pred ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCC----HHHhhc---------
Confidence 7789999999999997 789999999999999999999999997644332 2222211100 001112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 419 FPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 419 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
--.+++++||.+||.. .++|+|+.|+|+.
T Consensus 268 ---V~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 268 ---VKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ---cCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 1236789999999999 9999999999863
No 189
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=327.94 Aligned_cols=248 Identities=23% Similarity=0.313 Sum_probs=204.4
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
|...+.||.|+||.||.|+ +..+...+++|...... +......++.|+..|.+++|||+|.+-|+|..+ ...|
T Consensus 28 f~dLrEIGHGSFGAVYfAr---d~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre--~TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFAR---DVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE--HTAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEee---ccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc--chHH
Confidence 6666899999999999998 44444555565554432 344567899999999999999999999999877 7889
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
|||||| -||-.|+|.- ...++-+..+..|..+.++||+|||+++ .||||||..||||++.|.|||+|||.|...
T Consensus 103 LVMEYC-lGSAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 103 LVMEYC-LGSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIM 176 (948)
T ss_pred HHHHHH-hccHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhc
Confidence 999999 5688888743 4567999999999999999999999999 999999999999999999999999998776
Q ss_pred CCCCccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 335 PETDISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 335 ~~~~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
. ...+++|||.|||||++. .+.|+-++||||||++..||...++|+...+......-|....
T Consensus 177 ~--PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe------------- 241 (948)
T KOG0577|consen 177 A--PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE------------- 241 (948)
T ss_pred C--chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-------------
Confidence 3 346789999999999984 5779999999999999999999999998877655433222111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
.|.+. ....+..+++|+..||++-|.+|||.+++++.--
T Consensus 242 sPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 242 SPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRF 280 (948)
T ss_pred CCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcch
Confidence 11121 3577899999999999999999999999987543
No 190
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.2e-39 Score=319.47 Aligned_cols=241 Identities=18% Similarity=0.231 Sum_probs=192.0
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCc
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~ 252 (473)
+|+..+.||+|+||.||+|.... ..+.+++|+..... .......+..|+.++..+. |++|+++++++... +.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV--DR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC--CE
Confidence 46777999999999999998544 34455666654321 2334566788999998885 56778888887765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~ 149 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred EEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEecccccc
Confidence 9999999999999999853 346899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HIPET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
..... ......+|+.|+|||++.+..++.++|||||||++|||++|..||...........+...
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------------- 216 (323)
T cd05615 150 EHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH------------- 216 (323)
T ss_pred ccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------
Confidence 54322 223446889999999999888999999999999999999999999876544332222110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM 445 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 445 (473)
...++...+.++.+++.+||+.||.+|++.
T Consensus 217 -----~~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 217 -----NVSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -----CCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 011234456788999999999999999984
No 191
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.7e-39 Score=310.46 Aligned_cols=253 Identities=21% Similarity=0.303 Sum_probs=196.7
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC--
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG-- 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~-- 249 (473)
+++.|+..+.||+|+||.||+|...+.. ..+++++... .......+.+|+.++.++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~---~~~aik~~~~--~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTG---QLAAIKVMDV--TGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCC---cEEEEEEEEc--CCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 4567888899999999999999865433 3444554433 233456788999999998 7999999999987542
Q ss_pred --CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 250 --SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 250 --~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
....++||||+.+++|.+++... ....+++..+..++.|++.||+|||+++ |+|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEcc
Confidence 24689999999999999998653 2456899999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccCCC--CccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc
Q 011995 328 YGCAGHIPET--DISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF 400 (473)
Q Consensus 328 FGla~~~~~~--~~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 400 (473)
||++...... ......++..|+|||++. +..++.++|||||||++|||++|..||..............
T Consensus 155 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~---- 230 (272)
T cd06637 155 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---- 230 (272)
T ss_pred CCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc----
Confidence 9998765332 223346788999999986 33578899999999999999999999976543332211110
Q ss_pred cccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. ..+.. .....+..+.+|+.+||..||.+|||+.++++
T Consensus 231 ---~------~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 ---N------PAPRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ---C------CCCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 00000 12234567899999999999999999999985
No 192
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-38 Score=326.87 Aligned_cols=259 Identities=17% Similarity=0.248 Sum_probs=191.3
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|.+.+.||+|+||.||+|...... ..+++|.. ....+.+|+++|++++|+|||++++++... +..+
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~---~~vavK~~-------~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~--~~~~ 236 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYP---QRVVVKAG-------WYASSVHEARLLRRLSHPAVLALLDVRVVG--GLTC 236 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCC---CEEEEecc-------cccCHHHHHHHHHHCCCCCCCcEEEEEEEC--CEEE
Confidence 36888999999999999999865432 33334421 234567899999999999999999998776 7889
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|||++ .++|.+++... ...+++..++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++..
T Consensus 237 lv~e~~-~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~ 310 (461)
T PHA03211 237 LVLPKY-RSDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFA 310 (461)
T ss_pred EEEEcc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceec
Confidence 999999 46898888542 346999999999999999999999999 999999999999999999999999999765
Q ss_pred CCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCC--------hHHHHhHhhhcccccc
Q 011995 335 PETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRH--------PKEERNLVKWSRPFLA 402 (473)
Q Consensus 335 ~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~--------~~~~~~~~~~~~~~~~ 402 (473)
.... .....+|..|+|||++.+..++.++|||||||++|||++|..++.... ......++.+......
T Consensus 311 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~ 390 (461)
T PHA03211 311 RGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVD 390 (461)
T ss_pred ccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccc
Confidence 4321 123468999999999999899999999999999999999876553221 1112222222211100
Q ss_pred ccc-----ccc-c-------cccccc-CCCCC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 403 DDC-----RLS-L-------IMDPQL-KGRFP--LKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 403 ~~~-----~~~-~-------~~~~~l-~~~~~--~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.-. .+. . ...+.. ...+. ...+.++.+||.+||+.||.+|||+.|+|+.
T Consensus 391 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 391 EFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 000 0 000000 00000 1234578899999999999999999999975
No 193
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.7e-39 Score=326.64 Aligned_cols=264 Identities=17% Similarity=0.230 Sum_probs=208.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-C-----CCcccceeeeecC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-H-----PNLCKLLGFHARD 248 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-H-----pnIv~l~g~~~~~ 248 (473)
-+|++.+.||+|+||.|-+|. +..+...+|+|+++.+ ..-..+...|+.+|..++ | -|+|++++||...
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~---d~~T~e~VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAY---DHKTGEIVAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred EEEEEEEEecccccceeEEEE---ecCCCcEEEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 378899999999999999998 4456667777776643 344566778999999996 4 3899999999877
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC--CcEEEe
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD--FSAKLS 326 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~--~~vkl~ 326 (473)
+++|||+|.+ ..+|.++|..+ ....|+...+..|+.||+.||.+||..+ |||+||||+||||.+- ..+||+
T Consensus 261 --~HlciVfELL-~~NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVI 333 (586)
T KOG0667|consen 261 --NHLCIVFELL-STNLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVI 333 (586)
T ss_pred --cceeeeehhh-hhhHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEE
Confidence 8999999999 45999999765 3556999999999999999999999999 9999999999999643 479999
Q ss_pred ccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc---------
Q 011995 327 GYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS--------- 397 (473)
Q Consensus 327 DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~--------- 397 (473)
|||.+++....-+ ....+..|.|||++.|..|+.+.||||||||+.||++|.+.|.+.++.++...+...
T Consensus 334 DFGSSc~~~q~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL 412 (586)
T KOG0667|consen 334 DFGSSCFESQRVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKML 412 (586)
T ss_pred ecccccccCCcce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9999998766554 677889999999999999999999999999999999999999999887766554210
Q ss_pred ------cccccc-cccc-----cc--------------------cccc-c---cCCCCCHHHHHHHHHHHHHhcccCCCC
Q 011995 398 ------RPFLAD-DCRL-----SL--------------------IMDP-Q---LKGRFPLKAARTVADIALRCLQKEPSE 441 (473)
Q Consensus 398 ------~~~~~~-~~~~-----~~--------------------~~~~-~---l~~~~~~~~~~~l~~li~~cl~~dP~~ 441 (473)
..+... .... .. ...| . +...+.......+.+|+.+||..||.+
T Consensus 413 ~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~ 492 (586)
T KOG0667|consen 413 DTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAE 492 (586)
T ss_pred HhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchh
Confidence 111111 0000 00 0001 0 001112244567899999999999999
Q ss_pred CCCHHHHHHH
Q 011995 442 RPTMRSIFEE 451 (473)
Q Consensus 442 RPt~~eil~~ 451 (473)
|+|+.+.|+.
T Consensus 493 R~tp~qal~H 502 (586)
T KOG0667|consen 493 RITPAQALNH 502 (586)
T ss_pred cCCHHHHhcC
Confidence 9999999874
No 194
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.1e-39 Score=311.39 Aligned_cols=244 Identities=20% Similarity=0.377 Sum_probs=187.2
Q ss_pred ceeecCCceEEEEEECCCC-------------------eeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhCCCCCcccc
Q 011995 182 CISEGLSSVMYRASFGDDA-------------------STSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKL 241 (473)
Q Consensus 182 ~lG~G~~g~Vy~~~~~~~~-------------------~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l 241 (473)
.||+|+||.||+|.+.... .......++++.+... ......+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 6999999999999863211 1122334555555432 2234578889999999999999999
Q ss_pred eeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC
Q 011995 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF 321 (473)
Q Consensus 242 ~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~ 321 (473)
++++... ...++||||+++|+|..++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++
T Consensus 82 ~~~~~~~--~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 82 HGVCVRG--SENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEeC--CceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccC
Confidence 9999876 788999999999999998854 2346899999999999999999999998 99999999999997643
Q ss_pred -------cEEEeccCCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHH-HcCCCCCCCCChHHHHh
Q 011995 322 -------SAKLSGYGCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLEL-LTGRKNLDSRHPKEERN 392 (473)
Q Consensus 322 -------~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~el-ltG~~p~~~~~~~~~~~ 392 (473)
.+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++||| ++|..||......+...
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~ 232 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR--EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER 232 (274)
T ss_pred cccCccceeeecCCccccccccc--cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 3899999987644222 22346778999998865 4589999999999999998 57999997654433222
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
..... .. ++......+.++|.+||+.+|++|||+.+|++.|.
T Consensus 233 ~~~~~---------------~~----~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 233 FYEKK---------------HR----LPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHhc---------------cC----CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11100 00 11122357899999999999999999999999873
No 195
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.2e-39 Score=349.05 Aligned_cols=264 Identities=16% Similarity=0.180 Sum_probs=202.3
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
...++|.+.+.||+|+||+||+|.... ....+++++..... .......|..|+.+|..++|||||+++++|.....
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~---tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKR---TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECC---CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence 445789999999999999999998654 34455555554432 33445778999999999999999999998876555
Q ss_pred CceEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCC----CceeecCCCCCceeeCC------
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGP----FQAMYNEFSTANIQIDK------ 319 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~----~~ivHrDlkp~NILl~~------ 319 (473)
..+||||||+++|+|.++|.... ....+++..++.|+.||+.||.|||..+. ..||||||||+||||+.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 77999999999999999986422 23569999999999999999999998541 13999999999999964
Q ss_pred -----------CCcEEEeccCCCcccCCCCc-cCcccccccCChhhhhc--CCCCCcCCchHHHHHHHHHHcCCCCCCCC
Q 011995 320 -----------DFSAKLSGYGCAGHIPETDI-SNSSVAAANLSVETLER--GLLTPKSNVWSFGIVLLELLTGRKNLDSR 385 (473)
Q Consensus 320 -----------~~~vkl~DFGla~~~~~~~~-~~~~~t~~y~aPE~~~~--~~~s~~sDvwSlGvvl~elltG~~p~~~~ 385 (473)
.+.+||+|||++..+..... ....+|+.|+|||++.+ ..++.++||||||||||||++|..||...
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 34589999999987643322 34468999999999864 45889999999999999999999999765
Q ss_pred ChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHhh
Q 011995 386 HPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE--ELDRQ 455 (473)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~--~L~~l 455 (473)
............. +.+. ....+.++.+||..||+.+|.+||++.++|. .+..+
T Consensus 247 ~~~~qli~~lk~~--------------p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 247 NNFSQLISELKRG--------------PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CcHHHHHHHHhcC--------------CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 4333211110000 0000 1123578999999999999999999999994 44433
No 196
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.3e-38 Score=310.32 Aligned_cols=252 Identities=20% Similarity=0.267 Sum_probs=197.5
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
|+..+.||.|+||+||+|....+ .+.++++...... .......+.+|+++++.++|+||+.+++++..+ +..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRAT---GKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK--DALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCC---CcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC--CEEE
Confidence 56678999999999999986543 3445555443321 122345578899999999999999999888765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...
T Consensus 77 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKI 152 (285)
T ss_pred EEEEeccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceec
Confidence 999999999999888643 2346999999999999999999999999 999999999999999999999999998655
Q ss_pred CCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 335 PET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 335 ~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
... ......++..|+|||.+.+..++.++|+|||||++|||++|..||...........+.... ...
T Consensus 153 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~--~~~---------- 220 (285)
T cd05632 153 PEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRV--LET---------- 220 (285)
T ss_pred CCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh--hcc----------
Confidence 332 2234567899999999998889999999999999999999999998765433222221100 000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPT-----MRSIFEE 451 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 451 (473)
...++...+..+.+|+..||+.||++||+ +.++++.
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 221 --EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 01123345677899999999999999999 6677764
No 197
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.2e-39 Score=321.76 Aligned_cols=240 Identities=18% Similarity=0.179 Sum_probs=188.4
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHH-HHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~-~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|.... .++.+++|+..... .......+..|.. +++.++||||+++++++..+ +..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~--~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKL---DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT--EKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC--CEEEEEE
Confidence 469999999999998543 34455666654321 2233455666665 46778999999999988765 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC-
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE- 336 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~- 336 (473)
||+++|+|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 76 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~ 149 (325)
T cd05604 76 DFVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ 149 (325)
T ss_pred cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC
Confidence 99999999988843 346899999999999999999999999 99999999999999999999999999875422
Q ss_pred -CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 337 -TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 337 -~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
.......+++.|+|||++.+..++.++|||||||++|||++|..||...........+... ..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~--------------~~-- 213 (325)
T cd05604 150 SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK--------------PL-- 213 (325)
T ss_pred CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC--------------Cc--
Confidence 2233456889999999999999999999999999999999999999876544432222100 00
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMRSIF 449 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil 449 (473)
.++...+..+.+++.+||+.||.+||++++.+
T Consensus 214 --~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 214 --VLRPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred --cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 01223457788999999999999999886433
No 198
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.2e-38 Score=313.18 Aligned_cols=259 Identities=19% Similarity=0.348 Sum_probs=201.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||.||+|.+..+.. ....+++++...........++.+|+.+++.++|+||++++|++.. ...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~---~~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS---PTI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC---CCc
Confidence 456777999999999999998754332 2233344443322233334578899999999999999999999864 346
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++++||+++|+|.+++... ...+++..+..++.|++.||.|||+++ |+|+||||+|||++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeeehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccc
Confidence 7999999999999998543 345899999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCc----cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPETDI----SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~~----~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
...... ....++..|++||.+.+..++.++|||||||++|||++ |..||.+.........+.... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------~~- 230 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-------RL- 230 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-------CC-
Confidence 643221 12234678999999988889999999999999999997 999997654433322221100 00
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
..+..++..+.+++..||..+|++||++.++++.|.++...
T Consensus 231 ---------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 231 ---------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01223446789999999999999999999999999987543
No 199
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1e-38 Score=308.71 Aligned_cols=259 Identities=18% Similarity=0.302 Sum_probs=201.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCe--eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.+|+....||+|+||.||+|+...... ..+.++++.............+.+|++++++++|+||+++++++.+. +.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA--EP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC--Cc
Confidence 468888999999999999999754332 22334444433222223457799999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDG------PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
.++||||+++|+|.+++...... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEc
Confidence 89999999999999999654321 26899999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccc
Q 011995 327 GYGCAGHIPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 327 DFGla~~~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
|||++....... .....++..|++||.+.+..++.++||||||+++|+|++ |..||...........+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~------ 233 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA------ 233 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc------
Confidence 999986543222 223355678999999988889999999999999999998 8889965443322211110
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
..+....+..++..+.+++.+||+.||.+||++.++++.|.+
T Consensus 234 ----------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 234 ----------GKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred ----------CCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 000001122345789999999999999999999999998863
No 200
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.9e-39 Score=324.90 Aligned_cols=259 Identities=14% Similarity=0.150 Sum_probs=199.9
Q ss_pred HHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeee
Q 011995 168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFH 245 (473)
Q Consensus 168 ~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~ 245 (473)
.++....++|+..+.||+|+||.||++....+ .+.+++|+.... ........+.+|+.++..++||||+++++++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~ 112 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 112 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCC---CcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 34445568999999999999999999986543 345556654421 1223345678899999999999999999988
Q ss_pred ecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEE
Q 011995 246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 325 (473)
Q Consensus 246 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl 325 (473)
..+ ..+++||||+++|+|.+++.. ..++...+..++.||+.||+|||+++ |+||||||+|||++.++.+||
T Consensus 113 ~~~--~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL 183 (371)
T cd05622 113 QDD--RYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKL 183 (371)
T ss_pred EcC--CEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEE
Confidence 765 789999999999999999843 24888999999999999999999999 999999999999999999999
Q ss_pred eccCCCcccCCCC---ccCcccccccCChhhhhcC----CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc
Q 011995 326 SGYGCAGHIPETD---ISNSSVAAANLSVETLERG----LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 326 ~DFGla~~~~~~~---~~~~~~t~~y~aPE~~~~~----~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 398 (473)
+|||++....... .....+|+.|||||++.+. .++.++|||||||++|||++|..||...........+....
T Consensus 184 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~ 263 (371)
T cd05622 184 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 263 (371)
T ss_pred EeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence 9999997664322 2345689999999999654 37899999999999999999999998765543322221100
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHH
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE--RPTMRSIFEEL 452 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~L 452 (473)
. .+........+..+.++|..||..++.+ |+++.+|++..
T Consensus 264 ~--------------~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 264 N--------------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred C--------------cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 0 0000012245688999999999844433 78999988854
No 201
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.3e-39 Score=310.78 Aligned_cols=271 Identities=21% Similarity=0.270 Sum_probs=204.6
Q ss_pred ccccCcceeecCCceEEEEEECCC-CeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDD-ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.|...+.||+|+||.||+|.+... ....+.+++++............|.+|+++++.++|+||+++++++...+....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 466669999999999999987543 3344556666554332223467899999999999999999999998875557899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 85 lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 999999999999999643 235899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCcc-----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc--cccccc
Q 011995 335 PETDIS-----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL--ADDCRL 407 (473)
Q Consensus 335 ~~~~~~-----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~ 407 (473)
...... ....+..|++||.+.+..++.++|||||||++|||++|..|+......... +..+.. .....+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~ 235 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR----MIGIAQGQMIVTRL 235 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc----ccccccccccHHHH
Confidence 532111 123345699999998888999999999999999999999998653221100 000000 000000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
...+........+..++.++.+++.+||+.+|.+|||+.||++.|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 001111111112334457899999999999999999999999999876
No 202
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.7e-38 Score=301.29 Aligned_cols=245 Identities=20% Similarity=0.358 Sum_probs=194.0
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+.||.|+||.||+|...++ ..+++++............+.+|++++..++||||+++++++... +..++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~~~----~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDK----TPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR--QPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEecCC----cEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--CccEEEEECC
Confidence 3689999999999986543 233444433322333445788999999999999999999998766 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCcc
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIS 340 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 340 (473)
++++|.+++... ...+++..+..++.+++.+|.|||+++ ++|+||||+||+++.++.+||+|||++.........
T Consensus 75 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 149 (250)
T cd05085 75 PGGDFLSFLRKK--KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS 149 (250)
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccc
Confidence 999999998543 345899999999999999999999999 999999999999999999999999998754332211
Q ss_pred ---CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccccccC
Q 011995 341 ---NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416 (473)
Q Consensus 341 ---~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 416 (473)
....+..|+|||++.+..++.++||||||+++|||++ |..||...........+.. . ..
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~-------~----------~~ 212 (250)
T cd05085 150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK-------G----------YR 212 (250)
T ss_pred cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-------C----------CC
Confidence 1233567999999998889999999999999999998 9999977654433222210 0 01
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 417 GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 417 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
..++..++..+.+++.+||..+|++||++.++++.|.
T Consensus 213 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 213 MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 1123345678999999999999999999999999885
No 203
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-38 Score=310.59 Aligned_cols=267 Identities=17% Similarity=0.205 Sum_probs=194.7
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhC---CCCCcccceeeeecC---
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASL---QHPNLCKLLGFHARD--- 248 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~~~--- 248 (473)
+|+..+.||+|+||.||+|...++ .+.+++|....... ......+.+|++++..+ +||||+++++++...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHS---GHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCC---CcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC
Confidence 477889999999999999986543 34555555544322 22234566777777665 799999999987642
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
.....++||||+. ++|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 78 ~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 78 RETKVTLVFEHVD-QDLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred CCceEEEEEcccc-cCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcc
Confidence 2256899999997 4888888543 2345899999999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh-hhccccccccc-
Q 011995 329 GCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV-KWSRPFLADDC- 405 (473)
Q Consensus 329 Gla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~- 405 (473)
|++....... .....++..|+|||++.+..++.++|||||||++|||++|.+||...........+ .+.........
T Consensus 153 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 153 GLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred CccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 9998664332 23446788999999999888999999999999999999999999776544332211 11100000000
Q ss_pred ---cc-ccccccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 ---RL-SLIMDPQLK---GRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 ---~~-~~~~~~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.. .....+... ..+...++..+.+++.+||+.||.+|||+.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 000000000 0111245677899999999999999999999985
No 204
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9.8e-39 Score=321.49 Aligned_cols=267 Identities=15% Similarity=0.194 Sum_probs=197.1
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC-
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS- 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~- 250 (473)
..++|+..+.||+|+||.||++.... .++.+++|+.... ........+.+|+.+++.++||||+++++++...+.
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 95 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTV---LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcC---CCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc
Confidence 45789999999999999999998533 3455556655432 233445678899999999999999999998865421
Q ss_pred ---CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 251 ---DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 251 ---~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
..+|+||||+.+ +|.+.+.. .+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 96 EEFQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred cccceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEec
Confidence 357999999965 67666632 3788999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc--cc-----
Q 011995 328 YGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS--RP----- 399 (473)
Q Consensus 328 FGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~----- 399 (473)
||++...... ......+|..|+|||.+.+..++.++|||||||++|||++|+.||.+.+.......+... .+
T Consensus 167 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 167 FGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred CCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 9999765333 223457789999999999989999999999999999999999999876543221111000 00
Q ss_pred ---------ccccccc-----ccccccc-cc--CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 400 ---------FLADDCR-----LSLIMDP-QL--KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 400 ---------~~~~~~~-----~~~~~~~-~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+...... ....... .. ........+..+.+|+.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 0000000 00 000112235678999999999999999999999985
No 205
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.4e-39 Score=308.01 Aligned_cols=254 Identities=21% Similarity=0.266 Sum_probs=196.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.++|++.+.||+|+||.||+|....+ .+.+++++.... .......+.+|+.++..++|+||+++++++... +..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~---~~~~aik~~~~~-~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~--~~~ 81 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHT---GELAAVKIIKLE-PGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR--EKL 81 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCC---CeEEEEEEEecC-ccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--CEE
Confidence 35788899999999999999986443 334445554433 223345678999999999999999999998766 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++..
T Consensus 82 ~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~ 155 (267)
T cd06646 82 WICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAK 155 (267)
T ss_pred EEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCcccee
Confidence 999999999999998853 246899999999999999999999998 99999999999999999999999999876
Q ss_pred cCCCC--ccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 334 IPETD--ISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 334 ~~~~~--~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
..... .....++..|+|||.+. ...++.++|||||||++|||++|+.||............ .. .
T Consensus 156 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~--~~---------~ 224 (267)
T cd06646 156 ITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM--SK---------S 224 (267)
T ss_pred ecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee--ec---------C
Confidence 54322 22345778999999984 344788999999999999999999999654332211100 00 0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
....+... .....+..+.+++.+||..||++||++++|++.|
T Consensus 225 ~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 225 NFQPPKLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCCCCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00011111 1223457899999999999999999999998754
No 206
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8e-39 Score=323.70 Aligned_cols=266 Identities=17% Similarity=0.246 Sum_probs=196.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC---C
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS---D 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~---~ 251 (473)
+|+..+.||+|+||.||++.... .++.+++|+.... ......+.+.+|+++++.++|+||+++++++..... .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 77 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPR---DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFE 77 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECC---CCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccc
Confidence 47788999999999999998543 3344455544322 122345678899999999999999999999876521 2
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 78 EIYVVTELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred eEEEEeeccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccce
Confidence 6899999996 588887743 346899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC---ccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc--ccccc-
Q 011995 332 GHIPETD---ISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP--FLADD- 404 (473)
Q Consensus 332 ~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~- 404 (473)
....... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||...........+..... ...+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 151 RVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred eecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 7653322 2234568899999999774 478999999999999999999999987765544333221100 00000
Q ss_pred ----cccccc----ccc-ccC--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 405 ----CRLSLI----MDP-QLK--GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 405 ----~~~~~~----~~~-~l~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....+ ..+ ... ..+....+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000 000 000 01122346788999999999999999999999874
No 207
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8e-39 Score=321.62 Aligned_cols=268 Identities=15% Similarity=0.198 Sum_probs=199.0
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC-
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG- 249 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~- 249 (473)
...++|+..+.||+|+||.||++... ...+.+++|+..... .......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 90 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDA---VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKS 90 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEec---CCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccc
Confidence 45678999999999999999999843 344555565544322 3334567889999999999999999999876432
Q ss_pred ---CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 250 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
....++||||+++ +|.+.+.. .+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+
T Consensus 91 ~~~~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 91 LEEFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred ccccceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEe
Confidence 1357999999965 67776632 4788999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc--------
Q 011995 327 GYGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS-------- 397 (473)
Q Consensus 327 DFGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~-------- 397 (473)
|||+++...... .....+|..|+|||++.+..++.++|||||||++|||++|+.||.+.........+...
T Consensus 162 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 162 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred eCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999998654332 23456789999999999888999999999999999999999999876543322111000
Q ss_pred --------cccccccccccccccccc--------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 398 --------RPFLADDCRLSLIMDPQL--------KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 398 --------~~~~~~~~~~~~~~~~~l--------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..+.........+..+.. ........+..+.+|+.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000000000000 001122345678999999999999999999999985
No 208
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.2e-38 Score=307.17 Aligned_cols=252 Identities=23% Similarity=0.387 Sum_probs=196.7
Q ss_pred cceeecCCceEEEEEECCCC---eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDA---STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|+..+.. ...+.++++.............+.+|+.+++.++||||+++++++... +..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN--EPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC--CCeEEEE
Confidence 46999999999999875432 112333444333222234567889999999999999999999998765 6799999
Q ss_pred EeccCCChhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-----cEEEecc
Q 011995 258 ERLFHGSLDRLIYGRS----DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF-----SAKLSGY 328 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-----~vkl~DF 328 (473)
||+++++|.+++.... ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+||
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999999999996432 2245789999999999999999999998 99999999999999877 8999999
Q ss_pred CCCcccCCCCcc----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccc
Q 011995 329 GCAGHIPETDIS----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 329 Gla~~~~~~~~~----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
|++......... ....+..|+|||++.++.++.++|||||||++|||++ |..||......+....+..
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~------- 228 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA------- 228 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc-------
Confidence 998765433221 2234578999999999999999999999999999998 9999976554332222110
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
.. ....+...+..+.+++.+||..+|.+||++.+|++.|++
T Consensus 229 ~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 229 GG----------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CC----------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00 011233456789999999999999999999999999874
No 209
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.6e-39 Score=325.76 Aligned_cols=250 Identities=16% Similarity=0.224 Sum_probs=195.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|+..+.||+|+||.||++..... .+.+++|+.+... .......+.+|+.++..++|+||+++++.+.+. +.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~--~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDT---GHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK--RN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCC---CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--CE
Confidence 4688889999999999999986543 3455566554321 233456788899999999999999999988765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+||||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred EEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCc
Confidence 9999999999999999853 346899999999999999999999999 9999999999999999999999999986
Q ss_pred ccCCCC-------------------------------------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHH
Q 011995 333 HIPETD-------------------------------------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLEL 375 (473)
Q Consensus 333 ~~~~~~-------------------------------------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~el 375 (473)
.+.... .....||+.|+|||++.+..++.++|||||||++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel 229 (360)
T cd05627 150 GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229 (360)
T ss_pred ccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeec
Confidence 442110 1134688999999999999999999999999999999
Q ss_pred HcCCCCCCCCChHHHHhHhh-hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 011995 376 LTGRKNLDSRHPKEERNLVK-WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT---MRSIFEE 451 (473)
Q Consensus 376 ltG~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~eil~~ 451 (473)
++|..||...........+. |.... .... ....+.++.+++.+|+ .||.+|++ +.++++.
T Consensus 230 ~tG~~Pf~~~~~~~~~~~i~~~~~~~-------------~~p~--~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 230 LIGYPPFCSETPQETYRKVMNWKETL-------------VFPP--EVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCCce-------------ecCC--CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 99999998766544332221 11000 0000 1124578889998876 49999985 6666654
No 210
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-39 Score=323.01 Aligned_cols=262 Identities=20% Similarity=0.323 Sum_probs=216.8
Q ss_pred CcCCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcc
Q 011995 162 LRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLC 239 (473)
Q Consensus 162 ~~~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv 239 (473)
...++.++|... ++||+|.||+|++|.|.. ..++.+.|+||.+.. -......|++|+.+|.+|+|+|+|
T Consensus 104 kclIpee~i~l~-------e~LG~GsFgvV~rg~Wt~--psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hli 174 (1039)
T KOG0199|consen 104 KCLIPEEQIKLY-------ELLGEGSFGVVKRGTWTQ--PSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLI 174 (1039)
T ss_pred ceeccHHHHHHH-------HHhcCcceeeEeeccccC--CCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCccee
Confidence 344677777665 899999999999999976 344555566665553 334678999999999999999999
Q ss_pred cceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 240 ~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
+|||+..+ ...+||||+++.|||.+.|+. .....|-......++.|||.||.||..++ +|||||...|+||..
T Consensus 175 RLyGvVl~---qp~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllas 247 (1039)
T KOG0199|consen 175 RLYGVVLD---QPAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLAS 247 (1039)
T ss_pred EEeeeecc---chhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecc
Confidence 99999875 568899999999999999987 34567888899999999999999999999 999999999999999
Q ss_pred CCcEEEeccCCCcccCCCCcc-----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhH
Q 011995 320 DFSAKLSGYGCAGHIPETDIS-----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNL 393 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~~~-----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~ 393 (473)
...|||+||||.+-+..++.. .......|.|||.+....++.++|||+|||++|||+| |+.||.+.........
T Consensus 248 prtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~ 327 (1039)
T KOG0199|consen 248 PRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN 327 (1039)
T ss_pred cceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh
Confidence 999999999999988654321 2234578999999999999999999999999999998 8999998877665544
Q ss_pred hhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 394 VKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
++ ++.++. -+..+++++++++..||..+|++|||+..|.+.+-..+
T Consensus 328 iD-------~~erLp----------RPk~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 328 ID-------AGERLP----------RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred cc-------ccccCC----------CCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 43 111221 26788999999999999999999999999986655444
No 211
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.2e-38 Score=312.79 Aligned_cols=265 Identities=17% Similarity=0.229 Sum_probs=198.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||+|.... ....++++.............+.+|+.+++.++|+||+++++++..+ +..+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~--~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKL---TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE--KSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcC---CCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC--CeEE
Confidence 568888999999999999998543 23445555555443334445678999999999999999999998766 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+. ++|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAK 154 (301)
T ss_pred EEEeccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence 9999996 5898888543 346889999999999999999999999 999999999999999999999999998754
Q ss_pred CCC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc------
Q 011995 335 PET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC------ 405 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 405 (473)
... ......++..|+|||.+.+. .++.++|||||||++|||++|++||......+....+...........
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 155 SIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred CCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhc
Confidence 322 22334568899999998654 478899999999999999999999987665443322211100000000
Q ss_pred --ccccccccccCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 --RLSLIMDPQLKGR----FPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 --~~~~~~~~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.......+..... ....++..+.+||.+||+.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000111111 11235678899999999999999999999987
No 212
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=328.15 Aligned_cols=250 Identities=19% Similarity=0.294 Sum_probs=202.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
-|.+...||.|+||.||+|...+.. .++.+...-..+....+.|+-||+||..+.||+||+|++.|+.+ +.+||
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~----~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e--nkLwi 106 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETK----LLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE--NKLWI 106 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccch----hhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc--CceEE
Confidence 3666789999999999999854322 22222222223556678899999999999999999999988776 78999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
+.|||.||.++.++.. -+..|.+.++..+++|++.||.|||+++ |||||||..|||++-+|.++|+|||++....
T Consensus 107 liEFC~GGAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNK 181 (1187)
T ss_pred EEeecCCchHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccch
Confidence 9999999999988854 3567999999999999999999999999 9999999999999999999999999875443
Q ss_pred CC--CccCcccccccCChhhhhc-----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 336 ET--DISNSSVAAANLSVETLER-----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 336 ~~--~~~~~~~t~~y~aPE~~~~-----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
.. ....+.||++|||||++.. .+|++++||||||++|.||..+.+|-...++......+....|
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSeP--------- 252 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP--------- 252 (1187)
T ss_pred hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCC---------
Confidence 22 3457789999999998743 5699999999999999999999999887666554333322211
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
|.+. -|...+..+.+|+.+||.+||..||++.++++.
T Consensus 253 ----PTLl--qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 253 ----PTLL--QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred ----Cccc--CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 1111 156778899999999999999999999998864
No 213
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.9e-38 Score=305.58 Aligned_cols=250 Identities=18% Similarity=0.278 Sum_probs=195.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC----CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
.+|...+.||+|+||.||+|...+. .+.+++++..... .......+.+|+.+++.++|+||+++++++.+...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDT---GRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCC---CcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC
Confidence 4789999999999999999985433 3445555544332 12234568899999999999999999998876544
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...++++||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||+
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~ 152 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGA 152 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCC
Confidence 678999999999999999854 235889999999999999999999998 99999999999999999999999999
Q ss_pred CcccCCC-----CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 331 AGHIPET-----DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 331 a~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
+...... ......++..|+|||.+.+..++.++|||||||++|||++|+.||.............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~---------- 222 (266)
T cd06651 153 SKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIA---------- 222 (266)
T ss_pred ccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHh----------
Confidence 8754321 1123356789999999988889999999999999999999999997654322211110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.......++......+.+++ .||..+|++||+++||++
T Consensus 223 ------~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 223 ------TQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ------cCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 00011223445567788888 677789999999999975
No 214
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.8e-39 Score=318.76 Aligned_cols=237 Identities=18% Similarity=0.208 Sum_probs=185.5
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHH-HHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~-~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|+...+ ...+++|+..... .......+..|+. +++.++||||+++++++.+. +..|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~--~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSD---GSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA--EKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCC---CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC--CEEEEEE
Confidence 4699999999999986543 3445555554321 2223345555654 67889999999999988765 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC-
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE- 336 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~- 336 (473)
||+++|+|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||++.....
T Consensus 76 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 149 (321)
T cd05603 76 DYVNGGELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP 149 (321)
T ss_pred cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCC
Confidence 99999999988843 346888999999999999999999999 99999999999999999999999999875322
Q ss_pred -CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 337 -TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 337 -~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
.......+++.|+|||.+.+..++.++|||||||++|||++|..||...+.......+... .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~----------------~- 212 (321)
T cd05603 150 EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK----------------P- 212 (321)
T ss_pred CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC----------------C-
Confidence 2223446889999999999888999999999999999999999999876543322221100 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMR 446 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 446 (473)
..++...+..+.+++.+||+.||.+|+++.
T Consensus 213 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 213 -LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 012334567889999999999999999764
No 215
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-38 Score=319.81 Aligned_cols=261 Identities=15% Similarity=0.220 Sum_probs=188.5
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
...+|.+.+.||+|+||.||+|...... ..+++|+.. ......|+.++++++|+||+++++++... ..
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~valK~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~ 131 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQP---DPVVLKIGQ-------KGTTLIEAMLLQNVNHPSVIRMKDTLVSG--AI 131 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCC---ceEEEEeCC-------ccccHHHHHHHHhCCCCCCcChhheEEeC--Ce
Confidence 4467999999999999999999965442 333344321 12345799999999999999999999876 77
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+ .++|.+++.. ....+++..+..|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++
T Consensus 132 ~~lv~e~~-~~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~ 205 (357)
T PHA03209 132 TCMVLPHY-SSDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQ 205 (357)
T ss_pred eEEEEEcc-CCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCcccc
Confidence 89999999 4688888854 3456899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCC-CCCChHHH-------HhHhhhccccccc
Q 011995 333 HIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNL-DSRHPKEE-------RNLVKWSRPFLAD 403 (473)
Q Consensus 333 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~-~~~~~~~~-------~~~~~~~~~~~~~ 403 (473)
..... ......+|..|+|||++.+..++.++|||||||++|||+++..++ ........ ..+..........
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 285 (357)
T PHA03209 206 FPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVH 285 (357)
T ss_pred ccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccC
Confidence 54322 223456889999999999989999999999999999999865544 33211100 0000000000000
Q ss_pred cccc---------ccccc--cccCC---CC----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 DCRL---------SLIMD--PQLKG---RF----PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~---------~~~~~--~~l~~---~~----~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+ ....+ ...+. .+ ..+.+.++.+||.+||+.||.+|||+.|+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 286 PEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred hhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 0000 00000 00000 00 01334567789999999999999999999863
No 216
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.2e-39 Score=320.04 Aligned_cols=243 Identities=18% Similarity=0.263 Sum_probs=188.3
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+.++.++ +|+||+.+++++... +.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKN---DQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT--SRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC--CEEEEEE
Confidence 4699999999999986544 3445566555331 233456688999999888 699999999988765 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC--
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP-- 335 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~-- 335 (473)
||+++|+|..++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 76 e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 149 (327)
T cd05617 76 EYVNGGDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP 149 (327)
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCC
Confidence 99999999988843 346999999999999999999999999 9999999999999999999999999987532
Q ss_pred CCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 336 ETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 336 ~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
........+|+.|+|||++.+..++.++|||||||++|||++|..||.............+. ...+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~---------~~~~~~~-- 218 (327)
T cd05617 150 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL---------FQVILEK-- 218 (327)
T ss_pred CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH---------HHHHHhC--
Confidence 22233457899999999999999999999999999999999999999643221110000000 0000000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTM 445 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 445 (473)
...++...+..+.+++.+||..||.+|+++
T Consensus 219 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 219 PIRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 012344566788999999999999999985
No 217
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.7e-39 Score=311.51 Aligned_cols=251 Identities=20% Similarity=0.279 Sum_probs=196.7
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
|+..+.||+|+||.||++..... .+.++++...... .......+.+|+.+++.++|+||+.+++.+.+. +..+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRAT---GKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK--DALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCC---CceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC--CEEE
Confidence 66778999999999999986543 3455555443321 222345678899999999999999999988765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...
T Consensus 77 lv~e~~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~ 152 (285)
T cd05630 77 LVLTLMNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHV 152 (285)
T ss_pred EEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeec
Confidence 999999999999988543 2345899999999999999999999998 999999999999999999999999998765
Q ss_pred CCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 335 PETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 335 ~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
.... .....++..|+|||++.+..++.++|||||||++|||++|..||.............. ...
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~---~~~----------- 218 (285)
T cd05630 153 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER---LVK----------- 218 (285)
T ss_pred CCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHh---hhh-----------
Confidence 4322 2334678999999999988999999999999999999999999976432211111100 000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPT-----MRSIFE 450 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~ 450 (473)
.....++...+.++.+|+.+||+.||++||| +.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 219 EVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0001123345678899999999999999999 889887
No 218
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-38 Score=311.29 Aligned_cols=249 Identities=21% Similarity=0.322 Sum_probs=197.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|+..+.||+|+||.||+|....+ ...++++....... .....+.+|+.+++.++|+||+++++++... ...|
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~---~~~v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~--~~~~ 93 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVAT---GQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVG--DELW 93 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCC---CcEEEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEeeEEEEEEeC--CEEE
Confidence 4688889999999999999985432 33444554443322 2346788999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++.. ..+++..+..++.|++.||+|||+.+ |+|+||||+|||++.++.++|+|||++...
T Consensus 94 lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 94 VVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred EeecccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhc
Confidence 99999999999999843 34889999999999999999999999 999999999999999999999999998765
Q ss_pred CCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.... .....++..|+|||.+.+..++.++|||||||++|+|++|..||.......... .+.. .. .
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~--~~~~----~~-------~ 233 (296)
T cd06654 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIAT----NG-------T 233 (296)
T ss_pred cccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH--HHhc----CC-------C
Confidence 3322 223467789999999988889999999999999999999999997655432211 1100 00 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.+ ..+......+.+++.+||..||++||++.+|++.
T Consensus 234 ~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 234 PEL--QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCC--CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 000 1133456778999999999999999999999974
No 219
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.1e-38 Score=303.44 Aligned_cols=244 Identities=20% Similarity=0.379 Sum_probs=188.3
Q ss_pred cceeecCCceEEEEEECCCCe-----eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 181 RCISEGLSSVMYRASFGDDAS-----TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
+.||+|+||.||+|.+.+... ......++++...........+.+|+.+++.++|+||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR---DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec---CCcEE
Confidence 468999999999999765431 1112223333333222236788999999999999999999999876 45789
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-------cEEEecc
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF-------SAKLSGY 328 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-------~vkl~DF 328 (473)
||||+++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++ .+||+||
T Consensus 78 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 78 VEEYVKFGPLDVFLHRE--KNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEEcCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCC
Confidence 99999999999999643 226899999999999999999999998 99999999999999887 7999999
Q ss_pred CCCcccCCCCccCcccccccCChhhhhcC--CCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccc
Q 011995 329 GCAGHIPETDISNSSVAAANLSVETLERG--LLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 329 Gla~~~~~~~~~~~~~t~~y~aPE~~~~~--~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
|++..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||.............+..
T Consensus 153 g~a~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~------- 223 (259)
T cd05037 153 GIPITVLS--REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH------- 223 (259)
T ss_pred Cccccccc--ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC-------
Confidence 99876543 2233456789999999876 68999999999999999999 577886654322111111000
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
..+......+.+++.+||..+|.+|||+.+|++.|+
T Consensus 224 ------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 224 ------------RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ------------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 001111278899999999999999999999999874
No 220
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2e-38 Score=305.16 Aligned_cols=245 Identities=20% Similarity=0.360 Sum_probs=186.9
Q ss_pred cceeecCCceEEEEEECCCCe-------eeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 181 RCISEGLSSVMYRASFGDDAS-------TSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
+.||+|+||.||+|++..... ..+.+.++++.+.. .......+.+|+.++..++||||+++++++..+ ..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~--~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRD--VE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--CC
Confidence 368999999999998643221 12223344443332 223345788899999999999999999998765 67
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc-------EEE
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS-------AKL 325 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~-------vkl 325 (473)
.++||||+++|+|..++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +++
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred CEEEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEe
Confidence 89999999999999888542 346899999999999999999999999 999999999999987654 899
Q ss_pred eccCCCcccCCCCccCcccccccCChhhhh-cCCCCCcCCchHHHHHHHHHH-cCCCCCCCCChHHHHhHhhhccccccc
Q 011995 326 SGYGCAGHIPETDISNSSVAAANLSVETLE-RGLLTPKSNVWSFGIVLLELL-TGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 326 ~DFGla~~~~~~~~~~~~~t~~y~aPE~~~-~~~~s~~sDvwSlGvvl~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
+|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||......+...... .
T Consensus 154 ~d~g~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-------~ 224 (262)
T cd05077 154 SDPGIPITVLSR--QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYE-------G 224 (262)
T ss_pred CCCCCCccccCc--ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHh-------c
Confidence 999998655322 2345678899999986 456899999999999999997 6888887654332211110 0
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
... .......++.+|+.+||+.||.+||++.+|++.|+
T Consensus 225 ~~~------------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 225 QCM------------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred Ccc------------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 000 01122467899999999999999999999998763
No 221
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.1e-38 Score=302.23 Aligned_cols=251 Identities=24% Similarity=0.427 Sum_probs=199.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||++.+.++.. ++++...........+.+|+++++.++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~------~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~ 76 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTK------VAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIY 76 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCcc------EEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCeE
Confidence 568888999999999999998654332 3333333333445778999999999999999999998765 5689
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...
T Consensus 77 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 152 (260)
T cd05073 77 IITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI 152 (260)
T ss_pred EEEEeCCCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeec
Confidence 999999999999999653 3456899999999999999999999998 999999999999999999999999998765
Q ss_pred CCCCcc---CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDIS---NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~~---~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
...... ...++..|++||++....++.++|||||||++|+|++ |..||...........+... ...
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-------~~~--- 222 (260)
T cd05073 153 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-------YRM--- 222 (260)
T ss_pred cCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-------CCC---
Confidence 432221 2234567999999988889999999999999999998 99999875543322221110 000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
..+...+.++.+++.+||+.+|++||++.++++.|+.+
T Consensus 223 -------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 223 -------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred -------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 11233457899999999999999999999999999853
No 222
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.8e-38 Score=313.89 Aligned_cols=198 Identities=17% Similarity=0.223 Sum_probs=158.4
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEe
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~ 259 (473)
++.||+|+||+||+|...+.. ..+.++++..... .....+.+|+.+|++++||||+++++++........++||||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~-~~~~~aiK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGK-DDRDYALKQIEGT---GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCC-CCceEEEEEECCC---CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 368999999999999865432 2344445544322 223567899999999999999999998876555778999999
Q ss_pred ccCCChhhhhhcCC------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee----CCCCcEEEeccC
Q 011995 260 LFHGSLDRLIYGRS------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI----DKDFSAKLSGYG 329 (473)
Q Consensus 260 ~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl----~~~~~vkl~DFG 329 (473)
+. ++|.+++.... ....+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 85 58887774221 1235899999999999999999999999 9999999999999 456889999999
Q ss_pred CCcccCCC-----CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCC
Q 011995 330 CAGHIPET-----DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSR 385 (473)
Q Consensus 330 la~~~~~~-----~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~ 385 (473)
+++..... ......+|+.|+|||++.+. .++.++|||||||++|||++|++||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99766432 22345678999999999764 5899999999999999999999999654
No 223
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.3e-38 Score=309.42 Aligned_cols=265 Identities=18% Similarity=0.229 Sum_probs=196.7
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|...+.||+|++|.||+|+...+ ...+++++..... .......+.+|+.+++.++||||+++++++..+ +..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKT---GQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE--SRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCC---CcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC--CeEE
Confidence 477789999999999999986543 3345555544432 223346788999999999999999999999865 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+. ++|.+++........+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++...
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred EEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeec
Confidence 9999996 689888865444467999999999999999999999999 999999999999999999999999998755
Q ss_pred CCC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh-h-hcccc------ccc
Q 011995 335 PET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV-K-WSRPF------LAD 403 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~-~-~~~~~------~~~ 403 (473)
... ......+++.|+|||.+.+. .++.++|||||||++|||++|++||............ . +..+. ...
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 152 GIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred CCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchh
Confidence 322 12333567899999998654 4789999999999999999999999876543322111 0 00000 000
Q ss_pred ccccc----cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 DCRLS----LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 ~~~~~----~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..... ........ ......+.++.++|.+||+.||.+|||+.+|++
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 232 LPDYKNTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hHHHHhhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000 00000000 011235678899999999999999999999985
No 224
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.4e-38 Score=306.10 Aligned_cols=248 Identities=23% Similarity=0.362 Sum_probs=201.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||.|+||.||+|....+ ...+++++............+.+|+++++.++|+||+++++++.++ ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRT---NQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG--SKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCC---CeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC--CeEE
Confidence 3678889999999999999986543 3455566655544445567789999999999999999999998766 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|+||+++++|.+++... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 148 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQL 148 (274)
T ss_pred EEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceee
Confidence 999999999999998532 6899999999999999999999999 999999999999999999999999999776
Q ss_pred CCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
... ......++..|++||.+.+..++.++|||||||++|||++|..||...........+... ..
T Consensus 149 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-------------~~ 215 (274)
T cd06609 149 TSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-------------NP 215 (274)
T ss_pred cccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-------------CC
Confidence 543 223446678899999999888999999999999999999999999765533222111100 00
Q ss_pred cccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLK-AARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.+ +.. .+.++.+++.+||..||++|||++++++.
T Consensus 216 ~~~----~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 216 PSL----EGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred CCC----cccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 111 111 55778999999999999999999999863
No 225
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=323.09 Aligned_cols=254 Identities=18% Similarity=0.331 Sum_probs=212.7
Q ss_pred cCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 179 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
..++||+|-||.||+|++.+.. .++.++|+++.-+ ......+.|+.|..+|+.++|||||+|+|+|.+ ...|||
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~-kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e---~P~Wiv 468 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPE-KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE---QPMWIV 468 (974)
T ss_pred HHHhhcCCcccceeeeEecccc-cCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec---cceeEE
Confidence 3489999999999999987653 4455566666544 355667889999999999999999999999976 679999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
||+++.|.|..+|..+ ...|+..+...++.||+.+|+|||+.. +|||||...|||+.....|||+|||+++.+..
T Consensus 469 mEL~~~GELr~yLq~n--k~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 469 MELAPLGELREYLQQN--KDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EecccchhHHHHHHhc--cccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 9999999999999654 346899999999999999999999999 99999999999999999999999999998877
Q ss_pred CCccCcc---cccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 337 TDISNSS---VAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 337 ~~~~~~~---~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..+.... ..+.|||||.+.-..++.++|||-|||.+||+++ |..||.+-...+.. ..+..+.+
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-------~~iEnGeR------ 610 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-------GHIENGER------ 610 (974)
T ss_pred cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-------EEecCCCC------
Confidence 6554432 2478999999999999999999999999999986 99999875432211 11222222
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
-..|.+++..+..++.+||.+||.+||.+.+|...|.++...
T Consensus 611 ----lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 611 ----LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred ----CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 234788999999999999999999999999999999987653
No 226
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.8e-38 Score=307.13 Aligned_cols=261 Identities=21% Similarity=0.328 Sum_probs=203.4
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||.|++|.||++...+ ....++++.............+.+|++++++++|+||+++++++.......++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKN---TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECC---CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEE
Confidence 467888999999999999999654 33455566555444445567899999999999999999999998766556799
Q ss_pred EEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+||||+++++|.+++... .....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 154 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGE 154 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeecccccc
Confidence 999999999999887432 23456899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCCh--HHHHhHhhhccccccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHP--KEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..........++..|++||.+.+..++.++|||||||++|+|++|..||..... ........+.... .
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~----- 224 (287)
T cd06621 155 LVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-----P----- 224 (287)
T ss_pred ccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-----C-----
Confidence 544333344567899999999988899999999999999999999999976522 1111112211100 0
Q ss_pred ccccCCCC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRF--PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.+.... ....+..+.+|+.+||..+|.+|||+.|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 225 NPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred chhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00000000 12346789999999999999999999999983
No 227
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.6e-38 Score=342.34 Aligned_cols=261 Identities=15% Similarity=0.151 Sum_probs=201.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|+..+.||+|+||.||+|.... .++.+++|+.+... .....+++.+|+++++.++||||+++++++.+. +.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~---tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~--~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPV---CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG--DP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECC---CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC--CE
Confidence 578899999999999999998543 34455566554322 233456799999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCC--------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEE
Q 011995 253 RMLIYERLFHGSLDRLIYGRS--------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
.++||||+++|+|.+++.... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEE
Confidence 999999999999999885321 1234677888999999999999999999 99999999999999999999
Q ss_pred EeccCCCcccCCC--------------------CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCC
Q 011995 325 LSGYGCAGHIPET--------------------DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDS 384 (473)
Q Consensus 325 l~DFGla~~~~~~--------------------~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~ 384 (473)
|+|||++...... ......||+.|||||.+.+..++.++|||||||++|||+||..||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9999999765211 01123588999999999999999999999999999999999999976
Q ss_pred CChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhcc
Q 011995 385 RHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-TMRSIFEELDRQESR 458 (473)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~eil~~L~~l~~~ 458 (473)
........... +.++.... -...++..+.+++.+||..||++|+ +++++++.|+.+...
T Consensus 234 ~~~~ki~~~~~--------------i~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 234 KKGRKISYRDV--------------ILSPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred cchhhhhhhhh--------------ccChhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 43222111000 00000000 0124457789999999999999996 678888888876553
No 228
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.1e-38 Score=318.49 Aligned_cols=267 Identities=14% Similarity=0.180 Sum_probs=197.8
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC--
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-- 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~-- 249 (473)
..++|...+.||+|+||.||++.... ..+.+++|+.... ........+.+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~ 98 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAI---LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECC---CCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccc
Confidence 45789999999999999999998533 3344555554432 22344567889999999999999999999875432
Q ss_pred --CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 250 --SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 250 --~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
....|+||||+++ +|.+.+.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|
T Consensus 99 ~~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 99 EEFQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred cccCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEe
Confidence 1357999999965 77777632 3788999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc-------
Q 011995 328 YGCAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP------- 399 (473)
Q Consensus 328 FGla~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~------- 399 (473)
||+++...... .....++..|+|||++.+..++.++|||||||++|||++|+.||.+.+.......+.....
T Consensus 170 fG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 170 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred CCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99997664332 2344678999999999999999999999999999999999999987665443222210000
Q ss_pred ---------ccccccc-----ccccccccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 400 ---------FLADDCR-----LSLIMDPQL---KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 400 ---------~~~~~~~-----~~~~~~~~l---~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+...... ...+....+ ...........+.+|+.+||+.||.+|||+.++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 000000000 001112234678999999999999999999999985
No 229
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.8e-38 Score=303.26 Aligned_cols=250 Identities=16% Similarity=0.242 Sum_probs=197.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC----ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
++|...+.||+|+||.||+|...++ ++.++++....... ......+.+|+.++++++|+||+++++++.+...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~---~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADT---GRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCC---CcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCC
Confidence 5788899999999999999986543 34555555443321 2234678899999999999999999998876544
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
..+++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+|+||||+|||++.++.++|+|||+
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~ 152 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGA 152 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcc
Confidence 6788999999999999998532 35788999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCC-----CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 331 AGHIPET-----DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 331 a~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
+...... ......++..|+|||.+.+..++.++|||||||++|||++|+.||..............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~--------- 223 (265)
T cd06652 153 SKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT--------- 223 (265)
T ss_pred ccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---------
Confidence 8755321 22334577899999999888899999999999999999999999976533322111110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.......+...+..+.+++.+||. +|++||++++|++
T Consensus 224 -------~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 224 -------QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -------CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 001112355667788999999995 9999999999985
No 230
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.7e-38 Score=308.93 Aligned_cols=265 Identities=22% Similarity=0.309 Sum_probs=202.9
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCccccee
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLG 243 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g 243 (473)
+.++.+....++|+..+.||+|+||.||++..... .+.+++++... .......+.+|+.+++.+ +|+||+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~---~~~~~ik~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 82 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKN---GSKAAVKILDP--IHDIDEEIEAEYNILKALSDHPNVVKFYG 82 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCC---CceeEEEeecc--ccchHHHHHHHHHHHHHHhcCCCeeeeee
Confidence 44566777889999999999999999999986443 34444554332 222346688999999999 6999999999
Q ss_pred eeecC---CCCceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 244 FHARD---GSDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 244 ~~~~~---~~~~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
++... ..+..++||||+++++|.+++... .....+++..+..++.|++.||.|||+.+ |+||||||+||+++.
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~ 159 (286)
T cd06638 83 MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTT 159 (286)
T ss_pred eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECC
Confidence 87532 236789999999999999987532 23456899999999999999999999998 999999999999999
Q ss_pred CCcEEEeccCCCcccCCCC--ccCcccccccCChhhhhc-----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh
Q 011995 320 DFSAKLSGYGCAGHIPETD--ISNSSVAAANLSVETLER-----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN 392 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~--~~~~~~t~~y~aPE~~~~-----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~ 392 (473)
++.+||+|||++....... .....++..|+|||++.. ..++.++|||||||++|||++|+.||..........
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~ 239 (286)
T cd06638 160 EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF 239 (286)
T ss_pred CCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh
Confidence 9999999999987654322 233467889999999853 347889999999999999999999997654332211
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
..... ..+.+ ..+...+..+.+++.+||+.||++|||+.||++.+
T Consensus 240 ~~~~~-------------~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 KIPRN-------------PPPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hcccc-------------CCCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 11000 00000 01223356789999999999999999999999753
No 231
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.9e-38 Score=301.32 Aligned_cols=249 Identities=18% Similarity=0.381 Sum_probs=196.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|+..+.||+|+||.||+|.+.++. .++++. ..........+.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~----~~~~k~--~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 75 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKR----KVAIKT--IREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTER--SPIC 75 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCC----eEEEEE--CCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccC--CceE
Confidence 35777799999999999999865332 233333 333333456789999999999999999999988765 6889
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ...+++..+..++.+++.+|+|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 150 (256)
T cd05112 76 LVFEFMEHGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFV 150 (256)
T ss_pred EEEEcCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeec
Confidence 999999999999998543 345889999999999999999999999 999999999999999999999999998765
Q ss_pred CCCCcc---CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETDIS---NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~~~---~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
...... ...++..|+|||.+.+..++.++|||||||++|||++ |..||...........+.. +. ..
T Consensus 151 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-------~~---~~ 220 (256)
T cd05112 151 LDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA-------GF---RL 220 (256)
T ss_pred ccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC-------CC---CC
Confidence 433222 2234568999999998889999999999999999998 9999976554332221110 00 00
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
. .+...+..+.+|+.+||+.+|++|||+.++++.|.
T Consensus 221 ~-------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 221 Y-------KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred C-------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 0 12223578999999999999999999999999873
No 232
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.3e-38 Score=306.90 Aligned_cols=246 Identities=20% Similarity=0.339 Sum_probs=197.4
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
|+..+.||.|+||.||+|....+ ...+++++............+.+|++++++++|+||+++++++..+ +..++|
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 80 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRT---KEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG--TKLWII 80 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCC---CeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccC--CceEEE
Confidence 55558899999999999986443 3345555554444445567889999999999999999999998765 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|||+++++|.+++.. ..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 81 MEYLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred EEccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccC
Confidence 999999999998842 35899999999999999999999998 99999999999999999999999999876643
Q ss_pred CCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 337 TDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 337 ~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
... ....++..|+|||.+.+..++.++|||||||++|||++|..||...........+ .. .
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-------~~----------~ 216 (277)
T cd06642 154 TQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI-------PK----------N 216 (277)
T ss_pred cchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh-------hc----------C
Confidence 321 2235678899999999888999999999999999999999999754432211110 00 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.........+..+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 217 SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0111233456789999999999999999999999983
No 233
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.6e-38 Score=308.90 Aligned_cols=248 Identities=21% Similarity=0.347 Sum_probs=198.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|+..+.||.|+||.||+|.... ....++++..... .......+.+|+.+++.++|+||+++++++... +.++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~---~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 92 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVA---TGQEVAIKQINLQ-KQPKKELIINEILVMKELKNPNIVNFLDSFLVG--DELF 92 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcC---CCcEEEEEEEecc-cCchHHHHHHHHHHHHhcCCCceeeeeeeEecC--ceEE
Confidence 468888999999999999998433 3344445544433 223456788999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|+||+++++|.+++.. ..+++..+..++.+++.||+|||+.+ ++|+||||+||+++.++.+||+|||++...
T Consensus 93 lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~ 165 (296)
T cd06655 93 VVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQI 165 (296)
T ss_pred EEEEecCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhc
Confidence 99999999999998843 35899999999999999999999999 999999999999999999999999998765
Q ss_pred CCCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... ....++..|+|||.+.+..++.++|||||||++|+|++|..||...........+.-.. .
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~-------------~ 232 (296)
T cd06655 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-------------T 232 (296)
T ss_pred ccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-------------C
Confidence 43322 23467789999999988889999999999999999999999998765543322111000 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+.+ ..+..++..+.++|.+||..||.+||++.+|++
T Consensus 233 ~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 233 PEL--QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ccc--CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000 113345678899999999999999999999985
No 234
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.3e-37 Score=300.38 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=188.6
Q ss_pred ceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEecc
Q 011995 182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLF 261 (473)
Q Consensus 182 ~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~ 261 (473)
.||+|+||.||+|...++.. ...+.++.............+.+|+.+++.++||||+++++++... ...++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTG-VARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--IPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCC-cceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCC--CccEEEEecCC
Confidence 59999999999997543322 2222334333333344567899999999999999999999998765 78999999999
Q ss_pred CCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC--
Q 011995 262 HGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD-- 338 (473)
Q Consensus 262 ~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~-- 338 (473)
+|+|.+++..... ...+++..+..++.||+.||+|||+.+ ++||||||+|||++.++.++|+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 9999999965322 235677888999999999999999998 9999999999999999999999999986432221
Q ss_pred --ccCcccccccCChhhhhc-------CCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 339 --ISNSSVAAANLSVETLER-------GLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 339 --~~~~~~t~~y~aPE~~~~-------~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
.....++..|+|||++.. ..++.++|||||||++|||++ |..||......+....+... ...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~--------~~~ 227 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKD--------QQV 227 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhh--------ccc
Confidence 123456789999999753 235789999999999999996 57788765443322211100 011
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
...++.+ ....+..+.+++..|| .+|.+||++.+|++.|.
T Consensus 228 ~~~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 228 KLFKPQL----ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccCCCcc----CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1122222 2234577888999999 67999999999999874
No 235
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=6.8e-38 Score=303.70 Aligned_cols=247 Identities=20% Similarity=0.329 Sum_probs=201.7
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
.|+..+.||.|+||.||+|..... ...+++++............+.+|+.+++.+.|+||+++++++.++ ...++
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l 79 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRT---QQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG--TKLWI 79 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccC---CEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--CEEEE
Confidence 466668999999999999986543 3445566555444445567899999999999999999999998876 78999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 80 v~e~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06640 80 IMEYLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred EEecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceecc
Confidence 9999999999999843 35889999999999999999999998 9999999999999999999999999997664
Q ss_pred CCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 336 ETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 336 ~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
.... ....++..|+|||.+.+..++.++|+|||||++|||++|..||...........+..
T Consensus 153 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~----------------- 215 (277)
T cd06640 153 DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK----------------- 215 (277)
T ss_pred CCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc-----------------
Confidence 4321 233567889999999888899999999999999999999999976554332211110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
......+..++..+.+++.+||+.+|++||++.++++.
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 216 NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 01122345677889999999999999999999999876
No 236
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5e-38 Score=300.24 Aligned_cols=248 Identities=20% Similarity=0.331 Sum_probs=199.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||.|+||.||+|...++. ..++++..... .....+.+|+++++.++|+||+++++++... ...|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~---~~~~~k~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~ 74 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETG---QVVAIKVVPVE---EDLQEIIKEISILKQCDSPYIVKYYGSYFKN--TDLW 74 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCC---cEEEEEEeecH---HHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--CcEE
Confidence 57888899999999999999976532 33344443322 1267899999999999999999999999876 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+++||+.+++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 75 l~~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~ 149 (256)
T cd06612 75 IVMEYCGAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQL 149 (256)
T ss_pred EEEecCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhc
Confidence 999999999999998542 356899999999999999999999999 999999999999999999999999998876
Q ss_pred CCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.... .....++..|++||.+.+..++.++|||||||++|+|++|..||...........+.- ...
T Consensus 150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~-------------~~~ 216 (256)
T cd06612 150 TDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN-------------KPP 216 (256)
T ss_pred ccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc-------------CCC
Confidence 4432 2233567899999999888899999999999999999999999976543322111100 000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+. ...+...+..+.+++.+||+.||.+|||+.+|++
T Consensus 217 ~~--~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 217 PT--LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CC--CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 1113345678999999999999999999999986
No 237
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3e-38 Score=314.45 Aligned_cols=254 Identities=13% Similarity=0.162 Sum_probs=194.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|++.+.||+|+||.||++..... .+.+++|+.... ........+.+|+.++..++|+||+.+++++.++ +.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNT---GQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE--NN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCC---CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC--Ce
Confidence 4788899999999999999986543 345556655421 1223345688999999999999999999988766 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|+||||+++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 150 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCL 150 (331)
T ss_pred EEEEEecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCcee
Confidence 99999999999999999542 346899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCc---cCcccccccCChhhhhc-----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 333 HIPETDI---SNSSVAAANLSVETLER-----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 333 ~~~~~~~---~~~~~t~~y~aPE~~~~-----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
....... ....+|+.|||||++.. ..++.++|||||||++|||++|+.||......+....+... .
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~------~ 224 (331)
T cd05597 151 RLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH------K 224 (331)
T ss_pred ecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcC------C
Confidence 6543221 22358899999999863 45788999999999999999999999876543332222100 0
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCC--CCCCHHHHHHH
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPS--ERPTMRSIFEE 451 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~--~RPt~~eil~~ 451 (473)
... .+. ......+..+.+++.+||..++. .|+++.++++.
T Consensus 225 ~~~------~~~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 225 EHF------QFP-PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred Ccc------cCC-CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 000 000 01123567889999998865443 37899999877
No 238
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4e-38 Score=307.43 Aligned_cols=264 Identities=23% Similarity=0.330 Sum_probs=203.6
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCccccee
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLG 243 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g 243 (473)
++.+++...+++|...+.||+|+||.||++...++ .+.+++++... .......+.+|+.++.++ +|+||+++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~---~~~~aik~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~~~ 86 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKD---GSLAAVKILDP--ISDVDEEIEAEYNILQSLPNHPNVVKFYG 86 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCC---CCEEEEEEecc--cccHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 45566677789999999999999999999986443 34444554432 223346778899999999 8999999999
Q ss_pred eeecCC---CCceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 244 FHARDG---SDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 244 ~~~~~~---~~~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
++.... .+..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.
T Consensus 87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~ 163 (291)
T cd06639 87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTT 163 (291)
T ss_pred EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcC
Confidence 987532 24689999999999999988532 23456899999999999999999999998 999999999999999
Q ss_pred CCcEEEeccCCCcccCCCC--ccCcccccccCChhhhhcCC-----CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh
Q 011995 320 DFSAKLSGYGCAGHIPETD--ISNSSVAAANLSVETLERGL-----LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN 392 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~~--~~~~~~t~~y~aPE~~~~~~-----~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~ 392 (473)
++.+||+|||++....... .....++..|+|||.+.... ++.++|||||||++|||++|+.||..........
T Consensus 164 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~ 243 (291)
T cd06639 164 EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF 243 (291)
T ss_pred CCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH
Confidence 9999999999987654332 22345678899999986432 6889999999999999999999998665433222
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+....+ +.+ ..+......+.++|.+||+.+|++||++.++++.
T Consensus 244 ~~~~~~~-------------~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 244 KIPRNPP-------------PTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHhcCCC-------------CCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1111000 000 0122345679999999999999999999999863
No 239
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=7.3e-38 Score=298.56 Aligned_cols=245 Identities=20% Similarity=0.370 Sum_probs=195.2
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+.||.|+||.||++...+ .+.+++|.............+.+|+++++++.|+||+++++++... ...++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~----~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG----NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--QPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC----CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--CCeEEEEEcC
Confidence 469999999999998654 2344455444333334567899999999999999999999998766 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCcc
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIS 340 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 340 (473)
++++|.+++... ...+++..+..++.+++.+|+|||+++ ++||||+|+|||++.++.+||+|||++.........
T Consensus 75 ~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 149 (251)
T cd05041 75 PGGSLLTFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT 149 (251)
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcce
Confidence 999999998543 336889999999999999999999999 999999999999999999999999998765422211
Q ss_pred ----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 341 ----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 341 ----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
....+..|+|||.+.++.++.++|||||||++|||++ |..||...........+... .
T Consensus 150 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-----------------~ 212 (251)
T cd05041 150 VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-----------------Y 212 (251)
T ss_pred eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-----------------C
Confidence 1223567999999988889999999999999999999 88999766543332222110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
....+...+.++.+++.+||..+|.+|||+.||++.|+
T Consensus 213 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 213 RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 01123345678999999999999999999999999986
No 240
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.5e-38 Score=300.91 Aligned_cols=253 Identities=18% Similarity=0.253 Sum_probs=202.7
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|+..+.||.|+||.||++....+ ...+++++..... .....+.+..|+++++.++|+||+++++++........+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSD---GKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCC---CCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEE
Confidence 477889999999999999985443 3444555544332 334456788999999999999999999988765556789
Q ss_pred EEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhh-----hcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 255 LIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLH-----EEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH-----~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
++|||+++++|.+++... .....+++..+..++.|++.||.||| +.+ ++|+||+|+||+++.++.+||+||
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~ 154 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDF 154 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEecc
Confidence 999999999999998542 22457899999999999999999999 777 999999999999999999999999
Q ss_pred CCCcccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 329 GCAGHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 329 Gla~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
|++....... .....++..|++||.+.+..++.++||||||+++++|++|..||...........+. .
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------~--- 224 (265)
T cd08217 155 GLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK-------E--- 224 (265)
T ss_pred cccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh-------c---
Confidence 9998775443 234467889999999988889999999999999999999999998765332221111 0
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....++...+..+.+++.+||+.+|.+||++.+|++.
T Consensus 225 -------~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 225 -------GKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -------CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00112344566889999999999999999999999863
No 241
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.7e-38 Score=303.14 Aligned_cols=257 Identities=16% Similarity=0.303 Sum_probs=197.6
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
|++.+++++.....||+|+||.||+|...++. ..++++.... ......+.+.+|+.+++.++|+||+++++++..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~---~~v~~k~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 77 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQ---VRIAIKEIPE-RDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN 77 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCC---cEEEEEEecC-CCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC
Confidence 34556777777789999999999999865443 2333333222 2334556889999999999999999999998765
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCC--CHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC-CCcEEE
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPI--DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK-DFSAKL 325 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l--~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~-~~~vkl 325 (473)
+..++|+||+++++|.+++.... ..+ ++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.++|
T Consensus 78 --~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l 150 (268)
T cd06624 78 --GFFKIFMEQVPGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKI 150 (268)
T ss_pred --CEEEEEEecCCCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEE
Confidence 78999999999999999996432 234 78889999999999999999998 999999999999986 679999
Q ss_pred eccCCCcccCCCC--ccCcccccccCChhhhhcCC--CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc
Q 011995 326 SGYGCAGHIPETD--ISNSSVAAANLSVETLERGL--LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL 401 (473)
Q Consensus 326 ~DFGla~~~~~~~--~~~~~~t~~y~aPE~~~~~~--~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 401 (473)
+|||++....... .....++..|+|||++.+.. ++.++||||||+++|+|++|..||......... .+.....
T Consensus 151 ~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~---~~~~~~~ 227 (268)
T cd06624 151 SDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA---MFKVGMF 227 (268)
T ss_pred ecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh---Hhhhhhh
Confidence 9999987653322 22335678999999986644 788999999999999999999999654322111 1110000
Q ss_pred ccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....++.....++.+|+.+||+.+|.+|||+.+++..
T Consensus 228 ------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 228 ------------KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ------------ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 01112344566889999999999999999999999863
No 242
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.6e-38 Score=315.31 Aligned_cols=268 Identities=12% Similarity=0.176 Sum_probs=196.2
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC-
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG- 249 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~- 249 (473)
...++|...+.||+|+||.||+|....+ .+.+++|+..... .......+.+|+.+|+.++|+||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRL---RQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS 88 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCC---CCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc
Confidence 4568899999999999999999985433 3444555443221 2233456789999999999999999999875432
Q ss_pred ---CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 250 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
....|+++|++ +++|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+
T Consensus 89 ~~~~~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 89 IENFNEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred ccccCcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEc
Confidence 14578999988 779988873 235999999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh-hccccccc-
Q 011995 327 GYGCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK-WSRPFLAD- 403 (473)
Q Consensus 327 DFGla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~-~~~~~~~~- 403 (473)
|||++..... ......++..|+|||++.+ ..++.++|||||||++|||++|..||...........+. ........
T Consensus 161 Dfg~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 161 DFGLARQADD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred CCccceecCC-CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9999986543 2344578899999999876 468999999999999999999999998755433222111 00000000
Q ss_pred cccc-----ccccc--cccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 DCRL-----SLIMD--PQLKG----RFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~-----~~~~~--~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+ ..... +.... .........+.+|+.+||+.||.+|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 00000 00000 0001234567899999999999999999999965
No 243
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.8e-38 Score=304.87 Aligned_cols=249 Identities=20% Similarity=0.279 Sum_probs=193.6
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
|+..+.||.|+||.||+|...... ..++++.... ........+.+|+++++.++|+||+++++++... +..++|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~---~~~~~k~~~~-~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~~~~v 80 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETG---VLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNLWIL 80 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCC---eEEEEEEeCC-CCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--CEEEEE
Confidence 566688999999999999865443 2333333322 1234456788999999999999999999998776 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|||+++++|..++... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~ 155 (282)
T cd06643 81 IEFCAGGAVDAVMLEL--ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 155 (282)
T ss_pred EEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccc
Confidence 9999999999887542 346899999999999999999999999 99999999999999999999999999875532
Q ss_pred C--CccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 337 T--DISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 337 ~--~~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
. ......++..|+|||++. +..++.++|||||||++|||++|.+||...........+....
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~----------- 224 (282)
T cd06643 156 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE----------- 224 (282)
T ss_pred cccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC-----------
Confidence 2 123346788999999984 3457889999999999999999999997655433221111000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.+ ..+..++.++.+|+.+||+.||.+||++.++++.
T Consensus 225 --~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 225 --PPTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred --CCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 1123455789999999999999999999998754
No 244
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7e-38 Score=300.27 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=200.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||.|+||.||+|....+ .+.+++++...... .....+.+|++++++++||||+++++++... +.++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~ 76 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIAT---GELVAIKVIKLEPG-DDFEIIQQEISMLKECRHPNIVAYFGSYLRR--DKLW 76 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCC---CCEEEEEEEEcCch-hhHHHHHHHHHHHHhCCCCChhceEEEEEeC--CEEE
Confidence 5788889999999999999986443 23455555554322 2567889999999999999999999988765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
++|||+.+++|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++...
T Consensus 77 l~~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 151 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQL 151 (262)
T ss_pred EEEeCCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhh
Confidence 999999999999988542 246899999999999999999999999 999999999999999999999999998765
Q ss_pred CCCC--ccCcccccccCChhhhhcC---CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 335 PETD--ISNSSVAAANLSVETLERG---LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 335 ~~~~--~~~~~~t~~y~aPE~~~~~---~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
.... .....++..|++||.+.+. .++.++|||||||++|||++|..||...........+....
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~----------- 220 (262)
T cd06613 152 TATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSN----------- 220 (262)
T ss_pred hhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-----------
Confidence 4321 2334567889999999776 78999999999999999999999998765443322111000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...+.+ ......+.++.+|+.+||..+|.+|||+.+|+.
T Consensus 221 ~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 221 FPPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred CCCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 123456678999999999999999999999985
No 245
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.1e-37 Score=301.01 Aligned_cols=259 Identities=21% Similarity=0.399 Sum_probs=201.5
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC----C
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS----D 251 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~----~ 251 (473)
|.+.+.||+|+||.||+|.+..+......+++|+..... .....+++.+|+.+++.++||||+++++++..... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556689999999999999876555555666676655432 33446678999999999999999999998765321 1
Q ss_pred ceEEEEEeccCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 252 QRMLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
..++++||+.+|+|.+++.... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 3478899999999988874321 2235789999999999999999999998 999999999999999999999999
Q ss_pred CCCcccCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccc
Q 011995 329 GCAGHIPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 329 Gla~~~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
|+++...... .....++..|++||.+....++.++|||||||++|||++ |.+||...........+..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~------- 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK------- 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc-------
Confidence 9988664322 122234578999999988889999999999999999999 8999976554332221110
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
.... ..+...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 231 ~~~~----------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNRL----------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 01223457899999999999999999999999999876
No 246
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-39 Score=322.79 Aligned_cols=243 Identities=19% Similarity=0.359 Sum_probs=196.0
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEe
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~ 259 (473)
-+||+|+||+||-|+..+ +...+ +++.+.. ..+..+-+..||.+.++++|.|||+++|.+..+ +++-|.||-
T Consensus 581 vVLGKGTYG~VYA~RD~~---tqvrI--aIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen--Gf~kIFMEq 653 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMD---TQVRI--AIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN--GFFKIFMEQ 653 (1226)
T ss_pred EEeecCceeEEEeecccc---ceeEE--EeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC--CeEEEEeec
Confidence 479999999999998444 43443 4444432 344556788999999999999999999998766 678889999
Q ss_pred ccCCChhhhhhcCCCCCCC--CHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-CCCcEEEeccCCCcccCC
Q 011995 260 LFHGSLDRLIYGRSDGPPI--DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-KDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l--~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~~vkl~DFGla~~~~~ 336 (473)
++||||.++|+... +++ .+.+...+..||++||.|||+.. |||||||-+||||+ -.|.+||+|||-++.+..
T Consensus 654 VPGGSLSsLLrskW--GPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 654 VPGGSLSSLLRSKW--GPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred CCCCcHHHHHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 99999999997643 456 78889999999999999999998 99999999999997 459999999998876632
Q ss_pred --CCccCcccccccCChhhhhcCC--CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHH-hHhhhccccccccccccccc
Q 011995 337 --TDISNSSVAAANLSVETLERGL--LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER-NLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 337 --~~~~~~~~t~~y~aPE~~~~~~--~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 411 (473)
....++.||..|||||++..+. |+.++|||||||++.||.||++||......+.. ..+ .+. ..
T Consensus 729 inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV----Gmy--------Kv 796 (1226)
T KOG4279|consen 729 INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV----GMY--------KV 796 (1226)
T ss_pred CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh----cce--------ec
Confidence 2345678999999999996654 899999999999999999999999755433221 111 000 11
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. ..+|...+.++..||.+|+..||.+||++.++|+.
T Consensus 797 H----P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 797 H----PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred C----CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 2 23488999999999999999999999999999874
No 247
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.6e-38 Score=304.81 Aligned_cols=245 Identities=20% Similarity=0.333 Sum_probs=186.9
Q ss_pred cceeecCCceEEEEEECCCCee--eeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDAST--SKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||+|+||.||+|........ .....++++.... .....+.+.+|+.+++.++||||+++++++..+ ...++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG--DESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC--CCcEEEE
Confidence 3689999999999986443211 1111122222222 223346788999999999999999999999875 6789999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc--------EEEeccC
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS--------AKLSGYG 329 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~--------vkl~DFG 329 (473)
||+++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++. ++++|||
T Consensus 79 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 79 EYVKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred ecCCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccc
Confidence 999999999999643 336899999999999999999999999 999999999999987764 6999999
Q ss_pred CCcccCCCCccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcC-CCCCCCCChHHHHhHhhhccccccccccc
Q 011995 330 CAGHIPETDISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTG-RKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 330 la~~~~~~~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
++...... ....++..|+|||++.+. .++.++|||||||++|||++| ..||............. .
T Consensus 154 ~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~-------~---- 220 (258)
T cd05078 154 ISITVLPK--EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE-------D---- 220 (258)
T ss_pred cccccCCc--hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH-------c----
Confidence 88655332 234567889999999764 479999999999999999998 46665544332221111 0
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
...++.....++.+++.+||+.||++|||+++|++.|+
T Consensus 221 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 --------RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred --------cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00122234467899999999999999999999999874
No 248
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=8.5e-38 Score=299.00 Aligned_cols=251 Identities=18% Similarity=0.240 Sum_probs=199.2
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|+..+.||+|++|.||++....+ .+.++++...... .....+.+.+|++++++++|+|++++++.+... ...++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTD---GKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE-DGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCC---CcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-CCEEE
Confidence 478889999999999999986443 3445555554332 234456788999999999999999999877543 25689
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ....+++.++..++.+++.||+|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 77 lv~e~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~ 152 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVL 152 (257)
T ss_pred EEecccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEe
Confidence 999999999999998653 2446899999999999999999999999 999999999999999999999999998766
Q ss_pred CCC--CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PET--DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
... ......+++.|+|||++.+..++.++|||||||+++||++|+.||...+.......+.. + .
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-------~-~------ 218 (257)
T cd08223 153 ENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE-------G-K------ 218 (257)
T ss_pred cccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-------c-C------
Confidence 432 22334567899999999988899999999999999999999999976553322111110 0 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....+...+..+.+|+.+||+.||.+||++.++++.
T Consensus 219 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 219 ---LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 011234566789999999999999999999999863
No 249
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.1e-38 Score=298.75 Aligned_cols=251 Identities=19% Similarity=0.255 Sum_probs=201.6
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|+..+.||.|+||.||.+....+ +..++++...... .......+.+|++++++++|+||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTED---DSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD--NTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCC---CcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC--CeEE
Confidence 477889999999999999885433 3344455444332 344567789999999999999999999999875 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...
T Consensus 76 ~~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~ 151 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKIL 151 (256)
T ss_pred EEEEecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEc
Confidence 9999999999999996542 456899999999999999999999998 999999999999999999999999998766
Q ss_pred CCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.... .....++..|+|||.+.+..++.++||||||+++|||++|..||......+....+...
T Consensus 152 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--------------- 216 (256)
T cd08221 152 GSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--------------- 216 (256)
T ss_pred ccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC---------------
Confidence 4332 23446789999999998888899999999999999999999999775543322211100
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
... ..+...+.++.+++.+||..+|.+||++.++++.+
T Consensus 217 -~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 217 -NYT-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -CCC-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 000 11234567899999999999999999999998753
No 250
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.8e-38 Score=305.36 Aligned_cols=261 Identities=19% Similarity=0.280 Sum_probs=201.9
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCccccee
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLG 243 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g 243 (473)
.++.++....+.|+..+.||.|+||.||+|..... ...+++++... .......+..|+.++.++ +|+||+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~a~K~~~~--~~~~~~~~~~e~~~l~~~~~h~~i~~~~~ 80 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKT---GQLAAIKVMDV--TEDEEEEIKLEINMLKKYSHHRNIATYYG 80 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCC---CcEEEEEEEec--ChHHHHHHHHHHHHHHHhcCCCcEEEEee
Confidence 35556666678899999999999999999986543 23444554433 233456788999999998 7999999999
Q ss_pred eeecC----CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC
Q 011995 244 FHARD----GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK 319 (473)
Q Consensus 244 ~~~~~----~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 319 (473)
++... ..+..|+||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.
T Consensus 81 ~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~ 156 (282)
T cd06636 81 AFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTE 156 (282)
T ss_pred ehhcccccCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECC
Confidence 88542 236789999999999999998653 2445888999999999999999999999 999999999999999
Q ss_pred CCcEEEeccCCCcccCCC--CccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh
Q 011995 320 DFSAKLSGYGCAGHIPET--DISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN 392 (473)
Q Consensus 320 ~~~vkl~DFGla~~~~~~--~~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~ 392 (473)
++.++|+|||++...... ......++..|+|||.+. ...++.++|||||||++|||++|..||..........
T Consensus 157 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~ 236 (282)
T cd06636 157 NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF 236 (282)
T ss_pred CCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh
Confidence 999999999998765322 223346788999999985 3457889999999999999999999997654333222
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.+.+.. .+. .....++.++.+||.+||+.||.+||++.||++
T Consensus 237 ~~~~~~-------------~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 LIPRNP-------------PPK---LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hHhhCC-------------CCC---CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 111100 000 012235578999999999999999999999975
No 251
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.7e-38 Score=302.45 Aligned_cols=248 Identities=19% Similarity=0.312 Sum_probs=195.3
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-----CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
+|...+.||.|+||.||+|...++ ..++++...... .......+.+|+++++.++|+||+++++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~----~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQG----QLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD-- 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCC----CeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC--
Confidence 477789999999999999975432 334444443322 122345688999999999999999999999766
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+|+||+|+||+++.++.++|+|||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~ 148 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGC 148 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchh
Confidence 7899999999999999999542 35889999999999999999999999 99999999999999999999999998
Q ss_pred CcccCCC--------CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccc
Q 011995 331 AGHIPET--------DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 331 a~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
+...... ......++..|+|||++.+..++.++|||||||++|||++|..||...........+.-..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~---- 224 (265)
T cd06631 149 ARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHR---- 224 (265)
T ss_pred hHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhcc----
Confidence 8754211 1123456789999999998889999999999999999999999997654333221111000
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
......+...+.++.+++.+||+.+|.+||++.++++
T Consensus 225 -----------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 -----------GLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -----------CCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0001123345678899999999999999999999985
No 252
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.9e-38 Score=303.71 Aligned_cols=252 Identities=21% Similarity=0.367 Sum_probs=197.4
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChh-hHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG-VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
|+..+.||+|+||+||++....+. ..+++|+......... .....+|+.++++++|+||+++++++... ...++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~---~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNG---QKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD--NYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTT---EEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES--SEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCC---eEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc--ccccc
Confidence 567799999999999999965543 4556666655432222 23346699999999999999999999875 88999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc-
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI- 334 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~- 334 (473)
||||+.+++|.+++. ....+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||.+...
T Consensus 76 v~~~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~ 149 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLS 149 (260)
T ss_dssp EEEEETTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEEST
T ss_pred ccccccccccccccc---cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence 999999999999995 2346899999999999999999999999 999999999999999999999999998753
Q ss_pred -CCCCccCcccccccCChhhhh-cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 -PETDISNSSVAAANLSVETLE-RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 -~~~~~~~~~~t~~y~aPE~~~-~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.........++..|+|||++. +..++.++||||||+++|+|++|..||......................
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 221 (260)
T PF00069_consen 150 ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS-------- 221 (260)
T ss_dssp STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH--------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc--------
Confidence 223334557789999999998 7789999999999999999999999998763333322222111000000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.. .........+.+++.+||+.||++||++.++++
T Consensus 222 -~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 222 -SS--QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp -HT--TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred -cc--cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 000112378999999999999999999999985
No 253
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.8e-38 Score=305.04 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=197.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|++.+.||.|+||.||+|....+ ...+++++.... .......+.+|++++++++|+||+++++++..+ ...+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 78 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKET---GLFAAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE--NKLW 78 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCC---CcEEEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC--CeEE
Confidence 5688889999999999999986543 234445554432 333456788999999999999999999998865 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...
T Consensus 79 lv~e~~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~ 153 (280)
T cd06611 79 ILIEFCDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKN 153 (280)
T ss_pred EEeeccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhh
Confidence 999999999999998542 346899999999999999999999999 999999999999999999999999988655
Q ss_pred CCCC--ccCcccccccCChhhhhc-----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 335 PETD--ISNSSVAAANLSVETLER-----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 335 ~~~~--~~~~~~t~~y~aPE~~~~-----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
.... .....++..|++||.+.. ..++.++|||||||++|||++|..||...........+....
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------- 224 (280)
T cd06611 154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSE--------- 224 (280)
T ss_pred cccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCC---------
Confidence 3221 233457889999999853 346789999999999999999999997754433221111000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.+ ..+...+.++.+++.+||+.||.+||++.++++.
T Consensus 225 ----~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 225 ----PPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ----CCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0000 1133456788999999999999999999999875
No 254
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=6.5e-38 Score=299.71 Aligned_cols=247 Identities=22% Similarity=0.378 Sum_probs=196.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||++...+. .++++..... .....+.+|+.++.+++|+||+++++++.. +..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~iK~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~~~ 74 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQ-----KVAVKNIKCD---VTAQAFLEETAVMTKLHHKNLVRLLGVILH---NGLY 74 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCC-----ceEEEeecCc---chHHHHHHHHHHHHhCCCCCcCeEEEEEcC---CCcE
Confidence 4688889999999999999875332 2334443321 234678899999999999999999998864 4579
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+.+++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++...
T Consensus 75 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 75 IVMELMSKGNLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVG 150 (254)
T ss_pred EEEECCCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceec
Confidence 999999999999999654 2346899999999999999999999998 999999999999999999999999998754
Q ss_pred CCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 335 PETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 335 ~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
... ......+..|+|||.+.++.++.++|||||||++|||++ |..||...........+....
T Consensus 151 ~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------------- 214 (254)
T cd05083 151 SMG-VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY--------------- 214 (254)
T ss_pred ccc-CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---------------
Confidence 322 223344578999999988889999999999999999997 999998765544332222110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
....+..++..+.+++.+||+.+|.+||++.+|++.|++
T Consensus 215 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 215 --RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 001123445788999999999999999999999998864
No 255
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-38 Score=320.73 Aligned_cols=262 Identities=18% Similarity=0.244 Sum_probs=193.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
..+|.+.+.||+|+||.||++...+.. ..+.+++|.... ...+.+|+++|+.++|||||++++++... ...
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~-~~~~v~vK~~~~------~~~~~~E~~il~~l~h~~iv~~~~~~~~~--~~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDE-QRKKVIVKAVTG------GKTPGREIDILKTISHRAIINLIHAYRWK--STV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCc-cceeEEEEeccc------cccHHHHHHHHHhcCCCCccceeeeEeeC--CEE
Confidence 357999999999999999999764432 334444443321 13456899999999999999999988765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|+|||++. ++|.+++. ....+++..++.++.||+.||.|||+++ ||||||||+|||++.++.++|+|||++..
T Consensus 162 ~lv~e~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~ 234 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACK 234 (392)
T ss_pred EEEehhcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccc
Confidence 99999985 68888883 3456999999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH----HhHhhhcc--cc-cc
Q 011995 334 IPETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE----RNLVKWSR--PF-LA 402 (473)
Q Consensus 334 ~~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~----~~~~~~~~--~~-~~ 402 (473)
..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+...... ..++.... +. ..
T Consensus 235 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 235 LDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred cCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 54332 1245689999999999998999999999999999999999999976543211 11111000 00 00
Q ss_pred ccc--cccc---ccccccCCCC--C-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 403 DDC--RLSL---IMDPQLKGRF--P-----LKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 403 ~~~--~~~~---~~~~~l~~~~--~-----~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
... .+.. ......+..+ + ...+.++.+||.+||..||.+|||+.|++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 0000 0000000000 0 1234678899999999999999999999875
No 256
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.5e-38 Score=315.17 Aligned_cols=254 Identities=14% Similarity=0.161 Sum_probs=195.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||++..... .+.+++++.... ........+.+|+.++..++|+||+++++++.+. +.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNA---DKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE--NN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCC---CCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--CE
Confidence 4688889999999999999987554 344455554321 1222334578899999999999999999988765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|+||||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~ 150 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCL 150 (332)
T ss_pred EEEEEeccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchhe
Confidence 99999999999999999642 346899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC---ccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 333 HIPETD---ISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 333 ~~~~~~---~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
...... .....+|+.|+|||++. ...++.++|||||||++|||++|+.||...........+... .
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~------~ 224 (332)
T cd05623 151 KLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH------K 224 (332)
T ss_pred ecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCC------C
Confidence 553222 12346899999999986 345889999999999999999999999876544433222110 0
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE--RPTMRSIFEE 451 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 451 (473)
... .. ......++.++.+|+.+|+..++.+ |+++.++++.
T Consensus 225 ~~~------~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 225 ERF------QF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ccc------cC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 000 00 0112345688999999988665444 6899999877
No 257
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.6e-38 Score=302.87 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=195.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||+|...++ .+.+++++.+... ......+.+|+.+++.++||||+++++++... +..+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~~ik~~~~~~-~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~--~~~~ 82 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNT---GELAAIKVIKLEP-GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR--DKLW 82 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCC---CcEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEEE
Confidence 4677779999999999999985443 3445566554432 23345678999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 83 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd06645 83 ICMEFCGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQI 156 (267)
T ss_pred EEEeccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence 99999999999999853 346899999999999999999999999 999999999999999999999999998755
Q ss_pred CCC--CccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 335 PET--DISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
... ......++..|+|||++. ...++.++|||||||++|||++|..||................
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~----------- 225 (267)
T cd06645 157 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSN----------- 225 (267)
T ss_pred cCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccC-----------
Confidence 322 123346788999999984 4558899999999999999999999986554332221111000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...+.... ...++..+.+++.+||+.||++||++.+|++
T Consensus 226 ~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 226 FQPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00000100 1124467899999999999999999999886
No 258
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.1e-38 Score=315.48 Aligned_cols=254 Identities=13% Similarity=0.155 Sum_probs=195.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||++..... .+.+++|+.... ........+.+|+.++..++|+||+.+++++.+. +.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~--~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHT---ERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE--NY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCC---CCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--CE
Confidence 4788899999999999999986543 344555554321 1222345578899999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.|+||||+++|+|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~ 150 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCL 150 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEecccee
Confidence 99999999999999999642 346899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCc---cCcccccccCChhhhhc-----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 333 HIPETDI---SNSSVAAANLSVETLER-----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 333 ~~~~~~~---~~~~~t~~y~aPE~~~~-----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
....... ....+++.|+|||++.+ +.++.++|||||||++|||++|+.||......+....+... .
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~------~ 224 (331)
T cd05624 151 KMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH------E 224 (331)
T ss_pred eccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcC------C
Confidence 6643322 22468899999999875 46789999999999999999999999876544332222110 0
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 011995 405 CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSE--RPTMRSIFEE 451 (473)
Q Consensus 405 ~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 451 (473)
... .+. .....++.++.+++.+||..++.+ |++++++++.
T Consensus 225 ~~~------~~p-~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 225 ERF------QFP-SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred Ccc------cCC-CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 000 000 011235678999999999866544 4688888764
No 259
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.3e-38 Score=316.78 Aligned_cols=240 Identities=16% Similarity=0.189 Sum_probs=185.0
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC---CCCCcccceeeeecCCCCceEEEE
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL---QHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
||+|+||+||+|+... ..+.+++|+..... .......+..|..++..+ +||||+.+++++... +..|+||
T Consensus 1 lG~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~--~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKD---TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD--SDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECC---CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC--CeEEEEE
Confidence 7999999999998543 33455566543221 122334456677777665 699999999988766 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~ 337 (473)
||+.+|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 76 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 76 DYMSGGELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTD 149 (330)
T ss_pred cCCCCChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCC
Confidence 99999999998853 346899999999999999999999999 999999999999999999999999998754322
Q ss_pred --CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 338 --DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 338 --~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
......+|..|+|||++.+. .++.++|||||||++|||++|..||......+....+..... .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--------------~ 215 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV--------------R 215 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC--------------C
Confidence 22345789999999998765 489999999999999999999999987654443222211100 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCC----CHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERP----TMRSIFE 450 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RP----t~~eil~ 450 (473)
+. ....+.++.+|+.+||..||.+|| ++.++++
T Consensus 216 ~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 216 FP---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CC---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 00 112457889999999999999998 5666665
No 260
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.4e-37 Score=299.30 Aligned_cols=247 Identities=18% Similarity=0.285 Sum_probs=195.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC--------hhhHhHHHHHHHHHhCCCCCcccceeeeec
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--------QGVKEFINDVNTLASLQHPNLCKLLGFHAR 247 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~ 247 (473)
+|.....||.|+||.||+|....+ .+.++++........ ...+.+.+|+.++++++||||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASS---GELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD 77 (267)
T ss_pred CccccceeecCCCeEEEEEEecCC---CcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe
Confidence 367779999999999999985432 334445544332211 123568899999999999999999999876
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
. +..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|
T Consensus 78 ~--~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~d 149 (267)
T cd06628 78 A--DHLNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISD 149 (267)
T ss_pred C--CccEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecc
Confidence 5 788999999999999999954 246889999999999999999999998 99999999999999999999999
Q ss_pred cCCCcccCCCC--------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc
Q 011995 328 YGCAGHIPETD--------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 328 FGla~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 399 (473)
||+++...... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...........+.
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~---- 225 (267)
T cd06628 150 FGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG---- 225 (267)
T ss_pred cCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHh----
Confidence 99987664221 112346788999999988889999999999999999999999998654332211110
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.... ..++...+..+.+++.+||+.||.+||++.+|++
T Consensus 226 ---------~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 226 ---------ENAS----PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ---------ccCC----CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0011 1223455688999999999999999999999986
No 261
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=9.3e-38 Score=310.31 Aligned_cols=263 Identities=18% Similarity=0.187 Sum_probs=190.7
Q ss_pred Ccceeec--CCceEEEEEECCCCeeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 180 DRCISEG--LSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 180 ~~~lG~G--~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
..+||+| +|++||++.... +++.+++|....... ......+.+|+++++.++||||+++++++..+ +..++|
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~lv 77 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKP---TGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELWVV 77 (327)
T ss_pred hhhccccccceEEEEEEeecc---cCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--CEEEEE
Confidence 4789999 678999998543 345555665554432 23345677899999999999999999999876 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.++++||+.......
T Consensus 78 ~e~~~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~ 153 (327)
T cd08227 78 TSFMAYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIN 153 (327)
T ss_pred EeccCCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccc
Confidence 99999999999985432 335899999999999999999999999 99999999999999999999999986543221
Q ss_pred CC---------ccCcccccccCChhhhhc--CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhH-hhhcccccccc
Q 011995 337 TD---------ISNSSVAAANLSVETLER--GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNL-VKWSRPFLADD 404 (473)
Q Consensus 337 ~~---------~~~~~~t~~y~aPE~~~~--~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~-~~~~~~~~~~~ 404 (473)
.. .....++..|+|||++.+ ..++.++|||||||++|||++|..||........... .....+...+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (327)
T cd08227 154 HGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 233 (327)
T ss_pred ccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccc
Confidence 10 112245677999999976 3589999999999999999999999976443221110 00000000000
Q ss_pred c-----c-------------cccc---------cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 405 C-----R-------------LSLI---------MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 405 ~-----~-------------~~~~---------~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. . .... ........+....+..+.+|+.+||+.||++|||+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0 0 0000 00000011223456789999999999999999999999873
No 262
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.2e-38 Score=302.50 Aligned_cols=253 Identities=22% Similarity=0.349 Sum_probs=200.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|+||.||++..... .+.++++.............+.+|++++++++||||+++++++... +..+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPT---GKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN--GDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCC---CcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC--CEEE
Confidence 3577779999999999999986532 3444555554443445567899999999999999999999998776 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+|+||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+ ++|+||||+||+++.++.++|+|||++..
T Consensus 76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~ 150 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQ 150 (265)
T ss_pred EEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchh
Confidence 9999999999999995432 578999999999999999999999 88 99999999999999999999999999876
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH--HHhHhhhccccccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE--ERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..........++..|++||.+.+..++.++||||||+++|+|++|..||....... ....... +.
T Consensus 151 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------------~~ 217 (265)
T cd06605 151 LVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQY-------------IV 217 (265)
T ss_pred hHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHH-------------Hh
Confidence 54332223567789999999998899999999999999999999999997543111 1111110 00
Q ss_pred ccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLK-AARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
... ....+.. .+.++.++|.+||..||.+|||+.+++..
T Consensus 218 ~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 218 NEP-PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred cCC-CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 000 0011222 66789999999999999999999999853
No 263
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=9.5e-38 Score=308.43 Aligned_cols=262 Identities=18% Similarity=0.237 Sum_probs=185.5
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
..||+|+||.||+|+..+.. ..+.++++.... ......+.+|+++++.++||||+++++++........++||||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~-~~~~~a~k~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGK-DEKEYALKQIEG---TGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCCC-ccceEEEEEecC---CCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 68999999999999865432 334444544332 12235678999999999999999999998765557889999998
Q ss_pred cCCChhhhhhcC------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee----CCCCcEEEeccCC
Q 011995 261 FHGSLDRLIYGR------SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI----DKDFSAKLSGYGC 330 (473)
Q Consensus 261 ~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl----~~~~~vkl~DFGl 330 (473)
.+ +|.+++... .....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 64 777776421 12235889999999999999999999999 9999999999999 5668999999999
Q ss_pred CcccCCC-----CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-------HhH---h
Q 011995 331 AGHIPET-----DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-------RNL---V 394 (473)
Q Consensus 331 a~~~~~~-----~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-------~~~---~ 394 (473)
++..... ......+|..|+|||++.+. .++.++|||||||++|||+||.+||........ ... .
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 9866432 12334678899999998764 489999999999999999999999975432110 000 0
Q ss_pred h---------hcccc-cccccccc------cccccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 395 K---------WSRPF-LADDCRLS------LIMDPQLK---GRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 395 ~---------~~~~~-~~~~~~~~------~~~~~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. |.... ........ ......+. ..........+.+++.+||+.||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 0 00000 00000000 00000000 0001123456889999999999999999999986
No 264
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.8e-38 Score=306.28 Aligned_cols=248 Identities=20% Similarity=0.306 Sum_probs=197.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.+|...+.||+|+||.||+|....+ ...++++...... ....+.+.+|+.+++.++|+||+++++++... +..+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~---~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~ 92 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIAT---GQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVG--DELW 92 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCC---CCEEEEEEEecCc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecC--CEEE
Confidence 5788889999999999999985432 3445555554332 23346688999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++...
T Consensus 93 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~ 165 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (297)
T ss_pred EeecccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEc
Confidence 99999999999999843 35889999999999999999999999 999999999999999999999999998765
Q ss_pred CCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.... .....+++.|++||.+.+..++.++|||||||++|+|++|..||...........+ .. .
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~------~~---------~ 230 (297)
T cd06656 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI------AT---------N 230 (297)
T ss_pred cCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee------cc---------C
Confidence 4332 12345778999999999888999999999999999999999999765432211100 00 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.......+...+..+.+|+.+||..||++||++.+|++
T Consensus 231 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 231 GTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00001123445677899999999999999999999998
No 265
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.5e-37 Score=302.10 Aligned_cols=265 Identities=20% Similarity=0.255 Sum_probs=197.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||.||+|....+ ++.+++++..... .....+.+.+|+.+++.++|+||+++++++... ...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRET---GQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK--RKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCC---CcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC--CEE
Confidence 4688889999999999999986543 3344455443222 223345678999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||++++.|..++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++..
T Consensus 76 ~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (286)
T cd07847 76 HLVFEYCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARI 149 (286)
T ss_pred EEEEeccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECcccccee
Confidence 999999999888877632 345899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCC--ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh-hcccccc-------
Q 011995 334 IPETD--ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK-WSRPFLA------- 402 (473)
Q Consensus 334 ~~~~~--~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~-~~~~~~~------- 402 (473)
..... .....++..|+|||.+.+ ..++.++|||||||++|||++|..||.+....+....+. .......
T Consensus 150 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 150 LTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred cCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcc
Confidence 64432 223456788999999876 457899999999999999999999998765543322211 0000000
Q ss_pred cccccccccccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 403 DDCRLSLIMDPQLKGRF-----PLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..........+...... ....+..+.+|+.+||+.||++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00000000111111000 1134678899999999999999999999985
No 266
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.4e-37 Score=298.82 Aligned_cols=255 Identities=23% Similarity=0.338 Sum_probs=201.4
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||.|+||+||+|...++ ...+++++............+.+|+++++.++|+||+++++.+... +..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPN---NEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG--DELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCC---CcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC--CEEE
Confidence 4788899999999999999986543 2344455554443344667899999999999999999999988765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|+||+++++|.+++........+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++...
T Consensus 76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~ 152 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASL 152 (267)
T ss_pred EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHh
Confidence 99999999999999965433356899999999999999999999999 999999999999999999999999998765
Q ss_pred CCCCc------cCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 335 PETDI------SNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 335 ~~~~~------~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
..... ....++..|++||.+... .++.++|+|||||++|||++|+.||............... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-----~---- 223 (267)
T cd06610 153 ADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-----D---- 223 (267)
T ss_pred ccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-----C----
Confidence 43221 223567899999999777 6899999999999999999999999765443221111100 0
Q ss_pred ccccccccCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 408 SLIMDPQLKGR-FPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 408 ~~~~~~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.+.+... .....+..+.+++.+||..||++||++.+|++
T Consensus 224 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 ----PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ----CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0001000 01245688899999999999999999999986
No 267
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.3e-39 Score=315.41 Aligned_cols=250 Identities=20% Similarity=0.310 Sum_probs=194.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~ 253 (473)
..|++.+.||+||.+.||++...+... .++.+++......+....|.+|+.+|.+| .|.+||+|++|-..+ +.+
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~i---yalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d--~~l 435 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQI---YALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD--GYL 435 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcc---hhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC--ceE
Confidence 457788999999999999998655432 11223333345667788999999999999 699999999998776 899
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
||||||= ..+|..+|.++. .....| .++.+..|++.++.++|.++ |||.||||.|+|+-. |.+||+|||+|..
T Consensus 436 YmvmE~G-d~DL~kiL~k~~-~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~a 508 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKK-SIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANA 508 (677)
T ss_pred EEEeecc-cccHHHHHHhcc-CCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcc
Confidence 9999975 559999996543 223334 88899999999999999999 999999999999864 5899999999988
Q ss_pred cCCCCc----cCcccccccCChhhhhcC-----------CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc
Q 011995 334 IPETDI----SNSSVAAANLSVETLERG-----------LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 334 ~~~~~~----~~~~~t~~y~aPE~~~~~-----------~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 398 (473)
+..+.. ...+||+.||+||.+... ..+.++||||||||||+|+.|++||...... |+
T Consensus 509 I~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~-------~a- 580 (677)
T KOG0596|consen 509 IQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ-------IA- 580 (677)
T ss_pred cCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH-------HH-
Confidence 865533 345899999999998532 2567899999999999999999999753211 11
Q ss_pred cccccccccccccccccCCCCCHHHH-HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 399 PFLADDCRLSLIMDPQLKGRFPLKAA-RTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
++..+.+|.-.-.|+..-. .++.++++.||+.||.+||++.++|+.
T Consensus 581 -------Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 581 -------KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred -------HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 3444555544334443222 339999999999999999999999863
No 268
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.2e-37 Score=295.70 Aligned_cols=253 Identities=22% Similarity=0.418 Sum_probs=199.5
Q ss_pred cccCcceeecCCceEEEEEECCCC-eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDA-STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
|++.+.||.|+||.||++...+.. .....+++|+............+..|+.++..++|+||+++++++.+. +..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE--EPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--CeeEE
Confidence 345688999999999999976533 122444455544333333567899999999999999999999998776 78999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
+|||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 79 i~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEeccCCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecc
Confidence 999999999999995432 122899999999999999999999999 9999999999999999999999999997665
Q ss_pred CCCccC---cccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 336 ETDISN---SSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 336 ~~~~~~---~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
...... ..++..|++||.+.+..++.++|||||||+++||++ |.+||...........+.... .
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-------~----- 222 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-------R----- 222 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-------C-----
Confidence 432211 235678999999988889999999999999999998 889987654433322221100 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
...+...+.++.+++.+||..||.+|||+.++++.|
T Consensus 223 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 -----LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011223567899999999999999999999999864
No 269
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.1e-37 Score=304.44 Aligned_cols=250 Identities=19% Similarity=0.259 Sum_probs=194.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|++.+.||.|+||.||+|....+. +.+++++.... .....+.+.+|+.+++.++|+||+++++++..+ ...+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~---~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 85 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETG---ALAAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFYWD--GKLW 85 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCC---ceEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC--CeEE
Confidence 56888899999999999999865433 33444443322 334567788999999999999999999998766 6899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+++++|..++... ...+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||++...
T Consensus 86 lv~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 86 IMIEFCPGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred EEEecCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999998887542 345899999999999999999999998 999999999999999999999999988654
Q ss_pred CCC--CccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 335 PET--DISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
... ......++..|+|||.+. ...++.++|||||||++|||++|..||.......... .+...
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~-------- 230 (292)
T cd06644 161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL--KIAKS-------- 230 (292)
T ss_pred cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHH--HHhcC--------
Confidence 322 123345678999999984 3446889999999999999999999997654332211 11000
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..+. ...+..++.++.+++.+||..||++||++.++++
T Consensus 231 ---~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 231 ---EPPT--LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---CCcc--CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0113345577899999999999999999999986
No 270
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-39 Score=310.05 Aligned_cols=249 Identities=20% Similarity=0.269 Sum_probs=203.4
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
+.|..-++||+||||.||-+..+ .++|.++.+....+ ....+..-.++|-.+|.+++.+.||.+--.|.+. +.
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvr---aTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk--d~ 259 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVR---ATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK--DA 259 (591)
T ss_pred cceeeeEEEecccccceeEEEEe---cchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC--Cc
Confidence 55788899999999999999844 35555555432211 1334555678899999999999999997666555 89
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|||+..|+||+|.-+|+... .+.|++..+..++.+|+.||++||... ||+||+||+|||||+.|+++|+|+|||.
T Consensus 260 LClVLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAv 335 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAV 335 (591)
T ss_pred eEEEEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEE
Confidence 999999999999999887653 467999999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCc-cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 333 HIPETDI-SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 333 ~~~~~~~-~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
.+..... ...+||.+|||||++.++.|+...|.|||||+||||+.|+.||.....+....-++.. .+.
T Consensus 336 ei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr--~~~--------- 404 (591)
T KOG0986|consen 336 EIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR--TLE--------- 404 (591)
T ss_pred ecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH--Hhc---------
Confidence 9877654 4449999999999999999999999999999999999999999876544433212110 111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMR 446 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 446 (473)
....++...++++.+|....|.+||++|.-.+
T Consensus 405 ---~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 405 ---DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred ---chhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 12245778889999999999999999997655
No 271
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.7e-38 Score=304.42 Aligned_cols=265 Identities=18% Similarity=0.252 Sum_probs=198.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||.||+|...++ .+.+++++..... .......+.+|+++++.++|+||+++++++... +..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~---~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKAT---GEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK--GRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCC---CcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC--CEE
Confidence 4688889999999999999986543 3344444433322 333457789999999999999999999999775 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||++++.+..++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..
T Consensus 76 ~iv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~ 149 (288)
T cd07833 76 YLVFEYVERTLLELLEAS---PGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARA 149 (288)
T ss_pred EEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccc
Confidence 999999988777665532 345899999999999999999999999 99999999999999999999999999877
Q ss_pred cCCCC---ccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc------
Q 011995 334 IPETD---ISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD------ 403 (473)
Q Consensus 334 ~~~~~---~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~------ 403 (473)
..... .....++..|+|||++.+. .++.++||||||+++|+|++|++||...........+.........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 150 LRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred cCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhc
Confidence 65432 2334567889999999888 7899999999999999999999999866543322211110000000
Q ss_pred --ccccc--ccccc----ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 --DCRLS--LIMDP----QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 --~~~~~--~~~~~----~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..... ...+. .....++..++.++.+||.+||..+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000 00000 0011223345788999999999999999999999985
No 272
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.5e-38 Score=328.73 Aligned_cols=274 Identities=15% Similarity=0.180 Sum_probs=189.0
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeE------------E--EEEEEecCCCChhhHhHHHHHHHHHhCCCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKK------------F--EATVTRLNPSSQGVKEFINDVNTLASLQHPN 237 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn 237 (473)
...++|++.+.||+|+||.||+|.++........ . .+..+...........+.+|+.+|.+++|+|
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 3457899999999999999999876432211000 0 0011111222334567889999999999999
Q ss_pred cccceeeeecCCCCceEEEEEeccCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCce
Q 011995 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI 315 (473)
Q Consensus 238 Iv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NI 315 (473)
||++++++... +..|+|+|++. ++|.+++..... ........+..|+.||+.||.|||+++ ||||||||+||
T Consensus 225 Iv~l~~~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NI 298 (501)
T PHA03210 225 ILKIEEILRSE--ANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENI 298 (501)
T ss_pred cCcEeEEEEEC--CeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHE
Confidence 99999999876 78899999984 577777643211 122345667889999999999999999 99999999999
Q ss_pred eeCCCCcEEEeccCCCcccCCCC---ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCC-CCCCChHHHH
Q 011995 316 QIDKDFSAKLSGYGCAGHIPETD---ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKN-LDSRHPKEER 391 (473)
Q Consensus 316 Ll~~~~~vkl~DFGla~~~~~~~---~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p-~~~~~~~~~~ 391 (473)
||+.++.+||+|||++..+.... .....+|..|+|||++.+..++.++|||||||++|||++|..+ |.........
T Consensus 299 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 299 FLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred EECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 99999999999999998764332 1235689999999999999999999999999999999998754 4332221111
Q ss_pred h---Hhhhccc----cccccccccccccc----ccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 392 N---LVKWSRP----FLADDCRLSLIMDP----QLKGRFP-----LKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 392 ~---~~~~~~~----~~~~~~~~~~~~~~----~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. .+..... +......+...++. .....++ .....++.+++.+||+.||.+|||+.|+|..
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1 1111000 00000000000000 0000000 1234567889999999999999999999864
No 273
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=8.6e-38 Score=305.63 Aligned_cols=244 Identities=18% Similarity=0.305 Sum_probs=193.0
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEe
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~ 259 (473)
...||.|+||.||++....+ ...++++..... .....+.+.+|+.+++.++|+||+++++++... +..++||||
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~---~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~~~lv~e~ 100 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHT---GKQVAVKKMDLR-KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG--DELWVVMEF 100 (292)
T ss_pred hhcccCCCCeEEEEEEECCC---CCEEEEEEEecc-hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC--CeEEEEEeC
Confidence 36799999999999985433 334445544322 233456788999999999999999999998765 789999999
Q ss_pred ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC-
Q 011995 260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD- 338 (473)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~- 338 (473)
+++++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++.......
T Consensus 101 ~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 101 LEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 999999998832 35899999999999999999999999 9999999999999999999999999987553221
Q ss_pred -ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCC
Q 011995 339 -ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG 417 (473)
Q Consensus 339 -~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 417 (473)
.....++..|+|||.+.+..++.++|||||||++|||++|..||...........+... ..+.+..
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-------------~~~~~~~ 240 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN-------------LPPRVKD 240 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-------------CCCcccc
Confidence 12345788999999998888999999999999999999999999865543322221110 0111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 418 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....+..+.+++.+||..||.+|||+.++++.
T Consensus 241 --~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 --SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 12345678999999999999999999999975
No 274
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.6e-37 Score=303.22 Aligned_cols=246 Identities=19% Similarity=0.233 Sum_probs=199.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...+.||+|+||.||++....+ .+.+++++..... .......+.+|++++++++||||+++++++... ..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGS---GKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD--SN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCC---CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC--Ce
Confidence 4688889999999999999986543 3445555544321 223456788999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||+|.|||++.++.+||+|||++.
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~ 149 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAK 149 (290)
T ss_pred EEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence 99999999999999998543 46899999999999999999999999 9999999999999999999999999988
Q ss_pred ccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 333 HIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 333 ~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... .....+++.|++||.+.+..++.++||||||+++|+|++|..||...........+...
T Consensus 150 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------------- 213 (290)
T cd05580 150 RVKGR-TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--------------- 213 (290)
T ss_pred ccCCC-CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---------------
Confidence 76544 34456788999999998888899999999999999999999999765533222111100
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFE 450 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~ 450 (473)
...++...+..+.+++.+||..||.+|+ +++++++
T Consensus 214 ---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 214 ---KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ---CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 0112334467889999999999999999 7777764
No 275
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.6e-37 Score=299.62 Aligned_cols=255 Identities=23% Similarity=0.341 Sum_probs=198.6
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC--
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG-- 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~-- 249 (473)
.+++|+..+.||.|+||.||+|..... ...+++++... .......+.+|+.+++++ .|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~---~~~~~~k~~~~--~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKT---GQLVAIKIMDI--IEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCC---CcEEEEEEEec--CchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 468899999999999999999986543 33444554443 233456789999999999 7999999999987642
Q ss_pred --CCceEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 250 --SDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 250 --~~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
...+++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEEC
Confidence 356899999999999999885422 2457899999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCC--ccCcccccccCChhhhhc-----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc
Q 011995 327 GYGCAGHIPETD--ISNSSVAAANLSVETLER-----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 327 DFGla~~~~~~~--~~~~~~t~~y~aPE~~~~-----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|||++....... .....++..|+|||.+.. ..++.++|||||||++|+|++|..||...........+...
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-- 233 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN-- 233 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc--
Confidence 999987653321 233457889999999854 24678999999999999999999999765433222111100
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..+.+ ..+...+.++.+|+.+||..||.+|||+.++++
T Consensus 234 -----------~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 234 -----------PPPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -----------CCCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00001 112345678999999999999999999999986
No 276
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.7e-37 Score=306.69 Aligned_cols=251 Identities=19% Similarity=0.220 Sum_probs=198.0
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC--hhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|+..+.||+|+||.||+|...+ ..+.+++|........ ...+.+..|++++..++|+||+++++++... ..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKG---TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE--TY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcC---CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC--CE
Confidence 368888999999999999998654 3345555555443222 3456789999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.|+||||+.+++|.+++... ....+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~ 151 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSK 151 (316)
T ss_pred EEEEEEecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhh
Confidence 99999999999999998643 3457899999999999999999999999 9999999999999999999999999886
Q ss_pred ccCCCC-------------------------------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCC
Q 011995 333 HIPETD-------------------------------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKN 381 (473)
Q Consensus 333 ~~~~~~-------------------------------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p 381 (473)
...... .....++..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~p 231 (316)
T cd05574 152 QSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP 231 (316)
T ss_pred cccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCC
Confidence 542211 1123567889999999988899999999999999999999999
Q ss_pred CCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC----HHHHHH
Q 011995 382 LDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT----MRSIFE 450 (473)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~eil~ 450 (473)
|...........+.. ...........+..+.+++.+||+.||++||+ +.+++.
T Consensus 232 f~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 232 FKGSNRDETFSNILK----------------KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCCCchHHHHHHHhc----------------CCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 987654332221110 00000001125688999999999999999999 777666
No 277
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.6e-37 Score=301.55 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=191.3
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHH-HHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNT-LASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|++.+.||+|+||.||++.... .++.++++.............+..|+.+ ++.++|+||+++++++..+ ...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~--~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVP---TGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE--GDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcC---CCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC--CcE
Confidence 478888999999999999998543 3455556655444333344566677775 5667999999999999765 679
Q ss_pred EEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 254 MLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
++||||++ |+|.+++... .....+++..+..++.||+.||+|||++ + ++||||||+|||++.++.+||+|||++
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~ 151 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGIS 151 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecccc
Confidence 99999996 6888877542 2345789999999999999999999997 7 999999999999999999999999998
Q ss_pred cccCCCCc-cCcccccccCChhhhhc----CCCCCcCCchHHHHHHHHHHcCCCCCCCCChH-HHHhHhhhccccccccc
Q 011995 332 GHIPETDI-SNSSVAAANLSVETLER----GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK-EERNLVKWSRPFLADDC 405 (473)
Q Consensus 332 ~~~~~~~~-~~~~~t~~y~aPE~~~~----~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 405 (473)
........ ....++..|+|||.+.+ ..++.++|+|||||++|||++|+.||...... +....+. .
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~------~--- 222 (283)
T cd06617 152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV------E--- 222 (283)
T ss_pred cccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH------h---
Confidence 76643322 23467889999998865 34688999999999999999999999653221 1110000 0
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...+.+. ...++.++.+++.+||..+|.+||++.+|++
T Consensus 223 ----~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 223 ----EPSPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ----cCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000010 1234678999999999999999999999987
No 278
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.6e-37 Score=295.50 Aligned_cols=248 Identities=23% Similarity=0.329 Sum_probs=196.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC----CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
+|+..+.||+|+||.||+|....+. ..++++...... .....+.+.+|+++++.++|+||+++++++... .
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDG---DFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE--D 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCC---cEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC--C
Confidence 4677799999999999999875332 233344433321 233457789999999999999999999998765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++|+||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+|+||+|+||+++.++.+||+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~ 149 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMA 149 (258)
T ss_pred eEEEEEEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccc
Confidence 89999999999999999854 235889999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....... .....++..|++||.+.... ++.++|+|||||++|+|++|+.||...........+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~------------ 217 (258)
T cd06632 150 KQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS------------ 217 (258)
T ss_pred eeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc------------
Confidence 7654332 23456788899999997766 899999999999999999999999765432222111100
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.....++..++..+.+++.+||+.+|.+||++.+++.
T Consensus 218 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 218 ----KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ----ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0001123445688899999999999999999999985
No 279
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.1e-37 Score=300.91 Aligned_cols=263 Identities=19% Similarity=0.283 Sum_probs=199.2
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
+|+..+.||.|++|.||+|+...+ +..+++++............+.+|++++++++|+||+++++++... +..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTT---GEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE--NKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCC---CeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC--CcEEE
Confidence 578889999999999999996443 3455666665544444456788999999999999999999999876 78899
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+++ +|.+++........+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 76 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~ 151 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFG 151 (284)
T ss_pred EEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence 9999975 89888865443456899999999999999999999999 9999999999999999999999999987553
Q ss_pred CC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh-hh-cccccccccccccc
Q 011995 336 ET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV-KW-SRPFLADDCRLSLI 410 (473)
Q Consensus 336 ~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 410 (473)
.. ......++..|++||.+.+. .++.++|||||||++|+|++|..||.+....+....+ .. ..+.. . ....+
T Consensus 152 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~ 228 (284)
T cd07836 152 IPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTE-S--TWPGI 228 (284)
T ss_pred CCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCh-h--hHHHH
Confidence 22 12334567889999998664 4789999999999999999999999876544332211 11 00000 0 00000
Q ss_pred cc-cccC-----------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 411 MD-PQLK-----------GRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 411 ~~-~~l~-----------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.+ +.+. ..+....+..+.+++.+||+.||.+||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 229 SQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0000 0111234678899999999999999999999985
No 280
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.3e-37 Score=305.04 Aligned_cols=245 Identities=20% Similarity=0.317 Sum_probs=194.1
Q ss_pred cCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEE
Q 011995 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 179 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
....||+|+||.||++.... ....+++++..... ....+.+.+|+.++..++||||+++++++..+ +..++|||
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~---~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~iv~e 98 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKH---SGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG--EELWVLME 98 (297)
T ss_pred hhhhcCCCCceeEEEEEEcC---CCCEEEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhheeeC--CeEEEEEe
Confidence 34689999999999998543 23344555544332 23356788999999999999999999998765 78999999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD 338 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~ 338 (473)
|+++++|..++.. ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 99 FLQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 171 (297)
T ss_pred cCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc
Confidence 9999999988732 35899999999999999999999999 9999999999999999999999999987554322
Q ss_pred --ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccC
Q 011995 339 --ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK 416 (473)
Q Consensus 339 --~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 416 (473)
.....++..|+|||++.+..++.++|||||||++|||++|..||...........+.... ....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-------------~~~~- 237 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP-------------PPKL- 237 (297)
T ss_pred ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC-------------CCCc-
Confidence 233467889999999988889999999999999999999999997655433322221100 0000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 417 GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 417 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
......+..+.+++.+||+.+|.+||++.+|++.
T Consensus 238 -~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 238 -KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred -cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0122345678999999999999999999999984
No 281
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3e-37 Score=299.14 Aligned_cols=246 Identities=22% Similarity=0.344 Sum_probs=198.0
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
|+..+.||+|+||.||+|....+ ...+++++............+.+|+.++.+++|+||+++++++..+ +..++|
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 80 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRT---QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD--TKLWII 80 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCC---CcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC--CeEEEE
Confidence 55668999999999999985443 3445555544443344556788999999999999999999998766 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|||+++++|.+++.. ..+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 81 MEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 153 (277)
T ss_pred EEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceeccc
Confidence 999999999999842 35899999999999999999999999 99999999999999999999999999876543
Q ss_pred CC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 337 TD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 337 ~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
.. .....++..|++||.+.+..++.++|||||||++|+|++|..||...........+...
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----------------- 216 (277)
T cd06641 154 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN----------------- 216 (277)
T ss_pred chhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-----------------
Confidence 32 12335678899999998888899999999999999999999999765433222211100
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....++..++.++.+++.+||+.+|.+||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 217 NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0011233456788999999999999999999999984
No 282
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.9e-37 Score=295.00 Aligned_cols=250 Identities=18% Similarity=0.240 Sum_probs=199.5
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|+..+.||+|+||.||++...+ ....++++...... .......+.+|+++++.++|+||+++++++... +..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKA---DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED--KALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcC---CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC--CEEE
Confidence 47788999999999999998644 33445555554332 334467789999999999999999999988755 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~DFGla~~ 333 (473)
+||||+++++|.+++... ....+++..+..++.+++.+|.|||+++ ++|+||+|+||+++.+ +.+||+|||++..
T Consensus 76 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred EEEecCCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence 999999999999999653 2445899999999999999999999999 9999999999999855 5689999999987
Q ss_pred cCCCCc-cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 334 IPETDI-SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 334 ~~~~~~-~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
...... ....++..|+|||.+.+..++.++||||||+++|+|++|..||...........+....
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-------------- 217 (256)
T cd08220 152 LSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-------------- 217 (256)
T ss_pred cCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC--------------
Confidence 654322 23456789999999988889999999999999999999999997765433222111100
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...++...+..+.+++.+||..||++|||+.++++.
T Consensus 218 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 218 ---FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ---CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 011233456789999999999999999999999863
No 283
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.4e-37 Score=297.76 Aligned_cols=251 Identities=20% Similarity=0.335 Sum_probs=197.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-----ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
+|+..+.||+|+||.||+|... .....+++++...... ......+.+|+.++++++|+||+++++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-- 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDV---KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED-- 75 (268)
T ss_pred CccccceecCcCceEEEEEEEc---CCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC--
Confidence 5788899999999999999843 3345566666553321 12356789999999999999999999998765
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-cEEEeccC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF-SAKLSGYG 329 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-~vkl~DFG 329 (473)
+..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++ .+||+|||
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg 149 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFG 149 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccc
Confidence 789999999999999999854 346899999999999999999999999 99999999999998775 59999999
Q ss_pred CCcccCCCCc------cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 330 CAGHIPETDI------SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 330 la~~~~~~~~------~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
++........ ....++..|+|||.+.+..++.++|||||||++++|++|..||...........+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----- 224 (268)
T cd06630 150 AAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA----- 224 (268)
T ss_pred cccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh-----
Confidence 9876643211 12356789999999988889999999999999999999999997543222111111000
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.......++...+.++.+++.+||..+|++||++.++++
T Consensus 225 --------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 225 --------SATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --------ccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 001112235566788999999999999999999999985
No 284
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.8e-37 Score=305.16 Aligned_cols=254 Identities=17% Similarity=0.189 Sum_probs=196.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|+..+.||+|+||.||++..... .+.++++...... .......+.+|+++++.++|+||+++++.+..+ +.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~---~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKET---RQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK--RH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCC---CcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC--CE
Confidence 4788889999999999999986543 3444455443321 123345788999999999999999999988765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++
T Consensus 76 ~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~ 149 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSK 149 (305)
T ss_pred EEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCcc
Confidence 9999999999999999954 246899999999999999999999998 9999999999999999999999999886
Q ss_pred ccCCC-----------------CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh
Q 011995 333 HIPET-----------------DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 333 ~~~~~-----------------~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~ 395 (473)
..... ......++..|+|||.+.+..++.++|||||||++|||++|..||.+....+....+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~ 229 (305)
T cd05609 150 IGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI 229 (305)
T ss_pred ccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 42100 0012345778999999988889999999999999999999999998655433222211
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDR 454 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 454 (473)
... ...+.. ....+.++.+++.+||+.||++||++.++++.|+.
T Consensus 230 ~~~-----------~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 230 SDD-----------IEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred hcc-----------cCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 110 000000 11355778999999999999999997777766665
No 285
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=8.9e-39 Score=295.09 Aligned_cols=280 Identities=18% Similarity=0.174 Sum_probs=201.1
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhCCCCCcccceeeee
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHA 246 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~ 246 (473)
+-++....|+....||+|+||.||+|.-.+... -.+.+++|...-... ...-....+|+.+++.++|||||.|..++.
T Consensus 18 ~rve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl 97 (438)
T KOG0666|consen 18 ERVEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFL 97 (438)
T ss_pred hhHHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHh
Confidence 334556678999999999999999996443322 123344443332222 223466889999999999999999999887
Q ss_pred cCCCCceEEEEEeccCCChhhhhhc--CCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC----
Q 011995 247 RDGSDQRMLIYERLFHGSLDRLIYG--RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---- 320 (473)
Q Consensus 247 ~~~~~~~~lV~E~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---- 320 (473)
.. ...++|++||.++ +|..+|+- ......++...+..|+.||+.|+.|||++. |+||||||.|||+..+
T Consensus 98 ~~-d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgper 172 (438)
T KOG0666|consen 98 SH-DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPER 172 (438)
T ss_pred cc-CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCcc
Confidence 64 3789999999977 88888743 233467899999999999999999999999 9999999999999877
Q ss_pred CcEEEeccCCCcccCCC-----CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHH-----
Q 011995 321 FSAKLSGYGCAGHIPET-----DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKE----- 389 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~-----~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~----- 389 (473)
|.|||+|||+++.+.+. .....++|++|.|||.+.|.. |+.+.|||++|||+.||+|-++.|.+...+.
T Consensus 173 G~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~P 252 (438)
T KOG0666|consen 173 GRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNP 252 (438)
T ss_pred CeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCC
Confidence 99999999999987543 234568899999999998876 9999999999999999999999997654321
Q ss_pred ----HHhHhhhc--------cccccccccccc-ccccccCCCCC----------HHHHHHHHHHHHHhcccCCCCCCCHH
Q 011995 390 ----ERNLVKWS--------RPFLADDCRLSL-IMDPQLKGRFP----------LKAARTVADIALRCLQKEPSERPTMR 446 (473)
Q Consensus 390 ----~~~~~~~~--------~~~~~~~~~~~~-~~~~~l~~~~~----------~~~~~~l~~li~~cl~~dP~~RPt~~ 446 (473)
+.+.|... +|.+........ +.+-+.....+ ..-+....+|+.++|..||-+|.|++
T Consensus 253 fq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~ 332 (438)
T KOG0666|consen 253 FQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAE 332 (438)
T ss_pred chHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHH
Confidence 11111100 011110000000 00000000000 01123478999999999999999999
Q ss_pred HHHHHHH
Q 011995 447 SIFEELD 453 (473)
Q Consensus 447 eil~~L~ 453 (473)
+.++..=
T Consensus 333 qAleh~y 339 (438)
T KOG0666|consen 333 QALEHPY 339 (438)
T ss_pred HHhcccc
Confidence 9887643
No 286
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.5e-37 Score=294.73 Aligned_cols=250 Identities=18% Similarity=0.259 Sum_probs=200.2
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|+..+.||+|+||.||.+....+ .+.++++..... .......++.+|+.+++.++|+||+++++++... +..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKED---GKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN--GNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCC---CCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC--CeEE
Confidence 477889999999999999986443 344555554432 2334456889999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+.+++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++...
T Consensus 76 lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~ 151 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVL 151 (256)
T ss_pred EEEecCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeec
Confidence 999999999999988543 2345789999999999999999999998 999999999999999999999999999766
Q ss_pred CCCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... ....++..|+|||++.+..++.++|||||||++++|++|..||......+....+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-------------- 217 (256)
T cd08218 152 NSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-------------- 217 (256)
T ss_pred CcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC--------------
Confidence 44322 22356788999999988889999999999999999999999997655433222111000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
....+...+.++.++|.+||+.+|++||++.+|++.
T Consensus 218 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 218 ---YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ---CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 011233456789999999999999999999999873
No 287
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.4e-37 Score=298.16 Aligned_cols=255 Identities=13% Similarity=0.241 Sum_probs=198.2
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC---------CCChhhHhHHHHHHHHHh-CCCCCcccceeee
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---------PSSQGVKEFINDVNTLAS-LQHPNLCKLLGFH 245 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~g~~ 245 (473)
+|+..+.||+|+||.||+|....+ ..+.++++..... .......++.+|+.++.+ ++|+||+++++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 78 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNN--GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF 78 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCC--CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence 477789999999999999997652 1234444443322 122334567889998875 7999999999998
Q ss_pred ecCCCCceEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCCceeeCCCCcE
Q 011995 246 ARDGSDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTANIQIDKDFSA 323 (473)
Q Consensus 246 ~~~~~~~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~NILl~~~~~v 323 (473)
..+ +..++||||+++++|.+++... .....+++..+..++.|++.||.|||+ .+ ++|+||+|+|||++.++.+
T Consensus 79 ~~~--~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~ 153 (269)
T cd08528 79 LEN--DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKV 153 (269)
T ss_pred ccC--CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcE
Confidence 766 7899999999999999887432 234568999999999999999999996 56 9999999999999999999
Q ss_pred EEeccCCCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccc
Q 011995 324 KLSGYGCAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 324 kl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
+|+|||++...... ......++..|++||.+.+..++.++||||||+++|||++|..||...........+....
T Consensus 154 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~---- 229 (269)
T cd08528 154 TITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAV---- 229 (269)
T ss_pred EEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhcc----
Confidence 99999999776544 2234467889999999998889999999999999999999999997654433222111000
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
..+. .....+..+.+++.+||+.||++||++.|+..+|.
T Consensus 230 --------~~~~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 --------YEPL----PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred --------CCcC----CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0000 01134578899999999999999999999999875
No 288
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.8e-37 Score=301.74 Aligned_cols=267 Identities=19% Similarity=0.235 Sum_probs=199.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||.|+||.||+|....+. +.++++..+... .......+.+|+.++.+++||||+++++++.....+..
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTG---EIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCC---cEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence 57888899999999999999975433 334444444332 22233467789999999999999999999876655789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|+||||+. ++|.+++... ...+++..+..++.||+.||+|||+.+ ++|+||||+|||++.++.+||+|||++..
T Consensus 82 ~lv~e~~~-~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred EEEehhcC-cCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceee
Confidence 99999996 5999888543 236899999999999999999999999 99999999999999999999999999886
Q ss_pred cCCC--CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh--cccc------c-
Q 011995 334 IPET--DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW--SRPF------L- 401 (473)
Q Consensus 334 ~~~~--~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~------~- 401 (473)
.... ......++..|+|||.+.+.. ++.++||||||+++|||++|.+||...........+.. ..+. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 156 YGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred ccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 6443 223345678899999987644 68999999999999999999999987655443322210 0000 0
Q ss_pred ----ccccccccccccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 402 ----ADDCRLSLIMDPQLKGRFPLK-AARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 402 ----~~~~~~~~~~~~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.............+...++.. .+..+.++|.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000011111122223333 5778999999999999999999999986
No 289
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.4e-37 Score=302.19 Aligned_cols=264 Identities=17% Similarity=0.203 Sum_probs=192.3
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|+..+.||+|+||.||+|....+ ++.++++...... .......+.+|++++++++|+||+++++++.+. ...+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~---g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRET---HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD--KKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCC---CcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC--CceE
Confidence 477789999999999999986543 3344555544332 222345678899999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|+||+. ++|.+++... ...+++..+..++.||+.||.|||+.+ |+|+||||+||+++.++.+||+|||++...
T Consensus 76 lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 149 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAF 149 (284)
T ss_pred EEEecCC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhcc
Confidence 9999996 5888877532 346899999999999999999999999 999999999999999999999999998765
Q ss_pred CCC--CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChH-HHHhHhhhccccccccc--ccc
Q 011995 335 PET--DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPK-EERNLVKWSRPFLADDC--RLS 408 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~--~~~ 408 (473)
... ......++..|+|||.+.+.. ++.++|||||||++|||++|..||...... .....+........... ...
T Consensus 150 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 150 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred CCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhh
Confidence 332 223345678999999987654 789999999999999999998886433322 21111100000000000 000
Q ss_pred cccc----cccC-----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 409 LIMD----PQLK-----GRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 409 ~~~~----~~l~-----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...+ +... .......+.++.+++.+||+.||.+|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 0000 0112245678999999999999999999999986
No 290
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.8e-37 Score=295.49 Aligned_cols=250 Identities=23% Similarity=0.389 Sum_probs=196.3
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|...+.||+|+||.||+|....+ .+.+++++...... ......+.+|+++++.++|+||+++++++... +..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDT---GELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR--EKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCC---CcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC--CEEE
Confidence 477789999999999999986443 34455555554432 24567899999999999999999999988665 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|+||+++++|.+++.. ...+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++...
T Consensus 76 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~ 149 (264)
T cd06626 76 IFMEYCSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKL 149 (264)
T ss_pred EEEecCCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccccccccc
Confidence 99999999999999853 345889999999999999999999999 999999999999999999999999998776
Q ss_pred CCCCc------cCcccccccCChhhhhcCC---CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 335 PETDI------SNSSVAAANLSVETLERGL---LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 335 ~~~~~------~~~~~t~~y~aPE~~~~~~---~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
..... ....++..|++||++.+.. ++.++||||||+++|||++|+.||............ ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~---~~------ 220 (264)
T cd06626 150 KNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH---VG------ 220 (264)
T ss_pred CCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH---Hh------
Confidence 43321 1235678999999998766 889999999999999999999999765322211100 00
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
....+.+.. ...++..+.+++.+||+.+|.+||++.+++.
T Consensus 221 ---~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 221 ---AGHKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---cCCCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000111110 1234677889999999999999999999875
No 291
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.3e-37 Score=302.64 Aligned_cols=265 Identities=17% Similarity=0.248 Sum_probs=196.2
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|+||.||+|...++. +.+++++..... .....+.+.+|+++++.++|+||+++++++..+ ...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~---~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETG---QIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK--KRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCC---CEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC--CeE
Confidence 46888899999999999999975432 334444433222 223456788999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||+++++|..+... ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 76 ~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~ 149 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFART 149 (286)
T ss_pred EEEEecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeee
Confidence 999999999999887643 235899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCC--ccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh-ccccccc------
Q 011995 334 IPETD--ISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW-SRPFLAD------ 403 (473)
Q Consensus 334 ~~~~~--~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~------ 403 (473)
..... .....++..|+|||++.+. .++.++|||||||++|||++|.+||......+....+.. ...+...
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07846 150 LAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQ 229 (286)
T ss_pred ccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhc
Confidence 54322 2334567899999998653 478899999999999999999999976554332221111 0000000
Q ss_pred -ccccccccccccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 -DCRLSLIMDPQLKG-----RFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 -~~~~~~~~~~~l~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.........+.... .....++..+.+|+.+||+.+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000000000 001245678999999999999999999999986
No 292
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.8e-37 Score=295.49 Aligned_cols=250 Identities=18% Similarity=0.251 Sum_probs=199.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC----CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
.+|...+.||+|+||.||+|.... ..+.++++...... .......+.+|++++++++|+||+++++++.+...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDAD---TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcC---CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC
Confidence 478889999999999999998543 34455565544321 23345678899999999999999999999876544
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
..+++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~ 152 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAY---GALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGA 152 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccc
Confidence 6789999999999999998532 35889999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCC-----CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 331 AGHIPET-----DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 331 a~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
++..... ......++..|+|||.+.+..++.++|||||||++|||++|+.||.............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---------- 222 (264)
T cd06653 153 SKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA---------- 222 (264)
T ss_pred ccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH----------
Confidence 8765321 1123457789999999988889999999999999999999999997654333221111
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.......++...+..+.+++.+||+ ++..||++.+++.
T Consensus 223 ------~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 223 ------TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ------cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0111123456677889999999999 5799999998875
No 293
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.9e-37 Score=300.00 Aligned_cols=265 Identities=19% Similarity=0.270 Sum_probs=198.9
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|++.+.||+|+||.||+|....+ ++.+++++..... .......+.+|+.++++++|+||+++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~---~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRET---GETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG--SGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCC---CceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC--CeeE
Confidence 477889999999999999986543 3444455544432 233456789999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+ +++|.+++... ...+++..+..++.||+.||+|||+.+ ++|+||||+||+++.++.++|+|||++...
T Consensus 76 ~v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~ 149 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLF 149 (286)
T ss_pred EEeccc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccc
Confidence 999999 99999998543 356999999999999999999999999 999999999999999999999999998876
Q ss_pred CCCC---ccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh--ccc------ccc
Q 011995 335 PETD---ISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW--SRP------FLA 402 (473)
Q Consensus 335 ~~~~---~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~------~~~ 402 (473)
.... .....++..|+|||.+.+.. ++.++|||||||+++||++|.++|...........+.. ..+ ...
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 150 SEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred cCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 5432 34456788999999986544 68999999999999999999988876654332221110 000 000
Q ss_pred cccccccccccccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 403 DDCRLSLIMDPQLK----GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 403 ~~~~~~~~~~~~l~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+......+..+... .....+.+..+.+++.+||..||.+||+++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000000000 00112345889999999999999999999999864
No 294
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.3e-37 Score=300.84 Aligned_cols=265 Identities=17% Similarity=0.225 Sum_probs=193.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||+|++|.||+|....+ .+.+++|.............+.+|+++++.++|+||+++++++.++ +..+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLT---GQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTK--KTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCC---CcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecC--CeEE
Confidence 5788889999999999999985433 3445566554433333345677899999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+.+ +|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++...
T Consensus 80 lv~e~~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 80 LVFEYLDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred EEEecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECcccccccc
Confidence 99999974 999988543 236899999999999999999999999 999999999999999999999999998654
Q ss_pred CCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChH-HHHhHhhhccccccccc-----
Q 011995 335 PET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPK-EERNLVKWSRPFLADDC----- 405 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~----- 405 (473)
... ......++..|+|||.+.+ ..++.++|||||||++|||++|..||...... +....+...........
T Consensus 154 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 154 SVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred CCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence 321 1223346788999999865 45889999999999999999999999765421 11111100000000000
Q ss_pred --------ccccccccccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 406 --------RLSLIMDPQLKGRFP-LKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 406 --------~~~~~~~~~l~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.........+....+ .....++.+++.+||+.||.+|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000000000000 011267889999999999999999999885
No 295
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.1e-37 Score=295.07 Aligned_cols=252 Identities=20% Similarity=0.300 Sum_probs=203.3
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+..+.||.|++|.||+|+..+ ..+.+++++............+.+|+..+.+++|+||+++++++... ...+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~---~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKP---TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE--GEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcC---CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC--CeEE
Confidence 468888999999999999998654 33455555555443334567899999999999999999999998766 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~ 149 (264)
T cd06623 76 IVLEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKV 149 (264)
T ss_pred EEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCcccee
Confidence 999999999999999543 568999999999999999999999 98 99999999999999999999999999887
Q ss_pred cCCCCcc--CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 334 IPETDIS--NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~~~~~~--~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
....... ...++..|+|||.+.+..++.++||||||+++|+|++|..||.............+..
T Consensus 150 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~------------- 216 (264)
T cd06623 150 LENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC------------- 216 (264)
T ss_pred cccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-------------
Confidence 6543322 3456789999999998889999999999999999999999997764211111121111
Q ss_pred ccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLK-AARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
... ....+.. .+..+.+++.+||..+|++||++.++++.
T Consensus 217 ~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 217 DGP-PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred cCC-CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000 0111223 56889999999999999999999999874
No 296
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=4.3e-37 Score=297.73 Aligned_cols=248 Identities=21% Similarity=0.330 Sum_probs=196.9
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC---CCCcccceeeeecCCCCc
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~~ 252 (473)
.|+..+.||+|+||.||+|....+ .+.+++++...........++.+|+.+++.++ |+|++++++++... ..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~--~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPT---GRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG--PR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCC---CcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC--CE
Confidence 477779999999999999986433 34555665554444455677889999999996 99999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAA 149 (277)
T ss_pred EEEEEecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCcee
Confidence 9999999999999998843 26899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC--ccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 333 HIPETD--ISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 333 ~~~~~~--~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
...... .....++..|+|||.+.++ .++.++|||||||++|+|++|..||...........+. .
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~-------------~ 216 (277)
T cd06917 150 LLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP-------------K 216 (277)
T ss_pred ecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc-------------c
Confidence 664432 2334577889999998754 46899999999999999999999997654332211110 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+.+.. ...+.++.+++.+||..||++||++.++++.
T Consensus 217 ~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 217 SKPPRLED---NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 00111111 1245789999999999999999999999874
No 297
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=346.03 Aligned_cols=254 Identities=21% Similarity=0.335 Sum_probs=205.0
Q ss_pred HHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC
Q 011995 171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG 249 (473)
Q Consensus 171 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~ 249 (473)
...+-+|+.+..||.|.||.||.|... .++...++|-+++.. .......+.+|+.++..+.|||+|++||+-...
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~---~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR- 1306 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNL---DTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR- 1306 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecC---CccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH-
Confidence 345677889999999999999999844 444555555555543 344567889999999999999999999987765
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
+.++|.||||.+|+|.+.+. .+...++.....+..|++.|+.|||++| ||||||||+||||+.+|.+|++|||
T Consensus 1307 -ekv~IFMEyC~~GsLa~ll~---~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1307 -EKVYIFMEYCEGGSLASLLE---HGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred -HHHHHHHHHhccCcHHHHHH---hcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeeccc
Confidence 78999999999999999993 4556778888889999999999999999 9999999999999999999999999
Q ss_pred CCcccCCC------CccCcccccccCChhhhhcCC---CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc
Q 011995 330 CAGHIPET------DISNSSVAAANLSVETLERGL---LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF 400 (473)
Q Consensus 330 la~~~~~~------~~~~~~~t~~y~aPE~~~~~~---~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 400 (473)
.|..+.+. ......||+.|||||++.+.. -..++||||+|||++||+||+.||...+.. |+.-+
T Consensus 1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy 1452 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMY 1452 (1509)
T ss_pred ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHh
Confidence 99876443 124557899999999997643 457899999999999999999999765432 21111
Q ss_pred cccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. +...-.+++|...+.+-.+|+..||+.||.+|.++.|+++.
T Consensus 1453 -----~----V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1453 -----H----VAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -----H----HhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1 11112234577899999999999999999999999877754
No 298
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.3e-37 Score=296.29 Aligned_cols=253 Identities=19% Similarity=0.326 Sum_probs=194.2
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC---------ChhhHhHHHHHHHHHhCCCCCcccceeeee
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---------SQGVKEFINDVNTLASLQHPNLCKLLGFHA 246 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~ 246 (473)
+|...+.||.|+||.||+|....+ +..++++..+.... ....+.+.+|+.+++.++|+||+++++++.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~---~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTT---GEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCC---CceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec
Confidence 467789999999999999985433 33444554432211 112346788999999999999999999987
Q ss_pred cCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 247 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
.. +..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+
T Consensus 79 ~~--~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~ 150 (272)
T cd06629 79 TE--EYLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKIS 150 (272)
T ss_pred cC--CceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEe
Confidence 65 7899999999999999998543 46899999999999999999999998 9999999999999999999999
Q ss_pred ccCCCcccCCC----CccCcccccccCChhhhhcCC--CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccc
Q 011995 327 GYGCAGHIPET----DISNSSVAAANLSVETLERGL--LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPF 400 (473)
Q Consensus 327 DFGla~~~~~~----~~~~~~~t~~y~aPE~~~~~~--~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 400 (473)
|||++...... ......++..|++||.+.... ++.++||||||+++|||++|..||.............
T Consensus 151 d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----- 225 (272)
T cd06629 151 DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLG----- 225 (272)
T ss_pred eccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhh-----
Confidence 99998765322 112335678999999987654 7899999999999999999999997544332211100
Q ss_pred cccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.. . ....+.......++..+.+++.+||..||.+||++.+|++.
T Consensus 226 -~~--~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 226 -NK--R----SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred -cc--c----cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00 0 01111111223456889999999999999999999999864
No 299
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.9e-37 Score=301.26 Aligned_cols=259 Identities=14% Similarity=0.157 Sum_probs=185.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhh----------HhHHHHHHHHHhCCCCCcccceee
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV----------KEFINDVNTLASLQHPNLCKLLGF 244 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~Ei~~l~~l~HpnIv~l~g~ 244 (473)
+.|.+.+.||+|+||.||+|...++....+.+++++.......... .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999997665333344444444333221111 112234445666789999999987
Q ss_pred eecCCC--CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc
Q 011995 245 HARDGS--DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322 (473)
Q Consensus 245 ~~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~ 322 (473)
+..... ...++++|++. .++.+.+.. ....++..+..++.|++.||+|||+.+ |+||||||+|||++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 654321 13467777763 366666632 224678889999999999999999998 999999999999999999
Q ss_pred EEEeccCCCcccCCC---------CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-Hh
Q 011995 323 AKLSGYGCAGHIPET---------DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RN 392 (473)
Q Consensus 323 vkl~DFGla~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~ 392 (473)
++|+|||+++.+... ......+|+.|+|||++.+..++.++|||||||++|||++|..||........ ..
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 999999999765321 11223688999999999999999999999999999999999999986632221 11
Q ss_pred H--hhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 393 L--VKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 393 ~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
. ..+... +....+ .....+..+.+++..||..+|++||++.+|++.|+
T Consensus 245 ~~~~~~~~~----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKCDFIKR----------LHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHHHHHHH----------hhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1 111000 000000 01234578999999999999999999999998764
No 300
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-38 Score=287.16 Aligned_cols=252 Identities=16% Similarity=0.253 Sum_probs=203.5
Q ss_pred HhcccccC-cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeec--C
Q 011995 173 ACHNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHAR--D 248 (473)
Q Consensus 173 ~~~~f~~~-~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~--~ 248 (473)
.+++|.+. .+||-|-.|.|-.+. +..++.++++|+.+ .....++|+++.-.. .|||||.++++|.. .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~---~k~T~ekfALKvL~------Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCV---HKRTQEKFALKVLL------DSPKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEE---eccchhhhHHHHHh------cCHHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 56777654 689999999999998 55567777777654 235567899987766 79999999998864 3
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC---CCCcEEE
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID---KDFSAKL 325 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~---~~~~vkl 325 (473)
+..++.+|||.|+||.|+..+..+ ....|++.++..|+.||..|+.|||+.+ |.||||||+|+|.. .|..+||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEe
Confidence 457889999999999999999765 4567999999999999999999999999 99999999999996 4567999
Q ss_pred eccCCCcccC-CCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCCh----HHHHhHhhhcccc
Q 011995 326 SGYGCAGHIP-ETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHP----KEERNLVKWSRPF 400 (473)
Q Consensus 326 ~DFGla~~~~-~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~----~~~~~~~~~~~~~ 400 (473)
+|||+|+... .....+.+.|+.|.|||++...+|+...|+||+||++|-|++|.+||...+. ..+...|.-..-
T Consensus 206 tDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy- 284 (400)
T KOG0604|consen 206 TDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQY- 284 (400)
T ss_pred cccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCc-
Confidence 9999998765 4456777899999999999999999999999999999999999999965432 111111111000
Q ss_pred cccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 401 LADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+...-...+++.+.++|+.+|..+|.+|.|+.+++..
T Consensus 285 -------------~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 285 -------------EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred -------------cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 01111135788999999999999999999999999864
No 301
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.2e-37 Score=300.18 Aligned_cols=267 Identities=15% Similarity=0.194 Sum_probs=194.4
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++++|...+.||+|+||.||+|....+ ...+++|+............+.+|+.+++.++|+||+++++++..+ +.
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRIN---GQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTK--ET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCC---CcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC--Ce
Confidence 357899999999999999999985433 3445566555443334445678999999999999999999998765 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.|+||||+. ++|.+++... ...+.+..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||+++
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 151 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLAR 151 (291)
T ss_pred EEEEEeccc-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEecccccc
Confidence 999999995 6777776432 245788889999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc---
Q 011995 333 HIPET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR--- 406 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 406 (473)
..... ......++..|+|||.+.+. .++.++|||||||++|||++|..||.............|..........
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 152 AKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred ccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhh
Confidence 54322 12333568899999998654 4788999999999999999999999865543221111111000000000
Q ss_pred ---c----ccccccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 407 ---L----SLIMDPQLKGRF-----PLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 407 ---~----~~~~~~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. ............ .......+.+++.+|+..||.+|||+.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 000000000000 0012467889999999999999999999875
No 302
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.3e-37 Score=300.72 Aligned_cols=264 Identities=18% Similarity=0.239 Sum_probs=194.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|+..+.||.|++|.||+|+...+ ...++++...... .......+.+|++++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLT---GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE--NKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCC---CCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC--CcEE
Confidence 578889999999999999986543 3344455444332 222345788999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+. ++|..++... ....+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++...
T Consensus 76 ~v~e~~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~ 150 (284)
T cd07860 76 LVFEFLH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF 150 (284)
T ss_pred EEeeccc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhc
Confidence 9999995 6898888653 2456899999999999999999999999 999999999999999999999999998765
Q ss_pred CCC--CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh-Hhhhccccccc-------
Q 011995 335 PET--DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN-LVKWSRPFLAD------- 403 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~------- 403 (473)
... ......++..|+|||.+.+.. ++.++|||||||++|||+||..||.......... ...+.......
T Consensus 151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 151 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 230 (284)
T ss_pred ccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhH
Confidence 332 223335678899999886644 6889999999999999999999997655433221 11111000000
Q ss_pred ----ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 ----DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 ----~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...........+ .......+.++.++|.+||+.||.+|||++++++
T Consensus 231 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 231 LPDYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000 0011234567889999999999999999999985
No 303
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.1e-37 Score=296.29 Aligned_cols=265 Identities=20% Similarity=0.229 Sum_probs=192.1
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCceEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~~~l 255 (473)
|...+.||+|+||.||+|....+ .+.++++...............+|+.++.++. |+||+++++++.+...+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~---~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKT---GKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCC---CcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence 55678999999999999985433 33444554433222223344567999999985 999999999988764468999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+. |+|.+.+... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++. +.+||+|||++....
T Consensus 78 v~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 78 VFELMD-MNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred EEecCC-ccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 999996 5888887542 246899999999999999999999999 999999999999999 999999999997664
Q ss_pred CCC-ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc----ccc---
Q 011995 336 ETD-ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD----DCR--- 406 (473)
Q Consensus 336 ~~~-~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----~~~--- 406 (473)
... .....++..|+|||.+.. ..++.++|||||||++|||++|..||.+.+..+....+......... ...
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 151 SKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred cCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 332 233456789999998754 45789999999999999999999999876654322211100000000 000
Q ss_pred cccccccccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 407 LSLIMDPQLKG----RFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 407 ~~~~~~~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
......+.... ......+..+.++|.+||++||++||++.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00000000000 0112457889999999999999999999999863
No 304
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.9e-37 Score=299.17 Aligned_cols=265 Identities=19% Similarity=0.241 Sum_probs=196.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC----ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
+|...+.||+|+||.||+|....+ ...++++..+.... ......+..|+++++.++|+||+++++++.+. +
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKET---GRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK--S 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCC---CcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC--C
Confidence 477778999999999999986543 33445555443321 22345677899999999999999999999875 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+ +|+|.+++.... ..+++..+..++.||+.||.|||+++ |+|+||+|+|||++.++.++|+|||++
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~ 149 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLA 149 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceee
Confidence 899999999 899999995432 36999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc-ccccccc---
Q 011995 332 GHIPET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS-RPFLADD--- 404 (473)
Q Consensus 332 ~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~--- 404 (473)
...... ......++..|+|||.+.+ ..++.++|||||||++|||++|.++|...........+... .......
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 150 RSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred eeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhh
Confidence 766443 2233355788999999865 45789999999999999999998888765543322221100 0000000
Q ss_pred -cccccccccccC-----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 405 -CRLSLIMDPQLK-----GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 405 -~~~~~~~~~~l~-----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
............ .......+..+.+++.+||..||.+|||+.|+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000000 01123456789999999999999999999999984
No 305
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.1e-36 Score=296.78 Aligned_cols=246 Identities=19% Similarity=0.307 Sum_probs=194.6
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
|...+.||+|++|.||++....+ ...+++++.... .....+.+.+|+.+++.++|+||+++++++... +..++|
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~---~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~--~~~~~v 94 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKST---GRQVAVKKMDLR-KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG--DELWVV 94 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCC---CCEEEEEEEecc-chhHHHHHHHHHHHHHHcCCCChheEEEEEEcC--CeEEEE
Confidence 44448999999999999985433 234445544332 223456688999999999999999999988765 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
+||+.+++|.+++.. ..+++..+..++.|++.||+|||+++ |+||||+|+||+++.++.++|+|||++.....
T Consensus 95 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~ 167 (285)
T cd06648 95 MEFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK 167 (285)
T ss_pred EeccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhcc
Confidence 999999999999854 35899999999999999999999999 99999999999999999999999998865533
Q ss_pred CC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 337 TD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 337 ~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
.. .....++..|+|||.+.+..++.++|||||||++|||++|..||...........+.... .+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-------------~~~ 234 (285)
T cd06648 168 EVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-------------PPK 234 (285)
T ss_pred CCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-------------CCC
Confidence 21 123457889999999988889999999999999999999999997655433322221110 000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.. .+..++..+.+|+.+||..+|.+||++.++++
T Consensus 235 ~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 235 LK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred Cc--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 00 12235578999999999999999999999996
No 306
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.7e-37 Score=295.08 Aligned_cols=248 Identities=17% Similarity=0.237 Sum_probs=198.7
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
+|+..+.||.|+||.||+|.... ..+.+++++..... .....+.+.+|++++++++||||+++++++.+. +..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRD---TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE--ENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEcc---CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC--CeE
Confidence 57888999999999999998543 33455565554322 224567899999999999999999999988655 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++|+||+.+++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 76 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~ 149 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATK 149 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccc
Confidence 9999999999999999543 46899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 334 IPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 334 ~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.... ......++..|++||.+.+..++.++|+||||+++|+|++|..||............... ..
T Consensus 150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~~--------- 216 (258)
T cd05578 150 VTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ----ET--------- 216 (258)
T ss_pred cCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHh----cc---------
Confidence 6443 223446778999999998888999999999999999999999999876532111111100 00
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH--HHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTM--RSIF 449 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~--~eil 449 (473)
....++...+..+.+++.+||..||.+||++ .|++
T Consensus 217 --~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 --ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 1112344556889999999999999999999 5554
No 307
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.3e-36 Score=295.99 Aligned_cols=252 Identities=23% Similarity=0.350 Sum_probs=201.0
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
..+++|+....||.|+||.||+|..... ...+++++...... ....+.+|+++++.++|+||+++++++... .
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~ 88 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRAT---GKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVG--D 88 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccC---CcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC--C
Confidence 3467788889999999999999986532 33445555543322 567789999999999999999999998876 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++|+||+++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~ 163 (286)
T cd06614 89 ELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFA 163 (286)
T ss_pred EEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchh
Confidence 8999999999999999996532 47999999999999999999999998 999999999999999999999999988
Q ss_pred cccCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHIPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
....... .....++..|++||.+.+..++.++|||||||++|+|++|..||...........+.... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~--------~-- 233 (286)
T cd06614 164 AQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKG--------I-- 233 (286)
T ss_pred hhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--------C--
Confidence 6553321 123346788999999988889999999999999999999999997655433222111000 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+.. .....++..+.+|+.+||+.+|.+||++.++++
T Consensus 234 ---~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 234 ---PPL--KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ---CCC--cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 000 012235678999999999999999999999985
No 308
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=9.5e-37 Score=300.49 Aligned_cols=269 Identities=18% Similarity=0.197 Sum_probs=198.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.++|+..+.||+|+||.||+|..... +..+++|+...... ......+.+|+.++++++|+||+++++++.....+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTS---GEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCC---CcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCe
Confidence 46788999999999999999986543 34455665554432 222345678999999999999999999987654467
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+. ++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~ 156 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLAR 156 (309)
T ss_pred EEEEEecCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceee
Confidence 899999996 4888888542 356899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc-----
Q 011995 333 HIPET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD----- 404 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~----- 404 (473)
..... ......++..|+|||.+.+ ..++.++|||||||++|||++|.+||...........+..........
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 157 TYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred ecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 76433 2223345788999999865 457899999999999999999999998776554433222110000000
Q ss_pred ---cccccc-cccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 405 ---CRLSLI-MDPQLKGRF---PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 405 ---~~~~~~-~~~~l~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...... ........+ ....+..+.++|.+||+.||.+|||+.+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000 000000000 01246778899999999999999999999864
No 309
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.9e-37 Score=299.83 Aligned_cols=255 Identities=19% Similarity=0.268 Sum_probs=191.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|...+.||+|+||.||++....+ ...++++.............+.+|+.++.++. |+||+++++++..+ ...+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~--~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPS---GTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE--GDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCC---CCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC--CcEE
Confidence 445558899999999999986543 34455555444333455677899999999996 99999999988765 7789
Q ss_pred EEEEeccCCChhhhhhc--CCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 255 LIYERLFHGSLDRLIYG--RSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
++|||+.. +|.++... ......+++..+..++.|++.||+|||+. + ++||||||+|||++.++.+||+|||++
T Consensus 80 ~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 80 ICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred EEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchh
Confidence 99999854 65544321 11235689999999999999999999975 6 999999999999999999999999998
Q ss_pred cccCCCC-ccCcccccccCChhhhhcC---CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERG---LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~---~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
....... .....++..|+|||.+.+. .++.++|||||||++|||++|..||......... .... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~----~~----- 225 (288)
T cd06616 156 GQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQ-LTQV----VK----- 225 (288)
T ss_pred HHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHH-Hhhh----cC-----
Confidence 7654332 2334678899999999776 6899999999999999999999999764421110 0000 00
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...+.+.......++.++.+|+.+||+.||++|||+.+|++.
T Consensus 226 --~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 226 --GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred --CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001111112223466789999999999999999999999875
No 310
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.7e-36 Score=287.79 Aligned_cols=249 Identities=23% Similarity=0.355 Sum_probs=199.2
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
+|...+.||+|++|.||++....+ .+.+++++...... .....+.+|+++++.++|+||+++++++..+ ...++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l 74 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRT---GKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKK--DELWI 74 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCC---CcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEEE
Confidence 467779999999999999997543 23344444433222 3567899999999999999999999998776 78999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
++||+++++|.+++... ...+++..+..++.|++.+|.|||..+ ++|+||+|+||+++.++.++|+|||.+....
T Consensus 75 ~~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 149 (253)
T cd05122 75 VMEFCSGGSLKDLLKST--NQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLS 149 (253)
T ss_pred EEecCCCCcHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccc
Confidence 99999999999998543 256899999999999999999999998 9999999999999999999999999987765
Q ss_pred CCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 336 ETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 336 ~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
... .....++..|++||.+.+..++.++||||||+++|+|++|+.||............... ... .
T Consensus 150 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~-----~ 216 (253)
T cd05122 150 DTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN--------GPP-----G 216 (253)
T ss_pred ccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc--------CCC-----C
Confidence 443 23456778999999998888999999999999999999999999876443332221110 000 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+. .....+..+.+++.+||+.||.+|||+.++++
T Consensus 217 ~~--~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 217 LR--NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cC--cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 01123578999999999999999999999986
No 311
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.9e-37 Score=299.86 Aligned_cols=249 Identities=21% Similarity=0.315 Sum_probs=196.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|...+.||+|+||.||++....+ .+.++++..... .....+.+.+|+.+++.++||||+++++++... +..+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~---~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~ 92 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVAT---GQEVAIKQMNLQ-QQPKKELIINEILVMRENKHPNIVNYLDSYLVG--DELW 92 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCC---CCEEEEEEeccc-cchHHHHHHHHHHHHhhcCCCCeeehhheeeeC--CcEE
Confidence 6788889999999999999985432 234445544322 223356788999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|+||+++++|.+++.. ..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...
T Consensus 93 lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~ 165 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (293)
T ss_pred EEEecCCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecc
Confidence 99999999999999843 24789999999999999999999999 999999999999999999999999988655
Q ss_pred CCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
.... .....+++.|++||.+.+..++.++|||||||++|+|++|+.||...........+. . .
T Consensus 166 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~------~---------~ 230 (293)
T cd06647 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA------T---------N 230 (293)
T ss_pred cccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehh------c---------C
Confidence 4332 223356788999999988889999999999999999999999997654332211000 0 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.......+...+..+.+++.+||..+|.+||++.+++..
T Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 231 GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000001123455778999999999999999999999975
No 312
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=8.7e-37 Score=296.53 Aligned_cols=244 Identities=18% Similarity=0.218 Sum_probs=184.7
Q ss_pred ceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHH---hCCCCCcccceeeeecCCCCceEEE
Q 011995 182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLA---SLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 182 ~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~---~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
.||+|+||.||++...++ .+.++++...... .......+.+|..++. ..+|+||+.+++++... +..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADT---GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--DKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCC---CcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--CeEEEE
Confidence 489999999999986443 3344455443321 1122233445544433 34799999999888765 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.....
T Consensus 76 ~e~~~~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 76 LDLMNGGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSK 149 (279)
T ss_pred EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccc
Confidence 999999999998853 346999999999999999999999999 99999999999999999999999999876544
Q ss_pred CCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 337 TDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 337 ~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
.......++..|+|||.+.+ ..++.++|||||||++|||++|..||............... . ..
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-----------~----~~ 214 (279)
T cd05633 150 KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-----------L----TV 214 (279)
T ss_pred cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh-----------h----cC
Confidence 33344568899999999864 45899999999999999999999999754332211111100 0 00
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
...++...+.++.+++.+||..||.+|| ++.++++.
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1122445668899999999999999999 59988875
No 313
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.7e-36 Score=298.48 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=194.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
..|...+.||+|+||.||+|....+ ...+++++..... .......+.+|+++++.++||||+++++++... +.
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRT---NEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE--HT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCC---CcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC--Ce
Confidence 4477789999999999999986543 3344555544322 233446789999999999999999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++||||+. |+|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~ 163 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVH--KKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSAS 163 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcce
Confidence 899999996 5777777432 346899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 333 HIPETDISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 333 ~~~~~~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
..... ....++..|+|||.+. ...++.++||||||+++|||++|..||...........+.+..+
T Consensus 164 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~---------- 231 (307)
T cd06607 164 LVSPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS---------- 231 (307)
T ss_pred ecCCC--CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC----------
Confidence 65432 2345678899999874 35688999999999999999999999977654332221111100
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.+ .....+..+.+++.+||..||++||++.+|+..
T Consensus 232 ---~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 232 ---PTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred ---CCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 122356789999999999999999999999874
No 314
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2e-36 Score=295.82 Aligned_cols=267 Identities=17% Similarity=0.214 Sum_probs=194.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC--
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS-- 250 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~-- 250 (473)
++|+..+.||+|+||.||+|....+ .+.+++++..... .......+.+|+.+++.+ +|+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~---~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 77 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNT---GKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNG 77 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCC---CcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCC
Confidence 4788889999999999999986543 3445555544432 222346788999999999 46999999998876421
Q ss_pred -CceEEEEEeccCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC-CCcEEEe
Q 011995 251 -DQRMLIYERLFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK-DFSAKLS 326 (473)
Q Consensus 251 -~~~~lV~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~-~~~vkl~ 326 (473)
...|+||||+++ +|.+++..... ...+++..+..++.||+.||.|||+++ |+||||+|+||+++. ++.+||+
T Consensus 78 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~ 153 (295)
T cd07837 78 KPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIA 153 (295)
T ss_pred CceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEe
Confidence 237999999975 89888864322 346899999999999999999999999 999999999999998 8999999
Q ss_pred ccCCCcccCCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh-hhcccccc
Q 011995 327 GYGCAGHIPET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV-KWSRPFLA 402 (473)
Q Consensus 327 DFGla~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~-~~~~~~~~ 402 (473)
|||++..+... ......+++.|+|||++.+ ..++.++|||||||++|||++|..||...........+ ..... .
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~ 231 (295)
T cd07837 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGT--P 231 (295)
T ss_pred ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCC--C
Confidence 99998765322 2233356788999998865 45789999999999999999999999876544332211 10000 0
Q ss_pred ccccccccc-------ccccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 403 DDCRLSLIM-------DPQLK----GRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 403 ~~~~~~~~~-------~~~l~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
......... .+... .......+..+.+||.+||..||.+||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000000 00000 0001235678899999999999999999999985
No 315
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.6e-36 Score=289.94 Aligned_cols=250 Identities=19% Similarity=0.270 Sum_probs=196.6
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|...+.||+|+||.||+|....+. ..++++...... .....+.+.+|+++++.++|+||+++++++... ...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~--~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDS---EHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN--GRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCC---ceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC--CeEE
Confidence 4778899999999999999975543 334455443321 223456788999999999999999999988765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-cEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF-SAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-~vkl~DFGla~~ 333 (473)
+|+||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++ .+||+|||.+..
T Consensus 76 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQ 151 (257)
T ss_pred EEEecCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchh
Confidence 999999999999998653 2346899999999999999999999998 99999999999999885 569999999876
Q ss_pred cCCCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 334 IPETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
...... ....++..|+|||.+.+..++.++|||||||+++||++|..||...........+. . .
T Consensus 152 ~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~-----~------- 217 (257)
T cd08225 152 LNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKIC--Q-----G------- 217 (257)
T ss_pred ccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh--c-----c-------
Confidence 643321 22357788999999988889999999999999999999999997654333221110 0 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.. .......+.++.+++.+||..+|++|||+.++++.
T Consensus 218 --~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 218 --YF-APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred --cC-CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00 01122345789999999999999999999999863
No 316
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-38 Score=290.90 Aligned_cols=240 Identities=17% Similarity=0.237 Sum_probs=200.8
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
++|...++||+|+||.|-+++ ...+++.+++|+.+... ....+..-+.|-.+|...+||.+..|.-.|... +.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~r---EKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~--dr 242 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCR---EKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ--DR 242 (516)
T ss_pred chhhHHHHhcCCccceEEEEe---ecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC--ce
Confidence 455666999999999999998 66678888888765432 334455567789999999999999987667665 89
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|+||||..||.|.-+|. ....+++.....+..+|+.||.|||+++ ||+||||.+|+|+|.+|++||+|||+.+
T Consensus 243 lCFVMeyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCK 316 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCK 316 (516)
T ss_pred EEEEEEEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccch
Confidence 999999999999998884 3456888888999999999999999999 9999999999999999999999999986
Q ss_pred cc--CCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 333 HI--PETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 333 ~~--~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.- ......+.+||+.|+|||++....|+.++|.|.+||++|||++|+.||...+-.....+|...
T Consensus 317 E~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e------------- 383 (516)
T KOG0690|consen 317 EEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME------------- 383 (516)
T ss_pred hcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh-------------
Confidence 43 233456789999999999999999999999999999999999999999876544444443211
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERP 443 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 443 (473)
. -.||...++++..|+..+|.+||.+|.
T Consensus 384 ---d--~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 384 ---D--LKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ---h--ccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 1 135778889999999999999999995
No 317
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=8.1e-37 Score=304.73 Aligned_cols=271 Identities=15% Similarity=0.208 Sum_probs=197.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---C
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---S 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~---~ 250 (473)
+++|++.+.||+|+||.||+|.... ++..+++|+............+.+|+.+++.++|+||+++++++.... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKP---TGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcC---CCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 5789999999999999999998543 334455555433233445567889999999999999999999876432 2
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...++|+||+. ++|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~~lv~e~~~-~~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 81 NDVYIVQELME-TDLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred ceEEEEehhcc-cCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccc
Confidence 45799999996 48888773 235899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCC-----ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 331 AGHIPETD-----ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 331 a~~~~~~~-----~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
+....... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+.......+...... ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~-~~~ 231 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT-PSQ 231 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC-CCH
Confidence 87653221 122356889999998755 45889999999999999999999999765543322111000000 000
Q ss_pred cccccccccc---------cCCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhh
Q 011995 405 CRLSLIMDPQ---------LKGR-----FPLKAARTVADIALRCLQKEPSERPTMRSIFEE--LDRQE 456 (473)
Q Consensus 405 ~~~~~~~~~~---------l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~l~ 456 (473)
.....+.+.. .... .....+.++.+++.+||+.||++|||+.++++. |+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 0000000000 0000 011346778999999999999999999999987 55544
No 318
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=265.70 Aligned_cols=265 Identities=19% Similarity=0.253 Sum_probs=212.0
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhh-HhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|...++||+|+||+||+|+ +..+...++.+..++....++. ....+||-+|+.+.|.|||++++....+ ..+-
T Consensus 3 ~ydkmekigegtygtvfkar---n~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd--kklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKAR---NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD--KKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecc---cCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC--ceeE
Confidence 45556899999999999998 5556677888888888665554 5688999999999999999999987655 7889
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|+|||+. +|..+... -.+.++.+.+..++.|+++||.|+|+++ +.|||+||.|+||+.+|++|++|||+++.+
T Consensus 78 lvfe~cdq-dlkkyfds--lng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglaraf 151 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDS--LNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAF 151 (292)
T ss_pred EeHHHhhH-HHHHHHHh--cCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhc
Confidence 99999955 88888743 3456899999999999999999999999 999999999999999999999999999877
Q ss_pred CCC--CccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccc-
Q 011995 335 PET--DISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSL- 409 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 409 (473)
.-. -++..++|.+|.+|.++.+.. |+...|+||-|||+.|+.. |++.|.+.+-.++...+-|......++.+...
T Consensus 152 gipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred CCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccc
Confidence 533 345668899999999998765 8999999999999999985 88888888777776666665444333323222
Q ss_pred -ccccccCCCCCH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 -IMDPQLKGRFPL---------KAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 -~~~~~l~~~~~~---------~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.|=.....|+. .....-++++.+.|.-+|.+|.++++.++.
T Consensus 232 ~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 232 KLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred cCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 222222222332 334456799999999999999999988763
No 319
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.6e-36 Score=291.36 Aligned_cols=243 Identities=19% Similarity=0.278 Sum_probs=192.7
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
||.|+||.||+++... ..+.+++++..... .....+.+.+|+.+++.++|+||+++++++.++ ...++|+||+
T Consensus 1 lg~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKS---KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--KYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECC---CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--CccEEEEecC
Confidence 6899999999999654 23445555554332 223457799999999999999999999988765 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC-c
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD-I 339 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~-~ 339 (473)
++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 76 ~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~ 149 (262)
T cd05572 76 LGGELWTILRDR---GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKT 149 (262)
T ss_pred CCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccccc
Confidence 999999999543 35899999999999999999999998 9999999999999999999999999998765432 2
Q ss_pred cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCC
Q 011995 340 SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419 (473)
Q Consensus 340 ~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 419 (473)
....++..|++||.+.+..++.++|+||||+++|||++|..||............. +.+......+
T Consensus 150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--------------~~~~~~~~~~ 215 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND--------------ILKGNGKLEF 215 (262)
T ss_pred ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH--------------HhccCCCCCC
Confidence 23466789999999988889999999999999999999999997655211111000 0000111123
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 011995 420 PLKAARTVADIALRCLQKEPSERPT-----MRSIFE 450 (473)
Q Consensus 420 ~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~ 450 (473)
+...+.++.+++.+||+.||.+||+ +.|+++
T Consensus 216 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 216 PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 4444688999999999999999999 777776
No 320
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.8e-36 Score=302.91 Aligned_cols=267 Identities=14% Similarity=0.190 Sum_probs=197.3
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC--
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-- 249 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~-- 249 (473)
..++|+..+.||+|+||.||+|.... ..+.+++|..... ........+.+|+.++++++|+||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTV---TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSL 90 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECC---CCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCc
Confidence 45789999999999999999998543 3344455544322 23334567788999999999999999999876432
Q ss_pred --CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 250 --SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 250 --~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
....|+||||+. ++|.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 91 ~~~~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 91 EEFQDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred cccCcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEcc
Confidence 135799999995 588887732 2888999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccCCCCc-cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh--ccc-----
Q 011995 328 YGCAGHIPETDI-SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW--SRP----- 399 (473)
Q Consensus 328 FGla~~~~~~~~-~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~----- 399 (473)
||++........ ....++..|+|||.+.+..++.++|||||||++|+|++|..||...+.......+.. ..+
T Consensus 162 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 162 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred CccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 999986644322 234567899999999998999999999999999999999999987654332211100 000
Q ss_pred ---------ccccc-----ccccccccc----ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 400 ---------FLADD-----CRLSLIMDP----QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 400 ---------~~~~~-----~~~~~~~~~----~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+.... ..+..+... ......+...+..+.+++.+||+.||.+|||+.|+|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 000000000 00001122346778999999999999999999999965
No 321
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-37 Score=309.24 Aligned_cols=252 Identities=18% Similarity=0.254 Sum_probs=207.8
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
.....|.+.+.||+|.|+.|..|+... +...+++|++.... .......+.+|+++|..++|||||+++++....
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~---t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~-- 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHIL---TGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE-- 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecC---CCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec--
Confidence 345788899999999999999998543 44555565544332 333445589999999999999999999998776
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
..+|+||||+.+|.+++++... ..+.+..+..++.|+.++++|||+++ |||||||++||||+.+.++||+|||+
T Consensus 128 ~~lylV~eya~~ge~~~yl~~~---gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgf 201 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVKH---GRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGF 201 (596)
T ss_pred ceeEEEEEeccCchhHHHHHhc---ccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeecccc
Confidence 8999999999999999999543 34566888999999999999999999 99999999999999999999999999
Q ss_pred CcccCCC-CccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHIPET-DISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~~~~-~~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
+.++... ...+.+|++.|.|||++.+..| ++.+|+||+|++||-|+.|..||++.+..+....+...
T Consensus 202 S~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g----------- 270 (596)
T KOG0586|consen 202 STFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG----------- 270 (596)
T ss_pred ceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee-----------
Confidence 9988654 3467799999999999998876 58999999999999999999999987655433222110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
+-.++.-.+.++.++|+++|..+|.+|+++.++++.-
T Consensus 271 -------k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 271 -------KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred -------eecccceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence 0122455667889999999999999999999998753
No 322
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.4e-36 Score=295.12 Aligned_cols=263 Identities=17% Similarity=0.217 Sum_probs=194.6
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
|+..+.||.|++|.||+|....+ +..+++++...... ......+.+|+++++.++|+||+++++++.+. +..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~--~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLT---GEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE--NKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCC---CCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC--CeEEE
Confidence 56678999999999999986543 34455555544332 22346788999999999999999999998765 88999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||++ ++|.+++.... ...+++..+..++.|++.||+|||+++ ++|+||+|+||+++.++.++|+|||++....
T Consensus 76 v~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~ 150 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFG 150 (283)
T ss_pred EEeccC-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence 999995 68999885432 246899999999999999999999998 9999999999999999999999999987553
Q ss_pred CC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhH-hhhcccccccc-------
Q 011995 336 ET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNL-VKWSRPFLADD------- 404 (473)
Q Consensus 336 ~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~-~~~~~~~~~~~------- 404 (473)
.. ......++..|+|||++.+. .++.++|||||||++|||++|.+||........... ..+........
T Consensus 151 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 151 VPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred CCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhc
Confidence 22 12333557889999988654 478899999999999999999999987654332211 11110000000
Q ss_pred c----ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 405 C----RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 405 ~----~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
. .......... .......+..+.+++.+||+.||.+|||+.++++
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 231 PDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 0000000000 0112234578899999999999999999999985
No 323
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-37 Score=299.16 Aligned_cols=266 Identities=20% Similarity=0.311 Sum_probs=194.9
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHh--CCCCCcccceeeeecCC--CCceEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS--LQHPNLCKLLGFHARDG--SDQRMLI 256 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~HpnIv~l~g~~~~~~--~~~~~lV 256 (473)
.+||+|.||.||+|.+.+.. +|||+.. .+..+.|.+|-+|.+. +.|+||++++++-.... .-.++||
T Consensus 216 eli~~Grfg~V~KaqL~~~~-----VAVKifp----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDNRL-----VAVKIFP----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred HHhhcCccceeehhhccCce-----eEEEecC----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 77999999999999987744 2344332 3456778888777765 48999999998654331 2489999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------CCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG------PFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~------~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
+||.+.|+|.++|.. ..++|....+|+..+++||+|||+.. +|+|+|||||..||||..|+++.|+|||+
T Consensus 287 t~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999954 46999999999999999999999654 46899999999999999999999999999
Q ss_pred CcccCCC----CccCcccccccCChhhhhcCC-CC-----CcCCchHHHHHHHHHHcCCCCCC-CCChHHHHhHhh--hc
Q 011995 331 AGHIPET----DISNSSVAAANLSVETLERGL-LT-----PKSNVWSFGIVLLELLTGRKNLD-SRHPKEERNLVK--WS 397 (473)
Q Consensus 331 a~~~~~~----~~~~~~~t~~y~aPE~~~~~~-~s-----~~sDvwSlGvvl~elltG~~p~~-~~~~~~~~~~~~--~~ 397 (473)
|..+... +....+||.+|||||++.+.. +. .+.||||+|.|||||+++..-+. +..+..+.-+-. -.
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 9877433 445578999999999997743 22 36899999999999999765543 211111110000 00
Q ss_pred ccccccccccccccccccCCCCCH-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 398 RPFLADDCRLSLIMDPQLKGRFPL-----KAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
.|.+.+ ....++....+..++. ....-+++.+..||..|++.|.|+.-+.+.+.++......
T Consensus 443 hPt~e~--mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 443 HPTLEE--MQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCCHHH--HHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 111111 1111112222222222 3456789999999999999999999999999988765544
No 324
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.4e-36 Score=298.41 Aligned_cols=262 Identities=21% Similarity=0.235 Sum_probs=190.5
Q ss_pred cceeec--CCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEG--LSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G--~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
..||+| +||+||++.. ...++.+++++..... .....+.+.+|+.+++.++||||+++++++... +..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARH---TPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--SWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEE---cCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--CceEEEE
Confidence 456666 9999999984 3344566676665543 233457788999999999999999999999875 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~ 337 (473)
||+.+++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++++||+.+......
T Consensus 79 e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~ 154 (328)
T cd08226 79 PFMAYGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRN 154 (328)
T ss_pred ecccCCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhcc
Confidence 9999999999886532 345899999999999999999999998 999999999999999999999999754322111
Q ss_pred C---------ccCcccccccCChhhhhcC--CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc--
Q 011995 338 D---------ISNSSVAAANLSVETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD-- 404 (473)
Q Consensus 338 ~---------~~~~~~t~~y~aPE~~~~~--~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~-- 404 (473)
. .....++..|++||++.+. .++.++|||||||++|||++|..||................++...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd08226 155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDIT 234 (328)
T ss_pred CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccc
Confidence 0 0111234679999999764 47899999999999999999999997654332211110000000000
Q ss_pred ----------------------cc-----cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 405 ----------------------CR-----LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 405 ----------------------~~-----~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.. ........+.......++..+.+|+.+||+.||++|||+.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00 000111111222234567889999999999999999999999854
No 325
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.7e-36 Score=287.13 Aligned_cols=251 Identities=20% Similarity=0.264 Sum_probs=202.2
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|++.+.||+|+||.||++....+ .+.++++...... .......+.+|+++++.++|+||+++++++... ...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSD---NQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG--NKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCC---CCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC--CEEE
Confidence 477789999999999999985443 3344455444322 233456788999999999999999999988765 7899
Q ss_pred EEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~ 152 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKV 152 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhh
Confidence 9999999999999885522 2356899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 334 IPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 334 ~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
..........++..|++||.+.+..++.++|+||||+++|||++|+.||...........+..
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----------------- 215 (256)
T cd08530 153 LKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR----------------- 215 (256)
T ss_pred hccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----------------
Confidence 765543445678899999999888899999999999999999999999987654332221110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
......+...+.++.+++.+||..+|++||++.++++.
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 216 GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00111234566889999999999999999999999863
No 326
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.2e-36 Score=295.33 Aligned_cols=268 Identities=17% Similarity=0.220 Sum_probs=194.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--- 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--- 249 (473)
.++|+..+.||+|+||.||+|.... ..+.++++...... .......+.+|+.++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKK---TKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPY 87 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECC---CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccc
Confidence 3578999999999999999998544 34555566554432 2222345678999999999999999999886542
Q ss_pred ---CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 250 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
....++||||+. ++|.+.+... ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~ 161 (310)
T cd07865 88 NRYKGSFYLVFEFCE-HDLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLA 161 (310)
T ss_pred cCCCceEEEEEcCCC-cCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEEC
Confidence 135699999995 5888887432 346899999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCC------ccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc
Q 011995 327 GYGCAGHIPETD------ISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 327 DFGla~~~~~~~------~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|||++....... .....++..|+|||.+.+.. ++.++||||||+++|||++|..||...........+.....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T cd07865 162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG 241 (310)
T ss_pred cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999987653321 12335678899999986654 78899999999999999999999987665444333322111
Q ss_pred ccccc-----cccccccccccCCC----C-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 400 FLADD-----CRLSLIMDPQLKGR----F-----PLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 400 ~~~~~-----~~~~~~~~~~l~~~----~-----~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..... ........-..... . +...+..+.+||.+||..||.+|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00000 00000000000000 0 1112456789999999999999999999985
No 327
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.2e-36 Score=291.95 Aligned_cols=245 Identities=19% Similarity=0.270 Sum_probs=189.9
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
||+|+||+||++....+ ++.+++++..... .......+.+|+++++.++||||+++++++... +..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKAT---GKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK--DDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCC---CcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC--CeEEEEEecC
Confidence 68999999999985443 3445555544321 222345667899999999999999999988765 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC-Cc
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET-DI 339 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~-~~ 339 (473)
++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 76 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 151 (277)
T cd05577 76 NGGDLKYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKI 151 (277)
T ss_pred CCCcHHHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCCcc
Confidence 9999999986542 246899999999999999999999999 999999999999999999999999998765432 22
Q ss_pred cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCC
Q 011995 340 SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRF 419 (473)
Q Consensus 340 ~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 419 (473)
....++..|++||.+.+..++.++|||||||++|+|++|+.||...........+... .. .....+
T Consensus 152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~------------~~~~~~ 217 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRR--TL------------EMAVEY 217 (277)
T ss_pred ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhc--cc------------cccccC
Confidence 3345678999999998888999999999999999999999999765431111111100 00 001112
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 011995 420 PLKAARTVADIALRCLQKEPSERP-----TMRSIFE 450 (473)
Q Consensus 420 ~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~ 450 (473)
+...+..+.+++.+||+.||.+|| ++.+++.
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 218 PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 334567899999999999999999 6666764
No 328
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6e-36 Score=285.30 Aligned_cols=251 Identities=21% Similarity=0.352 Sum_probs=201.3
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|...+.||+|++|.||+|....+ .+.+++++..... .......+.+|++++++++|+||+++++++........+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDT---GELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCC---CcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEE
Confidence 467779999999999999986542 3444455544332 234567889999999999999999999988765336789
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|+||+++++|.+++... ..+++..+..++.|++.+|+|||+.+ ++|+||+|+||+++.++.++|+|||.+...
T Consensus 78 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~ 151 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRL 151 (260)
T ss_pred EEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEec
Confidence 999999999999999543 27999999999999999999999998 999999999999999999999999998877
Q ss_pred CCCC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 335 PETD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 335 ~~~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
.... .....++..|++||.+.+..++.++||||||+++++|++|..||......... ... +
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~--------------~ 216 (260)
T cd06606 152 GDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA-LYK--------------I 216 (260)
T ss_pred ccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH-HHh--------------c
Confidence 5543 23456778999999998888999999999999999999999999876511111 000 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 411 MDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 411 ~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
........++...+..+.+++.+||..||.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 217 GSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0011112234455788999999999999999999999986
No 329
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.5e-36 Score=293.24 Aligned_cols=265 Identities=19% Similarity=0.248 Sum_probs=196.7
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
|++.+.||+|+||.||+|...++ .+.+++++..... .......+.+|+++++.++|+|++++++++........++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~---~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKT---GELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCC---CeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEE
Confidence 56678999999999999986553 3444555554432 2333467889999999999999999999987653468999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+++ +|.+++... ...+++..+..++.||+.||+|||+.+ ++|+||+|+||+++.++.+||+|||++....
T Consensus 78 v~e~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~ 151 (287)
T cd07840 78 VFEYMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYT 151 (287)
T ss_pred Eeccccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeecc
Confidence 9999975 898888543 246899999999999999999999999 9999999999999999999999999987664
Q ss_pred CCC---ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc--cccc
Q 011995 336 ETD---ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC--RLSL 409 (473)
Q Consensus 336 ~~~---~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 409 (473)
... .....++..|+|||.+.+ ..++.++||||||+++|||++|..||...........+........... ....
T Consensus 152 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 152 KRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred CCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccccc
Confidence 432 233456788999998765 4578999999999999999999999987665443322211100000000 0000
Q ss_pred -----------ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 410 -----------IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 410 -----------~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.....+...+...++..+.+++.+||..+|.+||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000001111113678899999999999999999999986
No 330
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.7e-36 Score=301.03 Aligned_cols=267 Identities=17% Similarity=0.230 Sum_probs=197.1
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
..++|+..+.||+|+||.||+|....+ ...++++..... ........+.+|+.++.++ +|+||+++++++.....
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~---~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRT---KEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCC---CeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence 456788889999999999999986533 233334433211 1233445678899999999 99999999999876544
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...++||||+. ++|..++... .+++..+..++.||+.||+|||+.+ |+|+||||+||+++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~ 153 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGL 153 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccc
Confidence 67899999996 5999888432 6889999999999999999999998 99999999999999999999999999
Q ss_pred CcccCCCC-------ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccc
Q 011995 331 AGHIPETD-------ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 331 a~~~~~~~-------~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
+....... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07852 154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPS 233 (337)
T ss_pred hhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 87654322 123356789999998755 4578999999999999999999999987655443332221111000
Q ss_pred cc-----------cccccccc---cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 403 DD-----------CRLSLIMD---PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 403 ~~-----------~~~~~~~~---~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.. ..+..+.. ..+. ......+.++.++|.+||+.||++|||+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 234 AEDIESIKSPFAATMLDSLPSRPRKPLD-ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHHhhhHHHhhhhcccccccchh-hhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00 00000000 0000 0112256789999999999999999999999975
No 331
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.3e-36 Score=292.88 Aligned_cols=266 Identities=17% Similarity=0.217 Sum_probs=193.6
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
++|+..+.||+|++|.||+|....+ .+.++++...... .......+.+|++++++++|+||+++++++... ...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVT---NETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE--KRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCC---CcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC--CeE
Confidence 5788889999999999999986443 3344455444332 223346788999999999999999999998765 789
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC-CCcEEEeccCCCc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK-DFSAKLSGYGCAG 332 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~-~~~vkl~DFGla~ 332 (473)
++||||++ ++|.+++... ....+++..+..++.||+.||+|||+++ ++|+||+|+||+++. ++.+||+|||++.
T Consensus 77 ~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~ 151 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLAR 151 (294)
T ss_pred EEEEeccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEccccccc
Confidence 99999995 5888877543 2334688899999999999999999998 999999999999985 5679999999987
Q ss_pred ccCCC--CccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh-h-hccccccc---c
Q 011995 333 HIPET--DISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV-K-WSRPFLAD---D 404 (473)
Q Consensus 333 ~~~~~--~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~-~-~~~~~~~~---~ 404 (473)
..... ......++..|++||++.+. .++.++|||||||++|+|+||.+||...........+ . +..+.... .
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 152 AFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGV 231 (294)
T ss_pred ccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccc
Confidence 55322 22334567899999998764 5789999999999999999999999876543332211 1 00000000 0
Q ss_pred ccccccc--ccccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 405 CRLSLIM--DPQLKG----RFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 405 ~~~~~~~--~~~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..+.... .+.... ......+.++.+++.+||+.||++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000 000000 012234677899999999999999999999986
No 332
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.7e-36 Score=295.67 Aligned_cols=251 Identities=21% Similarity=0.266 Sum_probs=194.6
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
|...+.||+|+||.||++....+ ...+++++..... .......+.+|+++++.++|+|++++++++..+ +..+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~---~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRT---NEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE--HTAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCC---CcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC--CeEE
Confidence 66668999999999999986543 2344455444321 223446788999999999999999999998776 7889
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+. |+|.+++.. ....+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++...
T Consensus 102 lv~e~~~-g~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~ 175 (317)
T cd06635 102 LVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIA 175 (317)
T ss_pred EEEeCCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCcccc
Confidence 9999996 588777743 2346899999999999999999999999 999999999999999999999999988654
Q ss_pred CCCCccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 335 PETDISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 335 ~~~~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
.. .....++..|+|||.+. .+.++.++|||||||++|||++|..||...........+....
T Consensus 176 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~------------- 240 (317)
T cd06635 176 SP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE------------- 240 (317)
T ss_pred CC--cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcc-------------
Confidence 33 23446778999999974 4568899999999999999999999997654333221111000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
.........+..+.+++.+||+.+|.+||++.++++.+..+.
T Consensus 241 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 241 ---SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ---CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 000012234567899999999999999999999998765433
No 333
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=7.5e-36 Score=289.74 Aligned_cols=244 Identities=18% Similarity=0.227 Sum_probs=185.3
Q ss_pred ceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHH---HHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDV---NTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 182 ~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei---~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
.||+|+||.||++...+ ..+.++++...... .......+..|. .+++...||||+.+++++... +..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEec---CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--CEEEEE
Confidence 48999999999998543 33445555544321 112222233443 344556899999999988765 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|||+.+|+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 76 ~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 76 LDLMNGGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSK 149 (278)
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCc
Confidence 999999999998843 346999999999999999999999998 99999999999999999999999999876654
Q ss_pred CCccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccccccc
Q 011995 337 TDISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQL 415 (473)
Q Consensus 337 ~~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 415 (473)
.......++..|+|||.+.++ .++.++|||||||++|||++|..||............. . .....
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~-~----------~~~~~--- 215 (278)
T cd05606 150 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-M----------TLTMA--- 215 (278)
T ss_pred cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH-H----------hhccC---
Confidence 444455788999999999754 58999999999999999999999997653222111110 0 00001
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 416 KGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 416 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
..++...+.++.+++.+||..+|.+|| ++.++++.
T Consensus 216 -~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 216 -VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred -CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 112334568899999999999999999 99999853
No 334
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.3e-36 Score=299.02 Aligned_cols=272 Identities=17% Similarity=0.242 Sum_probs=199.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC--
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS-- 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~-- 250 (473)
.++|...+.||+|+||+||+|.... +.+.+++|..... ........+.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSE---TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREA 80 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecC---CCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccc
Confidence 4578889999999999999998543 3445555544332 123345667889999999999999999998765321
Q ss_pred -CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 251 -DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 251 -~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
...|+||||+. ++|.+++.. ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCc
Confidence 35899999995 689888843 346999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCC--CccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc-cc------
Q 011995 330 CAGHIPET--DISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS-RP------ 399 (473)
Q Consensus 330 la~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~------ 399 (473)
++...... ......++..|+|||.+.. ..++.++|||||||++|+|++|++||.+.+.......+... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 154 LARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDL 233 (337)
T ss_pred cccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 99766433 1233456789999998865 46899999999999999999999999776433222211100 00
Q ss_pred -ccccccc------cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhh
Q 011995 400 -FLADDCR------LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE--LDRQE 456 (473)
Q Consensus 400 -~~~~~~~------~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~l~ 456 (473)
+...... .....++... .....++.++.+++.+||+.||++|||+.++++. |..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 0000000 0000000000 0112456788999999999999999999999987 65543
No 335
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=8.7e-36 Score=289.05 Aligned_cols=262 Identities=20% Similarity=0.244 Sum_probs=196.3
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
|...+.||.|++|.||+|....+ .+.++++...... .......+.+|++++++++|+||+++++++... +..++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLT---GEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK--GDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCC---CcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--CCEEE
Confidence 45668999999999999986433 3444455443322 223456788999999999999999999998765 88999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
|+||+.+ +|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||.+....
T Consensus 76 v~e~~~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~ 149 (283)
T cd05118 76 VFEFMDT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFG 149 (283)
T ss_pred EEeccCC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecC
Confidence 9999965 888888543 257899999999999999999999999 9999999999999999999999999987664
Q ss_pred CCC--ccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc--ccc------ccc-
Q 011995 336 ETD--ISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS--RPF------LAD- 403 (473)
Q Consensus 336 ~~~--~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~~------~~~- 403 (473)
... .....++..|++||.+.+. .++.++||||||+++|+|++|+.||...+..+....+... .+. ...
T Consensus 150 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05118 150 SPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSL 229 (283)
T ss_pred CCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhh
Confidence 432 2234567889999999776 6899999999999999999999999776654332221100 000 000
Q ss_pred ----ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 ----DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 ----~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
............ .......+.++.+||.+||+.||.+||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 230 ARNYKFSFPKKAGMPL-PKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhccccccCH-HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000000000 0112346788999999999999999999999986
No 336
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=7.5e-36 Score=291.95 Aligned_cols=242 Identities=20% Similarity=0.329 Sum_probs=192.4
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
..||+|+||.||++....+ ...+++++.... .......+.+|+.+++.++|+||+++++++... +..++||||+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~---~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~ 99 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSS---GKLVAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DELWVVMEFL 99 (292)
T ss_pred HHcCCCCCeEEEEEEEcCC---CeEEEEEEeccc-chhHHHHHHHHHHHHHhcCCcchhheeeEEEeC--CEEEEEEecC
Confidence 6799999999999986543 334445444322 233456789999999999999999999998776 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC--
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD-- 338 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~-- 338 (473)
++++|.+++.. ..+++..+..++.|++.+|+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 100 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~ 172 (292)
T cd06657 100 EGGALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 172 (292)
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccccc
Confidence 99999998732 35899999999999999999999999 9999999999999999999999999886553322
Q ss_pred ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCC
Q 011995 339 ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGR 418 (473)
Q Consensus 339 ~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 418 (473)
.....++..|++||.+.+..++.++|+|||||++|||++|..||...........+....+ +.+.
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~-------------~~~~-- 237 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-------------PKLK-- 237 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC-------------cccC--
Confidence 2234567899999999888899999999999999999999999986554433222211100 0000
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 419 FPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 419 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
....++..+.+++.+||+.||.+||++.++++
T Consensus 238 ~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 238 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 01234567889999999999999999999998
No 337
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.8e-36 Score=295.86 Aligned_cols=270 Identities=17% Similarity=0.227 Sum_probs=193.5
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
.|...+.||+|+||.||+|..... .....+++++..... .......+.+|+.++..++||||+++++++.+......
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~-~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNG-KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCC-CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceE
Confidence 367778999999999999996542 134455566554421 12334667899999999999999999999987655789
Q ss_pred EEEEEeccCCChhhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC----CCcEEEec
Q 011995 254 MLIYERLFHGSLDRLIYGRS--DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK----DFSAKLSG 327 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~----~~~vkl~D 327 (473)
++||||+.+ +|.+++.... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~D 155 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGD 155 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECC
Confidence 999999965 6766663221 2236899999999999999999999999 999999999999999 89999999
Q ss_pred cCCCcccCCCC-----ccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHH-------HHh--
Q 011995 328 YGCAGHIPETD-----ISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE-------ERN-- 392 (473)
Q Consensus 328 FGla~~~~~~~-----~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~-------~~~-- 392 (473)
||++....... .....++..|+|||.+.+. .++.++|||||||+++||++|++||....... ...
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 99987654321 1233567889999988764 47899999999999999999999997654322 000
Q ss_pred -Hhhh-ccc------ccccccccccccccccCCCCC---------H--HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 393 -LVKW-SRP------FLADDCRLSLIMDPQLKGRFP---------L--KAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 393 -~~~~-~~~------~~~~~~~~~~~~~~~l~~~~~---------~--~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
++.. ..+ ............+......++ . ..+.++.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 000 000000000000000000011 1 34567899999999999999999999985
No 338
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.1e-36 Score=298.70 Aligned_cols=268 Identities=16% Similarity=0.207 Sum_probs=197.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecC--CC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD--GS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~ 250 (473)
.++|+..+.||+|+||.||+|....+ +..+++++..... .......+.+|+.+|+.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRS---GKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADF 80 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCC---CCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCC
Confidence 36899999999999999999985443 3445555443322 233456788899999999999999999987643 23
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...++||||+. |+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 81 KDVYVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred ceEEEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccc
Confidence 57899999995 689988843 345899999999999999999999999 99999999999999999999999999
Q ss_pred CcccCCCCc------cCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc--cccc
Q 011995 331 AGHIPETDI------SNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS--RPFL 401 (473)
Q Consensus 331 a~~~~~~~~------~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~~~ 401 (473)
+........ ....++..|++||.+.+ ..++.++|||||||++|||++|+.||...........+... .+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~ 233 (334)
T cd07855 154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE 233 (334)
T ss_pred ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence 876533211 23367789999999865 45889999999999999999999999876544332211100 0000
Q ss_pred c--c---ccccccccc-cccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 A--D---DCRLSLIMD-PQLKGR-----FPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~--~---~~~~~~~~~-~~l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. . ...+....+ ...... +....+.++.+++.+||+.||.+||++.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0 0 000000000 000000 112356889999999999999999999998874
No 339
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.2e-36 Score=287.23 Aligned_cols=242 Identities=19% Similarity=0.253 Sum_probs=191.2
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
||.|+||.||++...++ ++.+++++..... .......+.+|++++++++|+||+++++.+... ...|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKST---GDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK--KNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCC---CCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC--cEEEEEEecC
Confidence 68999999999996543 3444555443321 124456789999999999999999999988765 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC---
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET--- 337 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~--- 337 (473)
++++|.+++... ..+++..+..++.||+.||+|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 76 ~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 149 (265)
T cd05579 76 PGGDLASLLENV---GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI 149 (265)
T ss_pred CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccc
Confidence 999999998543 26899999999999999999999999 999999999999999999999999998755332
Q ss_pred -------CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccc
Q 011995 338 -------DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLI 410 (473)
Q Consensus 338 -------~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (473)
......++..|++||.+....++.++||||||+++|||++|..||...........+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 217 (265)
T cd05579 150 NLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK------------ 217 (265)
T ss_pred ccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------------
Confidence 1223356788999999988889999999999999999999999998765443322221100
Q ss_pred cccccCCCCCHH--HHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 411 MDPQLKGRFPLK--AARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 411 ~~~~l~~~~~~~--~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
. .++.. .+..+.+++.+||+.+|.+|||+.++.+.|+
T Consensus 218 ----~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 218 ----I--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ----c--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0 01111 3678899999999999999999955555554
No 340
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.3e-35 Score=290.95 Aligned_cols=269 Identities=19% Similarity=0.204 Sum_probs=197.5
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC-
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG- 249 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~- 249 (473)
...++|++.+.||+|+||.||+|....+. +.+++++.+... .......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~---~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~ 80 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTG---ELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQD 80 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCC---cEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcch
Confidence 45678999999999999999999975433 344555554432 2233456788999999999999999999886542
Q ss_pred -------CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc
Q 011995 250 -------SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322 (473)
Q Consensus 250 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~ 322 (473)
...+++|+||+++ +|.+.+... ...+++..+..++.||+.||+|||+.+ |+|+||||+||+++.++.
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 81 ALDFKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred hhhccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCc
Confidence 2378999999976 777777432 346899999999999999999999999 999999999999999999
Q ss_pred EEEeccCCCcccCCCC---ccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc-
Q 011995 323 AKLSGYGCAGHIPETD---ISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS- 397 (473)
Q Consensus 323 vkl~DFGla~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~- 397 (473)
+||+|||++....... ......+..|++||.+.+. .++.++|||||||++|||++|++||...........+...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~ 234 (302)
T cd07864 155 IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLC 234 (302)
T ss_pred EEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 9999999987664332 1223457789999988654 4789999999999999999999999876544433222211
Q ss_pred -ccc------cccccccc-----cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 398 -RPF------LADDCRLS-----LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 398 -~~~------~~~~~~~~-----~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.+. +....... .......... ....+..+.+++.+||+.||.+||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 00000000 0000000000 1124678999999999999999999999985
No 341
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=306.71 Aligned_cols=276 Identities=18% Similarity=0.253 Sum_probs=209.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC----CC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG----SD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~----~~ 251 (473)
.|...+.||+|+||.||+|+ +..++..+|+|..+........+...+|+++|++++|+|||+++++-.+.. ..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgr---nketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGR---NKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred ceeehhhhcCCccceeeeec---ccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 45666899999999999998 666778888887776666667788999999999999999999998766554 46
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC--CCC--cEEEec
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID--KDF--SAKLSG 327 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~--~~~--~vkl~D 327 (473)
...+|||||.+|||...|.+-.+...|++.+.+.++.++..||.|||+++ ||||||||.||++- .+| ..||+|
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeec
Confidence 77899999999999999977656667999999999999999999999999 99999999999983 334 479999
Q ss_pred cCCCcccCCCC-ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccc
Q 011995 328 YGCAGHIPETD-ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDC 405 (473)
Q Consensus 328 FGla~~~~~~~-~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (473)
||.|+.+..+. ..+.+||..|++||.+.. ..|+..+|.|||||++|+++||..||..........-+.|....-...+
T Consensus 168 fG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 168 FGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred ccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 99999887654 466799999999999985 7899999999999999999999999965432211111112111111110
Q ss_pred cccccccccc------------CCCCCHHHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHHhhhcc
Q 011995 406 RLSLIMDPQL------------KGRFPLKAARTVADIALRCLQKEPSERP--TMRSIFEELDRQESR 458 (473)
Q Consensus 406 ~~~~~~~~~l------------~~~~~~~~~~~l~~li~~cl~~dP~~RP--t~~eil~~L~~l~~~ 458 (473)
. .....+.. ...........+-.++..+|..+|.+|- ...+....+..+...
T Consensus 248 v-~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 248 V-AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred e-eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 0 00011100 1111233445566778888888999998 777777777766543
No 342
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=311.06 Aligned_cols=254 Identities=22% Similarity=0.362 Sum_probs=214.7
Q ss_pred CcceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEE
Q 011995 180 DRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
.+.||.|+||+||+|.|-- +......+++|++..........++++|+.+|.+++|||+++|+|+|... .+.||++
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s---~~qlvtq 777 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS---TLQLVTQ 777 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc---hHHHHHH
Confidence 3899999999999998743 33344456777777666777789999999999999999999999999764 5889999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD 338 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~ 338 (473)
||+.|.|.|+++. +...+.....+.|..||++||.|||.+. +|||||...|||+..-..+||.|||+++......
T Consensus 778 ~mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred hcccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999965 4456888999999999999999999999 9999999999999999999999999999875442
Q ss_pred --ccCc--ccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhccccccccccccccccc
Q 011995 339 --ISNS--SVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDP 413 (473)
Q Consensus 339 --~~~~--~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (473)
+... ...+.|||-|.+....|+.++|||||||++||++| |..||.+....+..++.+ .+.++
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle-------~geRL------ 919 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE-------KGERL------ 919 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh-------ccccC------
Confidence 2222 33578999999999999999999999999999998 999999877666544332 22222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 414 QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 414 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
..|..++.++..++.+||..|+..||+++++..++.++...
T Consensus 920 ----sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 920 ----SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ----CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 23778899999999999999999999999999999987653
No 343
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.1e-36 Score=298.61 Aligned_cols=272 Identities=17% Similarity=0.223 Sum_probs=202.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---CC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---SD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~---~~ 251 (473)
+|.+.+.||.|+||.||+|+..+. ...+++++..... .....+.+.+|+.+++.++|+||+++++++.... ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 77 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRT---GRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFN 77 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCC---CcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccccc
Confidence 477889999999999999986443 3444454443322 2344577899999999999999999999987652 23
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..|+||||+. ++|.+++.. ...+++..+..++.|++.||.|||+.+ |+|+||||.|||++.++.++|+|||++
T Consensus 78 ~~~lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 78 DVYIVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred ceEEEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCce
Confidence 6899999997 589888843 237999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC-----ccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc-
Q 011995 332 GHIPETD-----ISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD- 404 (473)
Q Consensus 332 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~- 404 (473)
....... .....++..|+|||.+.+. .++.++|||||||++|+|++|.+||......+....+..........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred EeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 8764432 3344668899999999887 78999999999999999999999998776544333221110000000
Q ss_pred ------cccccccc---cccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhhc
Q 011995 405 ------CRLSLIMD---PQLK---GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE--LDRQES 457 (473)
Q Consensus 405 ------~~~~~~~~---~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~l~~ 457 (473)
........ .... .......+..+.+++.+||+.||.+||++.+++.. |+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 00000000 0000 00112356788999999999999999999999985 555443
No 344
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.9e-35 Score=282.01 Aligned_cols=251 Identities=21% Similarity=0.281 Sum_probs=201.3
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|...+.||+|+||.||++....+ ...+++++..... .......+.+|+++++.++|+|++++++.+... +..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~--~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSD---GKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK--GKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCC---CcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC--CEEE
Confidence 477789999999999999996542 3445555554432 234567789999999999999999999988766 7899
Q ss_pred EEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+|+||+++++|.+++.... ....+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~ 152 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKV 152 (258)
T ss_pred EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceee
Confidence 9999999999999986532 2467999999999999999999999998 99999999999999999999999999876
Q ss_pred cCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 334 IPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..... .....+++.|++||.+.+..++.++||||||+++++|++|..||.............. .
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~-------- 218 (258)
T cd08215 153 LSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK------G-------- 218 (258)
T ss_pred cccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc------C--------
Confidence 64432 2234567889999999888899999999999999999999999976653332211100 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....+...+..+.+++.+||..+|++|||+.++++.
T Consensus 219 ---~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 219 ---QYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ---CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0011233455788999999999999999999999863
No 345
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=9.2e-36 Score=293.04 Aligned_cols=267 Identities=18% Similarity=0.197 Sum_probs=193.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCC---
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--- 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~--- 249 (473)
.++|...+.||+|+||.||+|....+. ..+++++..... .......+.+|+++++.++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTG---RVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKS 83 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCC---cEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccc
Confidence 578999999999999999999865432 334455443332 2222356789999999999999999999876532
Q ss_pred ---CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 250 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
...+++|+||+.+ +|...+.. ....+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+
T Consensus 84 ~~~~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 84 KRKRGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred cccCceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEC
Confidence 1357999999965 77777643 2446999999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCCc-------------cCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh
Q 011995 327 GYGCAGHIPETDI-------------SNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN 392 (473)
Q Consensus 327 DFGla~~~~~~~~-------------~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~ 392 (473)
|||++........ ....++..|+|||.+.+. .++.++|||||||++|||++|.+||.+........
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~ 237 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH 237 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999876532211 122456789999988654 47899999999999999999999998766544333
Q ss_pred Hhhhc-ccccccc----ccccccc--------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 393 LVKWS-RPFLADD----CRLSLIM--------DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 393 ~~~~~-~~~~~~~----~~~~~~~--------~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.+... ....... ..+.... .+.+... .......+.+|+.+||+.||.+|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEER-FGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHH-cccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 22110 0000000 0000000 0000000 0123367889999999999999999999875
No 346
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.3e-35 Score=289.99 Aligned_cols=260 Identities=19% Similarity=0.245 Sum_probs=188.4
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEe
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~ 259 (473)
+.+|.|+++.||++.. ..+.+++++.... ........+.+|+++++.++|+||+++++++... +..+++|||
T Consensus 8 ~~~~~~~~v~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~--~~~~~~~e~ 80 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-----TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD--SELYVVSPL 80 (314)
T ss_pred HhhcCCceEEEEEecC-----CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC--CeEEEEEec
Confidence 4445555555555542 3455566665544 2445567899999999999999999999998766 789999999
Q ss_pred ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC-
Q 011995 260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD- 338 (473)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~- 338 (473)
+++|+|.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||.+.......
T Consensus 81 ~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~ 156 (314)
T cd08216 81 MAYGSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK 156 (314)
T ss_pred cCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccc
Confidence 99999999996532 345889999999999999999999999 9999999999999999999999999886543221
Q ss_pred --------ccCcccccccCChhhhhcC--CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHH-hHhhhccccccc----
Q 011995 339 --------ISNSSVAAANLSVETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER-NLVKWSRPFLAD---- 403 (473)
Q Consensus 339 --------~~~~~~t~~y~aPE~~~~~--~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~---- 403 (473)
.....++..|+|||++... .++.++|||||||++|||++|..||......... ..+.-..+....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 157 RQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred cccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCch
Confidence 1223456789999998663 4889999999999999999999999865433221 111100000000
Q ss_pred ---cccccc----cccc----ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 ---DCRLSL----IMDP----QLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ---~~~~~~----~~~~----~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...... ..++ ..........+.++.+|+.+||..||++|||+.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000 0000 01111234566789999999999999999999999874
No 347
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2e-35 Score=283.43 Aligned_cols=253 Identities=16% Similarity=0.217 Sum_probs=192.9
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|.+.+.||+|+||.||++.............++..... .......++.+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 78 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER--DAFC 78 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC--CceE
Confidence 477789999999999999986543221111111111111 1223345677899999999999999999998765 6789
Q ss_pred EEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+||||+++++|.+++... .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++. +.++|+|||++..
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~ 154 (260)
T cd08222 79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRL 154 (260)
T ss_pred EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceee
Confidence 999999999999988542 23457899999999999999999999999 999999999999975 5699999999876
Q ss_pred cCCCC--ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 334 IPETD--ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 334 ~~~~~--~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..... .....++..|++||.+.+..++.++|+||||+++|+|++|..||...........+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~---------------- 218 (260)
T cd08222 155 LMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV---------------- 218 (260)
T ss_pred cCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH----------------
Confidence 54322 223456789999999988888999999999999999999999997544322211110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. ......+...+.++.+++.+||..||++||++.++++.
T Consensus 219 ~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 219 E-GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred c-CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 0 00111244566789999999999999999999999863
No 348
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.2e-35 Score=297.03 Aligned_cols=278 Identities=18% Similarity=0.247 Sum_probs=199.8
Q ss_pred CHHHHHHH----hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCccc
Q 011995 166 PLDEVAAA----CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCK 240 (473)
Q Consensus 166 ~~~el~~~----~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~ 240 (473)
..+|+..+ .++|...+.||+|+||.||+|.... .+..+++++..... .......+.+|+.+++.++|+||++
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 78 (342)
T cd07879 2 YREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKR---TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIG 78 (342)
T ss_pred chhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCC---CCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccc
Confidence 34455544 3789999999999999999998543 23444555443321 2233456889999999999999999
Q ss_pred ceeeeecCCC----CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCcee
Q 011995 241 LLGFHARDGS----DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQ 316 (473)
Q Consensus 241 l~g~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NIL 316 (473)
+++++..... ..+++|+||+.. +|..++ +..+++..+..++.|++.||+|||+++ |+||||||+|||
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIl 149 (342)
T cd07879 79 LLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLA 149 (342)
T ss_pred hhheecccccCCCCceEEEEeccccc-CHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEE
Confidence 9998865421 356999999954 777665 235889999999999999999999999 999999999999
Q ss_pred eCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh
Q 011995 317 IDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 317 l~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~ 395 (473)
++.++.+||+|||++..... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.........+.
T Consensus 150 l~~~~~~kL~dfg~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~ 228 (342)
T cd07879 150 VNEDCELKILDFGLARHADA-EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 228 (342)
T ss_pred ECCCCCEEEeeCCCCcCCCC-CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999999999876532 2234466788999999876 458899999999999999999999998765433322221
Q ss_pred hccccccc-------ccccccccc--cc-cCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhh
Q 011995 396 WSRPFLAD-------DCRLSLIMD--PQ-LKGRF---PLKAARTVADIALRCLQKEPSERPTMRSIFEE--LDRQE 456 (473)
Q Consensus 396 ~~~~~~~~-------~~~~~~~~~--~~-l~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~l~ 456 (473)
........ ......... +. ....+ ....+..+.+|+.+||+.||.+||++.+++.. ++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 229 KVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 11000000 000000000 00 00000 11345678999999999999999999999955 66554
No 349
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=9.7e-36 Score=290.15 Aligned_cols=257 Identities=18% Similarity=0.237 Sum_probs=197.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC---CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
+|+..+.||+|+||.||+++...+....+.+++++.+... .......+.+|++++.++ +|+||+++++.+..+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~--~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD--T 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC--C
Confidence 4677899999999999999865444444555566544221 123346688999999999 699999999888665 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++|+|.+++.. ...+++..+..++.|++.+|.|||+.+ ++|+||+|.||+++.++.++|+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~ 152 (288)
T cd05583 79 KLHLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLS 152 (288)
T ss_pred EEEEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccc
Confidence 88999999999999999853 245899999999999999999999998 999999999999999999999999998
Q ss_pred cccCCCCc---cCcccccccCChhhhhcCC--CCCcCCchHHHHHHHHHHcCCCCCCCCChHHH-HhHhhhccccccccc
Q 011995 332 GHIPETDI---SNSSVAAANLSVETLERGL--LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE-RNLVKWSRPFLADDC 405 (473)
Q Consensus 332 ~~~~~~~~---~~~~~t~~y~aPE~~~~~~--~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~ 405 (473)
..+..... ....++..|++||.+.+.. .+.++||||||+++|||++|..||........ ..+... ....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~---~~~~-- 227 (288)
T cd05583 153 KEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRR---ILKS-- 227 (288)
T ss_pred cccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHH---HHcc--
Confidence 76543321 2235678999999987765 78899999999999999999999964322111 111100 0000
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQ 455 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l 455 (473)
. ...+...+..+.+++.+||+.||++|||+.++.+.|+..
T Consensus 228 ------~----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 228 ------K----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ------C----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 112334557889999999999999999998888777653
No 350
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.5e-35 Score=290.12 Aligned_cols=254 Identities=21% Similarity=0.346 Sum_probs=191.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~ 252 (473)
.++|...+.||.|+||.||+|...+. .+.++++.............+..|+.++.+.. |+||+++++++.++ ..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKT---GHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD--SD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCC---CeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC--Ce
Confidence 35678889999999999999997543 34445555543333344566778888777774 99999999999876 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-GPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.++||||+. ++|.+++... ...+++..+..++.|++.||+|||+. + |+||||+|+||+++.++.+||+|||++
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~ 162 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGIS 162 (296)
T ss_pred EEEEeeccC-cCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccc
Confidence 999999984 5777776442 33789999999999999999999974 6 999999999999999999999999998
Q ss_pred cccCCCC-ccCcccccccCChhhhhcCC----CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccc
Q 011995 332 GHIPETD-ISNSSVAAANLSVETLERGL----LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCR 406 (473)
Q Consensus 332 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~----~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (473)
..+.... .....++..|+|||.+.+.. ++.++||||||+++|||++|..||......... +.... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~----~~~-- 235 (296)
T cd06618 163 GRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEV-LTKIL----QEE-- 235 (296)
T ss_pred hhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHH-HHHHh----cCC--
Confidence 7654322 22335678899999987553 788999999999999999999999753322111 11100 000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 407 LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
.+... ....++.++.+|+.+||..||.+||++.++++.-
T Consensus 236 -----~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 236 -----PPSLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred -----CCCCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 00000 0113457789999999999999999999998763
No 351
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.7e-35 Score=287.36 Aligned_cols=264 Identities=19% Similarity=0.270 Sum_probs=192.5
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCceEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~~~l 255 (473)
|.+.+.||+|+||+||+|+..+.. +.++++...............+|+..+.+++ |+||+++++++..+ +..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~--~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETG---ELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN--DELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCC---cEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC--CcEEE
Confidence 566789999999999999975542 3333443322222223334567999999998 99999999998775 88999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+ +|+|.+++.... ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 76 v~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~ 150 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIR 150 (283)
T ss_pred EEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceecc
Confidence 99999 889998886532 356899999999999999999999999 9999999999999999999999999997664
Q ss_pred CCC-ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh-hhcccccccc----cccc
Q 011995 336 ETD-ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV-KWSRPFLADD----CRLS 408 (473)
Q Consensus 336 ~~~-~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~----~~~~ 408 (473)
... .....++..|+|||++.. ..++.++||||||++++||++|++||...........+ .+......+. ..+.
T Consensus 151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 151 SRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred CCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh
Confidence 432 233456789999998854 45789999999999999999999999766543322211 1100000000 0000
Q ss_pred cccccccC-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 409 LIMDPQLK-------GRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 409 ~~~~~~l~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...+..+. .......+.++.+|+.+||+.||++|||+.|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00000000 0001122577999999999999999999999975
No 352
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.9e-35 Score=291.17 Aligned_cols=251 Identities=22% Similarity=0.280 Sum_probs=193.6
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
|...+.||+|+||.||+|+...+. ..++++..... ........+.+|+++++.++|+|++++++++... ...+
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 91 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNS---EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--HTAW 91 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCC---cEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC--CeeE
Confidence 556688999999999999965432 33444444332 2333456788999999999999999999998775 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+. |+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.++|+|||++...
T Consensus 92 lv~e~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 165 (308)
T cd06634 92 LVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM 165 (308)
T ss_pred EEEEccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceee
Confidence 9999996 6888777432 345899999999999999999999998 999999999999999999999999998765
Q ss_pred CCCCccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 335 PETDISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 335 ~~~~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
... ....++..|+|||.+. ...++.++|||||||++|||++|..||...........+. .. .
T Consensus 166 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~--~~------~----- 230 (308)
T cd06634 166 APA--NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA--QN------E----- 230 (308)
T ss_pred cCc--ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHh--hc------C-----
Confidence 432 2345678999999985 3457889999999999999999999987654332221111 00 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
.+. ......+..+.+||.+||..+|.+||++.++++...-+.
T Consensus 231 ~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 231 SPA---LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred CCC---cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 000 012245677899999999999999999999997754333
No 353
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.7e-35 Score=296.40 Aligned_cols=275 Identities=14% Similarity=0.182 Sum_probs=201.1
Q ss_pred CCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccce
Q 011995 164 NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLL 242 (473)
Q Consensus 164 ~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~ 242 (473)
.....++..++++|...+.||+|+||.||+|.... .++.+++|+..... .....+.+.+|+.++.+++|+||++++
T Consensus 6 ~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~ 82 (345)
T cd07877 6 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 82 (345)
T ss_pred hhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcC---CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCccccee
Confidence 34556777889999999999999999999998543 33455555443221 223346688999999999999999999
Q ss_pred eeeecCC----CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC
Q 011995 243 GFHARDG----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID 318 (473)
Q Consensus 243 g~~~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~ 318 (473)
+++.... ....+++++++ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~ 154 (345)
T cd07877 83 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVN 154 (345)
T ss_pred eeeeecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEc
Confidence 9876431 13478888877 7899888743 35899999999999999999999999 99999999999999
Q ss_pred CCCcEEEeccCCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc
Q 011995 319 KDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397 (473)
Q Consensus 319 ~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 397 (473)
.++.+||+|||++..... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+...
T Consensus 155 ~~~~~kl~dfg~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (345)
T cd07877 155 EDCELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 233 (345)
T ss_pred CCCCEEEecccccccccc-cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999876532 2234466889999999866 46889999999999999999999999765543322211110
Q ss_pred cc--------cccccc--c----cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 398 RP--------FLADDC--R----LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 398 ~~--------~~~~~~--~----~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.. .+.... . +......... ......+.++.+||.+||+.||.+||++.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 234 VGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred hCCCCHHHHhhcccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00 000000 0 0000000000 0011245678999999999999999999998865
No 354
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=8.5e-36 Score=288.48 Aligned_cols=247 Identities=20% Similarity=0.283 Sum_probs=198.1
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSD 251 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~ 251 (473)
++|...+.||.|+||.||+|....+ +..+++++.... ........+.+|++++++++ |+||+++++++..+ +
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~--~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKET---NKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE--E 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCC---CCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC--c
Confidence 4788889999999999999986543 344555554432 12334567889999999998 99999999988765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+.+++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~ 149 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKY---GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTA 149 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccc
Confidence 899999999999999999543 36999999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCc----------------------cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH
Q 011995 332 GHIPETDI----------------------SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE 389 (473)
Q Consensus 332 ~~~~~~~~----------------------~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~ 389 (473)
........ ....++..|++||.+.+..++.++||||||+++++|++|+.||.......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 150 KVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred cccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 76543221 12345788999999988889999999999999999999999998765332
Q ss_pred HHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHH
Q 011995 390 ERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTM----RSIFE 450 (473)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~----~eil~ 450 (473)
....+. .....++...+..+.+|+.+||+.||.+||++ +++++
T Consensus 230 ~~~~~~------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 TFQKIL------------------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHH------------------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 221111 00112234446789999999999999999999 77764
No 355
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.4e-35 Score=291.18 Aligned_cols=246 Identities=22% Similarity=0.307 Sum_probs=191.2
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
|...+.||+|+||.||+|+...+ +..+++++..... .......+.+|+++++.++|+|++++++++.+. +..|
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~---~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHT---NEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE--HTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCC---CcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC--CEEE
Confidence 55567899999999999985433 3444555544321 233446788999999999999999999998876 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+. |+|.+++... ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.+||+|||++...
T Consensus 98 lv~e~~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 98 LVMEYCL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKS 171 (313)
T ss_pred EEEecCC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCccc
Confidence 9999995 5787777432 346899999999999999999999999 999999999999999999999999988654
Q ss_pred CCCCccCcccccccCChhhhh---cCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 335 PETDISNSSVAAANLSVETLE---RGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 335 ~~~~~~~~~~t~~y~aPE~~~---~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
.. .....++..|+|||++. ...++.++|||||||++|||++|..||...........+....
T Consensus 172 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~------------- 236 (313)
T cd06633 172 SP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND------------- 236 (313)
T ss_pred CC--CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-------------
Confidence 22 23456788999999984 4568899999999999999999999997765433322111100
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+.. .....+..+.+|+.+||+.+|.+||++.+++..
T Consensus 237 ~~~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 237 SPTL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 012334678999999999999999999999964
No 356
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.9e-35 Score=280.39 Aligned_cols=247 Identities=24% Similarity=0.383 Sum_probs=198.1
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
+|+..+.||+|++|.||++...... +.++++...... .......+.+|++++.+++|+|++++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETG---DFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS--DSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCC---cEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC--CEEE
Confidence 4777899999999999999865432 334444443332 224567899999999999999999999998765 7899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||+.+++|.+++... ..+++..+..++.|++.+|.|||+.+ |+|+||+|+||+++.++.++|+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 149 (254)
T cd06627 76 IILEYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKL 149 (254)
T ss_pred EEEecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceec
Confidence 999999999999998543 46899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccc
Q 011995 335 PETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMD 412 (473)
Q Consensus 335 ~~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (473)
..... ....++..|++||...+..++.++|||+||+++|+|++|..||............. .
T Consensus 150 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~------~---------- 213 (254)
T cd06627 150 NDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV------Q---------- 213 (254)
T ss_pred CCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh------c----------
Confidence 54332 23466789999999988888999999999999999999999997654322111110 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 413 PQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 413 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.....++...+..+.+++.+||..+|++||++.+++.
T Consensus 214 -~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 214 -DDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -cCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0011223455688999999999999999999999985
No 357
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.8e-35 Score=288.55 Aligned_cols=253 Identities=19% Similarity=0.263 Sum_probs=194.2
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC---CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
+|+..+.||.|+||.||++....+...+..+++++..... .....+.+.+|+.++.++ +|+||+.+++++..+ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~--~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD--T 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC--C
Confidence 4778899999999999999865433445556666554321 223346788999999999 699999999888765 6
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~ 152 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLS 152 (290)
T ss_pred eEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccc
Confidence 889999999999999998543 45889999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCc---cCcccccccCChhhhhcC--CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHH-hHhhhccccccccc
Q 011995 332 GHIPETDI---SNSSVAAANLSVETLERG--LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEER-NLVKWSRPFLADDC 405 (473)
Q Consensus 332 ~~~~~~~~---~~~~~t~~y~aPE~~~~~--~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~ 405 (473)
........ ....++..|++||.+.+. .++.++||||||+++|+|++|..||......... ..... ....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~---~~~~-- 227 (290)
T cd05613 153 KEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR---ILKS-- 227 (290)
T ss_pred eecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH---hhcc--
Confidence 76543221 234578899999998653 4678999999999999999999999643221111 11110 0000
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 011995 406 RLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP-----TMRSIFEE 451 (473)
Q Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 451 (473)
. ..++...+..+.+++.+||+.||++|| ++.+++..
T Consensus 228 ------~----~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 228 ------E----PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred ------C----CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0 112344567889999999999999997 67777654
No 358
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.4e-35 Score=284.32 Aligned_cols=246 Identities=20% Similarity=0.179 Sum_probs=186.2
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHH-HhCCCCCcccceeeeecCCCCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTL-ASLQHPNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l-~~l~HpnIv~l~g~~~~~~~~~~~lV~ 257 (473)
+.||.|+||.||+|..... ++.+++++..... .......+..|..++ ...+|+||+++++++... +..++|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRST---GDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK--DYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCC---CCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC--CeEEEEE
Confidence 5689999999999986443 3344555443221 112223445555544 445899999999998765 7899999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~ 337 (473)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 77 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~- 149 (260)
T cd05611 77 EYLNGGDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE- 149 (260)
T ss_pred eccCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-
Confidence 99999999999853 246899999999999999999999999 99999999999999999999999999876533
Q ss_pred CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCC
Q 011995 338 DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG 417 (473)
Q Consensus 338 ~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 417 (473)
.....++..|++||.+.+..++.++||||||+++|||++|..||...........+..... ....
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------~~~~ 214 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI--------------NWPE 214 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--------------CCCC
Confidence 2234567889999999888889999999999999999999999987654432222111000 0011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 418 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
.....++..+.+++.+||+.||++||++.++.+.|.
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 112245688999999999999999997765555443
No 359
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.6e-35 Score=284.56 Aligned_cols=265 Identities=17% Similarity=0.199 Sum_probs=194.3
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhC---CCCCcccceeeeecCCC--
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASL---QHPNLCKLLGFHARDGS-- 250 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l---~HpnIv~l~g~~~~~~~-- 250 (473)
|++.+.||+|+||.||+|.... ..+.+++++.+.... ......+.+|+.++.++ .|+||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLN---TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECC---CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC
Confidence 5667899999999999999754 234555665554332 22235567788877766 59999999999876521
Q ss_pred -CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 251 -DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 251 -~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
...+++|||+. ++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||
T Consensus 78 ~~~~~l~~e~~~-~~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 78 ELKLTLVFEHVD-QDLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred CceeEEEehhcc-cCHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccC
Confidence 23899999996 48988885432 346899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhh-cccccccc---
Q 011995 330 CAGHIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKW-SRPFLADD--- 404 (473)
Q Consensus 330 la~~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~~--- 404 (473)
++....... .....++..|+|||++.+..++.++|||||||++|||++|.+||......+....+.. ........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 153 LARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred cceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCC
Confidence 987764332 2333567889999999988899999999999999999999999987654433222110 00000000
Q ss_pred ------cccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 405 ------CRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 405 ------~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
........... .......+..+.+++.+||+.||.+||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 233 NVSLPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred Ccccchhhcccccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000000 1112245678899999999999999999999985
No 360
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-35 Score=297.23 Aligned_cols=264 Identities=19% Similarity=0.284 Sum_probs=192.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC----
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS---- 250 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~---- 250 (473)
.+|...+.||.|+||.||+|.... +.+.+++++..... ....+.+.+|+++++.++||||+++++++...+.
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~---~~~~v~iK~i~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSD---CDKRVAVKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECC---CCcEEEEEEEecCC-CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 678889999999999999998543 33444555444332 2445678899999999999999999987665422
Q ss_pred --------CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-CCC
Q 011995 251 --------DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID-KDF 321 (473)
Q Consensus 251 --------~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~ 321 (473)
...++||||+. ++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+||+++ .++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~ 152 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCc
Confidence 35789999996 589888732 35899999999999999999999999 99999999999997 456
Q ss_pred cEEEeccCCCcccCCCC-----ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh
Q 011995 322 SAKLSGYGCAGHIPETD-----ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~~-----~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~ 395 (473)
.+||+|||++....... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.............
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 78999999987653221 122356788999998754 457889999999999999999999998776544433322
Q ss_pred hcccccccccc--c----ccccc-cccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 396 WSRPFLADDCR--L----SLIMD-PQLKG-----RFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 396 ~~~~~~~~~~~--~----~~~~~-~~l~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...+....... . ..... ..... .+....+.++.+|+.+||+.||.+|||+.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 22111110000 0 00000 00000 011235578899999999999999999999985
No 361
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.7e-35 Score=284.17 Aligned_cols=252 Identities=18% Similarity=0.181 Sum_probs=190.7
Q ss_pred CHHHHHHHhcccccCcce--eecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccce
Q 011995 166 PLDEVAAACHNFFSDRCI--SEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLL 242 (473)
Q Consensus 166 ~~~el~~~~~~f~~~~~l--G~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~ 242 (473)
+..++....++|.+.+.+ |+|+||.||++....+ ...+++++...... .. .|+.....+ +|+||++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~---~~~~~~k~~~~~~~----~~--~e~~~~~~~~~h~~iv~~~ 75 (267)
T PHA03390 5 SLSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPT---QKLFVQKIIKAKNF----NA--IEPMVHQLMKDNPNFIKLY 75 (267)
T ss_pred HHHHHHHHHHhhccccceeecCCCceEEEEEEEcCC---CcEEEEEEEehhhc----ch--hhHHHHHHhhcCCCEEEEE
Confidence 345666677888887777 9999999999985443 34444444432111 11 122222222 799999999
Q ss_pred eeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-
Q 011995 243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF- 321 (473)
Q Consensus 243 g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~- 321 (473)
+++... +..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++
T Consensus 76 ~~~~~~--~~~~iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~ 147 (267)
T PHA03390 76 YSVTTL--KGHVLIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKD 147 (267)
T ss_pred EEEecC--CeeEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCC
Confidence 998876 7899999999999999999543 37999999999999999999999999 99999999999999988
Q ss_pred cEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc
Q 011995 322 SAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL 401 (473)
Q Consensus 322 ~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 401 (473)
.++|+|||++...... ....++..|+|||++.+..++.++|||||||++|||++|..||....... .....+....
T Consensus 148 ~~~l~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~- 223 (267)
T PHA03390 148 RIYLCDYGLCKIIGTP--SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLKRQ- 223 (267)
T ss_pred eEEEecCccceecCCC--ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHHhh-
Confidence 9999999998765432 23457889999999998889999999999999999999999997543221 1111111000
Q ss_pred ccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 011995 402 ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT-MRSIFE 450 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~eil~ 450 (473)
.. ........+..+.+|+.+||+.||.+||+ ++++++
T Consensus 224 ----------~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 ----------QK--KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ----------cc--cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 00123356788999999999999999996 688874
No 362
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=280.85 Aligned_cols=263 Identities=21% Similarity=0.279 Sum_probs=202.3
Q ss_pred CCCcCCCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCc
Q 011995 160 GTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNL 238 (473)
Q Consensus 160 ~~~~~~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnI 238 (473)
.....|+-+.|+.. ..||.|.||+|++-. ....++.+|||.++........++++.|.+...+- +.|||
T Consensus 56 ~~~~~F~~~~Lqdl-------g~iG~G~fG~V~KM~---hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~I 125 (361)
T KOG1006|consen 56 AHLHTFTSDNLQDL-------GEIGNGAFGTVNKML---HKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNI 125 (361)
T ss_pred ccccccccchHHHH-------HHhcCCcchhhhhhh---cCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHH
Confidence 34555777777665 889999999999997 45567788888888777777788899999876655 79999
Q ss_pred ccceeeeecCCCCceEEEEEeccCCChhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCcee
Q 011995 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR--SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQ 316 (473)
Q Consensus 239 v~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NIL 316 (473)
|++||.+..+ +..|+.||+|+ .||+.+...- .....+++..+-.|+...+.||.||...- .|||||+||+|||
T Consensus 126 VkfyGa~F~E--GdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNIL 200 (361)
T KOG1006|consen 126 VKFYGALFSE--GDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNIL 200 (361)
T ss_pred HHHhhhhhcC--CceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheE
Confidence 9999998876 66799999994 4776543210 12346889999999999999999998876 5999999999999
Q ss_pred eCCCCcEEEeccCCCcccCCC-CccCcccccccCChhhhhc--CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHH-HHh
Q 011995 317 IDKDFSAKLSGYGCAGHIPET-DISNSSVAAANLSVETLER--GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKE-ERN 392 (473)
Q Consensus 317 l~~~~~vkl~DFGla~~~~~~-~~~~~~~t~~y~aPE~~~~--~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~-~~~ 392 (473)
|+..|.+||||||++..+... ..+...|...|||||.+.. ..|+.+|||||||++|||+.||..||.+-+... +..
T Consensus 201 ldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~ 280 (361)
T KOG1006|consen 201 LDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLC 280 (361)
T ss_pred EecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHH
Confidence 999999999999998765433 2234467789999999943 348999999999999999999999998765422 111
Q ss_pred HhhhcccccccccccccccccccC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLK-GRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.+-...+ |.+. ..-..+.+..+..||..||.+|-..||.+.++++
T Consensus 281 ~Vv~gdp-------------p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 281 QVVIGDP-------------PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHcCCC-------------CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1111111 0111 0112457788999999999999999999998875
No 363
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2e-35 Score=294.51 Aligned_cols=264 Identities=18% Similarity=0.196 Sum_probs=190.9
Q ss_pred cccc-cCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh-------------hhHhHHHHHHHHHhCCCCCccc
Q 011995 175 HNFF-SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-------------GVKEFINDVNTLASLQHPNLCK 240 (473)
Q Consensus 175 ~~f~-~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~Ei~~l~~l~HpnIv~ 240 (473)
++|. ..+.||.|+||+||+|.... ..+.+++++........ ....+.+|+++++.++|+||++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 84 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTL---TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG 84 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECC---CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence 3454 34779999999999998543 23444555544322111 1125789999999999999999
Q ss_pred ceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 241 l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
+++++... +..++||||+. |+|.+++.. ...+++.....++.|++.||.|||+.+ |+|+||+|+||+++.+
T Consensus 85 ~~~~~~~~--~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~ 155 (335)
T PTZ00024 85 LVDVYVEG--DFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSK 155 (335)
T ss_pred eeEEEecC--CcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCC
Confidence 99998765 78999999996 699998843 345899999999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCC----------------CCccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCC
Q 011995 321 FSAKLSGYGCAGHIPE----------------TDISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLD 383 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~----------------~~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~ 383 (473)
+.++|+|||++..... .......++..|+|||.+.+. .++.++|||||||++|||++|.+||.
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 235 (335)
T PTZ00024 156 GICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP 235 (335)
T ss_pred CCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999876541 111223456789999998764 36899999999999999999999998
Q ss_pred CCChHHHHhHhh-hccccccccc----ccc--cccccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 384 SRHPKEERNLVK-WSRPFLADDC----RLS--LIMDPQLKG---RFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 384 ~~~~~~~~~~~~-~~~~~~~~~~----~~~--~~~~~~l~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.....+....+. .......... .+. ......... ......+.++.+++.+||+.||++||++.+++.
T Consensus 236 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 236 GENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 776544322221 1000000000 000 000000000 011234577899999999999999999999986
No 364
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.5e-35 Score=293.05 Aligned_cols=269 Identities=15% Similarity=0.220 Sum_probs=197.8
Q ss_pred HHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 170 VAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 170 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
+...+++|+..+.||.|+||.||+|.... ..+.+++|..... ......+.+.+|++++..++||||+++++++...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 81 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQL---TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP 81 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECC---CCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence 34567899999999999999999998543 3344445543322 2233456788999999999999999999988654
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
+ ...++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+|+||+|+|||++.++.++|+||
T Consensus 82 ~-~~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~df 152 (328)
T cd07856 82 L-EDIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDF 152 (328)
T ss_pred C-CcEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcc
Confidence 3 6789999998 5689888842 35788899999999999999999999 999999999999999999999999
Q ss_pred CCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh-hcccc------
Q 011995 329 GCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK-WSRPF------ 400 (473)
Q Consensus 329 Gla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~-~~~~~------ 400 (473)
|++...... .....++..|++||.+.+ ..++.++|||||||++|||++|..||...........+. +....
T Consensus 153 g~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 153 GLARIQDPQ-MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred ccccccCCC-cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 998755332 233456788999998866 568999999999999999999999997765432221111 00000
Q ss_pred -cccccccccccccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 401 -LADDCRLSLIMDPQLKGRFP-----LKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 401 -~~~~~~~~~~~~~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.........+..-......+ ..++..+.++|.+||+.+|++||++.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000000001111 1345789999999999999999999999876
No 365
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=306.95 Aligned_cols=258 Identities=20% Similarity=0.299 Sum_probs=212.3
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeec
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHAR 247 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~ 247 (473)
.+..-++.|++...||.|.+|.||+++..+ +....++|++.. .....+++..|..+|+.. .|||++.++|++.-
T Consensus 13 ~lpdp~d~~ei~evig~Gtygkv~k~k~~~---~~~~aa~kI~~~--~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 13 SLPDPADIFEIIEVIGNGTYGKVYKGRHVK---TGQLAAIKIMDP--TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred hCCCCCCccEEEEEEeeccceeEEEEeeee---cCceeeeEeecC--CccccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 333345678888999999999999998443 333444554443 344557788899999887 79999999999864
Q ss_pred ---CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEE
Q 011995 248 ---DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 248 ---~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
.+.+++|||||||.+||..|++.... +..+.|..+..|++.++.||.+||.+. ++|||||-.|||++.++.||
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEE
Confidence 23589999999999999999997654 788999999999999999999999998 99999999999999999999
Q ss_pred EeccCCCcccCCC--CccCcccccccCChhhhhcC-----CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc
Q 011995 325 LSGYGCAGHIPET--DISNSSVAAANLSVETLERG-----LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS 397 (473)
Q Consensus 325 l~DFGla~~~~~~--~~~~~~~t~~y~aPE~~~~~-----~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 397 (473)
|+|||++..+..+ ...+..||+.|||||++... .|+.++|+||||++..||.-|.+|+.+.++......+.
T Consensus 164 LvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip-- 241 (953)
T KOG0587|consen 164 LVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP-- 241 (953)
T ss_pred EeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC--
Confidence 9999999877554 44567899999999998543 37789999999999999999999999887765443221
Q ss_pred ccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 398 RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
-+|...-.-+...+.++-+||..||.+|..+||++.++|+
T Consensus 242 -------------RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 242 -------------RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred -------------CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 2333333347889999999999999999999999999875
No 366
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=312.90 Aligned_cols=261 Identities=25% Similarity=0.415 Sum_probs=208.4
Q ss_pred cccccCcceeecCCceEEEEEECCCCeee--eEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTS--KKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG 249 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~ 249 (473)
++..+.+.||+|.||.||+|.+....... ..+.++++.+. ......+.+..|+++|+.+ .|+||+.++|+|...
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~- 374 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD- 374 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC-
Confidence 34455579999999999999875433321 23445555544 3445678899999999999 699999999999874
Q ss_pred CCceEEEEEeccCCChhhhhhcCC-----CC--------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCcee
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRS-----DG--------PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQ 316 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~-----~~--------~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NIL 316 (473)
+.+++|+||+..|+|.++|+... .. ..++....+.++.||+.|++||++.. +|||||...|||
T Consensus 375 -~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVL 450 (609)
T KOG0200|consen 375 -GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVL 450 (609)
T ss_pred -CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEE
Confidence 78999999999999999997654 00 23888999999999999999999998 999999999999
Q ss_pred eCCCCcEEEeccCCCcccCCCCccCc---c--cccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHH
Q 011995 317 IDKDFSAKLSGYGCAGHIPETDISNS---S--VAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEE 390 (473)
Q Consensus 317 l~~~~~vkl~DFGla~~~~~~~~~~~---~--~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~ 390 (473)
+..+..+||+|||+++.......... . ....|||||.+....|+.++|||||||+|||++| |..||.+......
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 99999999999999997655443321 2 2456999999999999999999999999999998 8999987332221
Q ss_pred HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 391 RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
. .+ ++.++.++ ..|..+..++.+++..||+.+|++||++.++.+.|+.+.
T Consensus 531 l--~~----~l~~G~r~----------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 531 L--LE----FLKEGNRM----------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred H--HH----HHhcCCCC----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 1 11 22333222 237778899999999999999999999999999999854
No 367
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=280.13 Aligned_cols=270 Identities=23% Similarity=0.349 Sum_probs=221.3
Q ss_pred HHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEec--CCCChhhHhHHHHHHHHHhCCCCCcccceeee
Q 011995 168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRL--NPSSQGVKEFINDVNTLASLQHPNLCKLLGFH 245 (473)
Q Consensus 168 ~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~ 245 (473)
.||.....+++..-++-+|+||.||+|.|++...-.+..++-+|.. +.++-....++.|..++..+.|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 4555556678888899999999999998876543222222222222 23444556788999999999999999999999
Q ss_pred ecCCCCceEEEEEeccCCChhhhhh-----cCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC
Q 011995 246 ARDGSDQRMLIYERLFHGSLDRLIY-----GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD 320 (473)
Q Consensus 246 ~~~~~~~~~lV~E~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 320 (473)
.++. +..+.+|.++.-|+|..+|. .......++-.+...++.|++.|++|||.++ |||.||...|++||+.
T Consensus 357 ie~~-~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 357 IEDY-ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ 432 (563)
T ss_pred eecc-CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence 8765 78889999999999999997 2233456777888999999999999999999 9999999999999999
Q ss_pred CcEEEeccCCCcccCCCCcc----CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhh
Q 011995 321 FSAKLSGYGCAGHIPETDIS----NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVK 395 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~~~~~----~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 395 (473)
..+||+|-.+++.+...++. +......||++|.+....|+.++|||||||++|||+| |+.||...++.+...
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~--- 509 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEH--- 509 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHH---
Confidence 99999999999887655543 2234578999999999999999999999999999987 999999888877665
Q ss_pred hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 396 WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
++.++.++.. |.+++++++.++..||..+|++||++++++.-|.++...
T Consensus 510 ----ylkdGyRlaQ----------P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 510 ----YLKDGYRLAQ----------PFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred ----HHhccceecC----------CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 3445555443 778999999999999999999999999999999987643
No 368
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=7e-35 Score=282.54 Aligned_cols=262 Identities=18% Similarity=0.243 Sum_probs=195.5
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~l 255 (473)
|+..+.||+|+||.||+|+..++ ...+++++..... .......+..|+.+++.++|+||+++++++... +..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKT---GEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE--RKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCC---CcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--CceEE
Confidence 45568899999999999986543 3445555554432 233346788999999999999999999998765 78999
Q ss_pred EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 256 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
||||+. ++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++....
T Consensus 76 v~e~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~ 149 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFG 149 (282)
T ss_pred EecCcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccC
Confidence 999997 59999996432 46899999999999999999999999 9999999999999999999999999987664
Q ss_pred CCC--ccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh-hccc-------cccc-
Q 011995 336 ETD--ISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK-WSRP-------FLAD- 403 (473)
Q Consensus 336 ~~~--~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~-~~~~-------~~~~- 403 (473)
... ......+..|+|||.+.+. .++.++|||||||++|||++|.+||...........+. .... ....
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07829 150 IPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKL 229 (282)
T ss_pred CCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccc
Confidence 332 2333456789999998776 78999999999999999999999997765433222111 0000 0000
Q ss_pred ---ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 404 ---DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 404 ---~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...............+ ...+..+.+++.+||..||++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 230 PDYKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000000000111 123678999999999999999999999985
No 369
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.3e-36 Score=316.55 Aligned_cols=254 Identities=19% Similarity=0.287 Sum_probs=195.3
Q ss_pred HHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecC--
Q 011995 171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD-- 248 (473)
Q Consensus 171 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~-- 248 (473)
.+-.++|+....||+||||.||+++ +.-.+..+|+|.+.++.+......+.+|+.+|++|+|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVR---NKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVR---NKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEe---ecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 4556678888999999999999998 66677888888888887677778899999999999999999987543211
Q ss_pred ---------------------------------------------------------------------------C----
Q 011995 249 ---------------------------------------------------------------------------G---- 249 (473)
Q Consensus 249 ---------------------------------------------------------------------------~---- 249 (473)
+
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence 0
Q ss_pred ----------------------------C--------CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHH
Q 011995 250 ----------------------------S--------DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQG 293 (473)
Q Consensus 250 ----------------------------~--------~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 293 (473)
+ ..+||-||||+...|.+++..+.... ......+++.+|+.|
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEG 709 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHH
Confidence 0 13788899999988888885543111 357778999999999
Q ss_pred HHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC--------------------CCCccCcccccccCChhh
Q 011995 294 LTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP--------------------ETDISNSSVAAANLSVET 353 (473)
Q Consensus 294 L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~--------------------~~~~~~~~~t~~y~aPE~ 353 (473)
|.|+|++| ||||||||.||+|+++..|||+|||+|+... ..+.+..+||.-|+|||.
T Consensus 710 LaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 710 LAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 99999999 9999999999999999999999999998721 012345678999999999
Q ss_pred hhcCC---CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccC--CCCCHHHHHHHH
Q 011995 354 LERGL---LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLK--GRFPLKAARTVA 428 (473)
Q Consensus 354 ~~~~~---~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~l~ 428 (473)
+.+.. |+.|+|||||||||+||+. ||... ++....+.- +.+..+. ..|.......-+
T Consensus 787 l~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts--MERa~iL~~-------------LR~g~iP~~~~f~~~~~~~e~ 848 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS--MERASILTN-------------LRKGSIPEPADFFDPEHPEEA 848 (1351)
T ss_pred hcccccccccchhhhHHHHHHHHHHhc---cCCch--HHHHHHHHh-------------cccCCCCCCcccccccchHHH
Confidence 97655 9999999999999999986 45432 222222211 1111111 123333445567
Q ss_pred HHHHHhcccCCCCCCCHHHHHH
Q 011995 429 DIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 429 ~li~~cl~~dP~~RPt~~eil~ 450 (473)
.+|.++++.||++||||.|+|+
T Consensus 849 slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 849 SLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHhcCCCccCCCHHHHhh
Confidence 8999999999999999999986
No 370
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.8e-35 Score=292.85 Aligned_cols=266 Identities=15% Similarity=0.204 Sum_probs=195.6
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
...++|...+.||+|+||.||+|....+ +..+++|+..... .......+.+|+++|+.++|+||+++++++..+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRT---GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCC---CcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 3567899999999999999999985433 3445555443221 23334568899999999999999999998865421
Q ss_pred ----CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 251 ----DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 251 ----~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
...++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~ 160 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKIL 160 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEe
Confidence 2468999998 7799888742 35899999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCCccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh-hhccc-----
Q 011995 327 GYGCAGHIPETDISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV-KWSRP----- 399 (473)
Q Consensus 327 DFGla~~~~~~~~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~-~~~~~----- 399 (473)
|||++..... ......+++.|++||.+.+ ..++.++|||||||++|+|++|..||...........+ .....
T Consensus 161 dfg~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 161 DFGLARQTDS-EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEF 239 (343)
T ss_pred eccccccccc-CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 9999876533 2234466889999999876 35889999999999999999999999876543221111 10000
Q ss_pred ---ccccc-cc----cccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 400 ---FLADD-CR----LSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 400 ---~~~~~-~~----~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..... .. +.......+ ..+...++..+.+++.+||+.||.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 00 000000000 0111245567899999999999999999999983
No 371
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-37 Score=275.22 Aligned_cols=267 Identities=18% Similarity=0.239 Sum_probs=204.0
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh-hhHhHHHHHHHHHhCCCCCcccceeeeecC------
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARD------ 248 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~------ 248 (473)
.|+...+||+|.||.||+|+. ..++++++++++....... --...++|+++|..+.|+|++.++++|...
T Consensus 18 ~yek~~kigqGtfgeVFkAr~---~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARS---KNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhh---cCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 455558899999999999984 4455666665554433333 335678999999999999999999988542
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
....+||||++|++ +|..+|.. ....++..++.+++.++..||.|+|... |+|||+|+.|+||+.+|.+||+||
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecc
Confidence 12458999999977 89988843 2367899999999999999999999998 999999999999999999999999
Q ss_pred CCCcccC------CCCccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccc
Q 011995 329 GCAGHIP------ETDISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFL 401 (473)
Q Consensus 329 Gla~~~~------~~~~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 401 (473)
|+++.+. ...+++.++|.+|.+||.+.+.. |++..|||+-|||+.||+||.+.+.+........++......+
T Consensus 169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI 248 (376)
T ss_pred ccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence 9997653 23466778899999999998765 9999999999999999999999999888777776664221111
Q ss_pred c--------ccccccccc-ccccCCCC--------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 402 A--------DDCRLSLIM-DPQLKGRF--------PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 402 ~--------~~~~~~~~~-~~~l~~~~--------~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. .-.....+. .|-..+.+ +..-..+..+++..++..||.+|+++.+++..
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1 111111111 11111111 11223478899999999999999999998864
No 372
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=273.96 Aligned_cols=265 Identities=16% Similarity=0.291 Sum_probs=206.1
Q ss_pred CCHHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCccccee
Q 011995 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLG 243 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g 243 (473)
-.++|+-..|+ ..||+|+|+.|-.++ +..+++.++||++... ....+.++.+|++++.++ .|+||+.|++
T Consensus 73 g~F~d~YkLt~-----e~LGeGAyasVqtcv---~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLie 143 (463)
T KOG0607|consen 73 GKFEDMYKLTS-----ELLGEGAYASVQTCV---SIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIE 143 (463)
T ss_pred chHHHHHHhHH-----HHhcCccceeeeeee---eeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHH
Confidence 45677777765 789999999999997 6667788888876644 456678899999999999 6999999999
Q ss_pred eeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---
Q 011995 244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD--- 320 (473)
Q Consensus 244 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~--- 320 (473)
||+++ ..+|||||-|.||+|..+|+++ ..|++.++.+++.+|+.||.|||.+| |.||||||+|||-..-
T Consensus 144 fFEdd--~~FYLVfEKm~GGplLshI~~~---~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 144 FFEDD--TRFYLVFEKMRGGPLLSHIQKR---KHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKV 215 (463)
T ss_pred Hhccc--ceEEEEEecccCchHHHHHHHh---hhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCc
Confidence 99887 8899999999999999999654 35899999999999999999999999 9999999999998644
Q ss_pred CcEEEeccCCCcccCC---------CCccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcCCCCCCCCC
Q 011995 321 FSAKLSGYGCAGHIPE---------TDISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTGRKNLDSRH 386 (473)
Q Consensus 321 ~~vkl~DFGla~~~~~---------~~~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG~~p~~~~~ 386 (473)
--+|||||.+..-+.. .+..+.+|+..|||||+.. ...|+.+.|.||||||||-|++|.+||.+.-
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~C 295 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHC 295 (463)
T ss_pred CceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCcc
Confidence 3489999988754421 1234567788999999872 2358999999999999999999999997754
Q ss_pred hHHHHhHhhhccccccccc---cccccccccc--CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 387 PKEERNLVKWSRPFLADDC---RLSLIMDPQL--KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
..+ .-|.+......+ .+..+.+... ++.-...++.+..+++..+|..|+.+|.++.+++.
T Consensus 296 g~d----CGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 296 GAD----CGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCc----CCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 322 112221111111 1111111111 11123468899999999999999999999999987
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.9e-35 Score=293.44 Aligned_cols=267 Identities=15% Similarity=0.198 Sum_probs=196.4
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS 250 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~ 250 (473)
...++|...+.||+|+||.||+|....+ ...+++++.... ........+.+|+.+++.++|+||+++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKT---GRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASS 88 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCC---CcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc
Confidence 4567899999999999999999986543 334445543322 123344667889999999999999999987765421
Q ss_pred ----CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 251 ----DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 251 ----~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
...++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+
T Consensus 89 ~~~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~ 160 (343)
T cd07851 89 LEDFQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKIL 160 (343)
T ss_pred ccccccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEc
Confidence 2489999998 6799998843 46999999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCCccCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc-
Q 011995 327 GYGCAGHIPETDISNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD- 404 (473)
Q Consensus 327 DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~- 404 (473)
|||++...... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||...........+.-......+.
T Consensus 161 dfg~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 161 DFGLARHTDDE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEEL 239 (343)
T ss_pred ccccccccccc-ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Confidence 99998765432 3344667889999998653 57899999999999999999999998765443322111000000000
Q ss_pred ------cccccc---cccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 405 ------CRLSLI---MDPQLKGRF---PLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 405 ------~~~~~~---~~~~l~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...... ........+ ....+..+.+++.+||..||.+|||+.+|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000000 000000000 1124678999999999999999999999986
No 374
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=9.3e-35 Score=289.39 Aligned_cols=267 Identities=16% Similarity=0.188 Sum_probs=191.6
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhC-CCCCcccceeeeecC--CCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD--GSD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~--~~~ 251 (473)
+|...+.||+|+||.||++...... ..+.++++...... .....+.+.+|++++.++ +|+||+++++++... ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETS-EEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCC-cCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 4777899999999999999965431 13445555444321 223356788999999999 599999999875432 224
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+++++||+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred cEEEEEeccc-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 6788889885 689988843 346899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC------ccCcccccccCChhhhhc-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccc
Q 011995 332 GHIPETD------ISNSSVAAANLSVETLER-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADD 404 (473)
Q Consensus 332 ~~~~~~~------~~~~~~t~~y~aPE~~~~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 404 (473)
....... .....++..|+|||.+.+ ..++.++|||||||++|+|++|.+||...........+........ .
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~ 231 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPD-E 231 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCC-H
Confidence 7653221 123467889999998866 4589999999999999999999999987654332221111000000 0
Q ss_pred cccccccc-----------cccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 405 CRLSLIMD-----------PQLK---GRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 405 ~~~~~~~~-----------~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.....+.. .... .......+..+.+|+.+||+.||.+|||+.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000 0000 00111235789999999999999999999998753
No 375
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.7e-34 Score=274.83 Aligned_cols=236 Identities=22% Similarity=0.272 Sum_probs=189.4
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
||.|+||.||++...+. ...+++++..... .......+..|+++++.++|+||+++++.+..+ ...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDT---GKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE--EKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCC---CcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC--CeeEEEEecC
Confidence 68999999999986542 3445555544332 223456889999999999999999999988765 7899999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC--C
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET--D 338 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~--~ 338 (473)
++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 76 ~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~ 149 (250)
T cd05123 76 PGGELFSHLSKE---GRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR 149 (250)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCCCc
Confidence 999999999543 36899999999999999999999998 999999999999999999999999998776443 2
Q ss_pred ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCC
Q 011995 339 ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGR 418 (473)
Q Consensus 339 ~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 418 (473)
.....++..|++||...+..++.++|+||||+++|+|++|..||...........+... ...
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~------------------~~~ 211 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD------------------PLR 211 (250)
T ss_pred ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC------------------CCC
Confidence 33446678999999998888899999999999999999999999765542222111110 011
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 011995 419 FPLKAARTVADIALRCLQKEPSERPTMRS 447 (473)
Q Consensus 419 ~~~~~~~~l~~li~~cl~~dP~~RPt~~e 447 (473)
++...+..+.+++.+||..||++||++.+
T Consensus 212 ~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 212 FPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 23344678899999999999999999943
No 376
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-35 Score=280.14 Aligned_cols=259 Identities=19% Similarity=0.306 Sum_probs=196.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC--CCCCcccceeeeecCC--
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL--QHPNLCKLLGFHARDG-- 249 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l--~HpnIv~l~g~~~~~~-- 249 (473)
.......+.||+|.||.||+|.|++..++ ||+. +....+.+.+|.+|...+ +|+||+.+++.-..+.
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wrGe~VA-----VKiF----~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWRGEDVA-----VKIF----SSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hheeEEEEEecCccccceeeccccCCceE-----EEEe----cccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 34556668999999999999999987643 3332 234456788888887764 9999999987543322
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh-----hcCCCceeecCCCCCceeeCCCCcEE
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH-----EEGPFQAMYNEFSTANIQIDKDFSAK 324 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH-----~~~~~~ivHrDlkp~NILl~~~~~vk 324 (473)
-.++|||.+|.++|||+|+|.. .+++-...++++..+|.||+||| .+|+|.|.|||||..|||+..++.+-
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 2479999999999999999943 46999999999999999999999 46788999999999999999999999
Q ss_pred EeccCCCcccCCC------CccCcccccccCChhhhhcCC----C--CCcCCchHHHHHHHHHHcC----------CCCC
Q 011995 325 LSGYGCAGHIPET------DISNSSVAAANLSVETLERGL----L--TPKSNVWSFGIVLLELLTG----------RKNL 382 (473)
Q Consensus 325 l~DFGla~~~~~~------~~~~~~~t~~y~aPE~~~~~~----~--s~~sDvwSlGvvl~elltG----------~~p~ 382 (473)
|+|+|||....+. ..+..+||-.|||||++.... + -..+||||||+|+||+..+ ++||
T Consensus 357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 9999999765433 234568999999999985532 1 2368999999999999853 4566
Q ss_pred CCCChHH-----HHhHhhhcccccccccccccccccccCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 383 DSRHPKE-----ERNLVKWSRPFLADDCRLSLIMDPQLKGRF-PLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 383 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
.+..+.+ ++..+. ..-..|.+...+ ...+...+.++++.||..+|..|.|+-.|-+.|.++.
T Consensus 437 yd~Vp~DPs~eeMrkVVC------------v~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 437 YDVVPSDPSFEEMRKVVC------------VQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred ccCCCCCCCHHHHhccee------------ecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 5432211 111110 011122222222 3467788999999999999999999999999999887
Q ss_pred c
Q 011995 457 S 457 (473)
Q Consensus 457 ~ 457 (473)
+
T Consensus 505 ~ 505 (513)
T KOG2052|consen 505 N 505 (513)
T ss_pred c
Confidence 4
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.3e-34 Score=310.60 Aligned_cols=148 Identities=21% Similarity=0.252 Sum_probs=126.0
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~ 251 (473)
.++|.+.+.||+|+||.||+|.... ..+.+++|+.+... .......+.+|+.++..++|+||+++++++... +
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKN---NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA--N 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC--C
Confidence 3678899999999999999998653 33455666654322 233456788999999999999999999888765 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+||||||+.+++|.+++.. ...+++..++.|+.||+.||.|||..+ ||||||||+||||+.++.+||+|||++
T Consensus 78 ~~~lVmEy~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls 151 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLS 151 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCC
Confidence 89999999999999999854 235889999999999999999999998 999999999999999999999999987
Q ss_pred c
Q 011995 332 G 332 (473)
Q Consensus 332 ~ 332 (473)
+
T Consensus 152 ~ 152 (669)
T cd05610 152 K 152 (669)
T ss_pred c
Confidence 5
No 378
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=290.63 Aligned_cols=245 Identities=17% Similarity=0.252 Sum_probs=198.4
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEE
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
.+.||+|.||+||-|+.+. +++.+++|++... .......++++|+.||..++||.||.|.-.|++. +.+++|||
T Consensus 569 devLGSGQFG~VYgg~hRk---tGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~--ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRK---TGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP--ERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecc---cCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC--ceEEEEeh
Confidence 4789999999999998544 5566667765433 2344457899999999999999999998888776 88999999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---CcEEEeccCCCcccC
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---FSAKLSGYGCAGHIP 335 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~~vkl~DFGla~~~~ 335 (473)
-+ +|++.++|... +.++|++...+.++.||+.||.|||.++ |||+||||+|||+... -.+||||||+|+++.
T Consensus 644 Kl-~GDMLEMILSs-EkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg 718 (888)
T KOG4236|consen 644 KL-HGDMLEMILSS-EKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIG 718 (888)
T ss_pred hh-cchHHHHHHHh-hcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecc
Confidence 99 56777777554 4567999999999999999999999999 9999999999999643 579999999999998
Q ss_pred CCCcc-CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccc
Q 011995 336 ETDIS-NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQ 414 (473)
Q Consensus 336 ~~~~~-~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (473)
+.... ..+||+.|+|||+++...|...-||||.|||+|.-++|..||....+.. +.|+-+. ++.|.
T Consensus 719 EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQIQNAa-----------FMyPp 785 (888)
T KOG4236|consen 719 EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQIQNAA-----------FMYPP 785 (888)
T ss_pred hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh--HHhhccc-----------cccCC
Confidence 77654 5589999999999999999999999999999999999999997644322 2222111 11111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 415 LKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 415 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
- -..+++..+.+||..+|+..-.+|-|..+.+.
T Consensus 786 ~---PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 786 N---PWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred C---chhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 0 13577888999999999999999999887653
No 379
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=295.94 Aligned_cols=241 Identities=18% Similarity=0.241 Sum_probs=193.9
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~ 252 (473)
++.|.....+|.|+|+.|-++.. ..+...++++++... ..+-.+|+.++... +||||+++++.+.+. .+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~---~~t~~~~~vkii~~~-----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~--~~ 390 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCES---SPTDQEPAVKIISKR-----ADDNQDEIPISLLVRDHPNIVKSHDVYEDG--KE 390 (612)
T ss_pred chhhccccccCCCCccceeeeec---cccccchhheecccc-----ccccccccchhhhhcCCCcceeecceecCC--ce
Confidence 56788888899999999999984 444455556655432 23344677666666 799999999998765 88
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee-CCCCcEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI-DKDFSAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl-~~~~~vkl~DFGla 331 (473)
.|+|||++.++-|.+.+.... .+. ..+..|+.+|+.++.|||++| ||||||||+|||+ +..++++|+|||.+
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~---~~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a 463 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKP---EFC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFW 463 (612)
T ss_pred eeeeehhccccHHHHHHHhcc---hhH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechh
Confidence 999999999999888885433 222 778889999999999999999 9999999999999 68899999999999
Q ss_pred cccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 332 GHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 332 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
...... ..+.+.|..|.|||++....|++++||||||++||+|++|+.||.......+ +.
T Consensus 464 ~~~~~~-~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e--i~----------------- 523 (612)
T KOG0603|consen 464 SELERS-CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE--IH----------------- 523 (612)
T ss_pred hhCchh-hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH--HH-----------------
Confidence 877554 4556788999999999988999999999999999999999999976543311 11
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
..-..+.+...++..+++|+.+||+.||.+|++|.+++..
T Consensus 524 ~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 524 TRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 0111223347788999999999999999999999999764
No 380
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=311.12 Aligned_cols=254 Identities=16% Similarity=0.157 Sum_probs=201.3
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeee
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHA 246 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~ 246 (473)
++....++|.+.++||+|+||.|..+++. .+.+.+|.|+...- .......-|..|-++|...+.+.|+.++-.|.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k---~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHK---STEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEee---ccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 34444688999999999999999999854 45566666554321 12233456889999999999999999987777
Q ss_pred cCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEe
Q 011995 247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 326 (473)
Q Consensus 247 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~ 326 (473)
++ .++|||||||+||+|..++.. ...+++..+..++.+|+-||.-||+.| +|||||||+|||||..|++||+
T Consensus 146 D~--~~LYlVMdY~pGGDlltLlSk---~~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLA 217 (1317)
T KOG0612|consen 146 DE--RYLYLVMDYMPGGDLLTLLSK---FDRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLA 217 (1317)
T ss_pred Cc--cceEEEEecccCchHHHHHhh---cCCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeec
Confidence 66 899999999999999999943 237999999999999999999999999 9999999999999999999999
Q ss_pred ccCCCcccCCCC---ccCcccccccCChhhhh----c-CCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcc
Q 011995 327 GYGCAGHIPETD---ISNSSVAAANLSVETLE----R-GLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSR 398 (473)
Q Consensus 327 DFGla~~~~~~~---~~~~~~t~~y~aPE~~~----~-~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 398 (473)
|||.+-.+..+. ....+|||.|++||+++ + +.|+..+|+||+||++|||+.|..||......+....|.
T Consensus 218 DFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm--- 294 (1317)
T KOG0612|consen 218 DFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIM--- 294 (1317)
T ss_pred cchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHh---
Confidence 999776665332 24568999999999994 2 569999999999999999999999997665444433332
Q ss_pred cccccccccccccccccCCCCC--HHHHHHHHHHHHHhcccCCCCCCC---HHHHHH
Q 011995 399 PFLADDCRLSLIMDPQLKGRFP--LKAARTVADIALRCLQKEPSERPT---MRSIFE 450 (473)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~l~~li~~cl~~dP~~RPt---~~eil~ 450 (473)
+-.-.-.|| ..++.++.+||.+.+. +|+.|.. ++++-.
T Consensus 295 -------------~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 295 -------------NHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred -------------chhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 111111233 4588999999998874 6888887 777654
No 381
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=282.40 Aligned_cols=256 Identities=18% Similarity=0.253 Sum_probs=198.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC------ChhhHhHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS------SQGVKEFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
++|-..++||+|||+.||+|. +....+.+++++-.++.. ....+...+|..|.+.|.||.||++|+|+.-+
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAF---Dl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAF---DLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred HHHHHHHHhccccHHHHHHhc---ccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 446667899999999999998 555566677777766542 22345678899999999999999999999876
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC---CCcEEE
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---DFSAKL 325 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~vkl 325 (473)
. +.+|-|+|||+|.+|+-+|.. ...+++.++..|+.||+.||.||....+ +|||-||||.||||-. -|.+||
T Consensus 540 t-dsFCTVLEYceGNDLDFYLKQ---hklmSEKEARSIiMQiVnAL~YLNEikp-PIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 540 T-DSFCTVLEYCEGNDLDFYLKQ---HKLMSEKEARSIIMQIVNALKYLNEIKP-PIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred c-ccceeeeeecCCCchhHHHHh---hhhhhHHHHHHHHHHHHHHHHHHhccCC-CeeeeccCCccEEEecCcccceeEe
Confidence 4 789999999999999999843 4468999999999999999999999875 5999999999999943 488999
Q ss_pred eccCCCcccCCCCc---------cCcccccccCChhhhhcC----CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHh
Q 011995 326 SGYGCAGHIPETDI---------SNSSVAAANLSVETLERG----LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERN 392 (473)
Q Consensus 326 ~DFGla~~~~~~~~---------~~~~~t~~y~aPE~~~~~----~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~ 392 (473)
.||||++++....+ +...||.||++||.+.-+ ..+.++||||+|||+|..+.|+.||...... .+
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ--Qd 692 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ--QD 692 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--HH
Confidence 99999998865433 234678999999988433 4788999999999999999999999754322 22
Q ss_pred HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 393 LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
+.......... .+.-.--..++.++.+||++||++.-++|....++..
T Consensus 693 ILqeNTIlkAt----------EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 693 ILQENTILKAT----------EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred HHhhhchhcce----------eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 22221110000 0000112356788999999999999999998877654
No 382
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=276.71 Aligned_cols=241 Identities=19% Similarity=0.240 Sum_probs=195.7
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
.+|....+||+|+||.|.+|.-++ +...+++++.+... ....++--+.|-.+|... +-|.++.++.++.+- +
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkg---tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm--D 423 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKG---TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM--D 423 (683)
T ss_pred cccceEEEeccCccceeeeecccC---cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh--h
Confidence 467777999999999999996433 33445555443321 223334445677777766 578999999988876 8
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
.+|+||||+.||+|--++++ -+.+.+..+..+|.+|+-||-|||+++ ||+||||.+|||||.+|.+||+|||+.
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ---~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmc 497 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQ---VGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMC 497 (683)
T ss_pred heeeEEEEecCchhhhHHHH---hcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccc
Confidence 89999999999999888854 345788889999999999999999999 999999999999999999999999998
Q ss_pred ccc--CCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 332 GHI--PETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 332 ~~~--~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
+.- ......+.+||+.|+|||++....|+..+|+|||||+||||+.|++||++.++.+....|...
T Consensus 498 KEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh------------ 565 (683)
T KOG0696|consen 498 KENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH------------ 565 (683)
T ss_pred cccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc------------
Confidence 643 333445679999999999999999999999999999999999999999998877765544311
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT 444 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt 444 (473)
. -.||...+.++.+++...|.+.|.+|..
T Consensus 566 ----n--vsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 566 ----N--VSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ----c--CcCcccccHHHHHHHHHHhhcCCccccC
Confidence 1 1357888899999999999999999954
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=274.22 Aligned_cols=267 Identities=14% Similarity=0.173 Sum_probs=197.6
Q ss_pred HHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC--CC----Ccccceeee
Q 011995 172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ--HP----NLCKLLGFH 245 (473)
Q Consensus 172 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--Hp----nIv~l~g~~ 245 (473)
..+++|.+...+|+|+||.|-.+..+.. ...+++|++ +.-....+..+-|+++|.++. .| -+|.+.+|+
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~---~~~vAlKIi--k~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF 160 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRET---KEHVALKII--KNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF 160 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCC---CceehHHHH--HHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh
Confidence 3478999999999999999999985443 333334433 333344566678999999993 22 356777777
Q ss_pred ecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC------
Q 011995 246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK------ 319 (473)
Q Consensus 246 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~------ 319 (473)
... ++.|||+|.+ |-|+.++|..+ ...+++...+..++.|++++++|||+.+ ++|.||||+|||+..
T Consensus 161 dyr--ghiCivfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 161 DYR--GHICIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred hcc--CceEEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEE
Confidence 655 8899999998 66999999654 4567999999999999999999999999 999999999999831
Q ss_pred --------------CCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCC
Q 011995 320 --------------DFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSR 385 (473)
Q Consensus 320 --------------~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~ 385 (473)
+..++|+|||.|+.-.+.. +..+.|..|.|||++.+-.++..+||||+||||+||+||...|...
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc-ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC
Confidence 2348999999998664433 5667899999999999999999999999999999999999999887
Q ss_pred ChHHHHhHhhhccc--------------ccccc----------cccccccccccC----CCCCHHHHHHHHHHHHHhccc
Q 011995 386 HPKEERNLVKWSRP--------------FLADD----------CRLSLIMDPQLK----GRFPLKAARTVADIALRCLQK 437 (473)
Q Consensus 386 ~~~~~~~~~~~~~~--------------~~~~~----------~~~~~~~~~~l~----~~~~~~~~~~l~~li~~cl~~ 437 (473)
+..+.....+.... +...+ .......++... -........++.+|+.+||..
T Consensus 313 en~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 313 ENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred CcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 76553332221100 00000 000000000000 011234566799999999999
Q ss_pred CCCCCCCHHHHHHH
Q 011995 438 EPSERPTMRSIFEE 451 (473)
Q Consensus 438 dP~~RPt~~eil~~ 451 (473)
||.+|+|+.|+|+.
T Consensus 393 DP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 393 DPARRITLREALSH 406 (415)
T ss_pred CccccccHHHHhcC
Confidence 99999999999863
No 384
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=6.4e-34 Score=269.63 Aligned_cols=220 Identities=20% Similarity=0.206 Sum_probs=172.8
Q ss_pred cCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEeccCCCh
Q 011995 186 GLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL 265 (473)
Q Consensus 186 G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL 265 (473)
|.+|.||++.... +.+.+++|..+.. ..+.+|...+....||||+++++++... +..++||||+++|+|
T Consensus 4 g~~~~v~~~~~~~---~~~~~~~K~i~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDTR---TQQTFILKGLRKS------SEYSRERLTIIPHCVPNMVCLHKYIVSE--DSVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEcc---CCcEEEEEeecch------hhhhhHHHHHHhcCCCceeehhhheecC--CeEEEEEecCCCCCH
Confidence 8999999998543 4455556655432 1234555566666899999999998765 789999999999999
Q ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCccCcccc
Q 011995 266 DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDISNSSVA 345 (473)
Q Consensus 266 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t 345 (473)
.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++++|||++...... .....++
T Consensus 73 ~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-~~~~~~~ 145 (237)
T cd05576 73 WSHISKF---LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-CDGEAVE 145 (237)
T ss_pred HHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc-cccCCcC
Confidence 9998543 35899999999999999999999999 999999999999999999999999987655432 2334456
Q ss_pred cccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHH
Q 011995 346 AANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAAR 425 (473)
Q Consensus 346 ~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 425 (473)
..|+|||.+.+..++.++||||+||++|||++|..|+....... . . .....++...+.
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----~-------~----------~~~~~~~~~~~~ 203 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-----N-------T----------HTTLNIPEWVSE 203 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----c-------c----------ccccCCcccCCH
Confidence 78999999988889999999999999999999998875321100 0 0 000012344567
Q ss_pred HHHHHHHHhcccCCCCCCCH
Q 011995 426 TVADIALRCLQKEPSERPTM 445 (473)
Q Consensus 426 ~l~~li~~cl~~dP~~RPt~ 445 (473)
.+.+++.+||+.||++||++
T Consensus 204 ~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHHHccCCHHHhcCC
Confidence 89999999999999999997
No 385
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=280.68 Aligned_cols=243 Identities=16% Similarity=0.246 Sum_probs=202.4
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
.+++....||-||||.|-+........ .+++|+.+.. ......+.+..|-.||..++.|.||++|--|.++ ..
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~---~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~--ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKA---TFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS--KY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccch---HHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc--hh
Confidence 445555789999999999998765543 2333332221 2344567788999999999999999999877665 88
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
+|++||-|-||.|...|+. .+.|+..+...++.+++.|++|||+++ ||+|||||+|+||+.+|-+||.|||+|+
T Consensus 495 vYmLmEaClGGElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAK 568 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRD---RGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAK 568 (732)
T ss_pred hhhhHHhhcCchhhhhhhh---cCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHH
Confidence 9999999999999999954 457999999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCC-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 333 HIPETD-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 333 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
.+.... ..+++||+.|.|||++.+..-+.++|.|+||+++|||++|.+||.+.++....++|......
T Consensus 569 ki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~----------- 637 (732)
T KOG0614|consen 569 KIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK----------- 637 (732)
T ss_pred HhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh-----------
Confidence 886654 45679999999999999999999999999999999999999999999988877665422110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPT 444 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt 444 (473)
-.+|..+...+.++|.++...+|.+|.-
T Consensus 638 -----i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 -----IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred -----hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 1246667788899999999999999976
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.4e-32 Score=290.12 Aligned_cols=264 Identities=15% Similarity=0.159 Sum_probs=165.5
Q ss_pred HhcccccCcceeecCCceEEEEEECCCC-eeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeee----ec
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDA-STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFH----AR 247 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~----~~ 247 (473)
..++|...+.||+|+||.||+|++.++. .....+++|. ..... ..+.+..| .+....+.+++.++..+ ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~--~~~~~-~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKK--ATEYG-AVEIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEE--ecccc-hhHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 5678999999999999999999976541 1133344443 22111 11111111 12222233333322211 11
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCC-----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCC
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDG-----------------PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF 310 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 310 (473)
.....++|||||+.+++|.+++...... .......+..++.||+.||+|||+++ |+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcC
Confidence 2337899999999999999998543210 01123446689999999999999999 999999
Q ss_pred CCCceeeCC-CCcEEEeccCCCcccCCC---CccCcccccccCChhhhhcC----------------------CCCCcCC
Q 011995 311 STANIQIDK-DFSAKLSGYGCAGHIPET---DISNSSVAAANLSVETLERG----------------------LLTPKSN 364 (473)
Q Consensus 311 kp~NILl~~-~~~vkl~DFGla~~~~~~---~~~~~~~t~~y~aPE~~~~~----------------------~~s~~sD 364 (473)
||+|||++. ++.+||+|||+++.+... ......+++.|||||.+... .++.++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999986 589999999999765322 12345678999999976432 2345679
Q ss_pred chHHHHHHHHHHcCCCCCCCCChHHHHh-------HhhhcccccccccccccccccccCCCC--CHHHHHHHHHHHHHhc
Q 011995 365 VWSFGIVLLELLTGRKNLDSRHPKEERN-------LVKWSRPFLADDCRLSLIMDPQLKGRF--PLKAARTVADIALRCL 435 (473)
Q Consensus 365 vwSlGvvl~elltG~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~l~~li~~cl 435 (473)
||||||++|||+++..++.......... ...|...... ...+.+...+ .........+|+.+||
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEP-------RASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhcc-------ccchhhhhhhhhccccchHHHHHHHHHc
Confidence 9999999999999776654321111000 0111110000 0000000000 0112234568999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 011995 436 QKEPSERPTMRSIFEE 451 (473)
Q Consensus 436 ~~dP~~RPt~~eil~~ 451 (473)
+.||.+|||+.++|+.
T Consensus 435 ~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 435 RFKGRQRISAKAALAH 450 (566)
T ss_pred cCCcccCCCHHHHhCC
Confidence 9999999999999985
No 387
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=7e-32 Score=254.22 Aligned_cols=238 Identities=21% Similarity=0.273 Sum_probs=187.0
Q ss_pred CCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEeccCCChh
Q 011995 187 LSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266 (473)
Q Consensus 187 ~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~ 266 (473)
+||.||+|...++ ...+++++..........+.+.+|++.+++++|+||+++++++... ...++++||+.+++|.
T Consensus 1 ~~g~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKT---GKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE--DKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCC---CcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC--CEEEEEEeCCCCCCHH
Confidence 5899999997652 2344455544333222268899999999999999999999998775 7899999999999999
Q ss_pred hhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC-CccCcccc
Q 011995 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET-DISNSSVA 345 (473)
Q Consensus 267 ~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~-~~~~~~~t 345 (473)
+++... ..+++..+..++.+++.+|.|||+.+ ++|+||+|.||+++.++.++|+|||.+...... ......++
T Consensus 76 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 149 (244)
T smart00220 76 DLLKKR---GRLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGT 149 (244)
T ss_pred HHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCC
Confidence 998543 23899999999999999999999998 999999999999999999999999999876544 23445677
Q ss_pred cccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCC-CCHHHH
Q 011995 346 AANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGR-FPLKAA 424 (473)
Q Consensus 346 ~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~ 424 (473)
..|++||.+.+..++.++|||+||+++++|++|..||......... ..+.. .. ..... .....+
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~--~~~~~----~~---------~~~~~~~~~~~~ 214 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLEL--FKKIG----KP---------KPPFPPPEWKIS 214 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH--HHHHh----cc---------CCCCccccccCC
Confidence 8999999998888999999999999999999999999763222211 11100 00 00000 000155
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 425 RTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 425 ~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.++.+++.+||..+|++||++.++++
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhh
Confidence 78999999999999999999999986
No 388
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=261.45 Aligned_cols=268 Identities=16% Similarity=0.254 Sum_probs=199.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEec-CCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCC---C
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRL-NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS---D 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~---~ 251 (473)
+.+..+.||-|+||+||..+. ...++.++.+.... ...-...+.+.+|+++|.-++|.|++..+++..-..- .
T Consensus 54 Di~PDRPIGYGAFGVVWsVTD---PRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFq 130 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTD---PRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQ 130 (449)
T ss_pred cCCCCCcccccceeEEEeccC---CCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHH
Confidence 445569999999999999984 33444444433221 1233345789999999999999999999887654321 3
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
++|+|.|+| ..+|..+| .....++...++-+++||++||.|||+.+ |.||||||.|+|++.+..+||||||++
T Consensus 131 EiYV~TELm-QSDLHKII---VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 131 ELYVLTELM-QSDLHKII---VSPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred HHHHHHHHH-Hhhhhhee---ccCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccc
Confidence 578888988 45888888 34567899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC---ccCcccccccCChhhhhcCC-CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc--ccccc---
Q 011995 332 GHIPETD---ISNSSVAAANLSVETLERGL-LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS--RPFLA--- 402 (473)
Q Consensus 332 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~-~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~~~~--- 402 (473)
+.....+ ++..++|..|.|||.+.|.. |+.+.||||.|||+.||+.++..|....+.+..+++... .|..+
T Consensus 204 Rvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr 283 (449)
T KOG0664|consen 204 RTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMK 283 (449)
T ss_pred cccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHH
Confidence 8775443 34557899999999998765 999999999999999999999999888887776665311 11111
Q ss_pred ---cccccccccccccCCCC--------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 403 ---DDCRLSLIMDPQLKGRF--------PLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 403 ---~~~~~~~~~~~~l~~~~--------~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
++.+...+..+.-...+ +.....+...+...++..||.+|.+..+.+..+.
T Consensus 284 ~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 284 YACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 11111111111111111 2234456778889999999999999999887654
No 389
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=3.9e-33 Score=247.78 Aligned_cols=262 Identities=16% Similarity=0.203 Sum_probs=193.6
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCc
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~ 252 (473)
.++|++.+++|+|-++.||.|..-.+. .++.+++ ++ ....+.+.+|+.||..+. |||||+|+++..+..+..
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~---eK~ViKi--LK--PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNN---EKCVIKI--LK--PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCC---ceEEEee--ec--hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 478999999999999999999743322 2222332 22 234578999999999996 999999999998887788
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~DFGla 331 (473)
..||+||+++.+...+. +.|+...+..++.+++.||.|||++| |+|||+||.|++||.. ..++|+|||+|
T Consensus 110 paLiFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred chhHhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchH
Confidence 99999999998876654 35788889999999999999999999 9999999999999865 67999999999
Q ss_pred cccCCCCccCc-ccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCC-CCChHHHHhHhhh----------cc
Q 011995 332 GHIPETDISNS-SVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLD-SRHPKEERNLVKW----------SR 398 (473)
Q Consensus 332 ~~~~~~~~~~~-~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~-~~~~~~~~~~~~~----------~~ 398 (473)
.+.......+. +.+..|--||.+... .|+..-|+|||||+|..|+..+.||- +.+..++...+.. ..
T Consensus 181 EFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 181 EFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred hhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 98876654444 445666789998664 48999999999999999999888874 3333333222210 00
Q ss_pred cc-cccccccccccccccCCCC--------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 399 PF-LADDCRLSLIMDPQLKGRF--------PLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 399 ~~-~~~~~~~~~~~~~~l~~~~--------~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
.+ +.-+.....++....+..+ ..-.++++.+|+.++|..|..+|+|+.|.+..
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 00 0011111111111111111 12245889999999999999999999998863
No 390
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.1e-32 Score=278.39 Aligned_cols=264 Identities=11% Similarity=0.141 Sum_probs=179.4
Q ss_pred HhcccccCcceeecCCceEEEEEECCCC-------------eeeeEEEEEEEecCCCChhh--------------HhHHH
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDA-------------STSKKFEATVTRLNPSSQGV--------------KEFIN 225 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~--------------~~~~~ 225 (473)
..++|.+.++||+|+||+||+|.+.... ...+.+++|..... ..... +....
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~-~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMD-RQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEeccc-chhhHHHHHhhhhhhhcccchhHH
Confidence 3678999999999999999999752211 11123334433221 11111 23345
Q ss_pred HHHHHHhCCCCCc-----ccceeeeecC------CCCceEEEEEeccCCChhhhhhcCCC--------------------
Q 011995 226 DVNTLASLQHPNL-----CKLLGFHARD------GSDQRMLIYERLFHGSLDRLIYGRSD-------------------- 274 (473)
Q Consensus 226 Ei~~l~~l~HpnI-----v~l~g~~~~~------~~~~~~lV~E~~~~gsL~~~l~~~~~-------------------- 274 (473)
|+.++.+++|.++ +++++||... ..+..+|||||+.+++|.++++....
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 7777788876654 6777877542 12568999999999999999864211
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCc-c--CcccccccCC
Q 011995 275 -GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI-S--NSSVAAANLS 350 (473)
Q Consensus 275 -~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~-~--~~~~t~~y~a 350 (473)
...++|..+..++.|++.+|.|||+.+ |+||||||+|||++.++.+||+|||++........ . ...+++.|++
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 123567889999999999999999999 99999999999999999999999999876533211 1 1234789999
Q ss_pred hhhhhcCC--------------------C--CCcCCchHHHHHHHHHHcCCC-CCCCCChHHH------HhHhhhccccc
Q 011995 351 VETLERGL--------------------L--TPKSNVWSFGIVLLELLTGRK-NLDSRHPKEE------RNLVKWSRPFL 401 (473)
Q Consensus 351 PE~~~~~~--------------------~--s~~sDvwSlGvvl~elltG~~-p~~~~~~~~~------~~~~~~~~~~~ 401 (473)
||.+.... + ..+.||||+||++|+|++|.. ||........ .....|..
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--- 455 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--- 455 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh---
Confidence 99875432 1 124799999999999999875 6654321111 01111110
Q ss_pred ccccccccccccccCCCCCHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHH
Q 011995 402 ADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEP---SERPTMRSIFEE 451 (473)
Q Consensus 402 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP---~~RPt~~eil~~ 451 (473)
.......-......+....+|+.+||..+| .+|+|+.|+|++
T Consensus 456 --------~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 456 --------YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred --------hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000111111123456889999999999866 689999999864
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-33 Score=244.39 Aligned_cols=200 Identities=21% Similarity=0.278 Sum_probs=164.2
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceEEEEE
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
...||+|++|.|-+-++ ...+...++|.++.....+..++.++|+.+..+. .+|.+|.+||..... ...++.||
T Consensus 51 i~elGrGayG~vekmrh---~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re--gdvwIcME 125 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRH---IQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE--GDVWICME 125 (282)
T ss_pred hhhhcCCccchhhheee---ccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc--ccEEEeHH
Confidence 37899999999888774 3345555666555555677788899999987765 799999999988766 68999999
Q ss_pred eccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC
Q 011995 259 RLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET 337 (473)
Q Consensus 259 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~ 337 (473)
.|+. ||+.+..+. ..+..+++..+-+|+..+..||.|||++- .+||||+||+||||+.+|.+|+||||++..+.+.
T Consensus 126 ~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 9954 887665331 34678999999999999999999999987 6999999999999999999999999999877554
Q ss_pred CccC-cccccccCChhhhhcC----CCCCcCCchHHHHHHHHHHcCCCCCCCCCh
Q 011995 338 DISN-SSVAAANLSVETLERG----LLTPKSNVWSFGIVLLELLTGRKNLDSRHP 387 (473)
Q Consensus 338 ~~~~-~~~t~~y~aPE~~~~~----~~s~~sDvwSlGvvl~elltG~~p~~~~~~ 387 (473)
-..+ ..|.-.|||||.+..+ .|+.++||||||+.+.||.+++.||+....
T Consensus 203 iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 203 IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 3333 4566789999998543 589999999999999999999999986543
No 392
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3.9e-31 Score=257.52 Aligned_cols=268 Identities=18% Similarity=0.274 Sum_probs=194.2
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-----C---CCcccceeee
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-----H---PNLCKLLGFH 245 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----H---pnIv~l~g~~ 245 (473)
.++|.+.++||.|.|++||+|. +....+.+|+||.+ ......+..+.||++|++++ | .+||+|+++|
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLaw---Dtq~~r~VAlKVvK--SAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAW---DTQNKRYVALKVVK--SAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred CceEEEEEeccccccceeEEEe---eccCCeEEEEEEEe--hhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 3678899999999999999998 44444555566554 34455677889999999983 2 3799999998
Q ss_pred ecCC--CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---
Q 011995 246 ARDG--SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD--- 320 (473)
Q Consensus 246 ~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~--- 320 (473)
...| +.++|||+|++ |-+|..+|... ....++...++.|++||+.||.|||..+ .|||.||||+||||..+
T Consensus 152 khsGpNG~HVCMVfEvL-GdnLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~ 227 (590)
T KOG1290|consen 152 KHSGPNGQHVCMVFEVL-GDNLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEID 227 (590)
T ss_pred eecCCCCcEEEEEehhh-hhHHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccc
Confidence 7643 46899999999 66888888654 3455899999999999999999999998 79999999999997211
Q ss_pred --------C-----------------------------------------------------------------------
Q 011995 321 --------F----------------------------------------------------------------------- 321 (473)
Q Consensus 321 --------~----------------------------------------------------------------------- 321 (473)
+
T Consensus 228 ~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~ 307 (590)
T KOG1290|consen 228 PAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEP 307 (590)
T ss_pred hhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccccccccccccccc
Confidence 0
Q ss_pred --------------------------------------------------------------------------------
Q 011995 322 -------------------------------------------------------------------------------- 321 (473)
Q Consensus 322 -------------------------------------------------------------------------------- 321 (473)
T Consensus 308 ~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~ 387 (590)
T KOG1290|consen 308 RINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLP 387 (590)
T ss_pred CCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCC
Confidence
Q ss_pred ----cEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCCh----HHH--H
Q 011995 322 ----SAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHP----KEE--R 391 (473)
Q Consensus 322 ----~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~----~~~--~ 391 (473)
.+||+|||-|+.+.. .++....|..|.|||++.+..|+..+||||++|+++||+||...|+.... .++ .
T Consensus 388 ~~di~vKIaDlGNACW~~k-hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHi 466 (590)
T KOG1290|consen 388 ECDIRVKIADLGNACWVHK-HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHI 466 (590)
T ss_pred ccceeEEEeeccchhhhhh-hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHH
Confidence 023333333332211 12233446789999999999999999999999999999999999964321 111 1
Q ss_pred h-Hhh--------------hccccccccccccccccc---cc------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 011995 392 N-LVK--------------WSRPFLADDCRLSLIMDP---QL------KGRFPLKAARTVADIALRCLQKEPSERPTMRS 447 (473)
Q Consensus 392 ~-~~~--------------~~~~~~~~~~~~~~~~~~---~l------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 447 (473)
. +++ +.+-+......+..+-.- .+ ...|+.+...++.+|+.-||+.+|++||||.+
T Consensus 467 A~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~ 546 (590)
T KOG1290|consen 467 ALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQ 546 (590)
T ss_pred HHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHH
Confidence 1 111 223333333333322111 11 12467888999999999999999999999999
Q ss_pred HHHH
Q 011995 448 IFEE 451 (473)
Q Consensus 448 il~~ 451 (473)
+|+.
T Consensus 547 cl~h 550 (590)
T KOG1290|consen 547 CLKH 550 (590)
T ss_pred HhcC
Confidence 9853
No 393
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.8e-32 Score=273.25 Aligned_cols=240 Identities=18% Similarity=0.229 Sum_probs=183.1
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
|...+.||-|+||.|.+++--|. ...++.|..+..+ .......++.|-+||.....+.||+||-.|.+. +++|
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT---~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk--dnLY 705 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDT---RALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK--DNLY 705 (1034)
T ss_pred eEEEeeecccccceeEEEeecch---hhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC--CceE
Confidence 55667899999999999974433 3334444333221 233446678899999999999999998777665 8999
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||||++||++-.+|.+. +-|.+..+..++.++.+|+++.|..| +|||||||+|||||.+|.+||.||||++-+
T Consensus 706 FVMdYIPGGDmMSLLIrm---gIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRM---GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF 779 (1034)
T ss_pred EEEeccCCccHHHHHHHh---ccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccc
Confidence 999999999999988643 35888888889999999999999999 999999999999999999999999997533
Q ss_pred C---------CCC-----------------------------------ccCcccccccCChhhhhcCCCCCcCCchHHHH
Q 011995 335 P---------ETD-----------------------------------ISNSSVAAANLSVETLERGLLTPKSNVWSFGI 370 (473)
Q Consensus 335 ~---------~~~-----------------------------------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGv 370 (473)
. +++ ....+||+.|+|||++....|+..+|+||.||
T Consensus 780 RWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gv 859 (1034)
T KOG0608|consen 780 RWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGV 859 (1034)
T ss_pred eeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhH
Confidence 1 000 01336789999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCChHHHHh-HhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 011995 371 VLLELLTGRKNLDSRHPKEERN-LVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERP 443 (473)
Q Consensus 371 vl~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 443 (473)
|||||+.|++||....+.+... ++.|.. + +.-.+..+++.++.++|.++. -+++.|.
T Consensus 860 il~em~~g~~pf~~~tp~~tq~kv~nw~~-~--------------l~~~~~~~ls~e~~~li~kLc-~sad~RL 917 (1034)
T KOG0608|consen 860 ILYEMLVGQPPFLADTPGETQYKVINWRN-F--------------LHIPYQGNLSKEALDLIQKLC-CSADSRL 917 (1034)
T ss_pred HHHHHhhCCCCccCCCCCcceeeeeehhh-c--------------cccccccccCHHHHHHHHHHh-cChhhhh
Confidence 9999999999998766655433 233322 1 111224566777888876543 3556664
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-32 Score=278.96 Aligned_cols=242 Identities=19% Similarity=0.272 Sum_probs=181.6
Q ss_pred cccCcceeecCCce-EEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCceE
Q 011995 177 FFSDRCISEGLSSV-MYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 177 f~~~~~lG~G~~g~-Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~~ 254 (473)
|...+++|.|+.|+ ||+|.+.+.. |+||++-. ....-..+||..|+.- .|||||++|+ .+.+..++|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~-------VAVKrll~--e~~~~A~rEi~lL~eSD~H~NviRyyc--~E~d~qF~Y 579 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGRE-------VAVKRLLE--EFFDFAQREIQLLQESDEHPNVIRYYC--SEQDRQFLY 579 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCce-------ehHHHHhh--HhHHHHHHHHHHHHhccCCCceEEEEe--eccCCceEE
Confidence 44557789999986 9999987764 55555532 2234457999999988 7999999954 555558999
Q ss_pred EEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC---C--CcEEEecc
Q 011995 255 LIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK---D--FSAKLSGY 328 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~--~~vkl~DF 328 (473)
|+.|.|.. +|.+++... .+.....-.....++.|++.||++||+-+ ||||||||.||||+. + ..++|+||
T Consensus 580 IalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 580 IALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred EEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEeccc
Confidence 99999955 999999653 11111111445778899999999999988 999999999999965 3 57999999
Q ss_pred CCCcccCCCC-----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcC-CCCCCCCChHHHHhHhhhcccccc
Q 011995 329 GCAGHIPETD-----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTG-RKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 329 Gla~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
|+++.+..+. ..+..||-+|+|||.+....-+.++||||||||+|+.++| ..||.+....+.. ++ .
T Consensus 656 glsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N-Il-------~ 727 (903)
T KOG1027|consen 656 GLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN-IL-------T 727 (903)
T ss_pred ccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh-hh-------c
Confidence 9998875442 3456789999999999999889999999999999999886 8999865332221 11 1
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
....+..+.. ... .++.+||.+|+..||..||++.+||.
T Consensus 728 ~~~~L~~L~~-------~~d--~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 728 GNYTLVHLEP-------LPD--CEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred Cccceeeecc-------Cch--HHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1111111100 111 18899999999999999999999985
No 395
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=249.76 Aligned_cols=250 Identities=18% Similarity=0.283 Sum_probs=194.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC--CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.++|...++||+|+|+.|..+.+.. +...+++|+++.. ...+...-+..|-.+..+. +||.+|-|+.+|.++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~---t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte-- 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKK---TDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE-- 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcc---cceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc--
Confidence 4678888999999999999998544 4456666665433 3444556667787777776 799999999998877
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
..+++|.||++||+|--++.+ ...+++..+..+..+|..||.|||++| ||+||||.+|||||..|.+||.|||.
T Consensus 324 srlffvieyv~ggdlmfhmqr---qrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygm 397 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGM 397 (593)
T ss_pred ceEEEEEEEecCcceeeehhh---hhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccch
Confidence 789999999999999666643 346999999999999999999999999 99999999999999999999999998
Q ss_pred Cccc--CCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccc
Q 011995 331 AGHI--PETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLS 408 (473)
Q Consensus 331 a~~~--~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (473)
.+.- +....++.+||+.|+|||.+.+..|+..+|+|+|||+++||+.|+.||+.-...... ...++..+.
T Consensus 398 cke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d--------~ntedylfq 469 (593)
T KOG0695|consen 398 CKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPD--------MNTEDYLFQ 469 (593)
T ss_pred hhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcc--------cchhHHHHH
Confidence 8653 233456779999999999999999999999999999999999999999632110000 000111122
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 011995 409 LIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPT 444 (473)
Q Consensus 409 ~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt 444 (473)
.++..++ .+|...+-.+..+++.-|.+||.+|..
T Consensus 470 vilekqi--riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 470 VILEKQI--RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred HHhhhcc--cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 2222222 235566677788899999999999964
No 396
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=1.7e-31 Score=261.40 Aligned_cols=267 Identities=18% Similarity=0.220 Sum_probs=207.5
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC------CCCcccceeeeec
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ------HPNLCKLLGFHAR 247 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~------HpnIv~l~g~~~~ 247 (473)
-..|.+....|.|-|++|.+|.. ...+..+|+++++.+ +...+.=+.|++||.+|+ --|+++|+-.|..
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D---~~r~~~vAiKIIRnN--E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARD---QARGQEVAIKIIRNN--EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred cceeEEEeccccceeeeeeeccc---cCCCCeeEEEEeecc--hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 45688888899999999999984 333346666666643 344566678999999995 2378888877765
Q ss_pred CCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEe
Q 011995 248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLS 326 (473)
Q Consensus 248 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~ 326 (473)
. +++|||+|-+ ..+|.++|........|....+..++.|+.-||..|..-+ |+|.||||+|||+++. ..+|||
T Consensus 506 k--nHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLC 579 (752)
T KOG0670|consen 506 K--NHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLC 579 (752)
T ss_pred c--ceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeec
Confidence 5 8999999987 5599999977666667888999999999999999999998 9999999999999876 668999
Q ss_pred ccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhc---------
Q 011995 327 GYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWS--------- 397 (473)
Q Consensus 327 DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~--------- 397 (473)
|||.|..+..+..+...++.-|.|||++.|-.|+...|+||.||.||||+||+..|.+....++..+.+-.
T Consensus 580 DfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 580 DFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred cCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 99999999888888888899999999999999999999999999999999999999998776655443200
Q ss_pred ------cccccccccccc----------------cccc------ccCC--CC---CHHHHHHHHHHHHHhcccCCCCCCC
Q 011995 398 ------RPFLADDCRLSL----------------IMDP------QLKG--RF---PLKAARTVADIALRCLQKEPSERPT 444 (473)
Q Consensus 398 ------~~~~~~~~~~~~----------------~~~~------~l~~--~~---~~~~~~~l~~li~~cl~~dP~~RPt 444 (473)
..+...++.+.. .+.| .+.. .+ .......+.+|+..||..||++|.|
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 000111110000 0111 0000 11 2356678899999999999999999
Q ss_pred HHHHHHH
Q 011995 445 MRSIFEE 451 (473)
Q Consensus 445 ~~eil~~ 451 (473)
..+.|+.
T Consensus 740 ~nqAL~H 746 (752)
T KOG0670|consen 740 VNQALKH 746 (752)
T ss_pred HHHHhcC
Confidence 9998863
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=268.67 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=206.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
++|+....+|.|+||.||+++ +....+..+++++++... ....-+..|+-+++.++|+|||.++|-+... +.++
T Consensus 15 ddyellqrvgsgTygdvyKaR---d~~s~elaavkvVkLep~-dd~~~iqqei~~~~dc~h~nivay~gsylr~--dklw 88 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKAR---DKRSGELAAVKVVKLEPG-DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR--DKLW 88 (829)
T ss_pred cchhheeeecCCcccchhhhc---ccccCchhhheeeeccCC-ccccccccceeeeecCCCcChHHHHhhhhhh--cCcE
Confidence 567777999999999999998 566667777888777643 3456677899999999999999999988876 8899
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
++||||.+|+|.+..+ ..+++++.++..+.++.++||+|||+++ -+|||||-.|||++..|.+|++|||.+..+
T Consensus 89 icMEycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqi 162 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQI 162 (829)
T ss_pred EEEEecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhh
Confidence 9999999999999874 3457999999999999999999999999 899999999999999999999999998766
Q ss_pred CCC--CccCcccccccCChhhh---hcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 335 PET--DISNSSVAAANLSVETL---ERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 335 ~~~--~~~~~~~t~~y~aPE~~---~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
... ....+.||+.|||||+- ..+.|...+|||++|+...|+---++|....++.....+.... .
T Consensus 163 tati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS-----------~ 231 (829)
T KOG0576|consen 163 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS-----------G 231 (829)
T ss_pred hhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc-----------C
Confidence 433 33567899999999986 4567999999999999999999999987766655443322111 1
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
...+.+++ ....+..+.+|++.||.++|.+||+++.+|+
T Consensus 232 ~qpp~lkD--k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 232 FQPPTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCCcccC--CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11122222 4567788999999999999999999998775
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=6.2e-29 Score=228.20 Aligned_cols=211 Identities=27% Similarity=0.470 Sum_probs=177.2
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEeccC
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFH 262 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~ 262 (473)
||+|.+|.||++...+ ..+.+.+|+............+.+|++.++.+.|++|+++++++... ...++++||+.+
T Consensus 1 l~~g~~~~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKK---TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE--NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecC---CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC--CeEEEEEecCCC
Confidence 6899999999998654 23344455444332222457899999999999999999999998765 789999999999
Q ss_pred CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCC-CCcEEEeccCCCcccCCCC--c
Q 011995 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDK-DFSAKLSGYGCAGHIPETD--I 339 (473)
Q Consensus 263 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~-~~~vkl~DFGla~~~~~~~--~ 339 (473)
++|.+++.... ..+++..+..++.+++.+|.|||+.+ ++|+||+|.||+++. ++.++|+|||.+....... .
T Consensus 76 ~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~ 150 (215)
T cd00180 76 GSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLL 150 (215)
T ss_pred CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchh
Confidence 99999985431 46899999999999999999999999 999999999999999 8999999999987665442 3
Q ss_pred cCcccccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCC
Q 011995 340 SNSSVAAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGR 418 (473)
Q Consensus 340 ~~~~~t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 418 (473)
........|++||.+... .++.++|+|++|+++++|
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 445567899999999877 788999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 419 FPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 419 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
..+.+++..|+..||++||++.++++.|
T Consensus 188 ------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3467999999999999999999998753
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-30 Score=258.22 Aligned_cols=199 Identities=19% Similarity=0.215 Sum_probs=167.3
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC---CC----ChhhHhHHHHHHHHHhCC---CCCccccee
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PS----SQGVKEFINDVNTLASLQ---HPNLCKLLG 243 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~Ei~~l~~l~---HpnIv~l~g 243 (473)
..+|.....||+|+||.|+.|.++.+. ..+.+|.+... .. ....-.+-.||+||..++ |+||+++++
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~---~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLd 636 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENN---YEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLD 636 (772)
T ss_pred cccceeeeeccccccceEEEeeecccc---eEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhh
Confidence 346888899999999999999976653 22222222111 01 111234667999999997 999999999
Q ss_pred eeecCCCCceEEEEEec-cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc
Q 011995 244 FHARDGSDQRMLIYERL-FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS 322 (473)
Q Consensus 244 ~~~~~~~~~~~lV~E~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~ 322 (473)
||+++ +++||+||-. ++.+|+++|. -.+.+++..+..|+.||+.|+++||+.+ |||||||-+||.++.+|.
T Consensus 637 fFEdd--d~yyl~te~hg~gIDLFd~IE---~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~ 708 (772)
T KOG1152|consen 637 FFEDD--DYYYLETEVHGEGIDLFDFIE---FKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGF 708 (772)
T ss_pred eeecC--CeeEEEecCCCCCcchhhhhh---ccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCe
Confidence 99887 8999999975 4569999994 3457999999999999999999999999 999999999999999999
Q ss_pred EEEeccCCCcccCCCCccCcccccccCChhhhhcCCC-CCcCCchHHHHHHHHHHcCCCCCC
Q 011995 323 AKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLL-TPKSNVWSFGIVLLELLTGRKNLD 383 (473)
Q Consensus 323 vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~-s~~sDvwSlGvvl~elltG~~p~~ 383 (473)
+||+|||.+....+.....++||..|.|||++.|..| +..-|||++|++||-++..+.||.
T Consensus 709 ~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 709 VKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999999888888889999999999999999887 567999999999999999998885
No 400
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=3.3e-30 Score=239.72 Aligned_cols=264 Identities=16% Similarity=0.229 Sum_probs=191.5
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhCCCCCcccceeeeecCC----
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---- 249 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~---- 249 (473)
.+|...+.+|.|.- .|..+. +......++++..... ......++..+|..++..+.|+||++++.++.-..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~---D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAF---DQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeecccCCCCc-eEEecc---hhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence 45666688888888 555554 3333344334333222 23444577789999999999999999999886432
Q ss_pred CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 250 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
....|+||||| .++|...+.- .++-.++..|..|++.|+.|||+.+ |+||||||+||++..+..+||.|||
T Consensus 93 ~~e~y~v~e~m-~~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 93 FQEVYLVMELM-DANLCQVILM-----ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHhHHHHHHhh-hhHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccch
Confidence 24689999999 4599888852 3677899999999999999999999 9999999999999999999999999
Q ss_pred CCcccCCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhh-------------
Q 011995 330 CAGHIPET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVK------------- 395 (473)
Q Consensus 330 la~~~~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~------------- 395 (473)
+|+..... ..+..++|..|.|||++.+-.|...+||||+||++.||++|...|.+.+-.++...+.
T Consensus 164 ~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 164 LARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred hhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 99876555 4566688999999999998889999999999999999999999998765433222111
Q ss_pred ---hccccccccc-----ccc-cccccccCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 396 ---WSRPFLADDC-----RLS-LIMDPQLKG--RFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 396 ---~~~~~~~~~~-----~~~-~~~~~~l~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
-++.+..... ... .+.|..... ..+......+++++.+||..||++|.+++++|+.
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0000000000 000 000111110 0112334568899999999999999999999864
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=9.4e-28 Score=223.96 Aligned_cols=198 Identities=21% Similarity=0.303 Sum_probs=164.1
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
|...+.||.|++|.||++...++ .+.++++.............+.+|++.+..++|+|++++++++... ...+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGT---GELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP--EPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCC---CcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC--CceEEE
Confidence 45668899999999999987652 2344444444322222567889999999999999999999998765 789999
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
+||+++++|.+++.... ..+++..+..++.+++.+|.|||+.+ ++|+||++.||+++.++.++|+|||++.....
T Consensus 76 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~ 150 (225)
T smart00221 76 MEYCEGGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHR 150 (225)
T ss_pred EeccCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecC
Confidence 99999999999985432 12889999999999999999999998 99999999999999999999999999887654
Q ss_pred C---CccCcccccccCChhhh-hcCCCCCcCCchHHHHHHHHHHcCCCCCCC
Q 011995 337 T---DISNSSVAAANLSVETL-ERGLLTPKSNVWSFGIVLLELLTGRKNLDS 384 (473)
Q Consensus 337 ~---~~~~~~~t~~y~aPE~~-~~~~~s~~sDvwSlGvvl~elltG~~p~~~ 384 (473)
. ......++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 151 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 151 DLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 3 22334567889999998 666688899999999999999999999976
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=5.6e-28 Score=232.65 Aligned_cols=268 Identities=17% Similarity=0.232 Sum_probs=190.7
Q ss_pred HHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecC
Q 011995 170 VAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD 248 (473)
Q Consensus 170 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~ 248 (473)
+....+.|...++||+|+|++||++++.........++++.+... .....+.+|+++|..+ .+.||+++.+++..+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t---s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT---SSPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc---cCchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 334557788999999999999999986553223344445444433 2336688999999999 699999999988665
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEec
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLSG 327 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~D 327 (473)
+..++|+||+++....+++. .++...+..+++.++.||.++|..| ||||||||+|+|.+.. +.-.|+|
T Consensus 108 --d~v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 108 --DQVAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred --CeeEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEe
Confidence 89999999999999988873 2678999999999999999999999 9999999999999854 7788999
Q ss_pred cCCCccc-----------------CC--C---------------C------------ccCcccccccCChhhhhcC-CCC
Q 011995 328 YGCAGHI-----------------PE--T---------------D------------ISNSSVAAANLSVETLERG-LLT 360 (473)
Q Consensus 328 FGla~~~-----------------~~--~---------------~------------~~~~~~t~~y~aPE~~~~~-~~s 360 (473)
||+|... .. . . .....||++|.|||++... ..+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 9998611 00 0 0 0123578999999998654 478
Q ss_pred CcCCchHHHHHHHHHHcCCCCCCCCChH--HHHhHh-------------------hhcccc---cccc-cccccc-cccc
Q 011995 361 PKSNVWSFGIVLLELLTGRKNLDSRHPK--EERNLV-------------------KWSRPF---LADD-CRLSLI-MDPQ 414 (473)
Q Consensus 361 ~~sDvwSlGvvl~elltG~~p~~~~~~~--~~~~~~-------------------~~~~~~---~~~~-~~~~~~-~~~~ 414 (473)
.++||||.|||++.+++++.||-..... ...+++ .|.... +... .....+ ....
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~ 336 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESI 336 (418)
T ss_pred CccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhc
Confidence 9999999999999999999998543211 001111 011000 0000 000000 0000
Q ss_pred -------c-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 415 -------L-KGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 415 -------l-~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. ........+..+.+|+.+|+..||.+|.|+++.|+.
T Consensus 337 ~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 337 YKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0 011122334578899999999999999999998863
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.8e-28 Score=219.02 Aligned_cols=255 Identities=15% Similarity=0.244 Sum_probs=182.5
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
..+.|.+.+.||+|.||.+-++.++.... .++++.........++|.+|..---.| .|.||+.-|+..... .+
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t-----~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt-~d 95 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKT-----RIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT-SD 95 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCce-----EEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhc-Cc
Confidence 34678888999999999999998765433 244444555556678899998765555 689999888654433 37
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceee-C-CCCcEEEeccC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQI-D-KDFSAKLSGYG 329 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl-~-~~~~vkl~DFG 329 (473)
.+++++||++-|+|..-+.. ..+.+....+++.|+++||.|+|+++ +||||||.+|||| + +...+||||||
T Consensus 96 ~YvF~qE~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG 168 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFG 168 (378)
T ss_pred eEEEeeccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecc
Confidence 88999999999999887733 34788999999999999999999999 9999999999999 3 34589999999
Q ss_pred CCcccCCCCccCcccccccCChhhhhcC-----CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHH--HhHhhhcccccc
Q 011995 330 CAGHIPETDISNSSVAAANLSVETLERG-----LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEE--RNLVKWSRPFLA 402 (473)
Q Consensus 330 la~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~--~~~~~~~~~~~~ 402 (473)
+.+..... ......+..|-+||..... ...+.+|||.||++++.++||.+||.....+.. -....|...
T Consensus 169 ~t~k~g~t-V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~r--- 244 (378)
T KOG1345|consen 169 LTRKVGTT-VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKR--- 244 (378)
T ss_pred cccccCce-ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcc---
Confidence 87654221 1112235678899987432 257889999999999999999999974332221 112222211
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
..+.++..|. -.++.+..+.++-|..++++|--..++-+...
T Consensus 245 --------k~~~~P~~F~-~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 245 --------KNPALPKKFN-PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred --------cCccCchhhc-ccCHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 1122222221 23466778889999999999954444444433
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=5.1e-28 Score=267.16 Aligned_cols=195 Identities=19% Similarity=0.203 Sum_probs=140.5
Q ss_pred hCCC-CCcccceeeeecCC-----CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCce
Q 011995 232 SLQH-PNLCKLLGFHARDG-----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQA 305 (473)
Q Consensus 232 ~l~H-pnIv~l~g~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~i 305 (473)
.++| .||+.++++|.... .+.+++++||+ +++|.++|.. ....+++..++.++.||+.||+|||+++ |
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~g---I 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHSQG---I 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 4455 58888888772211 14677888987 6699999953 2356999999999999999999999999 9
Q ss_pred eecCCCCCceeeCC-------------------CCcEEEeccCCCcccCCC------------------CccCccccccc
Q 011995 306 MYNEFSTANIQIDK-------------------DFSAKLSGYGCAGHIPET------------------DISNSSVAAAN 348 (473)
Q Consensus 306 vHrDlkp~NILl~~-------------------~~~vkl~DFGla~~~~~~------------------~~~~~~~t~~y 348 (473)
|||||||+||||+. ++.+||+|||+++..... ......+|++|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 455667777776542110 00113468889
Q ss_pred CChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHH
Q 011995 349 LSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVA 428 (473)
Q Consensus 349 ~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 428 (473)
||||++.+..++.++|||||||+||||++|.+|+...... ...+... ...+. .........
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~--~~~~~~~------------~~~~~-----~~~~~~~~~ 242 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT--MSSLRHR------------VLPPQ-----ILLNWPKEA 242 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH--HHHHHHh------------hcChh-----hhhcCHHHH
Confidence 9999999999999999999999999999998887532111 0000000 00000 011123456
Q ss_pred HHHHHhcccCCCCCCCHHHHHHH
Q 011995 429 DIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 429 ~li~~cl~~dP~~RPt~~eil~~ 451 (473)
+++.+||++||.+||++.||++.
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhhc
Confidence 88999999999999999999863
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=8.4e-27 Score=210.27 Aligned_cols=170 Identities=21% Similarity=0.211 Sum_probs=129.1
Q ss_pred CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCccCc
Q 011995 263 GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDISNS 342 (473)
Q Consensus 263 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 342 (473)
|+|.+++..+ +..+++..+..|+.||+.||.|||+++ ||+|||++.++.+|+ ||++...... ..
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~---~~ 64 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE---QS 64 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc---cC
Confidence 6899999542 456999999999999999999999986 999999999999999 9998765432 23
Q ss_pred ccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHH
Q 011995 343 SVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLK 422 (473)
Q Consensus 343 ~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 422 (473)
.+++.|||||++.+..++.++|||||||++|||++|+.||.......... ..+....... .+.. ...+..
T Consensus 65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~-~~~~~~~~~~--------~~~~-~~~~~~ 134 (176)
T smart00750 65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAIL-EILLNGMPAD--------DPRD-RSNLES 134 (176)
T ss_pred CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHH-HHHHHHhccC--------Cccc-cccHHH
Confidence 67899999999999999999999999999999999999997543221110 0000000000 0000 011223
Q ss_pred HHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 011995 423 AAR--TVADIALRCLQKEPSERPTMRSIFEELDRQESR 458 (473)
Q Consensus 423 ~~~--~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~ 458 (473)
... ++.+++.+||..||.+||++.++++.+..+..+
T Consensus 135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 135 VSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 333 699999999999999999999999999876543
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=2.7e-24 Score=213.04 Aligned_cols=261 Identities=17% Similarity=0.164 Sum_probs=195.5
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCC----CCcccceeeeecCCCC
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH----PNLCKLLGFHARDGSD 251 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~H----pnIv~l~g~~~~~~~~ 251 (473)
+|.+.+.||+|+||.||.+...... .+.+++++.......... .+..|+.++..+.. .++..+++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~--~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEK--NKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGR-STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCC--CeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEecc-CCCc
Confidence 7999999999999999999855443 344555555543222222 78889999999873 57888887763 1226
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-----CcEEEe
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-----FSAKLS 326 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-----~~vkl~ 326 (473)
..|+||+.+ |.+|.++..... ...++..+.+.|+.|++.+|++||+.| +|||||||.|++++.. ..+.|.
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEE
Confidence 789999988 779999875443 578999999999999999999999999 9999999999999754 469999
Q ss_pred ccCCCc--ccCCCC----------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh
Q 011995 327 GYGCAG--HIPETD----------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394 (473)
Q Consensus 327 DFGla~--~~~~~~----------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~ 394 (473)
|||+++ .+.... .....||..|.++.+..+...+.+.|+||++.++.||+.|..||............
T Consensus 170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~ 249 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF 249 (322)
T ss_pred ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence 999998 321111 12345899999999999999999999999999999999999999765432221111
Q ss_pred h-hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 395 K-WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 395 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
. ...... ... +.......+.++...+-..+...+|....+...|+......
T Consensus 250 ~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 250 EKDPRKLL---------TDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHhhhhc---------ccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1 000000 000 12233466777777777799999999999999998876654
No 407
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-25 Score=205.14 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=194.5
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEec
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
.+|.+...|..|+|+|.++....+...+.- ......+.|..|.-.|+-+.||||+.++|.|... .++.++..||
T Consensus 196 tkl~e~hsgelwrgrwqgndivakil~vr~----~t~risrdfneefp~lrifshpnilpvlgacnsp--pnlv~isq~m 269 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGNDIVAKILNVRE----VTARISRDFNEEFPALRIFSHPNILPVLGACNSP--PNLVIISQYM 269 (448)
T ss_pred hhhccCCCcccccccccCcchhhhhhhhhh----cchhhcchhhhhCcceeeecCCchhhhhhhccCC--CCceEeeeec
Confidence 568889999999999998876544333221 1334456788999999999999999999999776 7889999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCcc
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIS 340 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 340 (473)
+.|||+..|+.. .+..++-.++.+++.+|++|++|||+..+. |----|....|+||++.+++|+ ++-+++.. ...
T Consensus 270 p~gslynvlhe~-t~vvvd~sqav~faldiargmaflhslep~-ipr~~lns~hvmidedltaris-mad~kfsf--qe~ 344 (448)
T KOG0195|consen 270 PFGSLYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLEPM-IPRFYLNSKHVMIDEDLTARIS-MADTKFSF--QEV 344 (448)
T ss_pred cchHHHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcchh-hhhhhcccceEEecchhhhhee-cccceeee--ecc
Confidence 999999999764 344567789999999999999999999842 3344788999999999988874 22122111 112
Q ss_pred CcccccccCChhhhhcCCC---CCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCC
Q 011995 341 NSSVAAANLSVETLERGLL---TPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKG 417 (473)
Q Consensus 341 ~~~~t~~y~aPE~~~~~~~---s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 417 (473)
.....+.||+||.++...- -.++|+|||++++|||.|.+.||.+..+.+..-.+. -..++.
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia----------------leglrv 408 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----------------LEGLRV 408 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh----------------hccccc
Confidence 3344689999999987653 357999999999999999999998877666443322 123444
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 418 RFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 418 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
.+|...+..+..++.-|+..||.+||.+..|+-.|+++.
T Consensus 409 ~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 409 HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 567888899999999999999999999999999998863
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-24 Score=202.26 Aligned_cols=261 Identities=14% Similarity=0.137 Sum_probs=196.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCCce
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~~~ 253 (473)
-+|.++++||+|.||+++.|+ +......+|+|....+ ....++..|....+.| ..++|...|-|-.+. -+-
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~---Nl~nne~VAIKfEPrk---S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG--~~N 99 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGK---NLYNNEPVAIKFEPRK---SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG--KYN 99 (449)
T ss_pred ccceeccccccCcceeeeccc---ccccCceEEEEecccc---CCcchHHHHHHHHHHHcCCCCCCceeeecccc--chh
Confidence 378999999999999999997 5555556666655433 3446788888888888 578888887444332 667
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-----CcEEEecc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-----FSAKLSGY 328 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-----~~vkl~DF 328 (473)
.||+|++ |-||+|++.- -+..|+..+++.+|.|++.-++|+|+++ +|+|||||+|+||..- ..+.|+||
T Consensus 100 iLVidLL-GPSLEDLFD~--CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDL--CGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred hhhhhhh-CcCHHHHHHH--hcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEec
Confidence 8999998 7799888743 3567999999999999999999999999 9999999999999643 35899999
Q ss_pred CCCcccCCC---------CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc
Q 011995 329 GCAGHIPET---------DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 329 Gla~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|+|+.+... ......||..||+-....+...+.+.|+-+||-|++++|.|..||.+.......+..+..
T Consensus 174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI-- 251 (449)
T KOG1165|consen 174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI-- 251 (449)
T ss_pred cchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh--
Confidence 999866332 234568999999999999999999999999999999999999999876433322221110
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQESRK 459 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~ 459 (473)
...........+..+.+.++...+...-..+-.+-|..+-+...+..+..+.
T Consensus 252 --------Ge~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 252 --------GETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred --------ccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 0000000011123455677777777777888899999988888887766544
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=4.1e-24 Score=212.06 Aligned_cols=178 Identities=13% Similarity=0.117 Sum_probs=129.1
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC----CCChhhHhHHHHHHHHHhCCCCCcccceee
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN----PSSQGVKEFINDVNTLASLQHPNLCKLLGF 244 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~ 244 (473)
.+....++|...+.||+|+||+||+|.+.... ...+++|++... ........|.+|+++|..++|+|++..+..
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~ 89 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDP--GTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA 89 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCC--CeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE
Confidence 33455678999999999999999999865321 122344443321 122345678999999999999999964322
Q ss_pred eecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCC-CCCceeeCCCCcE
Q 011995 245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF-STANIQIDKDFSA 323 (473)
Q Consensus 245 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl-kp~NILl~~~~~v 323 (473)
+ +..||||||+++++|.. +. ... ...++.+++.+|.|||+++ |+|||| ||+|||++.++.+
T Consensus 90 ~-----~~~~LVmE~~~G~~L~~-~~--~~~-------~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~i 151 (365)
T PRK09188 90 T-----GKDGLVRGWTEGVPLHL-AR--PHG-------DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEA 151 (365)
T ss_pred c-----CCcEEEEEccCCCCHHH-hC--ccc-------hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCE
Confidence 1 35799999999999963 21 111 1467889999999999999 999999 9999999999999
Q ss_pred EEeccCCCcccCCCC----------ccCcccccccCChhhhhcCC------CCCcCCch
Q 011995 324 KLSGYGCAGHIPETD----------ISNSSVAAANLSVETLERGL------LTPKSNVW 366 (473)
Q Consensus 324 kl~DFGla~~~~~~~----------~~~~~~t~~y~aPE~~~~~~------~s~~sDvw 366 (473)
||+|||+++.+.... ..+..+++.|++||++.... .+..+|-|
T Consensus 152 kLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 152 AVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred EEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 999999998664322 23445677899999885432 23446666
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=5.5e-24 Score=191.01 Aligned_cols=260 Identities=12% Similarity=0.058 Sum_probs=195.2
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCC-CCcccceeeeecCCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH-PNLCKLLGFHARDGSD 251 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~H-pnIv~l~g~~~~~~~~ 251 (473)
..++|...+.||.|+||.+|.|.. ...+..+|+|+... .....++..|..+...+++ ..|..+..|..+. +
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~---i~~ge~VAiK~Es~---~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~--~ 84 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGIS---ITSGEEVAIKLESS---KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEK--D 84 (341)
T ss_pred eccceEEEEeecCCchhheeeeee---ccCCceEEEEeecc---cCCCcchhHHHHHHHHhccCCCCchhhhhcccc--c
Confidence 357899999999999999999983 44456666776553 3345678889999999965 4555555555443 6
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC---CcEEEecc
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD---FSAKLSGY 328 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~~vkl~DF 328 (473)
.-.||||++ |.||++++.- -...++..+++-++-|++.-++|+|.++ +|||||||+|+|+.-+ ..+.++||
T Consensus 85 ynvlVMdLL-GPsLEdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDF 158 (341)
T KOG1163|consen 85 YNVLVMDLL-GPSLEDLFNF--CSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDF 158 (341)
T ss_pred cceeeeecc-CccHHHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEec
Confidence 778999998 7799998843 3456899999999999999999999999 9999999999999643 56899999
Q ss_pred CCCcccCC---------CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc
Q 011995 329 GCAGHIPE---------TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 329 Gla~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|+++.+.. ....+..||..|.+-....+-..+.+.|+-|+|.+|.++..|..||.+.......+..+..
T Consensus 159 GLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI-- 236 (341)
T KOG1163|consen 159 GLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKI-- 236 (341)
T ss_pred cchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHH--
Confidence 99976532 2234568899999999888888899999999999999999999999987654433322211
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
....-...........+.++...+..|-..--++-|...-+-+.+.-+.
T Consensus 237 --------~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 237 --------SEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred --------HHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 0000000111223445677888888998888888888877777666443
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.90 E-value=2.3e-22 Score=196.50 Aligned_cols=255 Identities=25% Similarity=0.372 Sum_probs=190.7
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh--hhHhHHHHHHHHHhCCCC-CcccceeeeecCCCCce
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHP-NLCKLLGFHARDGSDQR 253 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Ei~~l~~l~Hp-nIv~l~g~~~~~~~~~~ 253 (473)
|.....||.|+||.||++... +.+++++........ ....+.+|+.++..+.|+ +|+++++++... ...
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE--GSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC--CEE
Confidence 566688999999999999865 333344433332222 467899999999999988 799999988544 457
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC-cEEEeccCCCc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF-SAKLSGYGCAG 332 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-~vkl~DFGla~ 332 (473)
+++++|+.++++.+++........+.......++.|++.++.|+|..+ ++|||+||+||+++..+ .++++|||++.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~ 150 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAK 150 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcce
Confidence 999999999999977743211126889999999999999999999999 99999999999999988 79999999987
Q ss_pred ccCCCC--------ccCcccccccCChhhhhc---CCCCCcCCchHHHHHHHHHHcCCCCCCCCCh----HHHHhHhhhc
Q 011995 333 HIPETD--------ISNSSVAAANLSVETLER---GLLTPKSNVWSFGIVLLELLTGRKNLDSRHP----KEERNLVKWS 397 (473)
Q Consensus 333 ~~~~~~--------~~~~~~t~~y~aPE~~~~---~~~s~~sDvwSlGvvl~elltG~~p~~~~~~----~~~~~~~~~~ 397 (473)
...... .....++..|++||.+.+ ..++...|+|++|++++++++|..||..... ......+. .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~ 229 (384)
T COG0515 151 LLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL-E 229 (384)
T ss_pred ecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH-h
Confidence 554332 355678999999999987 5788999999999999999999999876553 11111111 0
Q ss_pred ccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 398 RPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 398 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
... . .................+.+++..|+..+|..|.++.+....
T Consensus 230 ~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 230 LPT-----P---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cCC-----c---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000 0 000000000012334678899999999999999998887764
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=3.2e-24 Score=226.24 Aligned_cols=255 Identities=18% Similarity=0.197 Sum_probs=181.9
Q ss_pred cCcceeecCCceEEEEEECCCCe--eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 179 SDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 179 ~~~~lG~G~~g~Vy~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
..+++|.|.+|.|+......... ..+.+.++.+...........+..|+.+-..++|+|++..+..+.+. ....-+
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~--~~~~~~ 399 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI--DGILQS 399 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc--ccchhh
Confidence 45789999999777776433222 11222211001111112223367788888899999999888776654 333444
Q ss_pred EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 257 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
||||+. +|..++... ..+....+-.++.|++.|+.|||+.| |.|||||++|+++..+|.+||+|||.+..+..
T Consensus 400 mE~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hhcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeecc
Confidence 999999 999998432 35888899999999999999999999 99999999999999999999999999876532
Q ss_pred C------CccCcccccccCChhhhhcCCCCC-cCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccc
Q 011995 337 T------DISNSSVAAANLSVETLERGLLTP-KSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSL 409 (473)
Q Consensus 337 ~------~~~~~~~t~~y~aPE~~~~~~~s~-~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (473)
. ......|+..|+|||++.+..|++ ..||||.|++++.|++|+.||......+...... .......
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~------~~~~~~~- 545 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN------NYSDQRN- 545 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh------ccccccc-
Confidence 2 234567889999999999999986 4899999999999999999997654332211000 0000000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 410 IMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 410 ~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
...-........+...+.+|.++|+.||.+|.|+++|++.
T Consensus 546 --~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 546 --IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred --cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 0000011233556778899999999999999999999863
No 413
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=2.3e-22 Score=203.28 Aligned_cols=229 Identities=17% Similarity=0.200 Sum_probs=182.6
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh-hhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCceEEEEEec
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-GVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+|.|.||.|+.+.--.+..+.+.++.++........ .......|..++..++ ||.+|+++..+..+ ...+++++|.
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~--~kl~l~ld~~ 79 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTD--GKLYLILDFL 79 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccc--cchhHhhhhc
Confidence 789999999987644455555666666544332111 1124556888888886 99999998877766 7889999999
Q ss_pred cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCcc
Q 011995 261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDIS 340 (473)
Q Consensus 261 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~ 340 (473)
.+|+|...+. ....+++.....+...++-+++++|..+ |+|||+|++||+++.+|.+++.|||+++..-.....
T Consensus 80 rgg~lft~l~---~~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 80 RGGDLFTRLS---KEVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred ccchhhhccc---cCCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 9999988883 4557888888999999999999999999 999999999999999999999999999877544333
Q ss_pred CcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCC
Q 011995 341 NSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFP 420 (473)
Q Consensus 341 ~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 420 (473)
+||..|||||++. ....++|.||||++++||+||..||.. +....+... .-.+|
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~------------------~~~~p 207 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA------------------ELEMP 207 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh------------------ccCCc
Confidence 8999999999998 467899999999999999999999987 222222111 11247
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCH
Q 011995 421 LKAARTVADIALRCLQKEPSERPTM 445 (473)
Q Consensus 421 ~~~~~~l~~li~~cl~~dP~~RPt~ 445 (473)
...+..+.+++.+++..+|..|.-.
T Consensus 208 ~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 208 RELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 7888999999999999999999765
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=4.6e-22 Score=210.39 Aligned_cols=245 Identities=18% Similarity=0.214 Sum_probs=173.8
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChh---hHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG---VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
+|...+.||++.|=.|.+|+.+.+...+ ||.......-. ..+.+.|++ ...++|||.+++.-+-..+ ..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVv-----KVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~--kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVV-----KVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD--KA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEE-----EEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh--HH
Confidence 5667789999999999999876665432 22222222222 334444555 5556999999987665444 56
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.|||-+|..+ +|+|.|. ..+-+...+.+.|+.|++.||..+|..+ |+|||||.+||||+.-..+.|+||...+
T Consensus 96 AylvRqyvkh-nLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 96 AYLVRQYVKH-NLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHHHhh-hhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccC
Confidence 6788888855 9999883 3445788889999999999999999999 9999999999999999999999997654
Q ss_pred cc--CCCCc-------cCcccccccCChhhhhcC-----------CCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHH
Q 011995 333 HI--PETDI-------SNSSVAAANLSVETLERG-----------LLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEER 391 (473)
Q Consensus 333 ~~--~~~~~-------~~~~~t~~y~aPE~~~~~-----------~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~ 391 (473)
.. +.++. .+...-.+|+|||.+... ..+++.||||+||++.||++ |+++|.-.
T Consensus 169 PtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------ 242 (1431)
T KOG1240|consen 169 PTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------ 242 (1431)
T ss_pred CccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------
Confidence 33 22221 122334689999998542 16789999999999999987 78888532
Q ss_pred hHhhhccc-ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 011995 392 NLVKWSRP-FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 392 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 453 (473)
++..+... .......+..+.| ..+++++..|++.||++|.++++.|+.-.
T Consensus 243 QL~aYr~~~~~~~e~~Le~Ied------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 243 QLLAYRSGNADDPEQLLEKIED------------VSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HHHhHhccCccCHHHHHHhCcC------------ccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 11111110 0000111222222 35789999999999999999999998743
No 415
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=1.3e-20 Score=170.99 Aligned_cols=182 Identities=15% Similarity=0.053 Sum_probs=132.6
Q ss_pred cCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhH-----hHHHHHHHHHhCC-CCCcccceeeeecCCCCc
Q 011995 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK-----EFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 179 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~ 252 (473)
....|++|+||+||.+.-.+.. +....+.......+ .+.+|+++|.++. |++|++++++ +.
T Consensus 6 ~~~~l~~~~f~~v~~~~~~~~k-------~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~------~~ 72 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRGGERK-------FVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW------DG 72 (218)
T ss_pred cceeecCCCcceEEEeecCCce-------eeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE------cC
Confidence 3478999999999977532211 22233333333333 5789999999995 5889999875 24
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCC-CCCceeeCCCCcEEEeccCCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEF-STANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl-kp~NILl~~~~~vkl~DFGla 331 (473)
.+++|||+.|.+|...+.. ....++.|++.+|.++|++| |+|||| ||+|||++.++.++|+|||++
T Consensus 73 ~~lvmeyI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A 139 (218)
T PRK12274 73 RHLDRSYLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLA 139 (218)
T ss_pred EEEEEeeecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCc
Confidence 6899999999998654411 11357789999999999999 999999 799999999999999999999
Q ss_pred cccCCCCc-----c----------CcccccccCChhhhhcC-CCC-CcCCchHHHHHHHHHHcCCCCCCCCC
Q 011995 332 GHIPETDI-----S----------NSSVAAANLSVETLERG-LLT-PKSNVWSFGIVLLELLTGRKNLDSRH 386 (473)
Q Consensus 332 ~~~~~~~~-----~----------~~~~t~~y~aPE~~~~~-~~s-~~sDvwSlGvvl~elltG~~p~~~~~ 386 (473)
........ . -...++.|++|+...-- ..+ .+.+.++-|+.+|.++||..+..+..
T Consensus 140 ~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 140 VRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred eecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 85543221 0 01236778888765322 233 56788899999999999998876543
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=6.1e-21 Score=181.86 Aligned_cols=237 Identities=19% Similarity=0.294 Sum_probs=151.4
Q ss_pred ccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCC----------CCccccee
Q 011995 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQH----------PNLCKLLG 243 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~H----------pnIv~l~g 243 (473)
.+..+..||.|+|+.||.++. ..+...+++++..... .....+++++|.-....+.+ -.++..++
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d---~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d 89 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTD---VETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLD 89 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEE---TTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SE
T ss_pred EEEEccccccCCceEEEEEEE---ccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeE
Confidence 455668999999999999994 4455667777766554 34456777777765555432 12222222
Q ss_pred eeecC----------CCC-----ceEEEEEeccCCChhhhhhc---C-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCc
Q 011995 244 FHARD----------GSD-----QRMLIYERLFHGSLDRLIYG---R-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQ 304 (473)
Q Consensus 244 ~~~~~----------~~~-----~~~lV~E~~~~gsL~~~l~~---~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ 304 (473)
..... +.. +.+++|+-+ .++|.+++.. . .....+....++.+..|+++.+++||..|
T Consensus 90 ~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G--- 165 (288)
T PF14531_consen 90 LLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG--- 165 (288)
T ss_dssp EEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred EEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---
Confidence 22111 001 346778877 5688887632 1 11223456677788899999999999999
Q ss_pred eeecCCCCCceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcC--------CCCCcCCchHHHHHHHHHH
Q 011995 305 AMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERG--------LLTPKSNVWSFGIVLLELL 376 (473)
Q Consensus 305 ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~--------~~s~~sDvwSlGvvl~ell 376 (473)
+||+||+|+|++++.+|.+.|+||+........... ...+..|.+||..... .++.+.|.|+||+++|.|+
T Consensus 166 lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 166 LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred eEecccceeeEEEcCCCCEEEcChHHHeecCceeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 999999999999999999999999866544332222 4455789999977432 4788999999999999999
Q ss_pred cCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 011995 377 TGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSER 442 (473)
Q Consensus 377 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~R 442 (473)
+|..||.......... | .-..+. +.++.+..||..+|+.||.+|
T Consensus 245 C~~lPf~~~~~~~~~~---~------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPE---W------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSG---G------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCcccccc---c------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999998653221110 0 111234 788999999999999999987
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=5.7e-21 Score=176.87 Aligned_cols=174 Identities=11% Similarity=0.054 Sum_probs=128.6
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHh------HHHHHHHHHhCCCCCcccceee
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKE------FINDVNTLASLQHPNLCKLLGF 244 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~Ei~~l~~l~HpnIv~l~g~ 244 (473)
..++|...+.||.|+||.||..... ...+++|+.+-.. ....... +.+|+..+.++.|++|..+.++
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~-----~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTD-----YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecC-----CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 4688999999999999999996432 2334455554322 1222222 5799999999999999999988
Q ss_pred eecCC------CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC
Q 011995 245 HARDG------SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID 318 (473)
Q Consensus 245 ~~~~~------~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~ 318 (473)
+.... ....+|||||++|.+|.++.. ++. ....+++.+|..||..+ ++|||+||+||+++
T Consensus 104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~ 169 (232)
T PRK10359 104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVS 169 (232)
T ss_pred eeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEe
Confidence 65432 135899999999999988741 222 34569999999999999 99999999999999
Q ss_pred CCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHH
Q 011995 319 KDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELL 376 (473)
Q Consensus 319 ~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ell 376 (473)
.+| ++|+|||........... ..++....+..++|+|+||+.+..+.
T Consensus 170 ~~g-i~liDfg~~~~~~e~~a~----------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRKAK----------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccchhhH----------HHHHHHhHhcccccccceeEeehHHH
Confidence 988 999999987655322111 11333444668999999999887654
No 418
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=7.4e-21 Score=181.95 Aligned_cols=196 Identities=17% Similarity=0.257 Sum_probs=141.0
Q ss_pred CCCCcccceeeeecC-------------------------CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHH
Q 011995 234 QHPNLCKLLGFHARD-------------------------GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIAL 288 (473)
Q Consensus 234 ~HpnIv~l~g~~~~~-------------------------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 288 (473)
.|||||+++++|.+. ....+|+||..++. +|..++..+ ..+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC----CCchHHHHHHHH
Confidence 599999999887543 12468999988865 899998443 466778888999
Q ss_pred HHHHHHHHhhhcCCCceeecCCCCCceee--CCC--CcEEEeccCCCcccCC--------CCccCcccccccCChhhhhc
Q 011995 289 CAAQGLTFLHEEGPFQAMYNEFSTANIQI--DKD--FSAKLSGYGCAGHIPE--------TDISNSSVAAANLSVETLER 356 (473)
Q Consensus 289 ~i~~~L~yLH~~~~~~ivHrDlkp~NILl--~~~--~~vkl~DFGla~~~~~--------~~~~~~~~t~~y~aPE~~~~ 356 (473)
|++.|+.|||.++ |.|||+|.+|||| |.| -.+.|+|||++---.. .......|....||||+...
T Consensus 349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999999 9999999999999 344 3578999998632211 11222345567899999854
Q ss_pred CC------CCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHH
Q 011995 357 GL------LTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADI 430 (473)
Q Consensus 357 ~~------~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l 430 (473)
-. --.++|.|+.|.+.||+++...||.+....... .- ....-.-|. .+..++..++++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~-~r-----------~Yqe~qLPa----lp~~vpp~~rql 489 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD-TR-----------TYQESQLPA----LPSRVPPVARQL 489 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec-hh-----------hhhhhhCCC----CcccCChHHHHH
Confidence 22 135899999999999999999999763322110 00 011111122 255667889999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHH
Q 011995 431 ALRCLQKEPSERPTMRSIFEELD 453 (473)
Q Consensus 431 i~~cl~~dP~~RPt~~eil~~L~ 453 (473)
+...|+.||++|++..=....|.
T Consensus 490 V~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHhcCCccccCCccHHHhHHH
Confidence 99999999999998765544443
No 419
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=2.7e-20 Score=169.83 Aligned_cols=140 Identities=12% Similarity=0.086 Sum_probs=104.4
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC-Chh-------h-----------------HhHHHHHHHHHhCC
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQG-------V-----------------KEFINDVNTLASLQ 234 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~-----------------~~~~~Ei~~l~~l~ 234 (473)
...||+|+||.||+|... .++.+++|+.+.... ... . .....|++++.++.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~----~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05147 2 NGCISTGKEANVYHATTA----NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV 77 (190)
T ss_pred CCccccccceEEEEEECC----CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999854 345566666654311 000 1 12235999999998
Q ss_pred CCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh-hhcCCCceeecCCCCC
Q 011995 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL-HEEGPFQAMYNEFSTA 313 (473)
Q Consensus 235 HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yL-H~~~~~~ivHrDlkp~ 313 (473)
++++.....+.. ...+|||||++++++...+. ....+++..+..++.|++.+|.|| |+.+ |+||||||+
T Consensus 78 ~~~v~~p~~~~~----~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~ 147 (190)
T cd05147 78 TAGIPCPEPILL----KSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEY 147 (190)
T ss_pred HCCCCCCcEEEe----cCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHH
Confidence 887754433322 22389999998887765432 234688999999999999999999 6888 999999999
Q ss_pred ceeeCCCCcEEEeccCCCccc
Q 011995 314 NIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 314 NILl~~~~~vkl~DFGla~~~ 334 (473)
|||++ ++.++|+|||++...
T Consensus 148 NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 148 NLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HEEEE-CCcEEEEEccccccC
Confidence 99998 478999999999754
No 420
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.83 E-value=8.9e-22 Score=195.47 Aligned_cols=170 Identities=16% Similarity=0.223 Sum_probs=129.8
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
++||.|++|...+|.+||.++......++...+.++.|++.|+.| ++ .+|+|+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence 378899999999999999876666778899999999999999999 77 999999999999999999999999998
Q ss_pred cccCCCC--------ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc-CCCCCCCCChHHHHhHhhhcccccc
Q 011995 332 GHIPETD--------ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT-GRKNLDSRHPKEERNLVKWSRPFLA 402 (473)
Q Consensus 332 ~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 402 (473)
....... .+...+|.+||+||.+.+..|+.++|||+||++|+||+. -...+.-..
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~---------------- 467 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA---------------- 467 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH----------------
Confidence 7664332 355688999999999999999999999999999999997 222221100
Q ss_pred cccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 011995 403 DDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRS 447 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 447 (473)
.+..+-+..+.+.+..+. ++-..|+.+++...|.+||++.+
T Consensus 468 ---t~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 468 ---TLTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred ---hhhhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCchHHH
Confidence 011111111111111111 23358999999999999994443
No 421
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.82 E-value=6.9e-20 Score=185.32 Aligned_cols=217 Identities=23% Similarity=0.338 Sum_probs=165.8
Q ss_pred HHhCCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecC
Q 011995 230 LASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNE 309 (473)
Q Consensus 230 l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrD 309 (473)
|+.+.|.|+.+++|.+.+. ...++|.+||.-|+|.|.+.. ....++|.....++++|+.||+|||..- -..|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeee
Confidence 4568999999999999887 789999999999999999964 4567999999999999999999999876 239999
Q ss_pred CCCCceeeCCCCcEEEeccCCCcccCCC----CccCcccccccCChhhhhcCC-------CCCcCCchHHHHHHHHHHcC
Q 011995 310 FSTANIQIDKDFSAKLSGYGCAGHIPET----DISNSSVAAANLSVETLERGL-------LTPKSNVWSFGIVLLELLTG 378 (473)
Q Consensus 310 lkp~NILl~~~~~vkl~DFGla~~~~~~----~~~~~~~t~~y~aPE~~~~~~-------~s~~sDvwSlGvvl~elltG 378 (473)
++..|+++|....+||+|||+....... ......-..-|.|||.+.... .+.+.||||||++++|+++.
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 9999999999999999999998766431 111122346789999997642 46779999999999999999
Q ss_pred CCCCCCCChHHH-HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 011995 379 RKNLDSRHPKEE-RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQES 457 (473)
Q Consensus 379 ~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~~ 457 (473)
..||........ .+++.+... + ......|.+.. .....+++..++..||..+|..||++.+|-..++.+..
T Consensus 155 ~~~~~~~~~~~~~~eii~~~~~----~--~~~~~rP~i~~--~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRVKK----G--GSNPFRPSIEL--LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cCccccccccCChHHHHHHHHh----c--CCCCcCcchhh--hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999987443222 223322111 0 00111111110 01344578999999999999999999999999998887
Q ss_pred ccC
Q 011995 458 RKS 460 (473)
Q Consensus 458 ~~~ 460 (473)
...
T Consensus 227 ~~~ 229 (484)
T KOG1023|consen 227 GGS 229 (484)
T ss_pred ccc
Confidence 654
No 422
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=3.1e-19 Score=163.17 Aligned_cols=142 Identities=14% Similarity=0.147 Sum_probs=107.0
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC--------------------hh-----hHhHHHHHHHHHhCC
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--------------------QG-----VKEFINDVNTLASLQ 234 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~-----~~~~~~Ei~~l~~l~ 234 (473)
.+.||+|+||.||+|... .+..+++|+.+..... .. ...+.+|.+.+.++.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~----~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05145 2 NGCISTGKEANVYHARTG----DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY 77 (190)
T ss_pred CceeecCCCcEEEEEEcC----CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999854 3455566665543210 00 122357899999999
Q ss_pred CCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCC
Q 011995 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTA 313 (473)
Q Consensus 235 HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~ 313 (473)
|+++.....+... ..+|||||++++++...+. ....++......++.|++.+|.+||+ .+ |+||||||+
T Consensus 78 ~~~i~~p~~~~~~----~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~ 147 (190)
T cd05145 78 EAGVPVPEPILLK----KNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEY 147 (190)
T ss_pred hCCCCCceEEEec----CCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChh
Confidence 9988655544332 2489999998886544321 12357788999999999999999999 88 999999999
Q ss_pred ceeeCCCCcEEEeccCCCcccCC
Q 011995 314 NIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 314 NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|||++ ++.++|+|||++.....
T Consensus 148 NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 148 NILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hEEEE-CCCEEEEEcccceecCC
Confidence 99999 88999999999987643
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=1.1e-18 Score=160.98 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=102.6
Q ss_pred ccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-----CCCCcccceeeeecCCC-C
Q 011995 178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-----QHPNLCKLLGFHARDGS-D 251 (473)
Q Consensus 178 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~l~g~~~~~~~-~ 251 (473)
.....||+|+||.||. +.++. .+ ++|+..... ....+.+.+|+.+++.+ .||||++++|++.++.+ .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~---~k-~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDA---QR-CIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred CCcceecCCCceEEEE--CCCCc---Ce-EEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 4458899999999995 33221 12 355555432 23456799999999999 57999999999987632 2
Q ss_pred c-eEEEEEe--ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH-HHhhhcCCCceeecCCCCCceeeCC----CCcE
Q 011995 252 Q-RMLIYER--LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGL-TFLHEEGPFQAMYNEFSTANIQIDK----DFSA 323 (473)
Q Consensus 252 ~-~~lV~E~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L-~yLH~~~~~~ivHrDlkp~NILl~~----~~~v 323 (473)
. +.+|+|| +.+|+|.+++.+. .+++. ..++.+++.++ +|||+++ ||||||||+|||++. ++.+
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcE
Confidence 3 3378999 5579999999431 35555 35678888888 9999999 999999999999974 3479
Q ss_pred EEeccCCC
Q 011995 324 KLSGYGCA 331 (473)
Q Consensus 324 kl~DFGla 331 (473)
+|+||+.+
T Consensus 149 ~LiDg~G~ 156 (210)
T PRK10345 149 VVCDNIGE 156 (210)
T ss_pred EEEECCCC
Confidence 99995433
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=7.4e-19 Score=189.51 Aligned_cols=253 Identities=16% Similarity=0.163 Sum_probs=175.2
Q ss_pred HHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC---CCCcccceeee
Q 011995 169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFH 245 (473)
Q Consensus 169 el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~ 245 (473)
+++-....|.+.+.||+|+||.||+|...+ ++.+++|+.+-.. .+. |.-=.+++.+|+ -+.|..+...+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~----~~~~alK~e~P~~--~WE--fYI~~q~~~RLk~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN----GKLVALKVEKPPN--PWE--FYICLQVMERLKPQMLPSIMHISSAH 763 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCC----CcEEEEEeecCCC--cee--eeehHHHHHhhchhhhcchHHHHHHH
Confidence 344445678899999999999999998554 5666676654321 121 111122333333 22344444443
Q ss_pred ecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC-------
Q 011995 246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID------- 318 (473)
Q Consensus 246 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~------- 318 (473)
... +.-+||+||.+.|+|.+++. ....++|..++.+..|++..+++||..+ |||+||||+|+||.
T Consensus 764 ~~~--~~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~ 835 (974)
T KOG1166|consen 764 VFQ--NASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADS 835 (974)
T ss_pred ccC--CcceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCC
Confidence 333 56789999999999999994 5567999999999999999999999999 99999999999993
Q ss_pred CCCcEEEeccCCCccc---CCC-CccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHh
Q 011995 319 KDFSAKLSGYGCAGHI---PET-DISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLV 394 (473)
Q Consensus 319 ~~~~vkl~DFGla~~~---~~~-~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~ 394 (473)
....++|+|||.+-.+ ... .....+.|-.+-.+|...|..|++..|.|+|+-+++.||.|+.- +
T Consensus 836 ~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~-------q----- 903 (974)
T KOG1166|consen 836 DSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM-------E----- 903 (974)
T ss_pred cccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH-------H-----
Confidence 2345899999988543 222 44556778889999999999999999999999999999998641 0
Q ss_pred hhcccccccccccccccccccCCCCCHHHHHH-HHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccCC
Q 011995 395 KWSRPFLADDCRLSLIMDPQLKGRFPLKAART-VADIALRCLQKEPSERPTMRSIFEELDRQESRKSS 461 (473)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-l~~li~~cl~~dP~~RPt~~eil~~L~~l~~~~~~ 461 (473)
.| ....+ .++.. ++.....+ ..+|+..+|..|-..=|...+|...|++...++..
T Consensus 904 ~~-----~g~~~---~~~~~----~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~~~ 959 (974)
T KOG1166|consen 904 VK-----NGSSW---MVKTN----FPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEHFT 959 (974)
T ss_pred hc-----CCcce---ecccc----chhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHHHH
Confidence 00 00000 01111 12222222 33566777775555557888888888877655443
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=4.1e-18 Score=158.32 Aligned_cols=135 Identities=12% Similarity=0.145 Sum_probs=106.3
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC--C-----hhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCce
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--S-----QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR 253 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~ 253 (473)
+.||+|++|.||+|.+.+... .+|+...... . .....+.+|++++..+.|++|.....++... +..
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~-----~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKA-----VIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP--ENF 74 (211)
T ss_pred cccccCceEEEEEEeeCCCce-----EEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC--CCC
Confidence 579999999999998744332 2333222111 0 1124578899999999999988777676554 677
Q ss_pred EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++||||++|++|.+++... .+ .+..++.+++.+|.+||..+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 75 ~lv~e~~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEEEeCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 8999999999999998432 12 78899999999999999999 99999999999999 78899999998764
No 426
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.75 E-value=3.5e-18 Score=180.63 Aligned_cols=147 Identities=11% Similarity=0.136 Sum_probs=113.6
Q ss_pred HHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecC
Q 011995 171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD 248 (473)
Q Consensus 171 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~ 248 (473)
......|...+.||+|+||+||+|.+.+.....+....+..+... .......+.+|++++..++|++++....++...
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 334455667799999999999999876654433322211111111 112235688999999999999999877776654
Q ss_pred CCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEecc
Q 011995 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGY 328 (473)
Q Consensus 249 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DF 328 (473)
...++||||+++++|.+++. ....++.+++.+|.|||+.+ ++||||||+|||+ .++.++|+||
T Consensus 409 --~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDF 471 (535)
T PRK09605 409 --EEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDF 471 (535)
T ss_pred --CCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeC
Confidence 56789999999999999883 45789999999999999999 9999999999999 5778999999
Q ss_pred CCCccc
Q 011995 329 GCAGHI 334 (473)
Q Consensus 329 Gla~~~ 334 (473)
|+++..
T Consensus 472 Gla~~~ 477 (535)
T PRK09605 472 GLGKYS 477 (535)
T ss_pred cccccC
Confidence 998753
No 427
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.74 E-value=2.2e-18 Score=182.67 Aligned_cols=137 Identities=19% Similarity=0.222 Sum_probs=108.0
Q ss_pred HHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCC--------C---------CccCcccccccCChhh
Q 011995 291 AQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE--------T---------DISNSSVAAANLSVET 353 (473)
Q Consensus 291 ~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~--------~---------~~~~~~~t~~y~aPE~ 353 (473)
+.+++|||+.+ |+|||+||+|.||+.-|.+|+.|||+++.... . .....++|+.|+|||+
T Consensus 153 vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV 229 (1205)
T KOG0606|consen 153 VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV 229 (1205)
T ss_pred hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence 67899999999 99999999999999999999999999864311 0 1235588999999999
Q ss_pred hhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHH
Q 011995 354 LERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALR 433 (473)
Q Consensus 354 ~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~ 433 (473)
+....|+..+|+|++|+|+||.+-|..||.+..+.+.+..+- .++.....- ......++++++.+
T Consensus 230 ilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vi------sd~i~wpE~---------dea~p~Ea~dli~~ 294 (1205)
T KOG0606|consen 230 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI------SDDIEWPEE---------DEALPPEAQDLIEQ 294 (1205)
T ss_pred hhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhh------hhhcccccc---------CcCCCHHHHHHHHH
Confidence 999999999999999999999999999999987766543221 111000000 12334789999999
Q ss_pred hcccCCCCCCCH
Q 011995 434 CLQKEPSERPTM 445 (473)
Q Consensus 434 cl~~dP~~RPt~ 445 (473)
+|+.+|..|.-.
T Consensus 295 LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 295 LLRQNPLCRLGT 306 (1205)
T ss_pred HHHhChHhhccc
Confidence 999999999643
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=3.1e-17 Score=150.95 Aligned_cols=131 Identities=15% Similarity=0.184 Sum_probs=99.8
Q ss_pred ceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CC-----hhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceE
Q 011995 182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SS-----QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254 (473)
Q Consensus 182 ~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~ 254 (473)
.||+|+||.||+|.+.+.. +.+|+..... .. ....++.+|++++..++|+++.....++... +..+
T Consensus 1 ~ig~G~~~~vy~~~~~~~~-----~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLK-----AVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP--DNKT 73 (199)
T ss_pred CCCCCceEEEEEeecCCcc-----EEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCE
Confidence 4899999999999854422 2333322211 11 1135678899999999988766555454444 5678
Q ss_pred EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 255 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+||||++|++|.+++.... . .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 74 lv~e~~~g~~l~~~~~~~~-------~---~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN-------D---ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEEECCccHHHHHhhcH-------H---HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999999998873311 0 78999999999999999 99999999999999 88999999998865
No 429
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=7e-17 Score=152.44 Aligned_cols=145 Identities=15% Similarity=0.122 Sum_probs=105.9
Q ss_pred ccccCcceeecCCceEEEEE-ECCCCeeeeEEEEEEEecCCCC-------------------h----hhHhHHHHHHHHH
Q 011995 176 NFFSDRCISEGLSSVMYRAS-FGDDASTSKKFEATVTRLNPSS-------------------Q----GVKEFINDVNTLA 231 (473)
Q Consensus 176 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~~~~~~~~~~~~~~~~~-------------------~----~~~~~~~Ei~~l~ 231 (473)
-|.+.+.||+|+||.||+|. ... .+..+++|+.+..... . ....+.+|+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~---~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~ 105 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDG---SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQ 105 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCC---CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 47888999999999999997 221 2344556655533110 0 1123568999999
Q ss_pred hCCCCC--cccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecC
Q 011995 232 SLQHPN--LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNE 309 (473)
Q Consensus 232 ~l~Hpn--Iv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrD 309 (473)
++.+.+ +.+++++ ...+|||||+++++|...+.. ...+.......++.|++.+|.+||..+ .|+|||
T Consensus 106 ~L~~~~i~~p~~~~~------~~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~D 174 (237)
T smart00090 106 RLYEAGVPVPKPIAW------RRNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGD 174 (237)
T ss_pred HHHhcCCCCCeeeEe------cCceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCC
Confidence 997633 3334332 234899999999888765422 234566677899999999999999997 499999
Q ss_pred CCCCceeeCCCCcEEEeccCCCcccC
Q 011995 310 FSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 310 lkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
|||+||+++ ++.++|+|||.+....
T Consensus 175 ikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 175 LSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred CChhhEEEE-CCCEEEEEChhhhccC
Confidence 999999999 8899999999987543
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.69 E-value=2e-16 Score=145.56 Aligned_cols=148 Identities=15% Similarity=0.079 Sum_probs=108.8
Q ss_pred HHHHHHHhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC---------------------hhhHhHHH
Q 011995 167 LDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---------------------QGVKEFIN 225 (473)
Q Consensus 167 ~~el~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~ 225 (473)
+.++......|...+.||+|+||.||++...+ +..+++|+.+..... .....+..
T Consensus 7 ~~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (198)
T cd05144 7 LHTLVKRGVVESLGNQIGVGKESDVYLALDPD----GNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQK 82 (198)
T ss_pred HHHHHHcCchhhcCCccccCcceEEEEEEcCC----CCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHH
Confidence 34555554458888999999999999998642 344556654432100 01123677
Q ss_pred HHHHHHhCCCCC--cccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC
Q 011995 226 DVNTLASLQHPN--LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPF 303 (473)
Q Consensus 226 Ei~~l~~l~Hpn--Iv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~ 303 (473)
|+.++..+.|.+ +...++. ...++||||+++++|..+... .....++.+++.++.++|..+
T Consensus 83 E~~~l~~l~~~~i~v~~~~~~------~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g-- 145 (198)
T cd05144 83 EFAALKALYEEGFPVPKPIDW------NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG-- 145 (198)
T ss_pred HHHHHHHHHHcCCCCCceeec------CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC--
Confidence 899999998874 3444331 345899999999998765420 235678899999999999998
Q ss_pred ceeecCCCCCceeeCCCCcEEEeccCCCcccCC
Q 011995 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 304 ~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~ 336 (473)
|+|+||||+||+++.++.++|+|||++.....
T Consensus 146 -i~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 146 -IIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred -CCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence 99999999999999999999999999865543
No 431
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.63 E-value=3.5e-15 Score=141.14 Aligned_cols=143 Identities=13% Similarity=0.097 Sum_probs=102.1
Q ss_pred ccee-ecCCceEEEEEECCCCeeeeEEEEE-----EEecC--CCChhhHhHHHHHHHHHhCCCCCc--ccceeeeecCCC
Q 011995 181 RCIS-EGLSSVMYRASFGDDASTSKKFEAT-----VTRLN--PSSQGVKEFINDVNTLASLQHPNL--CKLLGFHARDGS 250 (473)
Q Consensus 181 ~~lG-~G~~g~Vy~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnI--v~l~g~~~~~~~ 250 (473)
..|| .||.|+||.+...+...+.+.+... +.+.. ........+.+|++++..+.|++| +..+++......
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~ 116 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG 116 (239)
T ss_pred ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence 6687 8999999999876544333333210 10100 011234567899999999998875 667766544321
Q ss_pred C--ceEEEEEeccC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEec
Q 011995 251 D--QRMLIYERLFH-GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSG 327 (473)
Q Consensus 251 ~--~~~lV~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~D 327 (473)
. ..++||||+++ .+|.+++.. ..++.. .+.+|+.+|.+||+.| |+|+||||.|||++.++.++|+|
T Consensus 117 ~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 117 LFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEE
Confidence 1 23599999997 689888743 235543 3578999999999999 99999999999999999999999
Q ss_pred cCCCccc
Q 011995 328 YGCAGHI 334 (473)
Q Consensus 328 FGla~~~ 334 (473)
||.+...
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9988654
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=8.2e-15 Score=127.49 Aligned_cols=134 Identities=19% Similarity=0.189 Sum_probs=105.4
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCC--CCcccceeeeecCCCCceEEEE
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH--PNLCKLLGFHARDGSDQRMLIY 257 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~H--pnIv~l~g~~~~~~~~~~~lV~ 257 (473)
.+.||+|.++.||++...+ +.+.+|... .... ...+.+|+.++..++| .++++++++.... +..+++|
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-----~~~~iK~~~--~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~--~~~~~v~ 72 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-----EDYVLKINP--SREK-GADREREVAILQLLARKGLPVPKVLASGESD--GWSYLLM 72 (155)
T ss_pred ceecccccccceEEEEecC-----CeEEEEecC--CCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--CccEEEE
Confidence 4789999999999998644 223333332 2222 4678899999999976 5888888776544 6789999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
||+.++.+..+ +......++.+++.+|++||......++|+|++|.|||++..+.++++|||.+..
T Consensus 73 e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99988777543 4567788899999999999986433499999999999999989999999998764
No 433
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=1.8e-16 Score=167.69 Aligned_cols=252 Identities=20% Similarity=0.263 Sum_probs=182.2
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC---CChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCc
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~ 252 (473)
|...+-||+|.|+.|-......+.. . .++.+.... +......+..|..+-..+. |.|++.+++..... +.
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~--~--~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~--~~ 95 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPE--S--SSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSP--RS 95 (601)
T ss_pred ccccccccccccchhhhhhhcCCCc--c--eeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCC--cc
Confidence 4444679999999998876433322 1 233333322 2333455566888877786 99999999987655 78
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh-hcCCCceeecCCCCCceeeCCCC-cEEEeccCC
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH-EEGPFQAMYNEFSTANIQIDKDF-SAKLSGYGC 330 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH-~~~~~~ivHrDlkp~NILl~~~~-~vkl~DFGl 330 (473)
.+++++|..++++.+-+.. .+....+......++.|+..++.|+| ..+ +.|+||||+|.+++..+ ..+++|||+
T Consensus 96 ~~~~~~~s~g~~~f~~i~~-~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~ 171 (601)
T KOG0590|consen 96 YLLSLSYSDGGSLFSKISH-PDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGL 171 (601)
T ss_pred cccccCccccccccccccc-CCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchh
Confidence 8999999999999888731 12224556677889999999999999 887 99999999999999999 999999999
Q ss_pred CcccCC-CC----ccCccc-ccccCChhhhhcC-CCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccc
Q 011995 331 AGHIPE-TD----ISNSSV-AAANLSVETLERG-LLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLAD 403 (473)
Q Consensus 331 a~~~~~-~~----~~~~~~-t~~y~aPE~~~~~-~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 403 (473)
|..+.. .. ....++ ++.|+|||...+. ...+..|+||.|+++.-+++|..||......... ...|. ..
T Consensus 172 At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~~~~----~~ 246 (601)
T KOG0590|consen 172 ATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YSSWK----SN 246 (601)
T ss_pred hccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ceeec----cc
Confidence 987755 22 123466 8999999999874 4578899999999999999999999765443311 11111 00
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 011995 404 DCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEE 451 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 451 (473)
. ................+++.+++..+|..|.+.+++...
T Consensus 247 ~--------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 247 K--------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred c--------cccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 0 000011133455677889999999999999998877543
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=9.7e-15 Score=132.90 Aligned_cols=138 Identities=15% Similarity=0.115 Sum_probs=92.7
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC--ChhhHh---------------------HHHHHHHHHhCCCC
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKE---------------------FINDVNTLASLQHP 236 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------------------~~~Ei~~l~~l~Hp 236 (473)
.+.||+|+||.||+|...+ ...+++|+.+.... ...... ...|...+..+.+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~----~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDGD----GEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA 77 (187)
T ss_pred CcccccccceeEEEEECCC----CCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence 4789999999999998652 23455655443211 111111 13566666666443
Q ss_pred C--cccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCceeecCCCCC
Q 011995 237 N--LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQAMYNEFSTA 313 (473)
Q Consensus 237 n--Iv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlkp~ 313 (473)
. +.+++++ ...++||||++++.+........ ... .....++.+++.++.++|. .+ |+|+||||+
T Consensus 78 ~~~~~~~~~~------~~~~lv~e~~~g~~~~~~~l~~~---~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~ 144 (187)
T cd05119 78 GVPVPKPIDL------NRHVLVMEFIGGDGIPAPRLKDV---RLL-EDPEELYDQILELMRKLYREAG---LVHGDLSEY 144 (187)
T ss_pred CCCCCceEec------CCCEEEEEEeCCCCccChhhhhh---hhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChh
Confidence 3 3344332 24589999999855432111100 011 5678899999999999999 88 999999999
Q ss_pred ceeeCCCCcEEEeccCCCcccC
Q 011995 314 NIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 314 NILl~~~~~vkl~DFGla~~~~ 335 (473)
||+++ ++.++|+|||.+....
T Consensus 145 Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 145 NILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred hEEEE-CCcEEEEECccccccc
Confidence 99999 8999999999987553
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=3.7e-13 Score=136.82 Aligned_cols=248 Identities=17% Similarity=0.195 Sum_probs=176.6
Q ss_pred ccccCcceee--cCCceEEEEEECCCCeeeeEEEEEEEecCC-CChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCCC
Q 011995 176 NFFSDRCISE--GLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD 251 (473)
Q Consensus 176 ~f~~~~~lG~--G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~~ 251 (473)
.|.....+|. |.+|.||.+.... ......++++.-.... .......=.+|+.....+ .|+|.++.+..+... +
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~-~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~--~ 191 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTN-SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS--G 191 (524)
T ss_pred hcccccccccCCCCCceeecccCCc-ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC--C
Confidence 4666688999 9999999997522 3344555555433332 222233345677777777 599999977776554 7
Q ss_pred ceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHH----HHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEe
Q 011995 252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQ----GLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLS 326 (473)
Q Consensus 252 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~ 326 (473)
..++-+|++ +.+|..+.+.. ...++......+..+..+ ||.++|..+ ++|-|+||.||++..+ ...++.
T Consensus 192 ~lfiqtE~~-~~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~ 265 (524)
T KOG0601|consen 192 ILFIQTELC-GESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLT 265 (524)
T ss_pred cceeeeccc-cchhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecC
Confidence 888889988 46888887542 334667777778888888 999999999 9999999999999999 889999
Q ss_pred ccCCCcccCCCCccCc-------ccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccc
Q 011995 327 GYGCAGHIPETDISNS-------SVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRP 399 (473)
Q Consensus 327 DFGla~~~~~~~~~~~-------~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 399 (473)
|||+...+........ -+...|++||..+ +.++..+|+|++|.++++..+|......... ..|..
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~------~~W~~- 337 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN------SSWSQ- 337 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC------CCccc-
Confidence 9999887765543222 3456899999874 4689999999999999999998776543311 11211
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 011995 400 FLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFE 450 (473)
Q Consensus 400 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 450 (473)
.. ...+...|....+.++...+..+++.++-.|++++.++.
T Consensus 338 ---~r-------~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 ---LR-------QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ---cc-------cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 00 011222334445566677999999999999999887653
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=6.9e-14 Score=131.67 Aligned_cols=204 Identities=18% Similarity=0.228 Sum_probs=141.7
Q ss_pred HHHHHhCCCCCcccceeeeecCC---CCceEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 011995 227 VNTLASLQHPNLCKLLGFHARDG---SDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGP 302 (473)
Q Consensus 227 i~~l~~l~HpnIv~l~g~~~~~~---~~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~ 302 (473)
+.-|-.+-|-|||+++.|+.+.. .....++.|||..|+|..+|.+.. ....+....-.+|+.||+.||.|||+-.|
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P 197 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence 44555667999999999886532 245788999999999999996532 34567888889999999999999999875
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCcccCC------CCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHH
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPE------TDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELL 376 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~------~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ell 376 (473)
+|+|+++..+.|++..+|-+||.----...... .......+-++|.+||.-.....+.++|||+||...+||.
T Consensus 198 -piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 -PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred -ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 599999999999999999999853211111000 0111223457899999877777788999999999999998
Q ss_pred cCCCCCCCCChHHH-HhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 377 TGRKNLDSRHPKEE-RNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 377 tG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
-+..--........ ...+.. .+..+-+ ..-++++..|++-.|..||+|++++-..
T Consensus 277 ilEiq~tnseS~~~~ee~ia~---------~i~~len------------~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIAN---------VIIGLEN------------GLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HheeccCCCcceeehhhhhhh---------heeeccC------------ccccCcCcccccCCCCCCcchhhhhcCc
Confidence 77653221111100 000000 0000001 1124788999999999999999987543
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.37 E-value=4.6e-12 Score=130.11 Aligned_cols=143 Identities=15% Similarity=0.118 Sum_probs=95.2
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChh---------------------------------------h
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG---------------------------------------V 220 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~ 220 (473)
.+.||.|++|.||+|++.++ +.+++|+.+-...... .
T Consensus 122 ~~plasaSigQVh~A~l~~G----~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDG----KEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred CcceeeeehhheEEEEecCC----CEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 36899999999999998765 3455666543211000 0
Q ss_pred HhHHHHHHHHHhC----CCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHH-HHH
Q 011995 221 KEFINDVNTLASL----QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQ-GLT 295 (473)
Q Consensus 221 ~~~~~Ei~~l~~l----~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-~L~ 295 (473)
-.|.+|...+.++ +|.+-+.+-.++.+.. ...+|||||++|++|.++...... .+ .+..++..++. .+.
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRT-SERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLN 271 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhc-CCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHH
Confidence 1244555555555 2333333333332221 457899999999999887643211 12 23456666665 468
Q ss_pred HhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 296 FLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 296 yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
.+|..| ++|+|++|.||+++.++.++++|||++..+.
T Consensus 272 ql~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 272 QVLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 889998 9999999999999999999999999987764
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.32 E-value=9.3e-12 Score=111.18 Aligned_cols=130 Identities=18% Similarity=0.156 Sum_probs=91.1
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcc-cceeeeecCCCCceEEEEEe
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC-KLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv-~l~g~~~~~~~~~~~lV~E~ 259 (473)
+.|+.|.++.||++...+ ..+.+|+.. ........+.+|+.++..+.+.+++ +++.+. . ...++||||
T Consensus 4 ~~l~~G~~~~vy~~~~~~-----~~~~lK~~~--~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~--~~~~lv~e~ 72 (170)
T cd05151 4 SPLKGGMTNKNYRVEVAN-----KKYVVRIPG--NGTELLINRENEAENSKLAAEAGIGPKLYYFD--P--ETGVLITEF 72 (170)
T ss_pred eecCCcccCceEEEEECC-----eEEEEEeCC--CCcccccCHHHHHHHHHHHHHhCCCCceEEEe--C--CCCeEEEEe
Confidence 568899999999998542 233344332 2221234567899999998665554 444432 2 345799999
Q ss_pred ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC--CCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG--PFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~--~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+++.++.+.. .....++.+++.+|+.||..+ +..++|+|++|.||+++ ++.++++|||.+..
T Consensus 73 i~G~~l~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 73 IEGSELLTED-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cCCCcccccc-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9998875431 111345678999999999987 22359999999999999 66899999998753
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=1.9e-12 Score=131.74 Aligned_cols=252 Identities=16% Similarity=0.082 Sum_probs=169.1
Q ss_pred HhcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-CCChhhHhHHHHHHHHHhC-CCCCcccceeeeecCCC
Q 011995 173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS 250 (473)
Q Consensus 173 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~~~~~~~ 250 (473)
.+.+|.....||.|.|+.|+....+.. ...+++++-.... ........-..|+.+...+ .|.+++..+.-+...
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~--~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-- 338 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPE--GDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-- 338 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCC--CCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc--
Confidence 345688888999999999999875422 2223322221111 1111112224566666665 577888766555444
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCC-CcEEEeccC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKD-FSAKLSGYG 329 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~vkl~DFG 329 (473)
...|+-.|||+++++...+ .-...++...++++..|++.++.++|+.. ++|+|+||+||++..+ +..++.|||
T Consensus 339 r~~~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred ccccCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccc
Confidence 5677899999999887665 22345788889999999999999999998 9999999999999886 888999999
Q ss_pred CCcccCCCCccCcccccccC--ChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccc
Q 011995 330 CAGHIPETDISNSSVAAANL--SVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRL 407 (473)
Q Consensus 330 la~~~~~~~~~~~~~t~~y~--aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (473)
++..+..... ....+.+++ +++......+..+.|++|||.-+.|.++|...-.... .|..
T Consensus 413 ~~t~~~~~~~-~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~~~--------- 474 (524)
T KOG0601|consen 413 CWTRLAFSSG-VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QSLT--------- 474 (524)
T ss_pred cccccceecc-cccccccccccchhhccccccccccccccccccccccccCcccCcccc--------ccee---------
Confidence 9865322111 112233444 5556666778999999999999999999876433211 1111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 011995 408 SLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEELDRQE 456 (473)
Q Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~l~ 456 (473)
+...... . .......+..+...++..++..||.+.++....+...
T Consensus 475 --i~~~~~p-~-~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 475 --IRSGDTP-N-LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred --eeccccc-C-CCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 0000000 0 1122377888899999999999999998877665443
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.28 E-value=1.1e-10 Score=120.18 Aligned_cols=147 Identities=16% Similarity=0.235 Sum_probs=112.7
Q ss_pred hhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011995 218 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297 (473)
Q Consensus 218 ~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yL 297 (473)
.......+-++.|+.++||||++++..+..+ ...|||.|-+ --|..++.. +....+...+.||+.||.||
T Consensus 51 ~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~--~~~ylvTErV--~Pl~~~lk~------l~~~~v~~Gl~qIl~AL~FL 120 (690)
T KOG1243|consen 51 EVTELAKRAVKRLKTLRHPNILSYLDTTEEE--GTLYLVTERV--RPLETVLKE------LGKEEVCLGLFQILAALSFL 120 (690)
T ss_pred hhhHHHHHHHHHhhhccCchhhhhhhhhccc--CceEEEeecc--ccHHHHHHH------hHHHHHHHHHHHHHHHHHHH
Confidence 3345567788999999999999999988766 6899999987 356666633 23567778899999999999
Q ss_pred hhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCc--cCcccccccCChhhhhcCCCCCcCCchHHHHHHHHH
Q 011995 298 HEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDI--SNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLEL 375 (473)
Q Consensus 298 H~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~--~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~el 375 (473)
|+.+ .++|++|..+.|+++..|..||++|-++........ .....-..|..|+.+.... ...|.|.|||+++|+
T Consensus 121 ~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el 196 (690)
T KOG1243|consen 121 NDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEEL 196 (690)
T ss_pred hccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHHH
Confidence 9777 599999999999999999999999987754432221 1111223456666653322 457999999999999
Q ss_pred HcC
Q 011995 376 LTG 378 (473)
Q Consensus 376 ltG 378 (473)
+.|
T Consensus 197 ~ng 199 (690)
T KOG1243|consen 197 FNG 199 (690)
T ss_pred hCc
Confidence 999
No 441
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.24 E-value=2.9e-12 Score=136.87 Aligned_cols=245 Identities=18% Similarity=0.204 Sum_probs=163.9
Q ss_pred cccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCc
Q 011995 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ 252 (473)
Q Consensus 175 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~ 252 (473)
+.|.+.+-+-+|.++.++.+.-. ..+..+..++..+.. .....+.+..+-.++-..+||.++...--+.. ...
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa---~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~--rsP 878 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPA---GSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC--RSP 878 (1205)
T ss_pred ccceecccccCCCCcccccCCcc---ccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--CCC
Confidence 44555566677777777766422 122222222222111 11123334444444444566777655433222 267
Q ss_pred eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 253 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.+||++|+.+++|...|+.. +..+..........+.++++|||... ++|+|++|.|+|+..++..++.|||...
T Consensus 879 ~~L~~~~~~~~~~~Skl~~~---~~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHNS---GCLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred cchhhHHhccCCchhhhhcC---CCcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccc
Confidence 89999999999999988543 24555556666777889999999997 9999999999999999999999998432
Q ss_pred ccC-------C----------------------CC----ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCC
Q 011995 333 HIP-------E----------------------TD----ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGR 379 (473)
Q Consensus 333 ~~~-------~----------------------~~----~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~ 379 (473)
... . .+ .....+|+.|.+||...+......+|+|++|++++|.++|.
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~ 1032 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGI 1032 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCC
Confidence 110 0 00 11235688999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHhHhh-hcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 011995 380 KNLDSRHPKEERNLVK-WSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMR 446 (473)
Q Consensus 380 ~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 446 (473)
+||..........-+. ...+|. .-+...+.++.+++...+..++.+|..+.
T Consensus 1033 pp~na~tpq~~f~ni~~~~~~~p----------------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1033 PPFNAETPQQIFENILNRDIPWP----------------EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCcchhhhhhccccCCCCCC----------------CCccccChhhhhhhhhhhccCchhccCcc
Confidence 9998766554332111 000100 01445667888999999999999998765
No 442
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.20 E-value=3.2e-11 Score=125.59 Aligned_cols=148 Identities=11% Similarity=0.150 Sum_probs=90.4
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCC---------------------------------hhh
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---------------------------------QGV 220 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~ 220 (473)
...|+. +.||+|++|.||+|++.++ ++.+++|+.+-.... +..
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~---G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~ 194 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDN---GREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFE 194 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCC---CCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHH
Confidence 345666 7899999999999998762 345666666532100 011
Q ss_pred H------hHHHHHHHHHhCC----CCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCC---CCCHHHHHHHH
Q 011995 221 K------EFINDVNTLASLQ----HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP---PIDWNTRVKIA 287 (473)
Q Consensus 221 ~------~~~~Ei~~l~~l~----HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~---~l~~~~~~~i~ 287 (473)
+ .|.+|...+.+++ +.+.+.+-.++.+- ....+|||||++|+.+.++-.-...+. .+....+..++
T Consensus 195 ~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~ 273 (537)
T PRK04750 195 KTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFF 273 (537)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHH
Confidence 1 2344444444442 33333333333321 145689999999999987431111111 12222233333
Q ss_pred HHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC----cEEEeccCCCcccCC
Q 011995 288 LCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF----SAKLSGYGCAGHIPE 336 (473)
Q Consensus 288 ~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~----~vkl~DFGla~~~~~ 336 (473)
.| ++..| ++|+|+||.||+++.++ .++++|||++..+..
T Consensus 274 ~Q-------if~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 274 TQ-------VFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HH-------HHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 33 34577 99999999999999888 999999999877643
No 443
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.16 E-value=2.7e-10 Score=99.86 Aligned_cols=149 Identities=15% Similarity=0.118 Sum_probs=104.3
Q ss_pred cCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC--CChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEE
Q 011995 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 179 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV 256 (473)
....|-+|+-+.|+++.+.+.....|....|..+... ..-...+-.+|+.+|.+++--.|.--.-++.+. ..-+|+
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~--~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT--YGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec--CCCeEE
Confidence 4478899999999999988776555554444444332 122345678899999998644443322244443 445689
Q ss_pred EEeccC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC---cEEEeccCCCc
Q 011995 257 YERLFH-GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF---SAKLSGYGCAG 332 (473)
Q Consensus 257 ~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~---~vkl~DFGla~ 332 (473)
|||+++ .++.+++...-.. .........++..|-..|.-||..+ |||+||..+||+|..++ .+.++|||++.
T Consensus 89 ME~~~g~~~vk~~i~~~~~~-~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMED-ESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EEeccchhHHHHHHHHHccC-cccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchh
Confidence 999976 3778887653222 2333344788889999999999999 99999999999996543 46899999985
Q ss_pred c
Q 011995 333 H 333 (473)
Q Consensus 333 ~ 333 (473)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 4
No 444
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.16 E-value=2e-09 Score=105.24 Aligned_cols=264 Identities=17% Similarity=0.203 Sum_probs=160.9
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhC-CCCCcccceee-----eecCCCCce
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGF-----HARDGSDQR 253 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~g~-----~~~~~~~~~ 253 (473)
++.||+|+-+.+|-.---.+. ..|+.. ........+ -++.|... .||-+-.-+.| +-.+.+...
T Consensus 16 gr~LgqGgea~ly~l~e~~d~------VAKIYh-~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 16 GRPLGQGGEADLYTLGEVRDQ------VAKIYH-APPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CccccCCccceeeecchhhch------hheeec-CCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 478999999999964211111 123332 222222222 22233333 56533321111 111111235
Q ss_pred EEEEEeccCCChhhhhh----cCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccC
Q 011995 254 MLIYERLFHGSLDRLIY----GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYG 329 (473)
Q Consensus 254 ~lV~E~~~~gsL~~~l~----~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFG 329 (473)
-++|..+.+..--..++ ++...+...|...+++++.++.+.+-||.+| .+-+|+.++|+|+++++.|.|.|-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEccc
Confidence 67777776643222222 2334566899999999999999999999999 8889999999999999999999876
Q ss_pred CCcccC-CCCccCcccccccCChhhhh-----cCCCCCcCCchHHHHHHHHHHcC-CCCCCCCChH------HHHhHhhh
Q 011995 330 CAGHIP-ETDISNSSVAAANLSVETLE-----RGLLTPKSNVWSFGIVLLELLTG-RKNLDSRHPK------EERNLVKW 396 (473)
Q Consensus 330 la~~~~-~~~~~~~~~t~~y~aPE~~~-----~~~~s~~sDvwSlGvvl~elltG-~~p~~~~~~~------~~~~~~~~ 396 (473)
...... .......++...|.+||.-. +-.-+...|.|.|||++++|+.| +.||.+.... .+..+...
T Consensus 163 sfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 163 SFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred ceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 544432 22345567889999999865 23346789999999999999876 9999764311 11111110
Q ss_pred cccccccccccccccccccCCCCCH-HHHHHHHHHHHHhccc--CCCCCCCHHHHHHHHHhhhcccC
Q 011995 397 SRPFLADDCRLSLIMDPQLKGRFPL-KAARTVADIALRCLQK--EPSERPTMRSIFEELDRQESRKS 460 (473)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~li~~cl~~--dP~~RPt~~eil~~L~~l~~~~~ 460 (473)
...+..+ ..... .+ ....+|. -...++..+..+|+.. ++.-|||++-++..|..++....
T Consensus 243 ~f~ya~~-~~~g~--~p-~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 243 RFAYASD-QRRGL--KP-PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred eeeechh-ccCCC--CC-CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 0000000 00000 00 1112232 3457788888999865 46689999999999998876543
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=2.9e-10 Score=100.09 Aligned_cols=137 Identities=14% Similarity=0.164 Sum_probs=95.2
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh--hhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E 258 (473)
..+++|+-+.+|.+.+-+.....|...-|-.+...-.+ ...+-.+|..+|.++.--.|.--+=|..+. +...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~--~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP--DNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC--CCCEEEEE
Confidence 46789999999999775544332222222222211111 124457899999988654444333233444 66789999
Q ss_pred eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
|++|-.|.+.+... ...++..+-.-+.-||..+ |||+||.++||++..++ +.++||||+.+
T Consensus 80 ~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99998888888432 3567777778889999999 99999999999998775 89999999864
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.14 E-value=6.6e-10 Score=103.54 Aligned_cols=145 Identities=15% Similarity=0.171 Sum_probs=104.0
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCC--CcccceeeeecCC-CCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP--NLCKLLGFHARDG-SDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp--nIv~l~g~~~~~~-~~~~~lV~ 257 (473)
+.|+.|.++.||++...+ ++.+.+|+............+..|++++..+.+. ++.+++.+..... .+..++||
T Consensus 4 ~~l~~G~~n~~~~v~~~~----g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG----GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEecC----CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 568999999999998654 1233344333222112456789999999999763 4566776654321 13568999
Q ss_pred EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------------------------------------
Q 011995 258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG------------------------------------ 301 (473)
Q Consensus 258 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~------------------------------------ 301 (473)
||++|.++.+.+.. ..++......++.+++.+|.+||+..
T Consensus 80 e~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (223)
T cd05154 80 ERVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP 155 (223)
T ss_pred EEeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence 99999888776521 34677788888888888888888521
Q ss_pred -----------------CCceeecCCCCCceeeCC--CCcEEEeccCCCcc
Q 011995 302 -----------------PFQAMYNEFSTANIQIDK--DFSAKLSGYGCAGH 333 (473)
Q Consensus 302 -----------------~~~ivHrDlkp~NILl~~--~~~vkl~DFGla~~ 333 (473)
+..++|+|+.+.|||++. ++.+.|+||+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999997753
No 447
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.12 E-value=1.2e-09 Score=99.18 Aligned_cols=141 Identities=13% Similarity=0.092 Sum_probs=94.2
Q ss_pred CcceeecCCceEEEEEECCCC---eeeeEEEEEEEecCC-----C----------------ChhhHhHH----HHHHHHH
Q 011995 180 DRCISEGLSSVMYRASFGDDA---STSKKFEATVTRLNP-----S----------------SQGVKEFI----NDVNTLA 231 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~---~~~~~~~~~~~~~~~-----~----------------~~~~~~~~----~Ei~~l~ 231 (473)
...||.|--+.||.|.-.++. .....+++|+.+... . ......+. +|+..|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 367999999999999744310 012344455543321 0 01122233 7999999
Q ss_pred hCCC--CCcccceeeeecCCCCceEEEEEeccCCChhh-hhhcCCCCCCCCHHHHHHHHHHHHHHHHHh-hhcCCCceee
Q 011995 232 SLQH--PNLCKLLGFHARDGSDQRMLIYERLFHGSLDR-LIYGRSDGPPIDWNTRVKIALCAAQGLTFL-HEEGPFQAMY 307 (473)
Q Consensus 232 ~l~H--pnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~L~yL-H~~~~~~ivH 307 (473)
++.. -++...+++ ...+|||||+.+..+.. .+. ...++......+..+++.+|..| |..+ |||
T Consensus 82 rl~~~Gv~vP~pi~~------~~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVH 148 (197)
T cd05146 82 RMQKAGIPCPEVVVL------KKHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKECN---LVH 148 (197)
T ss_pred HHHHcCCCCCeEEEe------cCCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHhCC---eec
Confidence 9843 455566643 23579999997654422 221 12345556778889999999999 7888 999
Q ss_pred cCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 308 NEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 308 rDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+||++.|||++ ++.+.|+|||.+...
T Consensus 149 GDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 149 ADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 99999999997 467999999987654
No 448
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.91 E-value=6.8e-08 Score=97.01 Aligned_cols=218 Identities=17% Similarity=0.236 Sum_probs=143.7
Q ss_pred CceEEEEEECCCCeeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhCCCCCcccceeeeecC--CCCceEEEEEeccC-C
Q 011995 188 SSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARD--GSDQRMLIYERLFH-G 263 (473)
Q Consensus 188 ~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~--~~~~~~lV~E~~~~-g 263 (473)
..+-|++...-+ +.. +..+|++.. .+.......-++.++++.|.|||++.+++... +...++|||+|+++ +
T Consensus 289 ~~Ttyk~~s~~D---G~~--YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 289 SITTYKATSNVD---GNA--YVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred cceeEeeeeccC---Cce--eeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 356788874333 333 333444211 11112233557899999999999999887632 23678999999876 5
Q ss_pred ChhhhhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 264 SLDRLIYGRS------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 264 sL~~~l~~~~------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
+|.++..... .+..+++..++.++.|+..||.++|+.| +.-+-|.+.+||++.+.+++|+..|+.
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccce
Confidence 7877765432 2234678899999999999999999999 888999999999999999999988877
Q ss_pred cccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCCCCChHHHHhHhhhccccccccccccccc
Q 011995 332 GHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIM 411 (473)
Q Consensus 332 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (473)
..+..+.. |.++. -.+-|.=-||.+++.|.||..--...+......+.
T Consensus 441 Dvl~~d~~------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~----------------- 488 (655)
T KOG3741|consen 441 DVLQEDPT------------EPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLT----------------- 488 (655)
T ss_pred eeecCCCC------------cchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHHHHH-----------------
Confidence 65544320 11111 23568889999999999996532111111110000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 412 DPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 412 ~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
.+....+.++++++......++.+ -+..+++..+
T Consensus 489 ------~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 489 ------RITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred ------HhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 113355667777777777777775 5666666544
No 449
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.82 E-value=8.2e-08 Score=88.80 Aligned_cols=141 Identities=14% Similarity=0.080 Sum_probs=95.6
Q ss_pred CceEEEEEECCCCeeeeEEEEEEEecCCC------ChhhHhHHHHHHHHHhCCCC--CcccceeeeecCC--CCceEEEE
Q 011995 188 SSVMYRASFGDDASTSKKFEATVTRLNPS------SQGVKEFINDVNTLASLQHP--NLCKLLGFHARDG--SDQRMLIY 257 (473)
Q Consensus 188 ~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Ei~~l~~l~Hp--nIv~l~g~~~~~~--~~~~~lV~ 257 (473)
-|.+|.+.........+.+.++....... .-......+|...+..+..- .+.+.+++..... ....+||+
T Consensus 17 R~~~~~~~~~~~~~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lit 96 (206)
T PF06293_consen 17 RRGGWFGVQRVVDLVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLIT 96 (206)
T ss_pred CceEEEEEEccccccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEE
Confidence 34566666544333444443432211111 12345678888888877433 3445555554421 13458999
Q ss_pred EeccCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCC---cEEEeccCCCcc
Q 011995 258 ERLFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDF---SAKLSGYGCAGH 333 (473)
Q Consensus 258 E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~---~vkl~DFGla~~ 333 (473)
|++++. +|.+++.... .++......++.+++..+.-||..| |+|+|+++.|||++.++ .+.++||+.++.
T Consensus 97 e~l~~~~~L~~~~~~~~---~~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 97 EALPGAQDLRDLLQQWE---QLDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred EeCCCcccHHHHHHhhc---ccchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999874 7999885421 2566778899999999999999999 99999999999999887 899999997764
Q ss_pred c
Q 011995 334 I 334 (473)
Q Consensus 334 ~ 334 (473)
.
T Consensus 171 ~ 171 (206)
T PF06293_consen 171 R 171 (206)
T ss_pred C
Confidence 3
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.81 E-value=1e-07 Score=91.33 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=81.0
Q ss_pred hHHHHHHHHHhCCCCCc--ccceeeeecCC---CCceEEEEEeccCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 011995 222 EFINDVNTLASLQHPNL--CKLLGFHARDG---SDQRMLIYERLFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLT 295 (473)
Q Consensus 222 ~~~~Ei~~l~~l~HpnI--v~l~g~~~~~~---~~~~~lV~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~ 295 (473)
.+.+|...+.++..-+| ...++|..... ...-+||+|++++. +|.+++.... ....+...+..++.+++..+.
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~ 152 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVR 152 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHH
Confidence 37789998888843333 34444543211 23578999999876 8988874321 234566778899999999999
Q ss_pred HhhhcCCCceeecCCCCCceeeCC-------CCcEEEeccCCCcc
Q 011995 296 FLHEEGPFQAMYNEFSTANIQIDK-------DFSAKLSGYGCAGH 333 (473)
Q Consensus 296 yLH~~~~~~ivHrDlkp~NILl~~-------~~~vkl~DFGla~~ 333 (473)
-||..| |+|+|+++.|||++. ++.+.|+||+.+..
T Consensus 153 ~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 153 DMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999999 999999999999975 46899999998753
No 451
>PRK09902 hypothetical protein; Provisional
Probab=98.76 E-value=1.6e-07 Score=85.79 Aligned_cols=154 Identities=11% Similarity=0.068 Sum_probs=102.8
Q ss_pred hcccccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC--cccceeeee---cC
Q 011995 174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN--LCKLLGFHA---RD 248 (473)
Q Consensus 174 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g~~~---~~ 248 (473)
...+...---|+||.+-|++..+.+...-.|.-.-.+.+.-.-.-....|.+|+..|.++..-+ +.+.. ++. ..
T Consensus 17 ~~~wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~ 95 (216)
T PRK09902 17 EGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIE 95 (216)
T ss_pred CCceecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccC
Confidence 3444444445789999999987765521111111001110001346788999999999985332 34444 322 12
Q ss_pred CCCceEEEEEeccC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCc--EEE
Q 011995 249 GSDQRMLIYERLFH-GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFS--AKL 325 (473)
Q Consensus 249 ~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~--vkl 325 (473)
..-.-+||+|-+++ -+|.+++... .-.+.+...+..++.+|+..|.-||+.+ +.|+|+.+.|||++.++. +++
T Consensus 96 ~~~rA~LVTe~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~l 171 (216)
T PRK09902 96 GEWRALLVTEDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGF 171 (216)
T ss_pred CceEEEEEEEeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEE
Confidence 22346899997754 4898888442 2235677888899999999999999999 999999999999986666 999
Q ss_pred eccCCCc
Q 011995 326 SGYGCAG 332 (473)
Q Consensus 326 ~DFGla~ 332 (473)
+||--++
T Consensus 172 IDlEk~r 178 (216)
T PRK09902 172 LDLEKSR 178 (216)
T ss_pred EEhhccc
Confidence 9997654
No 452
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.74 E-value=3.3e-09 Score=109.79 Aligned_cols=145 Identities=17% Similarity=0.222 Sum_probs=102.5
Q ss_pred HHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCC-C-----ccC-----cccccccCChhhhhcC
Q 011995 289 CAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET-D-----ISN-----SSVAAANLSVETLERG 357 (473)
Q Consensus 289 ~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~-~-----~~~-----~~~t~~y~aPE~~~~~ 357 (473)
+++.|+.|+|... .+||+.|.|++|.++.++..||+.|+.+...... + +.. ......|.|||++.+.
T Consensus 107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 3448999999987 6999999999999999999999999987654331 1 111 1223679999999988
Q ss_pred CCCCcCCchHHHHHHHHHH-cCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcc
Q 011995 358 LLTPKSNVWSFGIVLLELL-TGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQ 436 (473)
Q Consensus 358 ~~s~~sDvwSlGvvl~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~ 436 (473)
..+.++|+||+||++|-+. .|..-+..........+. .. .+..-...+..+++.++.+=+.+++.
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~-----~~---------~~~~~~~~~s~~~p~el~~~l~k~l~ 250 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS-----RN---------LLNAGAFGYSNNLPSELRESLKKLLN 250 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhh-----hc---------ccccccccccccCcHHHHHHHHHHhc
Confidence 8899999999999999998 455544433211111100 00 00011112245677889999999999
Q ss_pred cCCCCCCCHHHHH
Q 011995 437 KEPSERPTMRSIF 449 (473)
Q Consensus 437 ~dP~~RPt~~eil 449 (473)
.+...||++.+++
T Consensus 251 ~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 251 GDSAVRPTLDLLL 263 (700)
T ss_pred CCcccCcchhhhh
Confidence 9999999776654
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.59 E-value=2.5e-07 Score=86.52 Aligned_cols=135 Identities=17% Similarity=0.097 Sum_probs=93.8
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC---------------------ChhhHhHHHHHHHHHhCCC
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---------------------SQGVKEFINDVNTLASLQH 235 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~Ei~~l~~l~H 235 (473)
..++..||-|--+.||.|....+. ++++|+-+.... .-......+|.++|.+|.-
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~----~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~ 168 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGR----KVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYP 168 (304)
T ss_pred HhhccccccCccceEEEEECCCCC----EEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhh
Confidence 445689999999999999865433 333444333210 1112345789999999965
Q ss_pred C--CcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCC
Q 011995 236 P--NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTA 313 (473)
Q Consensus 236 p--nIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~ 313 (473)
. .+.+.+++ +..++||||++|-.|...- ++......++..|+.-+.-+-..| |||+|++.-
T Consensus 169 ~G~~VP~P~~~------nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSef 231 (304)
T COG0478 169 EGVKVPKPIAW------NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEF 231 (304)
T ss_pred cCCCCCCcccc------ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchh
Confidence 5 67777654 4567999999886664322 223444555666666666666777 999999999
Q ss_pred ceeeCCCCcEEEeccCCCc
Q 011995 314 NIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 314 NILl~~~~~vkl~DFGla~ 332 (473)
|||++++|.+.++||--+.
T Consensus 232 NIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 232 NILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred eEEEecCCCEEEEeCcccc
Confidence 9999999999999995443
No 454
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.53 E-value=2.4e-07 Score=83.86 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=65.0
Q ss_pred hHHHHHHHHHhCCCC--CcccceeeeecCCCCceEEEEEecc--CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH-
Q 011995 222 EFINDVNTLASLQHP--NLCKLLGFHARDGSDQRMLIYERLF--HGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF- 296 (473)
Q Consensus 222 ~~~~Ei~~l~~l~Hp--nIv~l~g~~~~~~~~~~~lV~E~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~y- 296 (473)
...+|.+.|.++..- ++.+++++. ..+|||||++ |..+..+.... ++......++.+++..+..
T Consensus 54 ~~~~E~~~L~~l~~~Gv~vP~p~~~~------~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~ 122 (188)
T PF01163_consen 54 WAKKEFRNLKRLYEAGVPVPKPYDYN------RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKM 122 (188)
T ss_dssp HHHHHHHHHHHCCCTT-SS--EEEEE------TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCccCCcEEEEe------CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHH
Confidence 457899999999765 456665442 2379999998 55554433211 1134456777888886655
Q ss_pred hhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 297 LHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 297 LH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+|..| |||+||.+.|||++++ .+.|+|||.+...
T Consensus 123 ~~~~g---ivHGDLs~~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 123 LHKAG---IVHGDLSEYNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp HHCTT---EEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred HHhcC---ceecCCChhhEEeecc-eEEEEecCcceec
Confidence 57888 9999999999999988 8999999987654
No 455
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.33 E-value=1.4e-07 Score=96.90 Aligned_cols=181 Identities=13% Similarity=0.074 Sum_probs=130.1
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC-cccceeeeecCCCCceEEEEEe
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN-LCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn-Iv~l~g~~~~~~~~~~~lV~E~ 259 (473)
+.+++|+++.+|+.+-. +.+.+..+++.. .....-++++|.+++||| .+..++-+ +.++..++++++
T Consensus 248 h~fvK~altknpKkRpt----aeklL~h~fvs~------~l~~rl~~eLLdK~n~P~~~v~~~~d~--~~E~~~~i~~~i 315 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPT----AEKLLQHPFVSQ------TLSRRLAIELLDKVNNPNPVVRYLEDY--DGEDYLWIPMRI 315 (829)
T ss_pred HHHHHHHhcCCCccCCC----hhhheeceeecc------chhhHHHHHHHHHccCCCCcccccccC--Ccccccchhhhh
Confidence 56789999999998622 222222333321 155667899999999999 55554433 334788999999
Q ss_pred ccCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCC
Q 011995 260 LFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETD 338 (473)
Q Consensus 260 ~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~ 338 (473)
+.++ +-.... ......+...+...+.+.-+.+++|||+.. -+|+| |||..+ +..+..||+....+....
T Consensus 316 ~s~~rs~~~~~--~~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~ 385 (829)
T KOG0576|consen 316 CSTGRSSALEM--TVSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM 385 (829)
T ss_pred hcCCccccccC--ChhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc
Confidence 9877 222111 112233455566677778889999999975 58998 887766 688999999887765543
Q ss_pred -ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCCCCCC
Q 011995 339 -ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLD 383 (473)
Q Consensus 339 -~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~~p~~ 383 (473)
.....+++.+++||+...+.+....|+|++|+-..+|--|.+|-.
T Consensus 386 ~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 345578899999999999999999999999998888888877654
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.30 E-value=1.1e-05 Score=75.62 Aligned_cols=138 Identities=12% Similarity=0.115 Sum_probs=77.1
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC--cccceeeeecCCCCceEEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN--LCKLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~g~~~~~~~~~~~lV~E 258 (473)
..||.|..+.||+.. ++. +.+++.. .......+.+|.+++..+..-. +.+.+++.... +...+|||
T Consensus 7 ~~i~~G~t~~~y~~~--~~~-----~VlR~~~---~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~--~~~glv~e 74 (226)
T TIGR02172 7 TQTGEGGNGESYTHK--TGK-----WMLKLYN---PGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDG--GRLGLIYE 74 (226)
T ss_pred eeecCCCCcceeEec--CCC-----EEEEeCC---CCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecC--Ceeeeeee
Confidence 678999999999842 221 1122222 2223455789999999986433 35666666444 55788999
Q ss_pred eccCCC-hhhhh---------------------hcCCCCCCCCHHHHHH-HHH----------HHHH-HHHHhhh-cCCC
Q 011995 259 RLFHGS-LDRLI---------------------YGRSDGPPIDWNTRVK-IAL----------CAAQ-GLTFLHE-EGPF 303 (473)
Q Consensus 259 ~~~~gs-L~~~l---------------------~~~~~~~~l~~~~~~~-i~~----------~i~~-~L~yLH~-~~~~ 303 (473)
+++|.. +...+ +.- .-.......... +.. .+.. ...+|.. ...+
T Consensus 75 ~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~ 153 (226)
T TIGR02172 75 LIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHST-KCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTS 153 (226)
T ss_pred ecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCC-CCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCC
Confidence 998863 22111 110 000111111000 000 0011 1122211 1123
Q ss_pred ceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 304 QAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 304 ~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.++|+|+.|.||++++++ +.|+||+.+.
T Consensus 154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 579999999999999888 9999998764
No 457
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.26 E-value=4.7e-06 Score=75.66 Aligned_cols=104 Identities=25% Similarity=0.128 Sum_probs=80.9
Q ss_pred HHHHHHHHhCCC-CCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 011995 224 INDVNTLASLQH-PNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGP 302 (473)
Q Consensus 224 ~~Ei~~l~~l~H-pnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~ 302 (473)
..|.-+|..+.+ +++.+++|+|- . ++|.||...+++......-......+|..+.+||.+++..+.+|+....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG-----~-~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~ 80 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG-----R-FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPL 80 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC-----C-EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 358888888866 69999999992 2 5789999877664321000112246899999999999999999988554
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
-.+.-.|++++|+-++++|.+|++|...+..
T Consensus 81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred CcEEEeecchHHeEEeCCCcEEEEechhcch
Confidence 4588899999999999999999999986543
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.16 E-value=1.4e-05 Score=73.40 Aligned_cols=68 Identities=15% Similarity=0.130 Sum_probs=53.7
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...+|||||++|..|.++.. ++. .++..+.+++.-||..| ++|+|..|.|++++.++ ++++||+.
T Consensus 116 ~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i~iID~~~ 180 (229)
T PF06176_consen 116 SSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-IRIIDTQG 180 (229)
T ss_pred eEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-EEEEECcc
Confidence 35678999999988876541 222 34556778899999999 99999999999999665 89999986
Q ss_pred Ccc
Q 011995 331 AGH 333 (473)
Q Consensus 331 a~~ 333 (473)
.+.
T Consensus 181 k~~ 183 (229)
T PF06176_consen 181 KRM 183 (229)
T ss_pred ccc
Confidence 643
No 459
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.14 E-value=3.3e-05 Score=73.23 Aligned_cols=140 Identities=16% Similarity=0.143 Sum_probs=77.8
Q ss_pred ceeecCC-ceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCcccceeeeecCCCCceEEEEEe
Q 011995 182 CISEGLS-SVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 182 ~lG~G~~-g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~g~~~~~~~~~~~lV~E~ 259 (473)
.|..|.+ ..||+....+. . +.++...... ...+.+|++++..+. +--+.+++++.... +..++|||+
T Consensus 5 ~~~~g~~~~~v~~~~~~~~-----~--~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~--~~~~lv~e~ 73 (244)
T cd05150 5 RVTEGQSGATVYRLDGKNP-----G--LYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDD--GRAWLLTSA 73 (244)
T ss_pred ecCCCCCcCeEEEEcCCCC-----c--EEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecC--CccEEEEEe
Confidence 3445555 77999864321 1 2222222211 346778999998883 33455677666543 567899999
Q ss_pred ccCCChhhhh-------------------hcCCC-CCCCCHH--HHHHHHH--------------------HHHHHHHHh
Q 011995 260 LFHGSLDRLI-------------------YGRSD-GPPIDWN--TRVKIAL--------------------CAAQGLTFL 297 (473)
Q Consensus 260 ~~~gsL~~~l-------------------~~~~~-~~~l~~~--~~~~i~~--------------------~i~~~L~yL 297 (473)
++|.+|.... +.... ...+... ....... .+...+..|
T Consensus 74 i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 153 (244)
T cd05150 74 VPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAEL 153 (244)
T ss_pred eCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHH
Confidence 9988776432 11100 1111100 0000000 011112222
Q ss_pred hh----cCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 298 HE----EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 298 H~----~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
-. ..++.++|+|+.+.|||+++++.+.|+||+.+.
T Consensus 154 ~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 154 EATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 11 123459999999999999998888999998764
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.07 E-value=5.2e-05 Score=70.81 Aligned_cols=144 Identities=19% Similarity=0.222 Sum_probs=79.6
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCC--CcccceeeeecCC-CCceEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP--NLCKLLGFHARDG-SDQRMLIY 257 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp--nIv~l~g~~~~~~-~~~~~lV~ 257 (473)
+.|+.|..+.||+....++ .+.+|+.. .. .....+.+|..+++.+... .+.+++.+..... ....+++|
T Consensus 3 ~~l~~G~~n~~~~v~~~~~-----~~vlK~~~--~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDDG-----RYVLKFYR--PP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEESSSSEEEEEEETTS-----EEEEEEES--SH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred ccCCCCCeeeEEEEEECCc-----EEEEEEeC--CC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 5789999999999986553 22233322 12 4567788999999888533 3456665443321 23468999
Q ss_pred EeccCCChhh----------------hh---hcC-CCCCCCCHHHH---------HHH------------HHHHHH-HHH
Q 011995 258 ERLFHGSLDR----------------LI---YGR-SDGPPIDWNTR---------VKI------------ALCAAQ-GLT 295 (473)
Q Consensus 258 E~~~~gsL~~----------------~l---~~~-~~~~~l~~~~~---------~~i------------~~~i~~-~L~ 295 (473)
+++++..+.. .+ +.. .....+.+... ... ...+.. .+.
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999987777 11 111 01111111110 000 111222 333
Q ss_pred Hhhhc----CCCceeecCCCCCceeeC-CCCcEEEeccCCCc
Q 011995 296 FLHEE----GPFQAMYNEFSTANIQID-KDFSAKLSGYGCAG 332 (473)
Q Consensus 296 yLH~~----~~~~ivHrDlkp~NILl~-~~~~vkl~DFGla~ 332 (473)
.++.. .+..++|+|+.+.|||++ .++.+-|+||+.+.
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 33321 334699999999999999 66666899998764
No 461
>PLN02876 acyl-CoA dehydrogenase
Probab=98.02 E-value=9.2e-05 Score=82.63 Aligned_cols=153 Identities=13% Similarity=0.114 Sum_probs=87.5
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC-CCCc--ccceeeeecCC-CCceEE
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNL--CKLLGFHARDG-SDQRML 255 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnI--v~l~g~~~~~~-~~~~~l 255 (473)
...|+.|.++.+|+..+.++... ..+.+++............+.+|+++|+.+. |.+| .+++.+|.+.. .+..|+
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~-~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSV-KRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcc-eeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 46788999999999876543211 2222222221111123356889999999995 6665 67777775431 135789
Q ss_pred EEEeccCCChhhh-----------------------hhcCCC--------CCCCCH--HHHHHHHH--------------
Q 011995 256 IYERLFHGSLDRL-----------------------IYGRSD--------GPPIDW--NTRVKIAL-------------- 288 (473)
Q Consensus 256 V~E~~~~gsL~~~-----------------------l~~~~~--------~~~l~~--~~~~~i~~-------------- 288 (473)
||||++|..+.+. ||.-.. +.+..+ ..+..|..
T Consensus 122 VME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~ 201 (822)
T PLN02876 122 IMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRN 201 (822)
T ss_pred EEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCC
Confidence 9999987643211 111100 001111 11211111
Q ss_pred -HHHHHHHHhhhcCC--------CceeecCCCCCceeeCCC-C-cEEEeccCCCcc
Q 011995 289 -CAAQGLTFLHEEGP--------FQAMYNEFSTANIQIDKD-F-SAKLSGYGCAGH 333 (473)
Q Consensus 289 -~i~~~L~yLH~~~~--------~~ivHrDlkp~NILl~~~-~-~vkl~DFGla~~ 333 (473)
.+...+.+|..+-+ +.+||+|+++.|||++.+ + .+-|.||.++..
T Consensus 202 ~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~ 257 (822)
T PLN02876 202 PKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL 257 (822)
T ss_pred hhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence 12334566654332 249999999999999853 3 357999998754
No 462
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.01 E-value=0.00012 Score=68.11 Aligned_cols=153 Identities=16% Similarity=0.147 Sum_probs=93.3
Q ss_pred CCHHHHHHHhcccccCcc---eeecCCceEEEEEECCCCeeeeEEEEEEEecCCC------------------ChhhH--
Q 011995 165 FPLDEVAAACHNFFSDRC---ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS------------------SQGVK-- 221 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~~~---lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-- 221 (473)
.+++.|........+... |..|--+.||+|.-.+ ...+++++.+.... ....+
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~----~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~l 110 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGD----GRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKL 110 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCC----CceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHH
Confidence 455666666666655554 4455666799986432 23334444433211 00111
Q ss_pred ---hHHHHHHHHHhCC--CCCcccceeeeecCCCCceEEEEEeccCCCh-hhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 011995 222 ---EFINDVNTLASLQ--HPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLT 295 (473)
Q Consensus 222 ---~~~~Ei~~l~~l~--HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL-~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~ 295 (473)
-..+|+..|.++. +-.+.+-+++. .-.|||||+....+ .-.| ....+.......+..++++.+.
T Consensus 111 v~~W~~kEf~NL~R~~eAGVrvP~Pi~~~------~nVLvMEfIg~~g~pAP~L----kDv~~e~~e~~~~~~~~v~~~~ 180 (268)
T COG1718 111 VFAWARKEFRNLKRAYEAGVRVPEPIAFR------NNVLVMEFIGDDGLPAPRL----KDVPLELEEAEGLYEDVVEYMR 180 (268)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceeec------CCeEEEEeccCCCCCCCCc----ccCCcCchhHHHHHHHHHHHHH
Confidence 1245777777763 44455555543 23699999854311 1111 1222333356777888888888
Q ss_pred Hhhh-cCCCceeecCCCCCceeeCCCCcEEEeccCCCcccC
Q 011995 296 FLHE-EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIP 335 (473)
Q Consensus 296 yLH~-~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~ 335 (473)
-|-. .+ +||+||+.-|||+. ++.+.|+|||-|....
T Consensus 181 ~l~~~a~---LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 181 RLYKEAG---LVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred HHHHhcC---cccccchhhheEEE-CCeEEEEECccccccC
Confidence 8877 55 99999999999999 8899999999776543
No 463
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.00 E-value=4.7e-05 Score=67.05 Aligned_cols=129 Identities=16% Similarity=0.183 Sum_probs=85.2
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEe
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~ 259 (473)
.+.|++|++|.||+|.+.+. .+++++-+ .+.....+..|.++|..+.--++.+=+-++ +.-++.|||
T Consensus 27 ~~~L~KG~~s~Vyl~~~~~~-----~~a~Kvrr---~ds~r~~l~kEakiLeil~g~~~~p~vy~y-----g~~~i~me~ 93 (201)
T COG2112 27 EKELAKGTTSVVYLGEWRGG-----EVALKVRR---RDSPRRNLEKEAKILEILAGEGVTPEVYFY-----GEDFIRMEY 93 (201)
T ss_pred hhhhhcccccEEEEeeccCc-----eEEEEEec---CCcchhhHHHHHHHHHHhhhcCCCceEEEe-----chhhhhhhh
Confidence 37899999999999988765 23345444 334467888999999999877665433222 223466999
Q ss_pred ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCC-CCceeeCCCCcEEEeccCCCccc
Q 011995 260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFS-TANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk-p~NILl~~~~~vkl~DFGla~~~ 334 (473)
+.|-.|.++-... +-.+ ...++..---|-..| |-|+.|. |...+|-.++.+.|+||..|++-
T Consensus 94 i~G~~L~~~~~~~------~rk~----l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 94 IDGRPLGKLEIGG------DRKH----LLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred hcCcchhhhhhcc------cHHH----HHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 9888887765211 2223 334444444455666 8888886 44444444558999999988743
No 464
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.98 E-value=4.1e-05 Score=79.71 Aligned_cols=79 Identities=20% Similarity=0.210 Sum_probs=55.9
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
....|+|||++|..+.+...... ..++...+.....++ -+..+-..| ++|.|..|.||+++.+|.+.+.|||+
T Consensus 239 ~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~k~ia~~~~~~--f~~q~~~dg---ffHaDpHpGNi~v~~~g~i~~lDfGi 311 (517)
T COG0661 239 TRRVLTMEWIDGIKISDIAALKS--AGIDRKELAELLVRA--FLRQLLRDG---FFHADPHPGNILVRSDGRIVLLDFGI 311 (517)
T ss_pred CCcEEEEEeeCCEecccHHHHHh--cCCCHHHHHHHHHHH--HHHHHHhcC---ccccCCCccceEEecCCcEEEEcCcc
Confidence 56789999999999988853222 234533333332222 233333456 99999999999999999999999999
Q ss_pred CcccCC
Q 011995 331 AGHIPE 336 (473)
Q Consensus 331 a~~~~~ 336 (473)
...+..
T Consensus 312 ~g~l~~ 317 (517)
T COG0661 312 VGRLDP 317 (517)
T ss_pred eecCCH
Confidence 877653
No 465
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.96 E-value=0.0002 Score=65.51 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=86.8
Q ss_pred cCcceeecCCceEEEEEECCCCeeeeEEEEEEEecCC---------------CChhhHhHHHHHHHHHhCC------CCC
Q 011995 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---------------SSQGVKEFINDVNTLASLQ------HPN 237 (473)
Q Consensus 179 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Ei~~l~~l~------Hpn 237 (473)
....||+|+.-.||.-- ++... .+||.+... ......+..+|+.-...+. +.+
T Consensus 5 ~~~~i~~G~~R~cy~HP--~dp~~----cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~ 78 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQHP--DDPNL----CIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSH 78 (199)
T ss_pred CCcccccCCCceEEECC--CCCCe----EEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccc
Confidence 34789999999999753 22211 144433222 0123466677776666555 788
Q ss_pred cccceeeeecCCCCceEEEEEeccC------CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCC
Q 011995 238 LCKLLGFHARDGSDQRMLIYERLFH------GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFS 311 (473)
Q Consensus 238 Iv~l~g~~~~~~~~~~~lV~E~~~~------gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk 311 (473)
|.+++|+..++ ....+|+|.+.+ -+|.+++.. ..++. ..... +-.-..||-+++ |+.+|++
T Consensus 79 i~r~~G~veT~--~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~~~~~---L~~f~~~l~~~~---Iv~~dl~ 145 (199)
T PF10707_consen 79 IPRFYGFVETN--LGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-ELRQA---LDEFKRYLLDHH---IVIRDLN 145 (199)
T ss_pred cccEeEEEecC--CceEEEEEEEECCCCCcCccHHHHHHc----CCccH-HHHHH---HHHHHHHHHHcC---CeecCCC
Confidence 99999999887 677899998633 257777732 23554 33333 334457777887 9999999
Q ss_pred CCceeeCCC--C--cEEEec-cCCCc
Q 011995 312 TANIQIDKD--F--SAKLSG-YGCAG 332 (473)
Q Consensus 312 p~NILl~~~--~--~vkl~D-FGla~ 332 (473)
|.||++..+ + .+.|+| ||...
T Consensus 146 ~~NIv~~~~~~~~~~lvlIDG~G~~~ 171 (199)
T PF10707_consen 146 PHNIVVQRRDSGEFRLVLIDGLGEKE 171 (199)
T ss_pred cccEEEEecCCCceEEEEEeCCCCcc
Confidence 999999533 2 477777 55443
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.93 E-value=0.00012 Score=69.08 Aligned_cols=32 Identities=16% Similarity=0.382 Sum_probs=26.6
Q ss_pred CCceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 302 PFQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 302 ~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
++.++|+|+.+.|||++.++..-|+||+.+..
T Consensus 163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred CceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 34589999999999999776677999997643
No 467
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.87 E-value=3.3e-05 Score=84.96 Aligned_cols=198 Identities=17% Similarity=0.217 Sum_probs=136.4
Q ss_pred HHHHHHHHHhCCCCCcccceeeeecCCCCc--eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 011995 223 FINDVNTLASLQHPNLCKLLGFHARDGSDQ--RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300 (473)
Q Consensus 223 ~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~--~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~ 300 (473)
..-|+..+..+.|+|++.+++|....-... ..+.-+++..-++...+. .-..++..+...+..++..||.|+|+.
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q---~v~~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ---SVGSIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh---hccccCHHHHHHHHHHHhhhHHHHHHh
Confidence 345677788889999999998876542111 223347777778877773 345688899999999999999999998
Q ss_pred CCCceeecCCCCC---ceeeCCCCcEEEe--ccCCCcccCCCCccCc-ccccccCChhhhhcCCCCC--cCCchHHHHHH
Q 011995 301 GPFQAMYNEFSTA---NIQIDKDFSAKLS--GYGCAGHIPETDISNS-SVAAANLSVETLERGLLTP--KSNVWSFGIVL 372 (473)
Q Consensus 301 ~~~~ivHrDlkp~---NILl~~~~~vkl~--DFGla~~~~~~~~~~~-~~t~~y~aPE~~~~~~~s~--~sDvwSlGvvl 372 (473)
. ..|.-+..+ +...+..+.+.++ ||+............. ..+..+.++|......+.. ..|+|.+|..+
T Consensus 306 ~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~ 382 (1351)
T KOG1035|consen 306 S---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL 382 (1351)
T ss_pred c---cceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHH
Confidence 6 666655555 4445666777777 8988877654433322 3445677888776555444 47999999999
Q ss_pred HHHHcCCCCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 011995 373 LELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSIFEEL 452 (473)
Q Consensus 373 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 452 (473)
..+..|..+-....... .++ +........+...+|+..++++|+++.+++...
T Consensus 383 ~~~~~~~~i~~~~~~~~-------------------~~l--------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 383 LQLSQGEDISEKSAVPV-------------------SLL--------DVLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred hhhhhcCcccccccchh-------------------hhh--------ccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 99998865432211000 000 111112567889999999999999999998765
Q ss_pred H
Q 011995 453 D 453 (473)
Q Consensus 453 ~ 453 (473)
-
T Consensus 436 f 436 (1351)
T KOG1035|consen 436 F 436 (1351)
T ss_pred h
Confidence 4
No 468
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.87 E-value=0.00012 Score=76.17 Aligned_cols=141 Identities=15% Similarity=0.061 Sum_probs=85.6
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCCh------------------------------hhH------hHH
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ------------------------------GVK------EFI 224 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~------~~~ 224 (473)
..||..+.|.||+|++.++. .+++||-+-.-... ..+ .|.
T Consensus 167 ~piaaASlaQVhrA~L~~G~----~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~ 242 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGE----DVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFT 242 (538)
T ss_pred chhhhcchhheEEEEecCCC----EEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchH
Confidence 68999999999999998843 34455433221110 011 133
Q ss_pred HHHHHHHhC----CCCC------cccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 011995 225 NDVNTLASL----QHPN------LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGL 294 (473)
Q Consensus 225 ~Ei~~l~~l----~Hpn------Iv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L 294 (473)
+|.+...++ .|-+ |.+++-.+ .....|+||||+|.-+.|.-.-. ...++...+..-+.++..
T Consensus 243 ~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~----st~RVLtME~~~G~~i~Dl~~i~--~~gi~~~~i~~~l~~~~~-- 314 (538)
T KOG1235|consen 243 KEAKNAERFRENFKDFSLLTYVLVPKVYWDL----STKRVLTMEYVDGIKINDLDAID--KRGISPHDILNKLVEAYL-- 314 (538)
T ss_pred HHHHhHHHHHHHHHhcccccceeCCeehhhc----CcceEEEEEecCCccCCCHHHHH--HcCCCHHHHHHHHHHHHH--
Confidence 344333333 3545 33343222 15689999999999887664322 223555544444443322
Q ss_pred HHhhhcCCCceeecCCCCCceeeC----CCCcEEEeccCCCcccCC
Q 011995 295 TFLHEEGPFQAMYNEFSTANIQID----KDFSAKLSGYGCAGHIPE 336 (473)
Q Consensus 295 ~yLH~~~~~~ivHrDlkp~NILl~----~~~~vkl~DFGla~~~~~ 336 (473)
.-+-..| ++|+|=.|.||++. .++.+.+.|||+...+..
T Consensus 315 ~qIf~~G---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 315 EQIFKTG---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHHhcC---CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 2223345 99999999999998 367899999999876643
No 469
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.86 E-value=0.00034 Score=63.59 Aligned_cols=128 Identities=13% Similarity=0.226 Sum_probs=88.0
Q ss_pred cccccCcceeecCC-ceEEEEEECCCCeeeeEEEEEEEec---CCC----------C-------hhhHhHHHHHHHHHhC
Q 011995 175 HNFFSDRCISEGLS-SVMYRASFGDDASTSKKFEATVTRL---NPS----------S-------QGVKEFINDVNTLASL 233 (473)
Q Consensus 175 ~~f~~~~~lG~G~~-g~Vy~~~~~~~~~~~~~~~~~~~~~---~~~----------~-------~~~~~~~~Ei~~l~~l 233 (473)
.+++..+.||.|.- |.||++...+. .+++|+.+. ... . ....-|..|.....+|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~-----~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRL 111 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGR-----IYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRL 111 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCe-----EEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHH
Confidence 67888899999999 99999987665 444555111 100 0 1123577888877776
Q ss_pred ---CCCCc--ccceeeeecCC----------------CCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHH
Q 011995 234 ---QHPNL--CKLLGFHARDG----------------SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQ 292 (473)
Q Consensus 234 ---~HpnI--v~l~g~~~~~~----------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~ 292 (473)
.+.++ |+++||..-.. .....||.||++... .+ ...-+.+|.+
T Consensus 112 ke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~----~~~~~~~~~~ 175 (207)
T PF13095_consen 112 KEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PL----QIRDIPQMLR 175 (207)
T ss_pred HhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------cc----chhHHHHHHH
Confidence 45566 99999974331 123467888765532 11 2234567788
Q ss_pred HHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCCC
Q 011995 293 GLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCA 331 (473)
Q Consensus 293 ~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla 331 (473)
-|..+|..+ |+-+|+++.|.. .-||+|||.+
T Consensus 176 dl~~~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 176 DLKILHKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHHHCC---eeeccCcccccc-----CCEEEecccC
Confidence 899999999 999999999987 4589999864
No 470
>PRK10593 hypothetical protein; Provisional
Probab=97.71 E-value=0.00054 Score=67.06 Aligned_cols=78 Identities=18% Similarity=0.180 Sum_probs=52.4
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCC---CCcccceeeeecCC-CCceEE
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH---PNLCKLLGFHARDG-SDQRML 255 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~H---pnIv~l~g~~~~~~-~~~~~l 255 (473)
...||.|..+.||+....++.. .+|+.+ .......+.+|.+.|+.+.- -.+.++++++.... .+..+|
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~~-----~~k~~~---~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGNP-----MPLMAR---SFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred eeecCCccceeEEEEEcCCCCE-----EEEEec---ccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence 3679999999999986544431 123221 11123578899999998843 35778888775421 255799
Q ss_pred EEEeccCCCh
Q 011995 256 IYERLFHGSL 265 (473)
Q Consensus 256 V~E~~~~gsL 265 (473)
|||+++++++
T Consensus 91 VmE~i~G~~~ 100 (297)
T PRK10593 91 LLERLRGVSV 100 (297)
T ss_pred EEeccCCEec
Confidence 9999988765
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.64 E-value=0.00065 Score=63.91 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=26.2
Q ss_pred CceeecCCCCCceeeCC-CCcEEEeccCCCc
Q 011995 303 FQAMYNEFSTANIQIDK-DFSAKLSGYGCAG 332 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~-~~~vkl~DFGla~ 332 (473)
..++|+|+.+.|||++. ++.+.|+||-.+.
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 45999999999999998 5789999997664
No 472
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.47 E-value=0.0016 Score=63.50 Aligned_cols=155 Identities=14% Similarity=0.080 Sum_probs=84.6
Q ss_pred HHHHHhccccc-----CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC--cccc
Q 011995 169 EVAAACHNFFS-----DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN--LCKL 241 (473)
Q Consensus 169 el~~~~~~f~~-----~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn--Iv~l 241 (473)
++....+.|.. .+.|..|....+|+....++. +.+++.. . .....+..|++++..+.+.+ +.++
T Consensus 3 ~l~~~l~~y~~~~~~~i~~i~~G~~n~~y~v~~~~~~-----~vLr~~~--~--~~~~~~~~e~~~l~~L~~~g~~vp~~ 73 (296)
T cd05153 3 ELASFLADYDLGELLSFEGISAGIENTNYFVTTDSGR-----YVLTLFE--K--VSAEELPFFLALLDHLAERGLPVPRP 73 (296)
T ss_pred HHHHHHHHcCCCchhheecccCccccceEEEEeCCCc-----EEEEEcC--C--CChHhccHHHHHHHHHHHCCCCCCcc
Confidence 44454455543 356777777899998654332 2233322 1 23456777888888874332 4444
Q ss_pred eeee----ecCCCCceEEEEEeccCCChhh----h----------hhcCCC--------CCCCCHHHHH----------H
Q 011995 242 LGFH----ARDGSDQRMLIYERLFHGSLDR----L----------IYGRSD--------GPPIDWNTRV----------K 285 (473)
Q Consensus 242 ~g~~----~~~~~~~~~lV~E~~~~gsL~~----~----------l~~~~~--------~~~l~~~~~~----------~ 285 (473)
+... .....+..++|++|++|..+.. . ++.... .....|.... .
T Consensus 74 i~~~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 153 (296)
T cd05153 74 IADRDGEYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAE 153 (296)
T ss_pred ccCCCCcEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHH
Confidence 3311 0011245689999998876532 0 111000 0111222211 0
Q ss_pred HHHHHHHHHHHhhhc----CCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 286 IALCAAQGLTFLHEE----GPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 286 i~~~i~~~L~yLH~~----~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
....+...+.++... -+..++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 154 DRALLADELARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred HHHHHHHHHHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 111223344554431 12359999999999999998778899998764
No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.44 E-value=0.00098 Score=63.70 Aligned_cols=137 Identities=16% Similarity=0.173 Sum_probs=72.4
Q ss_pred eeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhh-HhHHHHHHHHHhCCCCCcc-cceeeeecCCCCceEEEEEec
Q 011995 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQHPNLC-KLLGFHARDGSDQRMLIYERL 260 (473)
Q Consensus 183 lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Ei~~l~~l~HpnIv-~l~g~~~~~~~~~~~lV~E~~ 260 (473)
+..|-.+.+|+....+ +.+.+++ ........ -...+|..+++.+....++ +++++. . -++||||+
T Consensus 4 ~~~G~tn~~y~~~~~~-----~~~vlR~--~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~----~~~v~e~i 70 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPG-----ISFVWRP--QSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E----HWLLVEWL 70 (256)
T ss_pred CCCcCcCCeEEEEeCC-----ccEEEee--CCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C----CEEEEEec
Confidence 4567778899886322 2222222 11111111 2457899999998654443 444332 1 26899999
Q ss_pred cCCChhhh-----------------hhcCC-CCCCCCHHHH-HHHHHHH---------HHHHHHhhhc-----CCCceee
Q 011995 261 FHGSLDRL-----------------IYGRS-DGPPIDWNTR-VKIALCA---------AQGLTFLHEE-----GPFQAMY 307 (473)
Q Consensus 261 ~~gsL~~~-----------------l~~~~-~~~~l~~~~~-~~i~~~i---------~~~L~yLH~~-----~~~~ivH 307 (473)
+|..+... ||... ...+++.... ..+..++ ...+..+-.. .++.++|
T Consensus 71 ~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H 150 (256)
T TIGR02721 71 EGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLH 150 (256)
T ss_pred cCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeec
Confidence 88765421 11111 1122222211 1111111 1112222111 1235899
Q ss_pred cCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 308 NEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 308 rDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
+|+.+.||++++++ +.|+||..+..
T Consensus 151 ~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 151 MDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred CCCCcCcEEEeCCC-CEEEeccccCc
Confidence 99999999999887 78999987653
No 474
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.30 E-value=0.008 Score=59.09 Aligned_cols=160 Identities=13% Similarity=0.090 Sum_probs=86.6
Q ss_pred CCHHHHHHHhcccccC-----cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC--
Q 011995 165 FPLDEVAAACHNFFSD-----RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN-- 237 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~-----~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn-- 237 (473)
.+.++|......|... +.++.|....+|+....++. +.+++.... .....+..|++++..|....
T Consensus 7 ~~~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~~~-----~vLK~~~~~---~~~~~i~~e~~~l~~L~~~g~p 78 (307)
T TIGR00938 7 VSDEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDVGR-----YILTLYEKR---VKAEELPFFLALTTHLAARGLP 78 (307)
T ss_pred CCHHHHHHHHHhcCCCCceeccccCCccccceEEEEeCCCc-----EEEEEecCC---CCHHHHHHHHHHHHHHHHCCCC
Confidence 4557777776667543 45667777889998643332 223332211 12345566777777774222
Q ss_pred cccceeee----ecCCCCceEEEEEeccCCChhh--------------hhhcCCCC--C-------CCCHHHHH------
Q 011995 238 LCKLLGFH----ARDGSDQRMLIYERLFHGSLDR--------------LIYGRSDG--P-------PIDWNTRV------ 284 (473)
Q Consensus 238 Iv~l~g~~----~~~~~~~~~lV~E~~~~gsL~~--------------~l~~~~~~--~-------~l~~~~~~------ 284 (473)
+.+++... .....+..++|++|++|..+.. .++....+ . .-.|....
T Consensus 79 vp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 158 (307)
T TIGR00938 79 VPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEA 158 (307)
T ss_pred CCccccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhc
Confidence 34443311 1111256789999998855421 01111110 0 01121110
Q ss_pred ------HHHHHHHHHHHHhhh----cCCCceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 285 ------KIALCAAQGLTFLHE----EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 285 ------~i~~~i~~~L~yLH~----~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
.....+...++++.. ..+..++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 159 ~~~l~~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 159 APQLEAHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred ccccCHHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 011123344555542 223469999999999999998877899998764
No 475
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.26 E-value=3.7e-05 Score=86.37 Aligned_cols=160 Identities=10% Similarity=-0.010 Sum_probs=115.9
Q ss_pred HHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 011995 223 FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEG 301 (473)
Q Consensus 223 ~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~ 301 (473)
...|...++...|+++.....-.........+.+++|+.+|.+.+.|.+.. ..+.++..-+.....+.+....-+|...
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 344555666678998887765444444567789999999999999986532 2334444444444444355555555433
Q ss_pred C--CceeecCCCCCceeeCCCCcEEEeccCCCcccCCC-C-ccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHc
Q 011995 302 P--FQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPET-D-ISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLT 377 (473)
Q Consensus 302 ~--~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~-~-~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~ellt 377 (473)
. -..+|+++|+.|.+|..+..+|++++|+.+..... . .....+++.|+.++..+.-.++.++|+|..|+.+|++.-
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~ 1435 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSD 1435 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Confidence 1 13689999999999999999999999999843322 1 233466778999999988889999999999999999998
Q ss_pred CCCCC
Q 011995 378 GRKNL 382 (473)
Q Consensus 378 G~~p~ 382 (473)
|..+|
T Consensus 1436 ~n~~f 1440 (2724)
T KOG1826|consen 1436 GNAYF 1440 (2724)
T ss_pred ccHHH
Confidence 88776
No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.22 E-value=0.0033 Score=61.61 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=26.9
Q ss_pred CCceeecCCCCCceeeCCC----CcEEEeccCCCc
Q 011995 302 PFQAMYNEFSTANIQIDKD----FSAKLSGYGCAG 332 (473)
Q Consensus 302 ~~~ivHrDlkp~NILl~~~----~~vkl~DFGla~ 332 (473)
+..++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 4469999999999999985 889999998764
No 477
>PRK05231 homoserine kinase; Provisional
Probab=97.06 E-value=0.018 Score=56.82 Aligned_cols=30 Identities=10% Similarity=0.065 Sum_probs=25.8
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
..+||+|+.+.|||++.+...-|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 359999999999999977666899999764
No 478
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.99 E-value=0.0092 Score=60.50 Aligned_cols=77 Identities=14% Similarity=0.164 Sum_probs=47.5
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEE----ecCCC--ChhhHhHHHHHHHHHhCC---CCCcccceeeeecCCCC
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVT----RLNPS--SQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDGSD 251 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~ 251 (473)
+.||.|.+..||++...++. +.+.+|.- +.... .....++..|.+.|..+. -.++.+++.+. . +
T Consensus 32 ~elggGn~N~VyrV~~~~g~---~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~--~ 104 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGG---KSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--E--E 104 (401)
T ss_pred eEcCCCceEEEEEEEeCCCC---eEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--C--C
Confidence 57899999999999876542 11112221 11101 123456777888888762 24566776542 2 5
Q ss_pred ceEEEEEeccCCC
Q 011995 252 QRMLIYERLFHGS 264 (473)
Q Consensus 252 ~~~lV~E~~~~gs 264 (473)
..++||||+++..
T Consensus 105 ~~~lVME~L~~~~ 117 (401)
T PRK09550 105 LAVTVMEDLSDHK 117 (401)
T ss_pred CCEEEEecCCCcc
Confidence 5789999997643
No 479
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.77 E-value=0.024 Score=54.77 Aligned_cols=31 Identities=19% Similarity=0.183 Sum_probs=25.6
Q ss_pred CceeecCCCCCceeeCCCCc-EEEeccCCCcc
Q 011995 303 FQAMYNEFSTANIQIDKDFS-AKLSGYGCAGH 333 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~-vkl~DFGla~~ 333 (473)
+.++|+|+.+.|||++.++. .-|+||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 35899999999999997554 56999998754
No 480
>PLN02236 choline kinase
Probab=96.69 E-value=0.023 Score=56.86 Aligned_cols=144 Identities=13% Similarity=0.197 Sum_probs=77.0
Q ss_pred cceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcc-cceeeeecCCCCceEEEEE
Q 011995 181 RCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC-KLLGFHARDGSDQRMLIYE 258 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv-~l~g~~~~~~~~~~~lV~E 258 (473)
..|-.|-...+|+..+.++.. ..+.+.+++.. ......-.-.+|+.++..+..-++. ++++++. . . .|+|
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g--~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~-~---g--~v~e 113 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYG--EGVELFFDRDDEIRTFECMSRHGQGPRLLGRFP-N---G--RVEE 113 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEcc--CCCCeeechHHHHHHHHHHHHcCCCCceEEEEC-C---c--eEEE
Confidence 345457778899987643221 12333333222 1222222336799999988544444 5555542 2 1 5899
Q ss_pred eccCCChhhh-----------------hhcCC-CCC--CCCHHHHHHHHHHH-----------------HHHHHHh----
Q 011995 259 RLFHGSLDRL-----------------IYGRS-DGP--PIDWNTRVKIALCA-----------------AQGLTFL---- 297 (473)
Q Consensus 259 ~~~~gsL~~~-----------------l~~~~-~~~--~l~~~~~~~i~~~i-----------------~~~L~yL---- 297 (473)
|+++.+|... +|... ... ...|..+..+..++ ...+..|
T Consensus 114 fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~ 193 (344)
T PLN02236 114 FIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKEL 193 (344)
T ss_pred eeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHh
Confidence 9987676421 11111 011 12233333333222 1111122
Q ss_pred hh-cCCCceeecCCCCCceeeCC-CCcEEEeccCCCc
Q 011995 298 HE-EGPFQAMYNEFSTANIQIDK-DFSAKLSGYGCAG 332 (473)
Q Consensus 298 H~-~~~~~ivHrDlkp~NILl~~-~~~vkl~DFGla~ 332 (473)
.. ..+..++|+|+++.|||+++ ++.+.|+||..+.
T Consensus 194 ~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 194 SGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred cccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 21 12335899999999999986 4789999998765
No 481
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.61 E-value=0.029 Score=55.01 Aligned_cols=32 Identities=13% Similarity=0.081 Sum_probs=28.5
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCccc
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAGHI 334 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~ 334 (473)
+.++|+|+.+.||+++.++-+=|.||+++..-
T Consensus 198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred ceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 47999999999999999888999999988653
No 482
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.56 E-value=0.0025 Score=65.02 Aligned_cols=166 Identities=24% Similarity=0.361 Sum_probs=93.6
Q ss_pred hHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 011995 220 VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299 (473)
Q Consensus 220 ~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~ 299 (473)
..++......++.+.|+|+...+.+..... ....+|+|++ +.||++.+..+. +-.. +++ .
T Consensus 26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~-~r~IVV~e~~-~~Sled~~~~~~----l~~~----------s~~----~ 85 (725)
T KOG1093|consen 26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKH-ERVIVVMEHY-TMSLEDILKTGN----LKDE----------SLL----A 85 (725)
T ss_pred HHHHhhhhHHHHhhcCccceeeEeeecCcc-ceEEEEehhh-ccchHHHHHhcc----cchh----------hhc----c
Confidence 356777888999999999999998765543 5588899998 669999884321 1100 111 1
Q ss_pred cCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCC
Q 011995 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGR 379 (473)
Q Consensus 300 ~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~ 379 (473)
++ +.| -|++ +++| .+.... |- ...+++||||+|.++.|+.-|.
T Consensus 86 ~~---~~~-----~~~~-------~~td----~~~t~~-------------~~-----~~~pKsdVwsl~~i~~el~L~~ 128 (725)
T KOG1093|consen 86 HG---VLH-----LNII-------YITD----HFLTKY-------------PS-----PIGPKSDVWSLGFIILELYLGI 128 (725)
T ss_pred cc---cce-----ehhh-------hccc----cccccC-------------CC-----CCCcchhhhhHHHHHHHHHHhh
Confidence 11 222 1222 2222 000000 00 0124999999999999999998
Q ss_pred CCCCCCChHHHHhHhhhcccccccccccccccccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 011995 380 KNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPLKAARTVADIALRCLQKEPSERPTMRSI 448 (473)
Q Consensus 380 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 448 (473)
.-+......+....+. .+..++.....+.-.. .+...+...+.++...|+-..|..||...++
T Consensus 129 ~l~~~~~~s~~l~~i~---k~~~~d~~~~~~a~e~---~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~ 191 (725)
T KOG1093|consen 129 SLEAELTESEYLEILL---KYYTDDQELLSTAMEH---LIQLLADKKRLPLLKKCLWLEPIIRPLPMEL 191 (725)
T ss_pred HHHHHHHHHHHHHHHH---HhccCchhHHHHHHHH---HHHHhhhHhHHHHhccCCccccccccchhHH
Confidence 7665443333222221 1111111111000000 1233556677889999999999988765443
No 483
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.32 E-value=0.027 Score=56.08 Aligned_cols=78 Identities=12% Similarity=0.149 Sum_probs=43.3
Q ss_pred ceeecCCceEEEEEECCCC-eeeeEEEEEEEec-C-CCChhhHhHHHHHHHHHhCC--CC-CcccceeeeecCCCCceEE
Q 011995 182 CISEGLSSVMYRASFGDDA-STSKKFEATVTRL-N-PSSQGVKEFINDVNTLASLQ--HP-NLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 182 ~lG~G~~g~Vy~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~Ei~~l~~l~--Hp-nIv~l~g~~~~~~~~~~~l 255 (473)
.||.|....||++...++. ....+.+....+. . .-.-...+..-|.+.|+... -| .+.++|.| +. +...+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~--e~~~~ 77 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DT--EMAVT 77 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--cc--cccee
Confidence 5799999999999864331 2222222222222 1 11233455566777777653 34 45556433 33 55679
Q ss_pred EEEeccCC
Q 011995 256 IYERLFHG 263 (473)
Q Consensus 256 V~E~~~~g 263 (473)
|||+++..
T Consensus 78 vMEdL~~~ 85 (370)
T TIGR01767 78 VMEDLSHH 85 (370)
T ss_pred hHhhCccc
Confidence 99998553
No 484
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.14 E-value=0.01 Score=57.49 Aligned_cols=131 Identities=15% Similarity=0.064 Sum_probs=85.9
Q ss_pred cccCcceeecCCceEEEEEECCCCeeeeEEEEEEEecC-----------------CCChh----hHhHHHHHHHHHhCC-
Q 011995 177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-----------------PSSQG----VKEFINDVNTLASLQ- 234 (473)
Q Consensus 177 f~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~----~~~~~~Ei~~l~~l~- 234 (473)
+..++.||-|--+-||.+...++... ++|+-++. .+..| +-...+|+..|+.|.
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~----~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e 169 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPL----ILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE 169 (465)
T ss_pred hhhccccccccccceEEEecCCCCch----hHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence 56789999999999999986544321 12222211 01111 123467888888884
Q ss_pred CC-CcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCC
Q 011995 235 HP-NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTA 313 (473)
Q Consensus 235 Hp-nIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~ 313 (473)
|. -+.+.+++ +..++|||++.+-.|...-+- .+..+ +...+..-|--|-.+| +||+|+.-=
T Consensus 170 ~gfpVPkpiD~------~RH~Vvmelv~g~Pl~~v~~v------~d~~~---ly~~lm~~Iv~la~~G---lIHgDFNEF 231 (465)
T KOG2268|consen 170 RGFPVPKPIDH------NRHCVVMELVDGYPLRQVRHV------EDPPT---LYDDLMGLIVRLANHG---LIHGDFNEF 231 (465)
T ss_pred cCCCCCCcccc------cceeeHHHhhcccceeeeeec------CChHH---HHHHHHHHHHHHHHcC---ceecccchh
Confidence 32 24444443 456899999988877654311 12233 3334444566677888 999999999
Q ss_pred ceeeCCCCcEEEeccC
Q 011995 314 NIQIDKDFSAKLSGYG 329 (473)
Q Consensus 314 NILl~~~~~vkl~DFG 329 (473)
||++++++.++++||-
T Consensus 232 Nimv~dd~~i~vIDFP 247 (465)
T KOG2268|consen 232 NIMVKDDDKIVVIDFP 247 (465)
T ss_pred eeEEecCCCEEEeech
Confidence 9999999999999995
No 485
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.13 E-value=0.044 Score=53.20 Aligned_cols=73 Identities=23% Similarity=0.288 Sum_probs=41.0
Q ss_pred CcceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCC---CCCcccceeeeecCCCCceEEE
Q 011995 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDGSDQRMLI 256 (473)
Q Consensus 180 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~~~~lV 256 (473)
.+.|+.|....+|+..- ++ +.+-+|+.. ......|..|.+-|+.|. --.+.+++++.... +.-+||
T Consensus 22 ~~~v~GG~i~~a~~~~~-~~----~~~FvK~~~----~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~--~~~fLl 90 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLDT-DG----GSYFVKVNS----ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYD--DDAFLL 90 (288)
T ss_dssp EEEE--SSSSEEEEEET-TS-----EEEEEEEE----GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-S--SCCEEE
T ss_pred eEecCCCChhheEEEEC-CC----ccEEEEecC----hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeec--CCceEE
Confidence 36788888999999862 21 233355443 233456788888888873 34566788776655 455899
Q ss_pred EEeccCC
Q 011995 257 YERLFHG 263 (473)
Q Consensus 257 ~E~~~~g 263 (473)
|||++.+
T Consensus 91 le~l~~~ 97 (288)
T PF03881_consen 91 LEFLEMG 97 (288)
T ss_dssp EE-----
T ss_pred EEeecCC
Confidence 9999776
No 486
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.08 E-value=0.02 Score=56.32 Aligned_cols=73 Identities=12% Similarity=0.035 Sum_probs=57.1
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeCCCCcEEEeccCC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGC 330 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~vkl~DFGl 330 (473)
...|++|++. |++|.- + ....|.+...++.+.+..++-+..+- +.-|||+.-.||||+ +|++.|+||-+
T Consensus 299 ~y~yl~~kdh-gt~is~-i------k~~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfkl 367 (488)
T COG5072 299 LYLYLHFKDH-GTPISI-I------KADRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFKL 367 (488)
T ss_pred eEEEEEEecC-Cceeee-e------ecccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEeee
Confidence 5566777764 444432 2 12468899999999888888777765 599999999999999 99999999999
Q ss_pred Cccc
Q 011995 331 AGHI 334 (473)
Q Consensus 331 a~~~ 334 (473)
++.-
T Consensus 368 sRl~ 371 (488)
T COG5072 368 SRLS 371 (488)
T ss_pred eecc
Confidence 9854
No 487
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=95.82 E-value=0.15 Score=50.60 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=89.0
Q ss_pred ccCcceeecCCceEEEEEECCCCe-eeeEEEEEEEecCCCCh---h----------------h-HhHHHHHHHHHhCCCC
Q 011995 178 FSDRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSSQ---G----------------V-KEFINDVNTLASLQHP 236 (473)
Q Consensus 178 ~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~~~~~~~~~~~~---~----------------~-~~~~~Ei~~l~~l~Hp 236 (473)
.+..+|..|--+.||.++-.++.. +.|.+.--+..+..-.. + + --...|+.-|.+++.-
T Consensus 147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 344788999999999998665544 33433333322221100 0 0 1124577777777654
Q ss_pred CcccceeeeecCCCCceEEEEEeccCCCh-hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCce
Q 011995 237 NLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANI 315 (473)
Q Consensus 237 nIv~l~g~~~~~~~~~~~lV~E~~~~gsL-~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NI 315 (473)
.|.----+.. ...+|||+|+..... .-.| ....++...+..+-.+++.-+.-|.+.+ .+||.||.--|+
T Consensus 227 GIP~PePIlL----k~hVLVM~FlGrdgw~aPkL----Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~ 296 (520)
T KOG2270|consen 227 GIPCPEPILL----KNHVLVMEFLGRDGWAAPKL----KDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNL 296 (520)
T ss_pred CCCCCCceee----ecceEeeeeccCCCCcCccc----ccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhh
Confidence 4321111111 234799999843221 1111 2335666677788888888888888887 699999999999
Q ss_pred eeCCCCcEEEeccCCCc
Q 011995 316 QIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 316 Ll~~~~~vkl~DFGla~ 332 (473)
|+.. |.+.|+|-+-+.
T Consensus 297 Lyhd-G~lyiIDVSQSV 312 (520)
T KOG2270|consen 297 LYHD-GKLYIIDVSQSV 312 (520)
T ss_pred eEEC-CEEEEEEccccc
Confidence 8864 588999987554
No 488
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.78 E-value=0.12 Score=51.42 Aligned_cols=30 Identities=7% Similarity=0.145 Sum_probs=25.6
Q ss_pred CceeecCCCCCceeeCC-CCcEEEeccCCCc
Q 011995 303 FQAMYNEFSTANIQIDK-DFSAKLSGYGCAG 332 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~-~~~vkl~DFGla~ 332 (473)
..++|+|+.+.|||+++ ++.++++||..|.
T Consensus 182 ~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 182 VVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred eEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 35899999999999975 5789999998764
No 489
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.55 E-value=0.025 Score=52.25 Aligned_cols=29 Identities=34% Similarity=0.424 Sum_probs=20.6
Q ss_pred ceeecCCCCCceee-CCCCcEEEeccCCCc
Q 011995 304 QAMYNEFSTANIQI-DKDFSAKLSGYGCAG 332 (473)
Q Consensus 304 ~ivHrDlkp~NILl-~~~~~vkl~DFGla~ 332 (473)
.++|+|+.+.|||+ +.++.++++||-.+.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 48999999999999 888999999997664
No 490
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.45 E-value=0.49 Score=46.86 Aligned_cols=159 Identities=18% Similarity=0.181 Sum_probs=86.2
Q ss_pred CCHHHHHHHhcccccC-----cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCC--
Q 011995 165 FPLDEVAAACHNFFSD-----RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN-- 237 (473)
Q Consensus 165 ~~~~el~~~~~~f~~~-----~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn-- 237 (473)
+.-.++..+...|..+ ..|.+ .-..||+....++.. .+++.+. . ....++.-|++.|..+.-..
T Consensus 11 ~~~~~~~~~l~~~~~g~~~~~~~l~s-~eN~~f~~~~~~g~~-----iLki~~~--~-~~~~~i~~el~~l~~La~~~i~ 81 (331)
T COG2334 11 LTSDEAAAALEAYHYGLDGSLRGLNS-EENSNFRVQTEDGRY-----ILKIYRP--G-WTRAEIPFELALLQHLAERGIP 81 (331)
T ss_pred cChHHHHHHHHhcCcCcccccccccc-ccCceEEEEecCCCe-----EEEEecC--C-CCHHHHHHHHHHHHHHHHcCCC
Confidence 3444555554444322 34444 456688887655543 2333332 2 45567778888888873222
Q ss_pred -ccc---ceeeeecCCCC--ceEEEEEeccCCChhh-h--------------hhcC----C--C---CCCCCHHH-----
Q 011995 238 -LCK---LLGFHARDGSD--QRMLIYERLFHGSLDR-L--------------IYGR----S--D---GPPIDWNT----- 282 (473)
Q Consensus 238 -Iv~---l~g~~~~~~~~--~~~lV~E~~~~gsL~~-~--------------l~~~----~--~---~~~l~~~~----- 282 (473)
.++ +-|-....-.. ..+-|++|++|..+.. . |+.. . . .....|..
T Consensus 82 v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~ 161 (331)
T COG2334 82 VPAPLPSLDGELLEALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRA 161 (331)
T ss_pred CCCCccCCCcchhhhccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchh
Confidence 222 11211111113 7788899999887762 1 1110 0 0 11233431
Q ss_pred --------HHHHHHHHHHHHHHhhhcC----CC---ceeecCCCCCceeeCCCCc-EEEeccCCCc
Q 011995 283 --------RVKIALCAAQGLTFLHEEG----PF---QAMYNEFSTANIQIDKDFS-AKLSGYGCAG 332 (473)
Q Consensus 283 --------~~~i~~~i~~~L~yLH~~~----~~---~ivHrDlkp~NILl~~~~~-vkl~DFGla~ 332 (473)
......++...+..+.+.- +. .+||+|+.+.|||++.+.. +.++|||-+.
T Consensus 162 ~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 162 LLRLDLVEPEDLRAALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hhhhcccCchhhHHHHHHHHHHHHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 0112334444455444433 22 2999999999999998874 8999999765
No 491
>PLN02756 S-methyl-5-thioribose kinase
Probab=95.36 E-value=0.29 Score=49.70 Aligned_cols=77 Identities=9% Similarity=0.026 Sum_probs=43.7
Q ss_pred cceeecCCceEEEEEECCCCeeeeEEEEEEEecCCC--ChhhHhHHHHHHHHHhCC---CCCcccceeeeecCCCCceEE
Q 011995 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~---HpnIv~l~g~~~~~~~~~~~l 255 (473)
+.||.|....||+....++. .+.+.+....+.... .....+-..|.+.|..+. ..++.+++.++. +..++
T Consensus 38 ~eiggGn~N~VyrV~~~~~s-vVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de----d~~vl 112 (418)
T PLN02756 38 KEVGDGNLNFVYIVVSSSGS-FVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR----TMALI 112 (418)
T ss_pred EEcCCCceeeEEEEEcCCcc-EEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC----CCCEE
Confidence 67899999999998753221 111111111111111 123344455666666653 247778887764 44678
Q ss_pred EEEeccC
Q 011995 256 IYERLFH 262 (473)
Q Consensus 256 V~E~~~~ 262 (473)
+|||+++
T Consensus 113 vME~L~~ 119 (418)
T PLN02756 113 GMRYLEP 119 (418)
T ss_pred EEeecCC
Confidence 9999976
No 492
>PTZ00384 choline kinase; Provisional
Probab=95.15 E-value=0.25 Score=50.12 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=44.5
Q ss_pred cceeecCCceEEEEEECCCCe---eeeEEEEEEEecCCCChhhHhHHHHHHHHHhCCCCCcc-cceeeeecCCCCceEEE
Q 011995 181 RCISEGLSSVMYRASFGDDAS---TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC-KLLGFHARDGSDQRMLI 256 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv-~l~g~~~~~~~~~~~lV 256 (473)
..|..|-...+|++...++.. ..+.+.+.+ ........-.-.+|++++..+...++. ++++.+. -++|
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~--~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~------~g~l 127 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKK--SSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG------DFTI 127 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEe--ccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecC------CEEE
Confidence 455568888999998654321 111121111 111222222335789999999665555 4555442 2599
Q ss_pred EEeccCCChh
Q 011995 257 YERLFHGSLD 266 (473)
Q Consensus 257 ~E~~~~gsL~ 266 (473)
+||++|-.|.
T Consensus 128 ~efIeGr~l~ 137 (383)
T PTZ00384 128 QEWVEGNTMG 137 (383)
T ss_pred EEEeccccCC
Confidence 9999987764
No 493
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.78 E-value=1.3 Score=43.88 Aligned_cols=29 Identities=14% Similarity=0.132 Sum_probs=23.9
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCcc
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAGH 333 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~~ 333 (473)
..+||+|+.+.|||++ + .+.|+||+.+..
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 3589999999999995 4 578999997653
No 494
>PRK12396 5-methylribose kinase; Reviewed
Probab=94.72 E-value=0.1 Score=52.69 Aligned_cols=78 Identities=15% Similarity=0.148 Sum_probs=45.4
Q ss_pred cceeecCCceEEEEEECC-CCeeeeEEEEEEEecCCC-ChhhHhHHHHHHHHHhCC--CC-CcccceeeeecCCCCceEE
Q 011995 181 RCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQ--HP-NLCKLLGFHARDGSDQRML 255 (473)
Q Consensus 181 ~~lG~G~~g~Vy~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~--Hp-nIv~l~g~~~~~~~~~~~l 255 (473)
+.||.|.-..||++.... ......+.+....+...+ .-...+..-|.+.|+.+. -| .+.++|.| +. +...+
T Consensus 35 ~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~--e~~~~ 110 (409)
T PRK12396 35 KEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DS--VMNCC 110 (409)
T ss_pred eEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--Cc--HHhhH
Confidence 578999999999998642 222222222222332211 334566667778887763 34 45556543 33 56678
Q ss_pred EEEeccC
Q 011995 256 IYERLFH 262 (473)
Q Consensus 256 V~E~~~~ 262 (473)
|||+++.
T Consensus 111 vMEdL~~ 117 (409)
T PRK12396 111 VMEDLSD 117 (409)
T ss_pred HHHhCcc
Confidence 9999854
No 495
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.52 E-value=0.2 Score=46.17 Aligned_cols=125 Identities=20% Similarity=0.207 Sum_probs=78.8
Q ss_pred hHhHHHHHHHHHhCCCCCcccceeeeecCCCCceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 011995 220 VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299 (473)
Q Consensus 220 ~~~~~~Ei~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~ 299 (473)
..-|..+..++.+++ .|+++.. ++.-.+-+++|+|..... ... .++..=+..|.-.|+
T Consensus 102 ~~~y~nky~v~Armh--GilrL~N----Dn~~~yGvIlE~Cy~~~i---------------~~~-N~i~agi~~L~~fH~ 159 (308)
T PF07387_consen 102 DALYFNKYRVFARMH--GILRLKN----DNNYKYGVILERCYKIKI---------------NFS-NFITAGIKDLMDFHS 159 (308)
T ss_pred hhhhhhhhhHHHHhh--heeEeec----CCCceeEEEEeeccCccc---------------chh-HHHHHhHHHHHHhhc
Confidence 345678888888775 3777752 233567789998844211 111 122222467888895
Q ss_pred cCCCceeecCCCCCceeeCCCCcEEEeccCCCcccCCCCccCcccccccCChhhhhcCCCCCcCCchHHHHHHHHHHcCC
Q 011995 300 EGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPETDISNSSVAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGR 379 (473)
Q Consensus 300 ~~~~~ivHrDlkp~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~t~~y~aPE~~~~~~~s~~sDvwSlGvvl~elltG~ 379 (473)
.+ .+.+|+|-.|+||+-|..|.+||.|-+.--. + +..|.- + .....+.++.+-+|=.-+++++..+
T Consensus 160 ~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~--~--------~V~~vN-~--~Y~~lT~~aE~~~fv~s~l~~v~~~ 225 (308)
T PF07387_consen 160 EN-QHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE--N--------QVNMVN-I--EYESLTQEAEVKVFVKSCLKLVEKQ 225 (308)
T ss_pred cC-CCeecCCCChhheeecCCCCEEecChhhhhh--h--------eeeEEe-e--eccccChHHHHHHHHHHHHHHHHHH
Confidence 43 2599999999999999999999999874311 0 111111 1 1223567777777777777777654
Q ss_pred C
Q 011995 380 K 380 (473)
Q Consensus 380 ~ 380 (473)
.
T Consensus 226 ~ 226 (308)
T PF07387_consen 226 R 226 (308)
T ss_pred h
Confidence 4
No 496
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=93.42 E-value=0.34 Score=48.70 Aligned_cols=62 Identities=13% Similarity=0.002 Sum_probs=44.5
Q ss_pred CceEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCceeecCCCCCceeeC
Q 011995 251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQID 318 (473)
Q Consensus 251 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlkp~NILl~ 318 (473)
....|+-+|+.|.++..++... ..++..+.+++.-.+.++-.+--.. ..+|.|+.|.||++-
T Consensus 318 ~~~vl~E~~~~Gl~v~~~v~~~----~~pe~l~kkva~lg~~AllkMl~vD--NFvHaDlHPGNVlir 379 (565)
T KOG1236|consen 318 TDLVLVETYERGLSVLRFVKWK----SQPEALVKKVAKLGVNALLKMLIVD--NFVHADLHPGNVLIR 379 (565)
T ss_pred ccceeeeeccccccHHhhhhcc----cChHHHHHHHHHHHHHHHHHHHHhh--cceecccCCCcEEEE
Confidence 3456777889899999888432 3455566777776677765554433 299999999999994
No 497
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.23 E-value=1.6 Score=40.66 Aligned_cols=46 Identities=24% Similarity=0.379 Sum_probs=31.5
Q ss_pred hhHhHHHHHHHHHhCCCC---CcccceeeeecCCCCceEEEEEeccCCChh
Q 011995 219 GVKEFINDVNTLASLQHP---NLCKLLGFHARDGSDQRMLIYERLFHGSLD 266 (473)
Q Consensus 219 ~~~~~~~Ei~~l~~l~Hp---nIv~l~g~~~~~~~~~~~lV~E~~~~gsL~ 266 (473)
...-|..|+.-|..+.-- ++.+++.+ ....++.|+||||++-|.++
T Consensus 51 ~~~~f~AEa~gL~~la~s~ti~VP~vi~~--G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 51 QLSMFTAEADGLELLARSNTITVPKVIAV--GASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred hHHHHHHHHHHHHHHHhcCCccccceEEe--cCCCCeeEEEEeeccCCCCC
Confidence 345678888877777443 44555433 33448899999999987775
No 498
>PRK06148 hypothetical protein; Provisional
Probab=92.90 E-value=1.5 Score=50.40 Aligned_cols=30 Identities=33% Similarity=0.388 Sum_probs=25.2
Q ss_pred ceeecCCCCCceeeCCCC--cEE-EeccCCCcc
Q 011995 304 QAMYNEFSTANIQIDKDF--SAK-LSGYGCAGH 333 (473)
Q Consensus 304 ~ivHrDlkp~NILl~~~~--~vk-l~DFGla~~ 333 (473)
.+||+|+.+.|||++.++ .+. |+|||.+..
T Consensus 204 ~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 204 QVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred ceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 599999999999999875 454 999997754
No 499
>PTZ00296 choline kinase; Provisional
Probab=92.68 E-value=1.5 Score=45.48 Aligned_cols=29 Identities=17% Similarity=0.246 Sum_probs=23.9
Q ss_pred CceeecCCCCCceeeCCCCcEEEeccCCCc
Q 011995 303 FQAMYNEFSTANIQIDKDFSAKLSGYGCAG 332 (473)
Q Consensus 303 ~~ivHrDlkp~NILl~~~~~vkl~DFGla~ 332 (473)
..++|+|+-+.|||.+.++ ++++||-.|.
T Consensus 284 ~VfCHNDl~~~NiL~~~~~-l~LIDfEYAg 312 (442)
T PTZ00296 284 IVFCHNDLQENNIINTNKC-LRLIDFEYSG 312 (442)
T ss_pred eeEEeCCCCccceeecCCC-EEEEeecccc
Confidence 4589999999999987554 9999997654
No 500
>PLN03150 hypothetical protein; Provisional
Probab=92.16 E-value=0.072 Score=57.71 Aligned_cols=40 Identities=13% Similarity=0.174 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCCCCcccccCCcccccCccccccccccccCCCCh
Q 011995 35 EPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSS 78 (473)
Q Consensus 35 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~ls~n~~~~~~~p~~ 78 (473)
.+.+..|+|+|.+|+++.+++.|+.|| |++|+ +.|.+|.+
T Consensus 470 ~LdLs~N~lsg~iP~~l~~L~~L~~L~---Ls~N~-l~g~iP~~ 509 (623)
T PLN03150 470 VLDLSYNSFNGSIPESLGQLTSLRILN---LNGNS-LSGRVPAA 509 (623)
T ss_pred EEECCCCCCCCCCchHHhcCCCCCEEE---CcCCc-ccccCChH
Confidence 344444444444444444444444444 44444 44555544
Done!